org.hkijena.jipipe.extensions.imagejalgorithms.ij1.calibration

Class SetPhysicalDimensionsByExpressionsAlgorithm

java.lang.Object

org.hkijena.jipipe.api.nodes.JIPipeGraphNode

org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

org.hkijena.jipipe.api.nodes.JIPipeParameterSlotAlgorithm

org.hkijena.jipipe.api.nodes.JIPipeSimpleIteratingAlgorithm

org.hkijena.jipipe.extensions.imagejalgorithms.ij1.calibration.SetPhysicalDimensionsByExpressionsAlgorithm

All Implemented Interfaces:

JIPipeValidatable, JIPipeAdaptiveParametersAlgorithm, JIPipeDataBatchAlgorithm, JIPipeParallelizedAlgorithm, JIPipeParameterCollection

public class SetPhysicalDimensionsByExpressionsAlgorithm
extends JIPipeSimpleIteratingAlgorithm

Nested Class Summary

Nested classes/interfaces inherited from class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

JIPipeAlgorithm.StateSerializer

Nested classes/interfaces inherited from class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

JIPipeGraphNode.BaseDirectoryChangedEvent, JIPipeGraphNode.Serializer

Nested classes/interfaces inherited from interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

JIPipeParameterCollection.ParameterChangedEvent, JIPipeParameterCollection.ParameterStructureChangedEvent, JIPipeParameterCollection.ParameterUIChangedEvent

Field Summary

Fields inherited from class org.hkijena.jipipe.api.nodes.JIPipeParameterSlotAlgorithm

SLOT_PARAMETERS

Constructor Summary

Constructors

Constructor and Description
SetPhysicalDimensionsByExpressionsAlgorithm(JIPipeNodeInfo info)
SetPhysicalDimensionsByExpressionsAlgorithm(SetPhysicalDimensionsByExpressionsAlgorithm other)

Method Summary

Modifier and Type	Method and Description
OptionalDefaultExpressionParameter	getPhysicalDimensionT()
OptionalDefaultExpressionParameter	getPhysicalDimensionValue()
OptionalDefaultExpressionParameter	getPhysicalDimensionX()
OptionalDefaultExpressionParameter	getPhysicalDimensionY()
OptionalDefaultExpressionParameter	getPhysicalDimensionZ()
protected void	runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo) Runs code on one data row
void	setPhysicalDimensionT(OptionalDefaultExpressionParameter physicalDimensionT)
void	setPhysicalDimensionValue(OptionalDefaultExpressionParameter physicalDimensionValue)
void	setPhysicalDimensionX(OptionalDefaultExpressionParameter physicalDimensionX)
void	setPhysicalDimensionY(OptionalDefaultExpressionParameter physicalDimensionY)
void	setPhysicalDimensionZ(OptionalDefaultExpressionParameter physicalDimensionZ)

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeSimpleIteratingAlgorithm

generateDataBatchesDryRun, getAdaptiveParameterSettings, getDataBatchGenerationSettings, getGenerationSettingsInterface, getParallelizationBatchSize, isParallelizationEnabled, isParameterUIVisible, isParameterUIVisible, reportValidity, runParameterSet, runPassThrough, setParallelizationEnabled, supportsParallelization

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeParameterSlotAlgorithm

getDataInputSlotCount, getDataInputSlots, getFirstInputSlot, getNonParameterInputSlots, getParameterSlot, getParameterSlotAlgorithmSettings, run

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

canAutoPassThrough, canPassThrough, getStateId, getThreadPool, isEnabled, isPassThrough, isPostprocessor, isPreprocessor, loadExample, runPassThrough, setEnabled, setPassThrough, setThreadPool

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

canUserDelete, clearLocations, clearSlotData, copySlotConfiguration, duplicate, fromJson, fromJsonNode, getAliasIdInParentGraph, getBaseDirectory, getCategory, getCompartmentDisplayName, getCompartmentUUIDInGraphAsString, getCompartmentUUIDInParentGraph, getCustomDescription, getDependencies, getDisplayName, getEventBus, getFirstOutputSlot, getInfo, getInputSlot, getInputSlotMap, getInputSlotOrder, getInputSlots, getInputSlotsWithRole, getInternalStoragePath, getLastInputSlot, getLastOutputSlot, getLocations, getLocationWithin, getName, getNewScratch, getOpenInputSlots, getOutputSlot, getOutputSlotMap, getOutputSlots, getOutputSlotsWithRole, getParentGraph, getProjectCompartment, getProjectDirectory, getScratchBaseDirectory, getSlotConfiguration, getStoragePath, getUUIDInParentGraph, hasInputSlot, hasOutputSlot, isBookmarked, isVisibleIn, onDeserialized, onParameterChanged, onParameterStructureChanged, onParameterUIChanged, onSlotConfigurationChanged, onSlotConnected, onSlotDisconnected, registerSubParameter, renderInputSlots, renderOutputSlots, setAllSlotsVirtual, setBaseDirectory, setBookmarked, setCustomDescription, setCustomName, setInfo, setInternalStoragePath, setLocations, setLocationWithin, setLocationWithin, setParentGraph, setProjectDirectory, setScratchBaseDirectory, setSlotConfiguration, setStoragePath, toggleSlot, toJson, triggerSlotsChangedEvent, updateGraphNodeSlots, updateSlotInheritance

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.hkijena.jipipe.api.JIPipeValidatable

generateValidityReport

Methods inherited from interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

addParameterChangeListener, addParameterChangeListener, getContextActions, getParameter, getParameterAccess, setParameter, triggerParameterChange, triggerParameterStructureChange, triggerParameterUIChange

Constructor Detail

SetPhysicalDimensionsByExpressionsAlgorithm

public SetPhysicalDimensionsByExpressionsAlgorithm(JIPipeNodeInfo info)

SetPhysicalDimensionsByExpressionsAlgorithm

public SetPhysicalDimensionsByExpressionsAlgorithm(SetPhysicalDimensionsByExpressionsAlgorithm other)

Method Detail

runIteration

protected void runIteration(JIPipeDataBatch dataBatch,
                            JIPipeProgressInfo progressInfo)

Description copied from class: JIPipeSimpleIteratingAlgorithm

Runs code on one data row

Specified by:

runIteration in class JIPipeSimpleIteratingAlgorithm

Parameters:

dataBatch - The data interface

progressInfo - the progress info from the run

getPhysicalDimensionX

public OptionalDefaultExpressionParameter getPhysicalDimensionX()

setPhysicalDimensionX

public void setPhysicalDimensionX(OptionalDefaultExpressionParameter physicalDimensionX)

getPhysicalDimensionY

public OptionalDefaultExpressionParameter getPhysicalDimensionY()

setPhysicalDimensionY

public void setPhysicalDimensionY(OptionalDefaultExpressionParameter physicalDimensionY)

getPhysicalDimensionZ

public OptionalDefaultExpressionParameter getPhysicalDimensionZ()

setPhysicalDimensionZ

public void setPhysicalDimensionZ(OptionalDefaultExpressionParameter physicalDimensionZ)

getPhysicalDimensionT

public OptionalDefaultExpressionParameter getPhysicalDimensionT()

setPhysicalDimensionT

public void setPhysicalDimensionT(OptionalDefaultExpressionParameter physicalDimensionT)

getPhysicalDimensionValue

public OptionalDefaultExpressionParameter getPhysicalDimensionValue()

setPhysicalDimensionValue

public void setPhysicalDimensionValue(OptionalDefaultExpressionParameter physicalDimensionValue)