org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.modify

Class ChangeRoiPropertiesAlgorithm

java.lang.Object

org.hkijena.jipipe.api.nodes.JIPipeGraphNode

org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

org.hkijena.jipipe.api.nodes.JIPipeParameterSlotAlgorithm

org.hkijena.jipipe.api.nodes.JIPipeSimpleIteratingAlgorithm

org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.modify.ChangeRoiPropertiesAlgorithm

All Implemented Interfaces:

JIPipeValidatable, JIPipeAdaptiveParametersAlgorithm, JIPipeDataBatchAlgorithm, JIPipeParallelizedAlgorithm, JIPipeParameterCollection

public class ChangeRoiPropertiesAlgorithm
extends JIPipeSimpleIteratingAlgorithm

Wrapper around RoiManager

Nested Class Summary

Nested classes/interfaces inherited from class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

JIPipeAlgorithm.StateSerializer

Nested classes/interfaces inherited from class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

JIPipeGraphNode.BaseDirectoryChangedEvent, JIPipeGraphNode.Serializer

Nested classes/interfaces inherited from interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

JIPipeParameterCollection.ParameterChangedEvent, JIPipeParameterCollection.ParameterStructureChangedEvent, JIPipeParameterCollection.ParameterUIChangedEvent

Field Summary

Fields inherited from class org.hkijena.jipipe.api.nodes.JIPipeParameterSlotAlgorithm

SLOT_PARAMETERS

Constructor Summary

Constructors

Constructor and Description
ChangeRoiPropertiesAlgorithm(ChangeRoiPropertiesAlgorithm other) Instantiates a new node type.
ChangeRoiPropertiesAlgorithm(JIPipeNodeInfo info) Instantiates a new node type.

Method Summary

Modifier and Type	Method and Description
boolean	getCenterScale()
OptionalColorParameter	getFillColor()
OptionalColorParameter	getLineColor()
OptionalDoubleParameter	getLineWidth()
OptionalIntegerParameter	getPositionC()
OptionalIntegerParameter	getPositionT()
OptionalDoubleParameter	getPositionX()
OptionalDoubleParameter	getPositionY()
OptionalIntegerParameter	getPositionZ()
OptionalStringParameter	getRoiName()
OptionalDoubleParameter	getScaleX()
OptionalDoubleParameter	getScaleY()
protected void	runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo) Runs code on one data row
void	setCenterScale(boolean centerScale)
void	setFillColor(OptionalColorParameter fillColor)
void	setLineColor(OptionalColorParameter lineColor)
void	setLineWidth(OptionalDoubleParameter lineWidth)
void	setPositionC(OptionalIntegerParameter positionC)
void	setPositionT(OptionalIntegerParameter positionT)
void	setPositionX(OptionalDoubleParameter positionX)
void	setPositionY(OptionalDoubleParameter positionY)
void	setPositionZ(OptionalIntegerParameter positionZ)
void	setRoiName(OptionalStringParameter roiName)
void	setScaleX(OptionalDoubleParameter scaleX)
void	setScaleY(OptionalDoubleParameter scaleY)

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeSimpleIteratingAlgorithm

generateDataBatchesDryRun, getAdaptiveParameterSettings, getDataBatchGenerationSettings, getGenerationSettingsInterface, getParallelizationBatchSize, isParallelizationEnabled, isParameterUIVisible, isParameterUIVisible, reportValidity, runParameterSet, runPassThrough, setParallelizationEnabled, supportsParallelization

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeParameterSlotAlgorithm

getDataInputSlotCount, getDataInputSlots, getFirstInputSlot, getNonParameterInputSlots, getParameterSlot, getParameterSlotAlgorithmSettings, run

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

canAutoPassThrough, canPassThrough, getStateId, getThreadPool, isEnabled, isPassThrough, isPostprocessor, isPreprocessor, loadExample, runPassThrough, setEnabled, setPassThrough, setThreadPool

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

canUserDelete, clearLocations, clearSlotData, copySlotConfiguration, duplicate, fromJson, fromJsonNode, getAliasIdInParentGraph, getBaseDirectory, getCategory, getCompartmentDisplayName, getCompartmentUUIDInGraphAsString, getCompartmentUUIDInParentGraph, getCustomDescription, getDependencies, getDisplayName, getEventBus, getFirstOutputSlot, getInfo, getInputSlot, getInputSlotMap, getInputSlotOrder, getInputSlots, getInputSlotsWithRole, getInternalStoragePath, getLastInputSlot, getLastOutputSlot, getLocations, getLocationWithin, getName, getNewScratch, getOpenInputSlots, getOutputSlot, getOutputSlotMap, getOutputSlots, getOutputSlotsWithRole, getParentGraph, getProjectCompartment, getProjectDirectory, getScratchBaseDirectory, getSlotConfiguration, getStoragePath, getUUIDInParentGraph, hasInputSlot, hasOutputSlot, isBookmarked, isVisibleIn, onDeserialized, onParameterChanged, onParameterStructureChanged, onParameterUIChanged, onSlotConfigurationChanged, onSlotConnected, onSlotDisconnected, registerSubParameter, renderInputSlots, renderOutputSlots, setAllSlotsVirtual, setBaseDirectory, setBookmarked, setCustomDescription, setCustomName, setInfo, setInternalStoragePath, setLocations, setLocationWithin, setLocationWithin, setParentGraph, setProjectDirectory, setScratchBaseDirectory, setSlotConfiguration, setStoragePath, toggleSlot, toJson, triggerSlotsChangedEvent, updateGraphNodeSlots, updateSlotInheritance

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.hkijena.jipipe.api.JIPipeValidatable

generateValidityReport

Methods inherited from interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

addParameterChangeListener, addParameterChangeListener, getContextActions, getParameter, getParameterAccess, setParameter, triggerParameterChange, triggerParameterStructureChange, triggerParameterUIChange

Constructor Detail

ChangeRoiPropertiesAlgorithm

public ChangeRoiPropertiesAlgorithm(JIPipeNodeInfo info)

Instantiates a new node type.

Parameters:

info - the info

ChangeRoiPropertiesAlgorithm

public ChangeRoiPropertiesAlgorithm(ChangeRoiPropertiesAlgorithm other)

Instantiates a new node type.

Parameters:

other - the other

Method Detail

runIteration

protected void runIteration(JIPipeDataBatch dataBatch,
                            JIPipeProgressInfo progressInfo)

Description copied from class: JIPipeSimpleIteratingAlgorithm

Runs code on one data row

Specified by:

runIteration in class JIPipeSimpleIteratingAlgorithm

Parameters:

dataBatch - The data interface

progressInfo - the progress info from the run

getPositionX

public OptionalDoubleParameter getPositionX()

setPositionX

public void setPositionX(OptionalDoubleParameter positionX)

getPositionY

public OptionalDoubleParameter getPositionY()

setPositionY

public void setPositionY(OptionalDoubleParameter positionY)

getPositionZ

public OptionalIntegerParameter getPositionZ()

setPositionZ

public void setPositionZ(OptionalIntegerParameter positionZ)

getPositionC

public OptionalIntegerParameter getPositionC()

setPositionC

public void setPositionC(OptionalIntegerParameter positionC)

getPositionT

public OptionalIntegerParameter getPositionT()

setPositionT

public void setPositionT(OptionalIntegerParameter positionT)

getFillColor

public OptionalColorParameter getFillColor()

setFillColor

public void setFillColor(OptionalColorParameter fillColor)

getLineColor

public OptionalColorParameter getLineColor()

setLineColor

public void setLineColor(OptionalColorParameter lineColor)

getLineWidth

public OptionalDoubleParameter getLineWidth()

setLineWidth

public void setLineWidth(OptionalDoubleParameter lineWidth)

getRoiName

public OptionalStringParameter getRoiName()

setRoiName

public void setRoiName(OptionalStringParameter roiName)

getScaleX

public OptionalDoubleParameter getScaleX()

setScaleX

public void setScaleX(OptionalDoubleParameter scaleX)

getScaleY

public OptionalDoubleParameter getScaleY()

setScaleY

public void setScaleY(OptionalDoubleParameter scaleY)

getCenterScale

public boolean getCenterScale()

setCenterScale

public void setCenterScale(boolean centerScale)