Modifier and Type | Method and Description |
---|---|
JIPipeNodeInfo |
JIPipe.NodeInfoRegisteredEvent.getNodeInfo() |
Modifier and Type | Method and Description |
---|---|
Set<JIPipeNodeInfo> |
JIPipeRegistryIssues.getErroneousNodes() |
Modifier and Type | Method and Description |
---|---|
void |
JIPipeDefaultJavaExtension.registerNodeType(JIPipeNodeInfo info)
Registers a new node type.
|
void |
JIPipeDefaultJavaExtension.registerNodeType(JIPipeNodeInfo info,
URL icon)
Registers a new node type.
|
Modifier and Type | Method and Description |
---|---|
void |
JIPipeRegistryIssues.setErroneousNodes(Set<JIPipeNodeInfo> erroneousNodes) |
Constructor and Description |
---|
NodeInfoRegisteredEvent(JIPipeNodeInfo nodeInfo) |
Constructor and Description |
---|
IOInterfaceAlgorithm(JIPipeNodeInfo info)
Creates a new instance.
|
JIPipeCompartmentOutput(JIPipeNodeInfo info)
Creates a new instance.
|
JIPipeProjectCompartment(JIPipeNodeInfo info)
Creates new instance
|
Modifier and Type | Class and Description |
---|---|
class |
JsonNodeInfo
Info of a
GraphWrapperAlgorithm |
Constructor and Description |
---|
GraphWrapperAlgorithm(JIPipeNodeInfo info,
JIPipeGraph wrappedGraph) |
GraphWrapperAlgorithmInput(JIPipeNodeInfo info) |
GraphWrapperAlgorithmOutput(JIPipeNodeInfo info) |
NodeGroup(JIPipeNodeInfo info)
Creates a new instance
|
Constructor and Description |
---|
LoopEndNode(JIPipeNodeInfo info) |
LoopStartNode(JIPipeNodeInfo info) |
Modifier and Type | Class and Description |
---|---|
class |
JIPipeEmptyNodeInfo
An empty algorithm info.
|
class |
JIPipeJavaNodeInfo
JIPipeNodeInfo for an algorithm that is defined in Java code
All necessary properties are extracted from class attributes |
class |
JIPipeMutableNodeInfo
Instantiates
JIPipeGraphNode instances |
Modifier and Type | Method and Description |
---|---|
JIPipeNodeInfo |
JIPipeGraphNode.getInfo()
Returns the
JIPipeNodeInfo that describes this algorithm |
JIPipeNodeInfo |
JIPipeNodeExample.getNodeInfo() |
Modifier and Type | Method and Description |
---|---|
static List<JIPipeNodeInfo> |
JIPipeNodeInfo.getSortedList(Set<JIPipeNodeInfo> entries)
Gets a sorted list of algorithms
|
static Map<String,Set<JIPipeNodeInfo>> |
JIPipeNodeInfo.groupByMenuPaths(JIPipeNodeTypeCategory category,
Set<JIPipeNodeInfo> infos)
Gets the registered algorithms, grouped by their menu paths
|
Modifier and Type | Method and Description |
---|---|
void |
JIPipeGraphNode.setInfo(JIPipeNodeInfo info)
Sets the
JIPipeNodeInfo that describes this algorithm. |
Modifier and Type | Method and Description |
---|---|
static List<JIPipeNodeInfo> |
JIPipeNodeInfo.getSortedList(Set<JIPipeNodeInfo> entries)
Gets a sorted list of algorithms
|
static Map<String,Set<JIPipeNodeInfo>> |
JIPipeNodeInfo.groupByMenuPaths(JIPipeNodeTypeCategory category,
Set<JIPipeNodeInfo> infos)
Gets the registered algorithms, grouped by their menu paths
|
Modifier and Type | Method and Description |
---|---|
JIPipeNodeInfo |
JIPipeNodeRegistry.getInfoById(String id)
Gets a matching info by Id
|
Modifier and Type | Method and Description |
---|---|
<T extends JIPipeData> |
JIPipeNodeRegistry.getDataSourcesFor(Class<? extends T> dataClass)
Returns data source algorithms that can generate the specified data type
|
Set<JIPipeNodeInfo> |
JIPipeNodeRegistry.getDeclaredBy(JIPipeDependency dependency)
Gets all algorithms declared by the dependency
|
Set<JIPipeNodeInfo> |
JIPipeNodeRegistry.getNodeInfosFromClass(Class<? extends JIPipeGraphNode> klass)
Returns all node infos that create a node of the specified class
|
Set<JIPipeNodeInfo> |
JIPipeNodeRegistry.getNodesOfCategory(JIPipeNodeTypeCategory category,
boolean includingAlternative)
Gets all algorithms of specified category
|
Multimap<Class<? extends JIPipeGraphNode>,JIPipeNodeInfo> |
JIPipeNodeRegistry.getRegisteredNodeClasses() |
Map<String,JIPipeNodeInfo> |
JIPipeNodeRegistry.getRegisteredNodeInfos()
Gets the set of all known algorithms
|
Modifier and Type | Method and Description |
---|---|
ImageIcon |
JIPipeNodeRegistry.getIconFor(JIPipeNodeInfo info)
Returns the icon for a node
|
URL |
JIPipeNodeRegistry.getIconURLFor(JIPipeNodeInfo info)
Returns the icon resource path URL for a node
|
void |
JIPipeNodeRegistry.register(JIPipeNodeInfo info,
JIPipeDependency source)
Registers an algorithm info
|
void |
JIPipeNodeRegistry.registerIcon(JIPipeNodeInfo info,
URL resourcePath)
Registers a custom icon for a node
|
Constructor and Description |
---|
AnnotationTableFromFile(JIPipeNodeInfo info) |
Constructor and Description |
---|
CellposeAlgorithm(JIPipeNodeInfo info) |
CellposeTrainingAlgorithm(JIPipeNodeInfo info) |
ImportCellposeModelAlgorithm(JIPipeNodeInfo info) |
ImportCellposeSizeModelAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
CellposeAlgorithm_Old(JIPipeNodeInfo info)
Deprecated.
|
CellposeTrainingAlgorithm_Old(JIPipeNodeInfo info)
Deprecated.
|
Modifier and Type | Class and Description |
---|---|
class |
CLIJCommandNodeInfo |
Constructor and Description |
---|
CLIJCommandNode(JIPipeNodeInfo info) |
Constructor and Description |
---|
Clij2ExecuteKernelIterating(JIPipeNodeInfo info) |
Clij2ExecuteKernelSimpleIterating(JIPipeNodeInfo info) |
Clij2PullAlgorithm(JIPipeNodeInfo info) |
Clij2PushAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
JIPipeCommentNode(JIPipeNodeInfo info) |
Constructor and Description |
---|
DownloadFilesDataSource(JIPipeNodeInfo info) |
FileDataSource(JIPipeNodeInfo info)
Initializes the algorithm
|
FileListDataSource(JIPipeNodeInfo info)
Initializes the algorithm
|
FolderDataSource(JIPipeNodeInfo info)
Initializes the algorithm
|
FolderListDataSource(JIPipeNodeInfo info)
Creates a new instance
|
OutputFolderDataSource(JIPipeNodeInfo info) |
PathDataSource(JIPipeNodeInfo info)
Initializes the algorithm
|
PathFromUserDataSource(JIPipeNodeInfo info) |
PathListDataSource(JIPipeNodeInfo info)
Creates a new instance
|
TemporaryFileDataSource(JIPipeNodeInfo info) |
TemporaryFolderDataSource(JIPipeNodeInfo info) |
Constructor and Description |
---|
BooleanFormGeneratorAlgorithm(JIPipeNodeInfo info) |
DoubleFormGeneratorAlgorithm(JIPipeNodeInfo info) |
EnumFormGeneratorAlgorithm(JIPipeNodeInfo info) |
FormGeneratorAlgorithm(JIPipeNodeInfo info) |
GroupHeaderFormGeneratorAlgorithm(JIPipeNodeInfo info) |
IntegerFormGeneratorAlgorithm(JIPipeNodeInfo info) |
IteratingFormProcessorAlgorithm(JIPipeNodeInfo info) |
MergingFormProcessorAlgorithm(JIPipeNodeInfo info) |
PathFormGeneratorAlgorithm(JIPipeNodeInfo info) |
SimpleFormGeneratorAlgorithm(JIPipeNodeInfo info,
FormData formData)
Constructor for a new
SimpleFormGeneratorAlgorithm . |
SimpleIteratingFormProcessorAlgorithm(JIPipeNodeInfo info) |
StringFormGeneratorAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
MultiTemplateMatchingAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
ConvertSpotsToRoiNode(JIPipeNodeInfo info) |
ConvertTracksToRoiNode(JIPipeNodeInfo info) |
Modifier and Type | Class and Description |
---|---|
class |
CreateSpotDetectorNodeInfo |
class |
CreateSpotTrackerNodeInfo |
Constructor and Description |
---|
CreateSpotDetectorNode(JIPipeNodeInfo info) |
CreateSpotTrackerNode(JIPipeNodeInfo info) |
Constructor and Description |
---|
MeasureSpotsNode(JIPipeNodeInfo info) |
MergeSpotsNode(JIPipeNodeInfo info) |
SplitSpotsNode(JIPipeNodeInfo info) |
SpotDetectorNode(JIPipeNodeInfo info) |
SpotFilterNode(JIPipeNodeInfo info) |
SpotsToRGBNode(JIPipeNodeInfo info) |
Constructor and Description |
---|
FollowSpotsPerTrackNode(JIPipeNodeInfo info) |
MeasureBranchesNode(JIPipeNodeInfo info) |
MeasureEdgesNode(JIPipeNodeInfo info) |
MeasureTracksNode(JIPipeNodeInfo info) |
MergeTracksNode(JIPipeNodeInfo info) |
SplitTracksNode(JIPipeNodeInfo info) |
TrackFilterNode(JIPipeNodeInfo info) |
TrackingNode(JIPipeNodeInfo info) |
TrackSchemeRendererNode(JIPipeNodeInfo info) |
TracksToRGBNode(JIPipeNodeInfo info) |
Constructor and Description |
---|
ImportWekaModelFromFileAlgorithm(JIPipeNodeInfo info) |
WekaClassification2DAlgorithm(JIPipeNodeInfo info) |
WekaClassification3DAlgorithm(JIPipeNodeInfo info) |
WekaTrainingLabels2DAlgorithm(JIPipeNodeInfo info) |
WekaTrainingMask2DAlgorithm(JIPipeNodeInfo info) |
WekaTrainingROI2DAlgorithm(JIPipeNodeInfo info) |
WekaTrainingROI3DAlgorithm(JIPipeNodeInfo info) |
Modifier and Type | Class and Description |
---|---|
class |
ImageJ2OpNodeInfo
A
JIPipeNodeInfo implementation that reads its information from an ImageJ2 Command |
Constructor and Description |
---|
ImageJ2OpNode(JIPipeNodeInfo info) |
Constructor and Description |
---|
CreateIJ2OutOfBoundsFactoryAlgorithm(JIPipeNodeInfo info) |
CreateIJ2ShapeAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
MacroWrapperAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
AnalyzeSkeleton2D3DAlgorithm(JIPipeNodeInfo info) |
AnnotateByImageStatisticsExpressionAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
FindParticles2D(JIPipeNodeInfo info) |
ImageStatisticsAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
ImageStatisticsExpressionAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
Constructor and Description |
---|
RollingBallBackgroundEstimator2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
Constructor and Description |
---|
BoxFilter2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
BoxFilter3DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
GaussianBlur2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
GaussianBlur3DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
MedianBlurFilter2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
MedianBlurFilter3DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
MedianBlurGreyscale8U2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
MedianBlurRGB2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
Constructor and Description |
---|
DrawScaleBarAlgorithm(JIPipeNodeInfo info) |
SetPhysicalDimensionsAlgorithm(JIPipeNodeInfo info) |
SetPhysicalDimensionsByAnnotationsAlgorithm(JIPipeNodeInfo info) |
SetPhysicalDimensionsByExpressionsAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
Coloc2Node(JIPipeNodeInfo info) |
Constructor and Description |
---|
ArrangeChannelsAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
BlendImagesAlgorithm(JIPipeNodeInfo info) |
ColorToGreyscaleExpression2D(JIPipeNodeInfo info) |
CombineChannelsToRGBAlgorithm(JIPipeNodeInfo info) |
InvertColorsAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
MergeChannelsAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
NewSplitChannelsAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
OverlayImagesAlgorithm(JIPipeNodeInfo info)
Deprecated.
|
RenderImageToRGBAlgorithm(JIPipeNodeInfo info) |
SetToColorAlgorithm(JIPipeNodeInfo info) |
SetToValueAlgorithm(JIPipeNodeInfo info) |
SplitChannelsAlgorithm(JIPipeNodeInfo info)
Deprecated.
Instantiates a new node type.
|
SplitRGBChannelsAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
CLAHEContrastEnhancer(JIPipeNodeInfo info) |
HistogramContrastEnhancerAlgorithm(JIPipeNodeInfo info) |
IlluminationCorrection2DAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
ConvertImageAlgorithm(JIPipeNodeInfo info) |
ConvertImageTo16BitAlgorithm(JIPipeNodeInfo info) |
ConvertImageTo32BitAlgorithm(JIPipeNodeInfo info) |
ConvertImageTo8BitAlgorithm(JIPipeNodeInfo info) |
ConvertImageToHSBAlgorithm(JIPipeNodeInfo info) |
ConvertImageToLABAlgorithm(JIPipeNodeInfo info) |
ImageToMatrixAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
ImageToTableAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
MatrixToImageAlgorithm(JIPipeNodeInfo info) |
TableToImageAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
ConvolveByImage2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
ConvolveByParameter2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
Constructor and Description |
---|
ImageStackFromFolder(JIPipeNodeInfo info) |
OMEImageFromImagePlus(JIPipeNodeInfo info) |
Constructor and Description |
---|
CannyEdgeDetectorAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
LaplacianEdgeDetectorAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
SobelEdgeDetectorAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
Constructor and Description |
---|
DifferenceOfGaussian2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
DirectionalFilter2DAlgorithm(JIPipeNodeInfo info) |
FrangiVesselnessFeatures(JIPipeNodeInfo info) |
LaplacianOfGaussian2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
LocalMaxima2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
MeijeringVesselness2DFeatures(JIPipeNodeInfo info) |
Constructor and Description |
---|
FFT2DForwardTransform(JIPipeNodeInfo info)
Creates a new instance
|
FFT2DInverseTransform(JIPipeNodeInfo info)
Creates a new instance
|
FFT2DSwapQuadrants(JIPipeNodeInfo info)
Creates a new instance
|
Constructor and Description |
---|
DrawMaskAlgorithm(JIPipeNodeInfo info) |
DrawROIAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
GenerateLUTImageFromColorMap(JIPipeNodeInfo info)
Instantiates a new node type.
|
GenerateMissingImageFromMathExpression2D(JIPipeNodeInfo info)
Instantiates a new node type.
|
GenerateMissingTablesAlgorithm(JIPipeNodeInfo info) |
GenerateMissingZeroImage(JIPipeNodeInfo info)
Instantiates a new node type.
|
GenerateStructureElement2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
GenerateStructureElement3DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
GenerateZeroImage(JIPipeNodeInfo info)
Instantiates a new node type.
|
ImageFromMatrix2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
Constructor and Description |
---|
ExportImage2Algorithm(JIPipeNodeInfo info) |
ExportImageAlgorithm(JIPipeNodeInfo info) |
ExportROIAlgorithm(JIPipeNodeInfo info) |
ExportTableAlgorithm(JIPipeNodeInfo info) |
ExportTableAsXLSXAlgorithm(JIPipeNodeInfo info) |
ImagePlusFromGUI(JIPipeNodeInfo info) |
ImagePlusToGUI(JIPipeNodeInfo info) |
ResultsTableFromGUI(JIPipeNodeInfo info) |
ResultsTableToGUI(JIPipeNodeInfo info) |
ROIFromGUI(JIPipeNodeInfo info) |
ROIToGUI(JIPipeNodeInfo info) |
RunImageJExporterAlgorithm(JIPipeNodeInfo info) |
RunImageJImporterAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
AnnotateWithOverlapMeasureLabelsAlgorithm(JIPipeNodeInfo info) |
CropLabelsAlgorithm(JIPipeNodeInfo info) |
DilateLabelsAlgorithm(JIPipeNodeInfo info) |
ExpandLabelsAlgorithm(JIPipeNodeInfo info) |
ExtractLabelStatisticsAlgorithm(JIPipeNodeInfo info) |
GetLabelBoundariesAlgorithm(JIPipeNodeInfo info) |
KeepLargestLabelAlgorithm(JIPipeNodeInfo info) |
LabelsToRGBAlgorithm(JIPipeNodeInfo info) |
LabelsToROIAlgorithm(JIPipeNodeInfo info) |
MergeLabelsAlgorithm(JIPipeNodeInfo info) |
MergeSmallLabelsAlgorithm(JIPipeNodeInfo info) |
OverlapMeasureLabelsAlgorithm(JIPipeNodeInfo info) |
RemapLabelsAlgorithm(JIPipeNodeInfo info) |
ReplaceLabelsAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
FilterLabelsByExpression2DAlgorithm(JIPipeNodeInfo info) |
FilterLabelsByExpression3DAlgorithm(JIPipeNodeInfo info) |
FilterLabelsByIdAlgorithm(JIPipeNodeInfo info) |
FilterLabelsByMaskAlgorithm(JIPipeNodeInfo info) |
FilterLabelsByOverlapAlgorithm(JIPipeNodeInfo info) |
FilterLabelsByStatisticsAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
RemoveBorderLabelsAlgorithm(JIPipeNodeInfo info) |
RemoveLargestLabelAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
ApplyLUTAlgorithm(JIPipeNodeInfo info) |
LUTInverterAlgorithm(JIPipeNodeInfo info) |
RemoveLUTAlgorithm(JIPipeNodeInfo info) |
SetLUTFromColorMapAlgorithm(JIPipeNodeInfo info) |
SetLUTFromColorsAlgorithm(JIPipeNodeInfo info) |
SetLUTFromImageAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
ApplyDistanceTransform2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
ChamferDistanceMap2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
ChamferDistanceMap3DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
GeodesicDistanceMap2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
LabelChamferDistanceMap3DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
Constructor and Description |
---|
DataToPreviewAlgorithm(JIPipeNodeInfo info) |
RenderJIPipeProjectAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
AddNoise2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
AddSaltAndPepperNoise2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
DespeckleFilter2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
RemoveOutliersFilter2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
Constructor and Description |
---|
MSEBlockFlowAlgorithm(JIPipeNodeInfo info) |
MSEGaussianFlowAlgorithm(JIPipeNodeInfo info) |
PMCCBlockFlowAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
ExtractOverlayAlgorithm(JIPipeNodeInfo info) |
RemoveOverlayAlgorithm(JIPipeNodeInfo info) |
RenderOverlayAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
SetOverlayAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
CropToRoiAlgorithm(JIPipeNodeInfo info) |
ExtractImageInRoiAlgorithm(JIPipeNodeInfo info) |
GetRoiImageAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
RoiCalculatorAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
SetRoiImageAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
SplitRoiConnectedComponentsAlgorithm(JIPipeNodeInfo info) |
UnsetRoiImageAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
Constructor and Description |
---|
RoiPropertiesToAnnotationsAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
AssembleExtractedROIAlgorithm(JIPipeNodeInfo info) |
ExtractFromROIAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
ROIToLabelsByNameAlgorithm(JIPipeNodeInfo info) |
ROIToLabelsExpressionAlgorithm(JIPipeNodeInfo info) |
RoiToMaskAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
RoiToRGBAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
UnreferencedRoiToMaskAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
UnreferencedRoiToRGBAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
Constructor and Description |
---|
DrawOvalRoiAlgorithm(JIPipeNodeInfo info) |
DrawRectangleRoiAlgorithm(JIPipeNodeInfo info) |
DrawScaleBarRoiAlgorithm(JIPipeNodeInfo info) |
DrawTextRoiAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
FilterRoiByNameAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
FilterROIByOverlapAlgorithm(JIPipeNodeInfo info) |
FilterRoiByStatisticsAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
FilterRoiByStatisticsScriptAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
FilterROIListsAlgorithm(JIPipeNodeInfo info) |
RemoveBorderRoisAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
SliceROIListAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
Constructor and Description |
---|
AppendRectangularRoiAlgorithm(JIPipeNodeInfo info)
Deprecated.
Instantiates a new node type.
|
DefineRectangularRoiAlgorithm(JIPipeNodeInfo info)
Deprecated.
Instantiates a new node type.
|
GenerateMissingRoiListsAlgorithm(JIPipeNodeInfo info) |
MaskToRoiAlgorithm(JIPipeNodeInfo info) |
ReferencedAppendRectangularRoiAlgorithm(JIPipeNodeInfo info)
Deprecated.
Instantiates a new node type.
|
ReferencedDefineRectangularRoiAlgorithm(JIPipeNodeInfo info)
Deprecated.
Instantiates a new node type.
|
TableToCircularROIAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
TableToRectangularROIAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
Constructor and Description |
---|
CountROIAlgorithm(JIPipeNodeInfo info) |
RoiStatisticsAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
Constructor and Description |
---|
AddRoiListsAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
FilterAndMergeRoiByStatisticsScriptAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
MergeRoiListsAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
Constructor and Description |
---|
ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm(JIPipeNodeInfo info) |
ChangeRoiPropertiesAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
ChangeRoiPropertiesFromAnnotationsAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
ChangeRoiPropertiesFromExpressionsAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
ColorRoiByNameAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
ColorRoiByStatisticsAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
OutlineRoiAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
ReorderRoiDimensionsAlgorithm(JIPipeNodeInfo info) |
RoiFloodFillAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
RoiToCentroidAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
ScaleRoiAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
Constructor and Description |
---|
ExtractROIMetadataAlgorithm(JIPipeNodeInfo info) |
RemoveROIMetadataAlgorithm(JIPipeNodeInfo info) |
SetRoiMetadataByStatisticsAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
SetROIMetadataFromTableAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
SortAndExtractRoiByStatisticsAlgorithm(JIPipeNodeInfo info)
Deprecated.
Instantiates a new node type.
|
SortAndExtractRoiByStatisticsAlgorithm2(JIPipeNodeInfo info)
Instantiates a new node type.
|
SortRoiListByExpressionsAndMeasurementsAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
ExplodeRoiAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
SplitRoiAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
Constructor and Description |
---|
ClassicWatershedSegmentationAlgorithm(JIPipeNodeInfo info) |
RidgeDetector2DAlgorithm(JIPipeNodeInfo info) |
SeededWatershedSegmentationAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
LaplacianSharpen2DAlgorithm(JIPipeNodeInfo info)
Instantiates a new node type.
|
Constructor and Description |
---|
AverageKeyValueThresholdStatisticsGenerator(JIPipeNodeInfo info) |
FastKeyValueThresholdStatisticsGenerator(JIPipeNodeInfo info) |
HistogramGenerator(JIPipeNodeInfo info)
Creates a new instance
|
KeyValueAveragesGenerator(JIPipeNodeInfo info) |
KeyValueHistogramGenerator(JIPipeNodeInfo info) |
KeyValueThresholdPartitionAveragesGenerator(JIPipeNodeInfo info) |
KeyValueThresholdPartitionGenerator(JIPipeNodeInfo info) |
KeyValueThresholdStatisticsGenerator(JIPipeNodeInfo info) |
Constructor and Description |
---|
ColorThresholdExpression2D(JIPipeNodeInfo info) |
ManualHSBThreshold2DAlgorithm(JIPipeNodeInfo info) |
ManualLABThreshold2DAlgorithm(JIPipeNodeInfo info) |
ManualRGBThreshold2DAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
IterativeThresholdByROIStatistics2DAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
BernsenLocalAutoThreshold2DAlgorithm(JIPipeNodeInfo info) |
ContrastLocalAutoThreshold2DAlgorithm(JIPipeNodeInfo info) |
LocalAutoThreshold2DAlgorithm(JIPipeNodeInfo info) |
NiblackLocalAutoThreshold2DAlgorithm(JIPipeNodeInfo info) |
PhansalkarLocalAutoThreshold2DAlgorithm(JIPipeNodeInfo info) |
SauvolaLocalAutoThreshold2DAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
SimpleImageAndRoiIteratingAlgorithm(JIPipeNodeInfo info,
Class<? extends ImagePlusData> inputClass,
Class<? extends ImagePlusData> outputClass,
String outputInheritance,
Map<Class<? extends JIPipeData>,Class<? extends JIPipeData>> inheritanceConversions) |
Constructor and Description |
---|
BioFormatsExporter(JIPipeNodeInfo info) |
DisplayRangeCalibrationAlgorithm(JIPipeNodeInfo info) |
ImagePropertiesToAnnotationAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
ImageTypeConverter(JIPipeNodeInfo info)
Creates a new instance
|
SetBioFormatsExporterSettings(JIPipeNodeInfo info) |
Constructor and Description |
---|
ColorSpaceConverterAlgorithm(JIPipeNodeInfo info,
Class<? extends ImagePlusData> outputDataType) |
ToHSBColorSpaceConverterAlgorithm(JIPipeNodeInfo info) |
ToLABColorSpaceConverterAlgorithm(JIPipeNodeInfo info) |
ToRGBColorSpaceConverterAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
BioFormatsImporter(JIPipeNodeInfo info) |
ImagePlusFromFile(JIPipeNodeInfo info) |
ImportLUTAsRGBFromFile(JIPipeNodeInfo info) |
ResultsTableFromFile(JIPipeNodeInfo info) |
ROIDataFromFile(JIPipeNodeInfo info) |
ROIDataFromOMEImage(JIPipeNodeInfo info) |
Constructor and Description |
---|
AnnotationsToParametersAlgorithm(JIPipeNodeInfo info) |
ConvertParametersToTableAlgorithm(JIPipeNodeInfo info) |
DefineParametersAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
DefineParametersTableAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
ExtractParametersAlgorithm(JIPipeNodeInfo info) |
GenerateParametersFromExpressionAlgorithm(JIPipeNodeInfo info) |
MergeParametersAlgorithm(JIPipeNodeInfo info) |
ParametersToAnnotationsAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
DownloadOMEROImageAlgorithm(JIPipeNodeInfo info) |
DownloadOMEROTableAlgorithm(JIPipeNodeInfo info) |
UploadOMEROImageAlgorithm(JIPipeNodeInfo info) |
UploadOMEROTableAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
OMERODatasetReferenceDataSource(JIPipeNodeInfo info) |
OMEROFindDatasetAlgorithm(JIPipeNodeInfo info) |
OMEROFindGroupAlgorithm(JIPipeNodeInfo info) |
OMEROFindImageAlgorithm(JIPipeNodeInfo info) |
OMEROFindProjectAlgorithm(JIPipeNodeInfo info) |
OMEROGroupReferenceDataSource(JIPipeNodeInfo info) |
OMEROImageReferenceDataSource(JIPipeNodeInfo info) |
OMEROProjectReferenceDataSource(JIPipeNodeInfo info) |
Constructor and Description |
---|
OmniposeAlgorithm(JIPipeNodeInfo info) |
OmniposeTrainingAlgorithm(JIPipeNodeInfo info) |
Modifier and Type | Method and Description |
---|---|
JIPipeNodeInfo |
JIPipeNodeInfoRef.getInfo() |
Modifier and Type | Method and Description |
---|---|
void |
JIPipeNodeInfoRef.setInfo(JIPipeNodeInfo info) |
Constructor and Description |
---|
JIPipeNodeInfoRef(JIPipeNodeInfo info) |
Modifier and Type | Class and Description |
---|---|
class |
PlotTables2AlgorithmInfo |
Constructor and Description |
---|
PlotTablesAlgorithm(JIPipeNodeInfo info)
Deprecated.
Creates a new instance
|
Constructor and Description |
---|
IteratingJythonScriptAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
IteratingPythonScriptAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
JythonScriptAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
MergingJythonScriptAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
MergingPythonScriptAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
PythonScriptAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
SimpleIteratingJythonScriptAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
Constructor and Description |
---|
ImportRDatasetAlgorithm(JIPipeNodeInfo info) |
IteratingRScriptAlgorithm(JIPipeNodeInfo info) |
MergingRScriptAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
StringDefinitionDataSource(JIPipeNodeInfo info) |
Constructor and Description |
---|
DefineTablesAlgorithm(JIPipeNodeInfo info) |
GenerateColumnAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
GenerateTableFromExpressionAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
IntegrateColumnsAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
ModifyAndMergeTablesScript(JIPipeNodeInfo info) |
ModifyTableColumnNamesAlgorithm(JIPipeNodeInfo info) |
ModifyTablesScript(JIPipeNodeInfo info) |
TablesFromScript(JIPipeNodeInfo info) |
Constructor and Description |
---|
AddAnnotationColumnsAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
AnnotateByTablePropertiesAlgorithm(JIPipeNodeInfo info) |
AnnotateDataWithTableValues(JIPipeNodeInfo info) |
ConvertAnnotationTableToAnnotatedTables(JIPipeNodeInfo info)
Creates a new instance
|
Constructor and Description |
---|
ApplyExpressionToColumnsAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
ColumnsToAnnotationsAlgorithm(JIPipeNodeInfo info) |
ColumnToNumericAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
ColumnToStringAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
ConvertColumnsAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
RemoveColumnAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
RenameSingleColumnsAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
RenameTableColumnsAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
RenameTableColumnsToAnnotationAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
SortTableColumnsAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
Constructor and Description |
---|
FilterTableRowsAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
FilterTablesAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
SliceTableRowsAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
MergeColumnsAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
MergeTableColumnsSimpleAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
MergeTableColumnsSupplementAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
MergeTableRowsAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
Constructor and Description |
---|
AddMissingRowsInSeriesAlgorithm(JIPipeNodeInfo info) |
ApplyExpressionPerRowAlgorithm(JIPipeNodeInfo info) |
SortTableRowsAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
Constructor and Description |
---|
SplitTableByColumnsAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
SplitTableIntoColumnsAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
SplitTableIntoRowsAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
Constructor and Description |
---|
HistogramAlgorithm(JIPipeNodeInfo info) |
MeltTableAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
UnMeltTableAlgorithm(JIPipeNodeInfo info)
Creates a new instance
|
Constructor and Description |
---|
ConverterAlgorithm(JIPipeNodeInfo info) |
DataBatchSlicer(JIPipeNodeInfo info) |
DataSlicer(JIPipeNodeInfo info) |
ImportJIPipeSlotFolderAlgorithm(JIPipeNodeInfo info) |
RunExpressionAlgorithm(JIPipeNodeInfo info) |
SelectDataTableRowsAlgorithm(JIPipeNodeInfo info) |
SetVirtualStateAlgorithm(JIPipeNodeInfo info) |
SleepAlgorithm(JIPipeNodeInfo info) |
SortRowsByAnnotationsAlgorithm(JIPipeNodeInfo info) |
SortRowsByExpressionAlgorithm(JIPipeNodeInfo info) |
ToDataStringAlgorithm(JIPipeNodeInfo info) |
UsePlaceholderForMissingDataAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
AnnotateWithDataTableProperties(JIPipeNodeInfo info) |
ExtractTableAlgorithm(JIPipeNodeInfo info) |
MergeDataToTableAlgorithm(JIPipeNodeInfo info) |
PullDataTableAnnotations(JIPipeNodeInfo info) |
PushDataTableAnnotations(JIPipeNodeInfo info) |
Constructor and Description |
---|
DistributeDataRandomlyByCountAlgorithm(JIPipeNodeInfo info) |
DistributeDataRandomlyByPercentageAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
GetJIPipeSlotFolderAlgorithm(JIPipeNodeInfo info) |
JIPipeProjectParameterDefinition(JIPipeNodeInfo info) |
PathsToJIPipeProjectParametersAlgorithm(JIPipeNodeInfo info) |
RunJIPipeProjectAlgorithm(JIPipeNodeInfo info) |
Constructor and Description |
---|
RunProcessIteratingAlgorithm(JIPipeNodeInfo info) |
RunProcessMergingAlgorithm(JIPipeNodeInfo info) |
Modifier and Type | Method and Description |
---|---|
static List<JIPipeNodeInfo> |
JIPipeAlgorithmTargetFinderUI.findCompatibleTargetAlgorithms(JIPipeDataSlot slot)
Finds all algorithms that fit to the slot according to the information in
JIPipeNodeInfo |
static List<JIPipeNodeInfo> |
JIPipeAlgorithmSourceFinderUI.findCompatibleTargetAlgorithms(JIPipeDataSlot slot)
Finds all algorithms that fit to the slot according to the information in
JIPipeNodeInfo |
Constructor and Description |
---|
JIPipeAlgorithmSourceFinderAlgorithmUI(JIPipeGraphCanvasUI canvasUI,
JIPipeDataSlot inputSlot,
JIPipeNodeInfo info)
Creates an algorithm UI for one target algorithm
|
JIPipeAlgorithmTargetFinderAlgorithmUI(JIPipeGraphCanvasUI canvasUI,
JIPipeDataSlot outputSlot,
JIPipeNodeInfo info)
Creates an algorithm UI for one target algorithm
|
Modifier and Type | Method and Description |
---|---|
JIPipeNodeInfo |
RunSingleAlgorithmSettingsPanel.getNodeInfo() |
Constructor and Description |
---|
RunSingleAlgorithmSettingsPanel(JIPipeWorkbench workbench,
JIPipeNodeInfo nodeInfo) |
RunSingleAlgorithmWindow(Context context,
JIPipeNodeInfo selectedNode) |
Modifier and Type | Method and Description |
---|---|
JIPipeNodeInfo |
JIPipeNodeInfoPicker.NodeSelectedEvent.getInfo() |
JIPipeNodeInfo |
JIPipeNodeInfoPicker.AlgorithmDeselectedEvent.getInfo() |
Modifier and Type | Method and Description |
---|---|
Set<JIPipeNodeInfo> |
JIPipeNodeInfoPicker.getSelectedInfos() |
static Set<JIPipeNodeInfo> |
JIPipeNodeInfoPicker.showDialog(Component parent,
JIPipeNodeInfoPicker.Mode mode,
Set<JIPipeNodeInfo> availableAlgorithms)
Shows a dialog to pick nodes
|
Modifier and Type | Method and Description |
---|---|
Component |
JIPipeNodeInfoPicker.Renderer.getListCellRendererComponent(JList<? extends JIPipeNodeInfo> list,
JIPipeNodeInfo value,
int index,
boolean isSelected,
boolean cellHasFocus) |
Modifier and Type | Method and Description |
---|---|
Component |
JIPipeNodeInfoPicker.Renderer.getListCellRendererComponent(JList<? extends JIPipeNodeInfo> list,
JIPipeNodeInfo value,
int index,
boolean isSelected,
boolean cellHasFocus) |
void |
JIPipeNodeInfoPicker.setSelectedInfos(Set<JIPipeNodeInfo> nodeInfos) |
static Set<JIPipeNodeInfo> |
JIPipeNodeInfoPicker.showDialog(Component parent,
JIPipeNodeInfoPicker.Mode mode,
Set<JIPipeNodeInfo> availableAlgorithms)
Shows a dialog to pick nodes
|
Constructor and Description |
---|
AlgorithmDeselectedEvent(JIPipeNodeInfoPicker picker,
JIPipeNodeInfo info) |
NodeSelectedEvent(JIPipeNodeInfoPicker picker,
JIPipeNodeInfo info) |
Constructor and Description |
---|
JIPipeNodeInfoPicker(JIPipeNodeInfoPicker.Mode mode,
Set<JIPipeNodeInfo> availableInfos) |
Modifier and Type | Method and Description |
---|---|
Component |
JIPipeNodeInfoListCellRenderer.getListCellRendererComponent(JList<? extends JIPipeNodeInfo> list,
JIPipeNodeInfo info,
int index,
boolean isSelected,
boolean cellHasFocus) |
Modifier and Type | Method and Description |
---|---|
Component |
JIPipeNodeInfoListCellRenderer.getListCellRendererComponent(JList<? extends JIPipeNodeInfo> list,
JIPipeNodeInfo info,
int index,
boolean isSelected,
boolean cellHasFocus) |
Modifier and Type | Method and Description |
---|---|
protected List<JIPipeNodeInfo> |
JIPipeAlgorithmCompendiumUI.getFilteredItems() |
protected ListCellRenderer<JIPipeNodeInfo> |
JIPipeAlgorithmCompendiumUI.getItemListRenderer() |
Modifier and Type | Method and Description |
---|---|
MarkdownDocument |
JIPipeAlgorithmCompendiumUI.generateCompendiumFor(JIPipeNodeInfo info,
boolean forJava) |
Modifier and Type | Method and Description |
---|---|
protected List<JIPipeNodeInfo> |
ExtensionAlgorithmCompendiumUI.getFilteredItems() |
Modifier and Type | Method and Description |
---|---|
static void |
JIPipePipelineGraphEditorUI.initializeAddDataSourceMenu(JIPipeGraphEditorUI graphEditorUI,
JMenu menu,
Set<JIPipeNodeInfo> addedAlgorithms)
Initializes a menu that adds data sources
|
static void |
JIPipePipelineGraphEditorUI.initializeAddNodesMenus(JIPipeGraphEditorUI graphEditorUI,
JMenuBar menuBar,
Set<JIPipeNodeInfo> addedAlgorithms)
Initializes the "Add nodes" menus
|
static void |
JIPipePipelineGraphEditorUI.initializeMenuForCategory(JIPipeGraphEditorUI graphEditorUI,
JMenu menu,
JIPipeNodeTypeCategory category,
Set<JIPipeNodeInfo> addedAlgorithms)
Initializes a menu for one algorithm category
|
Modifier and Type | Method and Description |
---|---|
Set<JIPipeNodeInfo> |
JIPipeGraphEditorUI.getAddableAlgorithms() |
Modifier and Type | Method and Description |
---|---|
void |
JIPipeGraphEditorUI.setAddableAlgorithms(Set<JIPipeNodeInfo> addableAlgorithms) |
Modifier and Type | Method and Description |
---|---|
JIPipeNodeInfo |
NodeContextActionWrapperUIContextAction.getNodeInfo() |
Constructor and Description |
---|
NodeContextActionWrapperUIContextAction(JIPipeNodeInfo nodeInfo,
String name,
String description,
Icon icon,
Method method) |
Modifier and Type | Method and Description |
---|---|
static MarkdownDocument |
TooltipUtils.getAlgorithmDocumentation(JIPipeNodeInfo info) |
static String |
TooltipUtils.getAlgorithmTooltip(JIPipeNodeInfo info)
Creates a tooltip for an algorithm.
|
static String |
TooltipUtils.getAlgorithmTooltip(JIPipeNodeInfo info,
boolean withTitle)
Creates a tooltip for an algorithm
|
static Color |
UIUtils.getBorderColorFor(JIPipeNodeInfo info)
Returns a border color for
JIPipeNodeInfo |
static Color |
UIUtils.getFillColorFor(JIPipeNodeInfo info)
Returns a fill color for
JIPipeNodeInfo |
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