Uses of Class
org.hkijena.jipipe.api.nodes.JIPipeDataBatch

Packages that use JIPipeDataBatch

Package	Description
org.hkijena.jipipe.api.nodes
org.hkijena.jipipe.extensions.annotation.algorithms
org.hkijena.jipipe.extensions.annotation.datasources
org.hkijena.jipipe.extensions.cellpose.algorithms
org.hkijena.jipipe.extensions.clij2
org.hkijena.jipipe.extensions.clij2.algorithms
org.hkijena.jipipe.extensions.filesystem.algorithms
org.hkijena.jipipe.extensions.filesystem.datasources
org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters
org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors
org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots
org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks
org.hkijena.jipipe.extensions.ijweka.nodes
org.hkijena.jipipe.extensions.imagej2
org.hkijena.jipipe.extensions.imagej2.algorithms
org.hkijena.jipipe.extensions.imagej2.io
org.hkijena.jipipe.extensions.imagej2.io.data.input
org.hkijena.jipipe.extensions.imagej2.io.data.output
org.hkijena.jipipe.extensions.imagej2.io.parameters.input
org.hkijena.jipipe.extensions.imagej2.io.parameters.output
org.hkijena.jipipe.extensions.imagejalgorithms.ij1
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.analyze
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.background
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.blur
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.calibration
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.colocalization
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.color
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.contrast
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.convert
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.convolve
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.datasources
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.dimensions
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.edge
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.features
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.fft
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.generate
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.io
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.labels
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.labels.filter
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.lut
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.distancemap
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.local
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.misc
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.morphology
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.noise
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.opticalflow
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.overlay
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.annotations
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.assemble
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.convert
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.draw
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.filter
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.generate
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.measure
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.merge
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.modify
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.properties
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.sort
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.split
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.segment
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.sharpen
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.statistics
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.color
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.iterative
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.local
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.transform
org.hkijena.jipipe.extensions.imagejalgorithms.utils
org.hkijena.jipipe.extensions.imagejdatatypes.algorithms
org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color
org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources
org.hkijena.jipipe.extensions.multiparameters.nodes
org.hkijena.jipipe.extensions.omero.algorithms
org.hkijena.jipipe.extensions.omero.datasources
org.hkijena.jipipe.extensions.python
org.hkijena.jipipe.extensions.python.algorithms
org.hkijena.jipipe.extensions.r.algorithms
org.hkijena.jipipe.extensions.strings.datasources
org.hkijena.jipipe.extensions.tables.nodes
org.hkijena.jipipe.extensions.tables.nodes.annotations
org.hkijena.jipipe.extensions.tables.nodes.columns
org.hkijena.jipipe.extensions.tables.nodes.filter
org.hkijena.jipipe.extensions.tables.nodes.merge
org.hkijena.jipipe.extensions.tables.nodes.rows
org.hkijena.jipipe.extensions.tables.nodes.split
org.hkijena.jipipe.extensions.tables.nodes.transform
org.hkijena.jipipe.extensions.utils.algorithms
org.hkijena.jipipe.extensions.utils.algorithms.datatable
org.hkijena.jipipe.extensions.utils.algorithms.meta
org.hkijena.jipipe.extensions.utils.algorithms.processes

Uses of JIPipeDataBatch in org.hkijena.jipipe.api.nodes

Methods in org.hkijena.jipipe.api.nodes that return types with arguments of type JIPipeDataBatch

Modifier and Type	Method and Description
static List<JIPipeDataBatch>	JIPipeMergingDataBatchBuilder.convertMergingToSingleDataBatches(List<JIPipeMergingDataBatch> mergingDataBatches) Builds a single data batch where each slot only can have one row

Methods in org.hkijena.jipipe.api.nodes with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
int	JIPipeDataBatch.compareTo(JIPipeDataBatch o)
protected abstract void	JIPipeParameterlessSimpleIteratingAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo) Runs code on one data row
protected abstract void	JIPipeIteratingAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo) Runs code on one data row
protected abstract void	JIPipeSimpleIteratingAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo) Runs code on one data row
protected void	JIPipeIteratingAlgorithm.runPassThrough(JIPipeProgressInfo progressInfo, JIPipeDataBatch dataBatch) A pass-through variant for iterating algorithms.
protected void	JIPipeSimpleIteratingAlgorithm.runPassThrough(JIPipeProgressInfo progressInfo, JIPipeDataBatch dataBatch) A pass-through variant for iterating algorithms.

Constructors in org.hkijena.jipipe.api.nodes with parameters of type JIPipeDataBatch

Constructor and Description
JIPipeDataBatch(JIPipeDataBatch other) Creates a copy

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.annotation.algorithms

Methods in org.hkijena.jipipe.extensions.annotation.algorithms with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	SplitByAnnotationScript.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MergeAnnotations.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ModifyAnnotationScript.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RenameDataAnnotation.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	GenerateUniqueAnnotation.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	AnnotateWithData.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	AnnotateWithSourceSlot.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SetSingleAnnotation.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	DataAnnotationToStringAnnotation.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ExtractDataAnnotation.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SimplifyAnnotationsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	AnnotateByExpression.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RenameAnnotation.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RemoveAnnotationAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	AnnotateWithDataString.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	OverwriteAnnotations.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ExtractAndReplaceAnnotation.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RemoveDataAnnotations.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.annotation.datasources

Methods in org.hkijena.jipipe.extensions.annotation.datasources with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	AnnotationTableFromFile.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.cellpose.algorithms

Methods in org.hkijena.jipipe.extensions.cellpose.algorithms with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	ImportCellposeModelAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImportCellposeSizeModelAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.clij2

Methods in org.hkijena.jipipe.extensions.clij2 with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	CLIJCommandNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.clij2.algorithms

Methods in org.hkijena.jipipe.extensions.clij2.algorithms with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	Clij2ExecuteKernelIterating.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	Clij2ExecuteKernelSimpleIterating.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	Clij2PushAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	Clij2PullAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.filesystem.algorithms

Methods in org.hkijena.jipipe.extensions.filesystem.algorithms with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	SimpleFolderAnnotationGenerator.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	AnnotationToPath.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImportDataRowFolder.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	CreateDirectory.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	AnnotateWithPathProperties.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FilterPaths.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	CopyPath.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ConcatenatePaths.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SimplePathAnnotationGenerator.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ExportData.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SimpleFileAnnotationGenerator.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RelativizeByParameter.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImportDataTableDirectory.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ListFiles.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ExtractParent.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ConcatenateByParameter.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RenameByString.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ExtractFileName.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ListSubfolders.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RelativizePaths.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ConvertDataToOutputPath.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ModifyPath.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImportDataTableArchive.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	AnnotationTableToPaths.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.filesystem.datasources

Methods in org.hkijena.jipipe.extensions.filesystem.datasources with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	PathFromUserDataSource.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	DownloadFilesDataSource.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters

Methods in org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	ConvertSpotsToRoiNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ConvertTracksToRoiNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors

Methods in org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	CreateSpotDetectorNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	CreateSpotTrackerNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots

Methods in org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	MeasureSpotsNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SpotFilterNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SpotsToRGBNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SplitSpotsNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SpotDetectorNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks

Methods in org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	TracksToRGBNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MeasureBranchesNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	TrackFilterNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MeasureEdgesNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	TrackSchemeRendererNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MeasureTracksNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FollowSpotsPerTrackNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SplitTracksNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	TrackingNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.ijweka.nodes

Methods in org.hkijena.jipipe.extensions.ijweka.nodes with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	WekaClassification2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	WekaTrainingROI3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	WekaTrainingROI2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	WekaTrainingLabels2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	WekaClassification3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImportWekaModelFromFileAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	WekaTrainingMask2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagej2

Methods in org.hkijena.jipipe.extensions.imagej2 with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	ImageJ2OpNode.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagej2.algorithms

Methods in org.hkijena.jipipe.extensions.imagej2.algorithms with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	CreateIJ2ShapeAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	CreateIJ2OutOfBoundsFactoryAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagej2.io

Methods in org.hkijena.jipipe.extensions.imagej2.io with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
boolean	ImageJ2ModuleIO.transferFromJIPipe(ImageJ2OpNode node, JIPipeDataBatch dataBatch, ModuleItem moduleItem, Module module, JIPipeProgressInfo progressInfo) Transfers data from JIPipe into the module
boolean	ServiceImageJ2ModuleIO.transferFromJIPipe(ImageJ2OpNode node, JIPipeDataBatch dataBatch, ModuleItem moduleItem, Module module, JIPipeProgressInfo progressInfo)
boolean	ImageJ2ModuleIO.transferToJIPipe(ImageJ2OpNode node, JIPipeDataBatch dataBatch, ParametersData moduleOutputParameters, ModuleItem moduleItem, Module module, JIPipeProgressInfo progressInfo) Transfers data from JIPipe from the module
boolean	ServiceImageJ2ModuleIO.transferToJIPipe(ImageJ2OpNode node, JIPipeDataBatch dataBatch, ParametersData moduleOutputParameters, ModuleItem moduleItem, Module module, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagej2.io.data.input

Methods in org.hkijena.jipipe.extensions.imagej2.io.data.input with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
boolean	DataSlotModuleInput.transferFromJIPipe(ImageJ2OpNode node, JIPipeDataBatch dataBatch, ModuleItem moduleItem, Module module, JIPipeProgressInfo progressInfo)
boolean	DataSlotModuleInput.transferToJIPipe(ImageJ2OpNode node, JIPipeDataBatch dataBatch, ParametersData moduleOutputParameters, ModuleItem moduleItem, Module module, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagej2.io.data.output

Methods in org.hkijena.jipipe.extensions.imagej2.io.data.output with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
boolean	DataSlotModuleOutput.transferFromJIPipe(ImageJ2OpNode node, JIPipeDataBatch dataBatch, ModuleItem moduleItem, Module module, JIPipeProgressInfo progressInfo)
boolean	DataSlotModuleOutput.transferToJIPipe(ImageJ2OpNode node, JIPipeDataBatch dataBatch, ParametersData moduleOutputParameters, ModuleItem moduleItem, Module module, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagej2.io.parameters.input

Methods in org.hkijena.jipipe.extensions.imagej2.io.parameters.input with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
boolean	ParameterImageJ2ModuleInput.transferFromJIPipe(ImageJ2OpNode node, JIPipeDataBatch dataBatch, ModuleItem moduleItem, Module module, JIPipeProgressInfo progressInfo)
boolean	ParameterImageJ2ModuleInput.transferToJIPipe(ImageJ2OpNode node, JIPipeDataBatch dataBatch, ParametersData moduleOutputParameters, ModuleItem moduleItem, Module module, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagej2.io.parameters.output

Methods in org.hkijena.jipipe.extensions.imagej2.io.parameters.output with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
boolean	ParameterImageJ2ModuleOutput.transferFromJIPipe(ImageJ2OpNode node, JIPipeDataBatch dataBatch, ModuleItem moduleItem, Module module, JIPipeProgressInfo progressInfo)
boolean	ParameterImageJ2ModuleOutput.transferToJIPipe(ImageJ2OpNode node, JIPipeDataBatch dataBatch, ParametersData moduleOutputParameters, ModuleItem moduleItem, Module module, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1 with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	MacroWrapperAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.analyze

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.analyze with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	AnnotateByImageStatisticsExpressionAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImageStatisticsExpressionAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImageStatisticsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	AnalyzeSkeleton2D3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FindParticles2D.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.background

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.background with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	RollingBallBackgroundEstimator2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	ConnectedComponentsLabeling2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ConvexifyAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	DistanceTransformWatershed2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	UltimateErodedPoints2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	VolumeOpening3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	BitwiseLogicalOperationAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	KeepLargestRegionAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	VolumeOpening2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ConnectedComponentsLabeling3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RemoveLargestRegionAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	BinarizeAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	Voronoi2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ConditionalInverterAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.blur

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.blur with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	BoxFilter2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MedianBlurFilter2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MedianBlurRGB2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MedianBlurGreyscale8U2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	BoxFilter3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	GaussianBlur2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	GaussianBlur3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MedianBlurFilter3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.calibration

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.calibration with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	SetPhysicalDimensionsByExpressionsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SetPhysicalDimensionsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	DrawScaleBarAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SetPhysicalDimensionsByAnnotationsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.colocalization

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.colocalization with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	Coloc2Node.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.color

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.color with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	ColorToGreyscaleExpression2D.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SetToValueAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RenderImageToRGBAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SplitChannelsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo) Deprecated.
protected void	ArrangeChannelsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	InvertColorsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	OverlayImagesAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo) Deprecated.
protected void	MergeChannelsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SplitRGBChannelsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	BlendImagesAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	CombineChannelsToRGBAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	NewSplitChannelsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SetToColorAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.contrast

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.contrast with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	CLAHEContrastEnhancer.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	IlluminationCorrection2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	HistogramContrastEnhancerAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.convert

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.convert with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	ConvertImageToLABAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ConvertImageToHSBAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MatrixToImageAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ConvertImageTo16BitAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImageToTableAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImageToMatrixAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ConvertImageAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ConvertImageTo32BitAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	TableToImageAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ConvertImageTo8BitAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.convolve

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.convolve with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	ConvolveByParameter2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ConvolveByImage2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.datasources

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.datasources with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	OMEImageFromImagePlus.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImageStackFromFolder.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.dimensions

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.dimensions with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	StackTo2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	HyperstackSlicerAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	StackSplitterAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	StackCombinerAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SplitByDimensionAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ZProjectorAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MontageToStackAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	StackInverterAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	NewZProjectorAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ExpressionSlicerAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	StackToMontageAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ResliceAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ReorderDimensionsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.edge

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.edge with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	CannyEdgeDetectorAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	LaplacianEdgeDetectorAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SobelEdgeDetectorAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.features

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.features with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	DifferenceOfGaussian2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FrangiVesselnessFeatures.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	LaplacianOfGaussian2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MeijeringVesselness2DFeatures.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	LocalMaxima2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	DirectionalFilter2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.fft

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.fft with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	FFT2DForwardTransform.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FFT2DSwapQuadrants.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FFT2DInverseTransform.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.generate

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.generate with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	ImageFromMatrix2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	GenerateZeroImage.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	GenerateStructureElement3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	GenerateStructureElement2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	GenerateLUTImageFromColorMap.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.io

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.io with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	ROIFromGUI.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ResultsTableToGUI.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ExportImageAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RunImageJImporterAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ExportROIAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ROIToGUI.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ExportImage2Algorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ResultsTableFromGUI.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImagePlusToGUI.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImagePlusFromGUI.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ExportTableAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.labels

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.labels with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	OverlapMeasureLabelsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	DilateLabelsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	GetLabelBoundariesAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ReplaceLabelsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	AnnotateWithOverlapMeasureLabelsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MergeLabelsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	LabelsToROIAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	KeepLargestLabelAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ExtractLabelStatisticsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RemapLabelsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	LabelsToRGBAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MergeSmallLabelsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	CropLabelsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ExpandLabelsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.labels.filter

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.labels.filter with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	FilterLabelsByMaskAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RemoveBorderLabelsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FilterLabelsByIdAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FilterLabelsByExpression2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FilterLabelsByStatisticsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FilterLabelsByExpression3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RemoveLargestLabelAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FilterLabelsByOverlapAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.lut

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.lut with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	SetLUTFromColorMapAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ApplyLUTAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RemoveLUTAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SetLUTFromColorsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	LUTInverterAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SetLUTFromImageAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	Hessian2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	GenerateFromMathExpression2D.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RemoveNaNFilter2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ApplyTransform2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ApplyVectorMathExpression2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImageCalculator2DExpression.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ApplyMath2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImageCalculator2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ApplyColorMathExpression2DExpression.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	DivideByMaximumAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RoundFloatImageAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	GenerateVectorFromMathExpression.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ApplyMathExpression2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.distancemap

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.distancemap with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	ApplyDistanceTransform2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	LabelChamferDistanceMap3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ChamferDistanceMap2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ChamferDistanceMap3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	GeodesicDistanceMap2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.local

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.local with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	ExtendedMinima2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ExtendedMinima3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RegionalMinima2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	LocalMinimumFilter2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	LocalImageCalculator2DExpression.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImposeMaxima3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	LocalMinimumFilter3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	LocalVarianceFilter3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	LocalVarianceFilter2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ExtendedMaxima3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RegionalMaxima3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImposeMaxima2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RegionalMinima3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	LocalMaximumFilter2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	LocalMaximumFilter3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RegionalMaxima2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ExtendedMaxima2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.misc

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.misc with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	DataToPreviewAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RenderJIPipeProjectAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.morphology

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.morphology with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	Morphology3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MorphologyBinary2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MorphologicalReconstruction3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MorphologicalReconstruction2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MorphologySkeletonize2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MorphologySkeletonize3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MorphologyOutline2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	GrayscaleAttributeFiltering2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FindHoles2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MorphologyInternalGradient2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	Morphology2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MorphologyFillHoles2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	GrayscaleAttributeFiltering3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.noise

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.noise with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	AddSaltAndPepperNoise2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RemoveOutliersFilter2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	DespeckleFilter2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	AddNoise2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.opticalflow

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.opticalflow with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	MSEGaussianFlowAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	PMCCBlockFlowAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MSEBlockFlowAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.overlay

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.overlay with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	ExtractOverlayAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RemoveOverlayAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RenderOverlayAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SetOverlayAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	CropToRoiAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SplitRoiConnectedComponentsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SetRoiImageAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	UnsetRoiImageAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RoiCalculatorAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	GetRoiImageAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ExtractImageInRoiAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.annotations

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.annotations with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	RoiPropertiesToAnnotationsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.assemble

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.assemble with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	ExtractFromROIAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.convert

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.convert with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	RoiToRGBAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	UnreferencedRoiToRGBAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RoiToMaskAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ROIToLabelsExpressionAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ROIToLabelsByNameAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	UnreferencedRoiToMaskAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.draw

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.draw with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	DrawRectangleRoiAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	DrawOvalRoiAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	DrawScaleBarRoiAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	DrawTextRoiAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.filter

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.filter with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	FilterRoiByStatisticsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RemoveBorderRoisAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FilterRoiByNameAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SliceROIListAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FilterRoiByStatisticsScriptAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FilterROIListsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FilterROIByOverlapAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.generate

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.generate with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	MaskToRoiAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	AppendRectangularRoiAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo) Deprecated.
protected void	ReferencedAppendRectangularRoiAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo) Deprecated.
protected void	ReferencedDefineRectangularRoiAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo) Deprecated.
protected void	TableToRectangularROIAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	TableToCircularROIAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.measure

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.measure with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	RoiStatisticsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.merge

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.merge with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	FilterAndMergeRoiByStatisticsScriptAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.modify

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.modify with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	ColorRoiByStatisticsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	OutlineRoiAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ChangeRoiPropertiesFromAnnotationsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ChangeRoiPropertiesAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RoiToCentroidAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RoiFloodFillAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ReorderRoiDimensionsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ColorRoiByNameAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ScaleRoiAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ChangeRoiPropertiesFromExpressionsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.properties

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.properties with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	SetRoiMetadataByStatisticsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SetROIMetadataFromTableAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RemoveROIMetadataAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ExtractROIMetadataAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.sort

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.sort with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	SortAndExtractRoiByStatisticsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo) Deprecated.
protected void	SortRoiListByExpressionsAndMeasurementsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SortAndExtractRoiByStatisticsAlgorithm2.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.split

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.split with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	SplitRoiAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ExplodeRoiAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.segment

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.segment with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	SeededWatershedSegmentationAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RidgeDetector2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ClassicWatershedSegmentationAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.sharpen

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.sharpen with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	LaplacianSharpen2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.statistics

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.statistics with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	AverageKeyValueThresholdStatisticsGenerator.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	KeyValueThresholdStatisticsGenerator.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	KeyValueThresholdPartitionAveragesGenerator.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	KeyValueAveragesGenerator.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	HistogramGenerator.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FastKeyValueThresholdStatisticsGenerator.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	KeyValueHistogramGenerator.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	KeyValueThresholdPartitionGenerator.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	CustomAutoThreshold2D8UAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ManualThreshold8U2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	CustomAutoThreshold2D16UAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FastCircularHoughSegmentation2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	LinesHoughDetection2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	CircularHoughSegmentation2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	CustomAutoThreshold2D32FAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	AutoThreshold2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	HessianSegmentation2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	PercentileThreshold8U2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ManualThreshold32F2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	InternalGradientSegmentation2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ManualThreshold16U2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	BrightSpotsSegmentation2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ThresholdByAnnotation2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.color

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.color with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	ManualHSBThreshold2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ManualRGBThreshold2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ColorThresholdExpression2D.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ManualLABThreshold2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.iterative

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.iterative with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	IterativeThresholdByROIStatistics2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.local

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.local with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	LocalAutoThreshold2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	NiblackLocalAutoThreshold2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ContrastLocalAutoThreshold2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	BernsenLocalAutoThreshold2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	PhansalkarLocalAutoThreshold2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SauvolaLocalAutoThreshold2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.transform

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.transform with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
ij.process.ImageProcessor	MergeImagesAlgorithm.getMask(JIPipeDataBatch dataBatch, ImageSliceIndex sliceIndex, JIPipeProgressInfo progressInfo)
protected void	TransformRotate2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	TransformFlip2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	TransformCrop2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	TransformRotateFree2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	TransformEqualizeDimensionsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	TransformSetHyperstackDimensionsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	TransformScale2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	TileImage2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	AddBorder2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	Warp2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	TransformScale3DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MergeImagesAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	TransformExpandCanvas2DAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejalgorithms.utils

Methods in org.hkijena.jipipe.extensions.imagejalgorithms.utils with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
ij.process.ImageProcessor	SimpleImageAndRoiIteratingAlgorithm.getMask(JIPipeDataBatch dataBatch, ImageSliceIndex sliceIndex, JIPipeProgressInfo progressInfo)
static ij.ImagePlus	ImageJAlgorithmUtils.getMaskFromMaskOrROI(ImageROITargetArea targetArea, JIPipeDataBatch dataBatch, String imageSlotName, JIPipeProgressInfo progressInfo)
static ij.process.ImageProcessor	ImageJAlgorithmUtils.getMaskProcessorFromMaskOrROI(ImageROITargetArea targetArea, JIPipeDataBatch dataBatch, ImageSliceIndex sliceIndex, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms

Methods in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	SetBioFormatsExporterSettings.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImagePropertiesToAnnotationAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	DisplayRangeCalibrationAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	BioFormatsExporter.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color

Methods in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	ColorSpaceConverterAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources

Methods in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	BioFormatsImporter.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ROIDataFromOMEImage.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ROIDataFromFile.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImportLUTAsRGBFromFile.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ResultsTableFromFile.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImagePlusFromFile.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.multiparameters.nodes

Methods in org.hkijena.jipipe.extensions.multiparameters.nodes with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	AnnotationsToParametersAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ParametersToAnnotationsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MergeParametersAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	GenerateParametersFromExpressionAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ConvertParametersToTableAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.omero.algorithms

Methods in org.hkijena.jipipe.extensions.omero.algorithms with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	DownloadOMEROTableAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	DownloadOMEROImageAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.omero.datasources

Methods in org.hkijena.jipipe.extensions.omero.datasources with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	OMEROImageReferenceDataSource.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	OMEROGroupReferenceDataSource.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	OMEROFindProjectAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	OMERODatasetReferenceDataSource.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	OMEROProjectReferenceDataSource.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.python

Methods in org.hkijena.jipipe.extensions.python with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
static void	PythonUtils.extractOutputs(JIPipeDataBatch dataBatch, Map<String,Path> outputSlotPaths, List<JIPipeOutputDataSlot> outputSlots, JIPipeTextAnnotationMergeMode annotationMergeStrategy, JIPipeProgressInfo progressInfo)
static Map<String,Path>	PythonUtils.installInputSlots(StringBuilder code, JIPipeDataBatch dataBatch, JIPipeGraphNode node, List<JIPipeInputDataSlot> effectiveInputSlots, Path workDirectory, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.python.algorithms

Methods in org.hkijena.jipipe.extensions.python.algorithms with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	SimpleIteratingJythonScriptAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	IteratingJythonScriptAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	IteratingPythonScriptAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.r.algorithms

Methods in org.hkijena.jipipe.extensions.r.algorithms with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	ImportRDatasetAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	IteratingRScriptAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.strings.datasources

Methods in org.hkijena.jipipe.extensions.strings.datasources with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	StringDefinitionDataSource.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.tables.nodes

Methods in org.hkijena.jipipe.extensions.tables.nodes with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	ModifyTableColumnNamesAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	GenerateColumnAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	IntegrateColumnsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ModifyTablesScript.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	GenerateTableFromExpressionAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.tables.nodes.annotations

Methods in org.hkijena.jipipe.extensions.tables.nodes.annotations with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	AddAnnotationColumnsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ConvertAnnotationTableToAnnotatedTables.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	AnnotateByTablePropertiesAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	AnnotateDataWithTableValues.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.tables.nodes.columns

Methods in org.hkijena.jipipe.extensions.tables.nodes.columns with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	RenameSingleColumnsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RenameTableColumnsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RemoveColumnAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ColumnToStringAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ApplyExpressionToColumnsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ColumnToNumericAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ConvertColumnsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RenameTableColumnsToAnnotationAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SortTableColumnsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ColumnsToAnnotationsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.tables.nodes.filter

Methods in org.hkijena.jipipe.extensions.tables.nodes.filter with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	SliceTableRowsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FilterTableRowsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	FilterTablesAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.tables.nodes.merge

Methods in org.hkijena.jipipe.extensions.tables.nodes.merge with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	MergeTableColumnsSupplementAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.tables.nodes.rows

Methods in org.hkijena.jipipe.extensions.tables.nodes.rows with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	SortTableRowsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	AddMissingRowsInSeriesAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ApplyExpressionPerRowAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.tables.nodes.split

Methods in org.hkijena.jipipe.extensions.tables.nodes.split with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	SplitTableIntoColumnsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SplitTableByColumnsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	SplitTableIntoRowsAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.tables.nodes.transform

Methods in org.hkijena.jipipe.extensions.tables.nodes.transform with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	UnMeltTableAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	MeltTableAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	HistogramAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.utils.algorithms

Methods in org.hkijena.jipipe.extensions.utils.algorithms with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	SetVirtualStateAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ConverterAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RunExpressionAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ImportJIPipeSlotFolderAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	ToDataStringAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.utils.algorithms.datatable

Methods in org.hkijena.jipipe.extensions.utils.algorithms.datatable with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	PullDataTableAnnotations.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	PushDataTableAnnotations.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	AnnotateWithDataTableProperties.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.utils.algorithms.meta

Methods in org.hkijena.jipipe.extensions.utils.algorithms.meta with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	GetJIPipeSlotFolderAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	RunJIPipeProjectAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
protected void	PathsToJIPipeProjectParametersAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)

Uses of JIPipeDataBatch in org.hkijena.jipipe.extensions.utils.algorithms.processes

Methods in org.hkijena.jipipe.extensions.utils.algorithms.processes with parameters of type JIPipeDataBatch

Modifier and Type	Method and Description
protected void	RunProcessIteratingAlgorithm.runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)