public class OverlapMeasureLabelsAlgorithm extends JIPipeIteratingAlgorithm
JIPipeAlgorithm.StateSerializer
JIPipeGraphNode.BaseDirectoryChangedEvent, JIPipeGraphNode.Serializer
JIPipeParameterCollection.ParameterChangedEvent, JIPipeParameterCollection.ParameterStructureChangedEvent, JIPipeParameterCollection.ParameterUIChangedEvent
SLOT_PARAMETERS
Constructor and Description |
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OverlapMeasureLabelsAlgorithm(JIPipeNodeInfo info) |
OverlapMeasureLabelsAlgorithm(OverlapMeasureLabelsAlgorithm other) |
Modifier and Type | Method and Description |
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OverlapStatisticsSetParameter |
getMeasurements() |
protected void |
runIteration(JIPipeDataBatch dataBatch,
JIPipeProgressInfo progressInfo)
Runs code on one data row
|
void |
setMeasurements(OverlapStatisticsSetParameter measurements) |
generateDataBatchesDryRun, getAdaptiveParameterSettings, getDataBatchGenerationSettings, getGenerationSettingsInterface, getParallelizationBatchSize, isParallelizationEnabled, isParameterUIVisible, isParameterUIVisible, runParameterSet, runPassThrough, setParallelizationEnabled, supportsParallelization
getDataInputSlotCount, getDataInputSlots, getFirstInputSlot, getNonParameterInputSlots, getParameterSlot, getParameterSlotAlgorithmSettings, run
canAutoPassThrough, canPassThrough, getStateId, getThreadPool, isEnabled, isPassThrough, isPostprocessor, isPreprocessor, loadExample, reportValidity, runPassThrough, setEnabled, setPassThrough, setThreadPool
canUserDelete, clearLocations, clearSlotData, copySlotConfiguration, duplicate, fromJson, fromJsonNode, getAliasIdInParentGraph, getBaseDirectory, getCategory, getCompartmentDisplayName, getCompartmentUUIDInGraphAsString, getCompartmentUUIDInParentGraph, getCustomDescription, getDependencies, getDisplayName, getEventBus, getFirstOutputSlot, getInfo, getInputSlot, getInputSlotMap, getInputSlotOrder, getInputSlots, getInputSlotsWithRole, getInternalStoragePath, getLastInputSlot, getLastOutputSlot, getLocations, getLocationWithin, getName, getNewScratch, getOpenInputSlots, getOutputSlot, getOutputSlotMap, getOutputSlots, getOutputSlotsWithRole, getParentGraph, getProjectCompartment, getProjectDirectory, getScratchBaseDirectory, getSlotConfiguration, getStoragePath, getUUIDInParentGraph, hasInputSlot, hasOutputSlot, isBookmarked, isVisibleIn, onDeserialized, onParameterChanged, onParameterStructureChanged, onParameterUIChanged, onSlotConfigurationChanged, onSlotConnected, onSlotDisconnected, registerSubParameter, renderInputSlots, renderOutputSlots, setAllSlotsVirtual, setBaseDirectory, setBookmarked, setCustomDescription, setCustomName, setInfo, setInternalStoragePath, setLocations, setLocationWithin, setLocationWithin, setParentGraph, setProjectDirectory, setScratchBaseDirectory, setSlotConfiguration, setStoragePath, toggleSlot, toJson, triggerSlotsChangedEvent, updateGraphNodeSlots, updateSlotInheritance
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
generateValidityReport
addParameterChangeListener, addParameterChangeListener, getContextActions, getParameter, getParameterAccess, setParameter, triggerParameterChange, triggerParameterStructureChange, triggerParameterUIChange
public OverlapMeasureLabelsAlgorithm(JIPipeNodeInfo info)
public OverlapMeasureLabelsAlgorithm(OverlapMeasureLabelsAlgorithm other)
public OverlapStatisticsSetParameter getMeasurements()
public void setMeasurements(OverlapStatisticsSetParameter measurements)
protected void runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
JIPipeIteratingAlgorithm
runIteration
in class JIPipeIteratingAlgorithm
dataBatch
- The data interfaceprogressInfo
- the progress info from the runCopyright © 2020–2022 Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute (HKI). All rights reserved.