JIPipe is a visual programming language for ImageJ that allows you to create macros without any programming by just creating a flowchart. In this documentation, you will find information about the basic concepts behind JIPipe, how to create an image analysis pipeline with the JIPipe graphical user interface (GUI), and run your pipeline and review results. You will also find guides how to connect JIPipe with ImageJ and other software.

If you are not familiar with the idea behind JIPipe, we recommend to watch following video:

Here you can find the topics of this documentation: