A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

A

a0 - Variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.connections.JIPipeDesktopRectangularLine

a1 - Variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.connections.JIPipeDesktopRectangularLine

AbsoluteColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a abs(x) function

AbsoluteColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.AbsoluteColumnOperation

absoluteToJIPipeUserDirRelative(Path) - Static method in class org.hkijena.jipipe.utils.PathUtils

AbstractExpressionParameter - Class in org.hkijena.jipipe.plugins.expressions

A parameter that contains an expression.

AbstractExpressionParameter() - Constructor for class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

AbstractExpressionParameter(String) - Constructor for class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

AbstractExpressionParameter(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

AbstractJIPipeDesktopGraphEditorUI - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons

A panel around JIPipeDesktopGraphCanvasUI that comes with scrolling/panning, properties panel, and a menu bar

AbstractJIPipeDesktopGraphEditorUI(JIPipeDesktopWorkbench, JIPipeGraph, UUID, JIPipeHistoryJournal, JIPipeGraphEditorUIApplicationSettings) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

AbstractJIPipeDesktopGraphEditorUI(JIPipeDesktopWorkbench, JIPipeGraph, UUID, JIPipeHistoryJournal) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

AbstractJIPipeDesktopGraphEditorUI.NavigationRenderer - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons

Renders items in the navigator

AbstractJIPipeEvent - Class in org.hkijena.jipipe.api.events

AbstractJIPipeEvent(Object) - Constructor for class org.hkijena.jipipe.api.events.AbstractJIPipeEvent

AbstractJIPipeParameterCollection - Class in org.hkijena.jipipe.api.parameters

JIPipeParameterCollection that implements the event emitters

AbstractJIPipeParameterCollection() - Constructor for class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection

AbstractJIPipeRunnable - Class in org.hkijena.jipipe.api

Abstract base class for implementing JIPipeRunnable

AbstractJIPipeRunnable() - Constructor for class org.hkijena.jipipe.api.AbstractJIPipeRunnable

AbstractPathImageJDataExporterUI - Class in org.hkijena.jipipe.api.compat.ui

Exporter UI that changes the activation state and the name (based on a path)

AbstractPathImageJDataExporterUI(JIPipeDesktopWorkbench, ImageJDataExportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ui.AbstractPathImageJDataExporterUI

AbstractPathImageJDataImporterUI - Class in org.hkijena.jipipe.api.compat.ui

Importer UI that represents the name as path

AbstractPathImageJDataImporterUI(JIPipeDesktopWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ui.AbstractPathImageJDataImporterUI

AbstractTextBoxAnnotationGraphNode - Class in org.hkijena.jipipe.plugins.graphannotation.nodes

AbstractTextBoxAnnotationGraphNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode

AbstractTextBoxAnnotationGraphNode(AbstractTextBoxAnnotationGraphNode) - Constructor for class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode

AbstractTextBoxAnnotationGraphNode.TextLocationParameters - Class in org.hkijena.jipipe.plugins.graphannotation.nodes

AbstractTextBoxAnnotationGraphNode.TextRenderParameters - Class in org.hkijena.jipipe.plugins.graphannotation.nodes

accept(JIPipeWorkbench) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterCollectionContextAction

accept(Object) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDummyParameterCollection

accept(JIPipeWorkbench) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterCollectionContextAction

accept(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.layout.MSTGraphAutoLayoutImplementation

accept(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.layout.SugiyamaGraphAutoLayoutImplementation

accept(T, U, V) - Method in interface org.hkijena.jipipe.utils.TriConsumer

Performs this operation on the given arguments.

accepts(JIPipeData) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Returns true if the slot can carry the provided data.

accepts(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Returns true if the slot can carry the provided data.

acceptsTrivially(JIPipeData) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Returns true if the slot can carry the provided data.

acceptsTrivially(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Returns true if the slot can carry the provided data.

accessEquals(JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI.ExternalEditor

AccumulateFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

AccumulateFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.AccumulateFunction

acquireReadLock() - Method in class org.hkijena.jipipe.utils.FileLocker

acquireWriteLock() - Method in class org.hkijena.jipipe.utils.FileLocker

Action(Component, int, Insets, boolean) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Action

Action(Component, int, Insets) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Action

Action(List<Component>, int, Insets) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Action

Action(List<Component>, int, Insets, boolean) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Action

Adds multiple components in a row

actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopColorChooserButton

actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor.StrikeThroughAction

Toggles the strikethrough attribute.

actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor.SubscriptAction

Toggles the strikethrough attribute.

actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor.SuperscriptAction

Toggles the strikethrough attribute.

actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.plugins.ilastik.RunIlastikDesktopMenuExtension

actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.plugins.napari.RunNapariDesktopMenuExtension

actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.plugins.parameters.ExpressionTesterJIPipeDesktopMenuExtension

actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.plugins.parameters.ParameterTesterJIPipeDesktopMenuExtension

actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.plugins.plots.NewPlotJIPipeDesktopMenuExtension

actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.plugins.tables.NewTableJIPipeDesktopMenuExtension

actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.utils.CustomStateLessToggleButton

activate() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

activate() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool

activate() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

activate() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool

activate() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

activate() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

activate() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

activateLegacyDockPanel(String) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ImagePlusDataViewer

activatePanel(String, boolean) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

activeAreas - Variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

add(JIPipeDataTableRowInfo) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

add(int, JIPipeDataTableRowInfo) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

add(JIPipeProject, JIPipeDataSlot, JIPipeDataTableInfo) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableInfo

Adds an JIPipeDataTableInfo

add(String, int) - Method in class org.hkijena.jipipe.api.nodes.database.WeightedTokens

Adds a text to tokenize

add(JIPipeParameterCollection, String, JIPipeParameterTree.Node) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Adds a new JIPipeParameterCollection into this collection.

add(JIPipeProjectRunSet) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectRunSetsConfiguration

add(Path) - Method in class org.hkijena.jipipe.api.registries.JIPipeRecentProjectsRegistry

Adds a project file to the list of recent projects

add() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration

Adds a new runtime partition.

add(JIPipeRuntimePartition) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration

add(JIPipeProject, Store<JIPipeDataTable>) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

Adds an JIPipeDataTableInfo

add(Component) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopVerticalToolBar

add(JIPipeDesktopRibbon.Action) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

add(JIPipeDesktopRibbon.Band) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Task

add(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

Adds the value to all components

add(Scene3DNode) - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

add(int, Scene3DNode) - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

add(Component) - Method in class org.hkijena.jipipe.utils.MenuManager

add(Point) - Method in class org.hkijena.jipipe.utils.PointRange

Adds the point's x and y coordinates to all points

add(List<Double>, List<Double>) - Static method in class org.hkijena.jipipe.utils.VectorUtils

addActionListener(ActionListener) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyPasswordField

Adds a listener for when the search text changes

addActionListener(ActionListener) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyReadOnlyTextArea

Adds a listener for when the search text changes

addActionListener(ActionListener) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyReadOnlyTextField

Adds a listener for when the search text changes

addActionListener(ActionListener) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyTextField

Adds a listener for when the search text changes

addActionListener(ActionListener) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPathEditorComponent

Adds a listener for when the path property changes

addActionListener(ActionListener) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopToggleButtonPanel

addActionListener(Runnable) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopCheckBoxRibbonAction

addActionListener(ActionListener) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopCheckBoxRibbonAction

addActionListener(Runnable) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopLargeButtonRibbonAction

addActionListener(ActionListener) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopLargeButtonRibbonAction

addActionListener(Runnable) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopSmallButtonRibbonAction

addActionListener(ActionListener) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopSmallButtonRibbonAction

addActionListener(Runnable) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopToggleButtonRibbonAction

addActionListener(ActionListener) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopToggleButtonRibbonAction

addActionListener(ActionListener) - Method in class org.hkijena.jipipe.desktop.commons.components.search.JIPipeDesktopSearchTextField

Adds a listener for when the search text changes

addAdaptiveParameter(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

addAfterLastOfType(Component, Class<? extends Component>) - Method in class org.hkijena.jipipe.utils.MenuManager

addAlgorithm(JsonNodeInfo) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

Adds a new node type of specified type

addAll(Collection<? extends JIPipeDataTableRowInfo>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

addAll(int, Collection<? extends JIPipeDataTableRowInfo>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

addAll(JIPipeDesktopRibbon.Action...) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

addAll(JIPipeDesktopRibbon.Band...) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Task

addAll(Collection<? extends Scene3DNode>) - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

addAll(int, Collection<? extends Scene3DNode>) - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

addAndModifyRow() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Adds a new row and returns a ResultsTableData.RowBuilder for setting values conveniently

addAnnotation(Annotation) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

addAnnotationColumn(String) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.AnnotationTableData

Adds a new column that contains annotation data and returns its index- If the column already exists, its index is returned.

AddAnnotationColumnsAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.annotations

Algorithm that integrates columns

AddAnnotationColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.annotations.AddAnnotationColumnsAlgorithm

Creates a new instance

AddAnnotationColumnsAlgorithm(AddAnnotationColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.annotations.AddAnnotationColumnsAlgorithm

Creates a copy

addAnnotationIfEnabled(Collection<JIPipeDataAnnotation>, JIPipeData) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalDataAnnotationNameParameter

Adds the annotation with given value of the parameter is enabled

addAnnotationIfEnabled(Collection<JIPipeTextAnnotation>, String) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter

Adds the annotation with given value of the parameter is enabled

addAnnotationIfEnabled(Collection<JIPipeTextAnnotation>, String[]) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter

Adds the annotation with given value of the parameter is enabled

addAnnotationIfEnabled(Collection<JIPipeTextAnnotation>, Collection<String>) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter

Adds the annotation with given value of the parameter is enabled

addAnnotationToAllData(JIPipeTextAnnotation, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Deprecated.

use addTextAnnotationToAllData()

addBalloonToComponent(AbstractButton, String) - Static method in class org.hkijena.jipipe.utils.UIUtils

addBand(String) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Task

addBand(String, String) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Task

AddBookmarkNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

AddBookmarkNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddBookmarkNodeUIContextAction

addBorder(ImagePlus, int, int, int, int, BorderMode, double, Color, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm

AddBorder2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

AddBorder2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm

AddBorder2DAlgorithm(AddBorder2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm

addButton(String, Icon, Consumer<JIPipeDesktopSearchTextField>) - Method in class org.hkijena.jipipe.desktop.commons.components.search.JIPipeDesktopSearchTextField

addCategories(String...) - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

addCategory(String) - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

addCheckBox(String, String, boolean, Consumer<JCheckBox>) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

addChild(String, JIPipeParameterTree.Node) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

addChild(Scene3DNode) - Method in class org.hkijena.jipipe.plugins.scene3d.model.Scene3DGroupNode

addChoosableFileFilter(FileNameExtensionFilter) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

addColumn() - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

Adds a new column

addColumn(ParameterTable.ParameterColumn, Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

Adds a new column to the table

addColumn(String, boolean) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Adds a column with the given name.

addColumn(String, TableColumnData, boolean) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Adds a column with the given name.

addColumns(Collection<ResultsTableData>, boolean, TableColumnNormalization) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Adds columns from another table

addCompartment(String) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Adds a new project compartment

addCompartment() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.JIPipeDesktopCompartmentsGraphEditorUI

addComponent(Component, int, Insets) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

addComponent(Component, int, Insets, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

addContent(GraphNodeParameterReference) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup

Adds a new element into the group.

addContent(Collection<GraphNodeParameterReference>) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup

Adds multiple elements.

addCustomEntriesToTable(UIDefaults) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

Add this theme's custom entries to the defaults table.

addCustomEntriesToTable(UIDefaults) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

Add this theme's custom entries to the defaults table.

addData(JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, JIPipeDataContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Adds a data row

addData(JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Deprecated.

use the overload with the context

addData(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Deprecated.

use the overload with the context

addData(JIPipeData, JIPipeDataContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Adds a data row

addData(JIPipeDataTable, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Deprecated.

use addDataFromSlot

addData(JIPipeDataItemStore, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, JIPipeDataContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Adds data as virtual data reference

addData(JIPipeDataItemStore, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Deprecated.

use the overload with the context

addData(JIPipeDataItemStore, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeDataContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Adds data as virtual data reference

addData(JIPipeDataItemStore, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Deprecated.

use the overload with the context

addData(JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeDataContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Adds data as virtual data reference

addData(JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Deprecated.

use the overload with the context

addDataFromSlot(JIPipeDataTable, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Copies the source slot into this slot.

addDataFromTable(JIPipeDataTable, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Merges the data from the source table into the current one

addDescriptionPopupToTitlePanel(String) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.GroupHeaderPanel

addDescriptionRow(String) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.GroupHeaderPanel

addDockPanel(String, String, Icon, JIPipeDesktopDockPanel.PanelLocation, boolean, int, JComponent) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

addDockPanel(String, String, Icon, JIPipeDesktopDockPanel.PanelLocation, boolean, int, Supplier<JComponent>) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

addEdgeIgnoreLoops(FilamentVertex, FilamentVertex) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

addEdgeIgnoreLoops(FilamentVertex, FilamentVertex, FilamentEdge) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

addEmptySlot(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Ensures that the specified slot is registered to the iteration step

addEntry(JIPipeValidationReportEntry) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopUserFriendlyErrorUI

Adds an entry to the UI

addEscapeListener(JDialog) - Static method in class org.hkijena.jipipe.utils.UIUtils

Makes a JDialog close when the escape key is hit

addFillerGridBagComponent(Container, int, int) - Static method in class org.hkijena.jipipe.utils.UIUtils

Equivalent of Box.verticalGlue() for GridBagLayout

addFirst(Component) - Method in class org.hkijena.jipipe.utils.MenuManager

addFromAnnotations(Class<? extends JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Adds slots from parameter annotations (with autoCreate)

addFromPlugin(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

addFromPopulation(Objects3DPopulation, int, int) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

Adds ROI from a population

addFromTable(JIPipeDataTable, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Deprecated.

use addDataFromTable instead

addFromTemplate(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.plugins.parameters.library.collections.ParameterCollectionList

addFunctions(String...) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser

addGraph(JIPipeGraph, Set<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph

addGraph(JIPipeGraph, Set<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph

addGraph(JIPipeGraph) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunPartitionGraph

addGroupHeader(String, Icon) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Adds a group header

addGroupHeader(String, String, boolean, Icon) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Adds a group header

addGroups(Collection<GraphNodeParameterReferenceGroup>) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection

Adds multiple groups

addInheritanceConversion(JIPipeDataInfo, JIPipeDataInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder

Deprecated.

addInheritanceConversion(Class<? extends JIPipeData>, Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder

Deprecated.

addInputData(JIPipeDataSlot, int) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Adds the data row of a given slot.

addInputData(JIPipeDataSlot, Collection<Integer>) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Adds the data row of a given slot.

addInputSlot(String, String, Class<? extends JIPipeData>, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Adds a new input slot

addInputSlot(String, String, Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Adds an input slot

addInputSlot(String, String, Class<? extends JIPipeData>, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Adds an input slot

addInputSlot(AddJIPipeInputSlot) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Adds an input slot from an annotation

addInputSlot(String, String, Class<? extends JIPipeData>, boolean, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Adds an input slot

addInputSlotForModuleItem(ModuleItem<?>, Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

AdditionalColumn() - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm.AdditionalColumn

Deprecated.

AdditionFunctionOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

AdditionFunctionOperator(int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.AdditionFunctionOperator

AddJIPipeCitation - Annotation Type in org.hkijena.jipipe.api

Interface to add citations to nodes/data types

AddJIPipeCitations - Annotation Type in org.hkijena.jipipe.api

Multiple AddJIPipeCitation

AddJIPipeDesktopNodeQuickAction - Annotation Type in org.hkijena.jipipe.desktop.api.nodes

Marks a method inside a JIPipeGraphNode as a quick action for JIPipe Desktop.

AddJIPipeDocumentationDescription - Annotation Type in org.hkijena.jipipe.api

Allows to separate the description part of a SetJIPipeDocumentation into multiple items.

AddJIPipeDocumentationDescriptions - Annotation Type in org.hkijena.jipipe.api

Container for multiple AddJIPipeDocumentationDescription

AddJIPipeExpressionParameterVariable - Annotation Type in org.hkijena.jipipe.plugins.expressions

Alternative to creating an JIPipeExpressionVariablesInfo class and attaching it to JIPipeExpressionParameterSettings.

AddJIPipeInputSlot - Annotation Type in org.hkijena.jipipe.api.nodes

Annotates an JIPipeGraphNode with an input slot.

AddJIPipeInputSlots - Annotation Type in org.hkijena.jipipe.api.nodes

Required to allow multiple AddJIPipeInputSlot

AddJIPipeNodeAlias - Annotation Type in org.hkijena.jipipe.api.nodes

Annotates a node with an additional menu location

AddJIPipeNodeAliases - Annotation Type in org.hkijena.jipipe.api.nodes

AddJIPipeOutputSlot - Annotation Type in org.hkijena.jipipe.api.nodes

Annotates an JIPipeGraphNode with an output slot.

AddJIPipeOutputSlots - Annotation Type in org.hkijena.jipipe.api.nodes

Required to allow multiple AddJIPipeOutputSlot

addLargeButton(String, String, ImageIcon, Runnable) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

addLargeMenuButton(String, String, ImageIcon, Component...) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

addLargeToggle(String, String, ImageIcon, boolean, Consumer<JToggleButton>) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

addLink(String, Icon, File) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

addLinkCategory(String) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

addMaxProgress(int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

addMergedDataAnnotation(JIPipeDataAnnotation, JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Adds an annotation to the annotation list

addMergedDataAnnotation(JIPipeDataAnnotation, JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Adds an annotation to the annotation list

addMergedDataAnnotations(Collection<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Adds annotations to the annotation list

addMergedDataAnnotations(Collection<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Adds annotations to the annotation list

addMergedTextAnnotation(JIPipeTextAnnotation, JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Adds an annotation to the annotation list

addMergedTextAnnotation(JIPipeTextAnnotation, JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Adds an annotation to the annotation list

addMergedTextAnnotations(Map<String, String>, JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Adds annotations to the merged annotation storage of this interface.

addMergedTextAnnotations(List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Adds annotations to the merged annotation storage of this interface.

addMergedTextAnnotations(Collection<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Adds annotations to the merged annotation storage of this interface.

addMessage(JIPipeDesktopMessagePanel.MessageType, String, boolean, boolean, Component...) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMessagePanel

addMessage(JIPipeDesktopMessagePanel.MessageType, String, boolean, boolean, List<Component>) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMessagePanel

AddMissingRowsInSeriesAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.rows

AddMissingRowsInSeriesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm

AddMissingRowsInSeriesAlgorithm(AddMissingRowsInSeriesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm

AddMissingRowsInSeriesAlgorithm.CounterVariablesInfo - Class in org.hkijena.jipipe.plugins.tables.nodes.rows

AddMissingRowsInSeriesAlgorithm.DefaultValuesVariablesInfo - Class in org.hkijena.jipipe.plugins.tables.nodes.rows

addNameToColumnIdentifiers(DefaultTableModel, String) - Static method in class org.hkijena.jipipe.utils.TableUtils

Adds a name to columns

AddNewCompartmentUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

AddNewCompartmentUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewCompartmentUIContextAction

addNewGroup() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection

Adds a new empty group

addNewInstance() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeatureFilterParameter.List

addNewInstance() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeaturePenaltyParameter.List

addNewInstance() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeatureFilterParameter.List

addNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameter

Adds a new instance of the content class Override this method for types that cannot be default-constructed

addNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.collections.ParameterCollectionList

addNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.colors.ColorListParameter

addNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.filesystem.PathList

addNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.list.DoubleList

addNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.list.FloatList

addNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.list.IntegerList

addNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.list.LongList

addNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.list.StringList

AddNewNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

AddNewNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewNodeUIContextAction

AddNewParameterSetNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

AddNewParameterSetNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewParameterSetNodeUIContextAction

addNodes(Set<JIPipeGraphNode>, JIPipeProjectRunSetsConfiguration) - Method in class org.hkijena.jipipe.api.run.JIPipeProjectRunSet

AddNoise2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise

Wrapper around ImageProcessor

AddNoise2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.AddNoise2DAlgorithm

Instantiates a new node type.

AddNoise2DAlgorithm(AddNoise2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.AddNoise2DAlgorithm

Instantiates a new node type.

addNumericColumn(String) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Adds a string column with the given name.

addOperator(String, int) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser

addOutputData(String, JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Writes output data into the provided slot Please note that annotations should be set up till this point

addOutputData(String, JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Writes output data into the provided slot Please note that annotations should be set up till this point

addOutputData(String, JIPipeData, List<JIPipeTextAnnotation>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Writes output data into the provided slot Please note that annotations should be set up till this point

addOutputData(String, JIPipeDataItemStore, List<JIPipeTextAnnotation>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Writes output data into the provided slot Please note that annotations should be set up till this point

addOutputData(String, JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Writes output data into the provided slot Please note that annotations should be set up till this point

addOutputData(String, JIPipeDataItemStore, JIPipeTextAnnotationMergeMode, List<JIPipeTextAnnotation>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Writes output data into the provided slot Please note that annotations should be set up till this point

addOutputData(JIPipeOutputDataSlot, JIPipeDataItemStore, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

addOutputData(JIPipeOutputDataSlot, JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point

addOutputData(JIPipeOutputDataSlot, JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point

addOutputData(String, JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Writes output data into the provided slot Please note that annotations should be set up till this point

addOutputData(JIPipeOutputDataSlot, JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point

addOutputData(JIPipeOutputDataSlot, JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point

addOutputData(JIPipeOutputDataSlot, JIPipeDataItemStore, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point

addOutputData(String, JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Writes output data into the provided slot Please note that annotations should be set up till this point

addOutputData(String, JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Writes output data into the provided slot Please note that annotations should be set up till this point

addOutputData(String, JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Writes output data into the provided slot Please note that annotations should be set up till this point

addOutputData(JIPipeOutputDataSlot, JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point

addOutputData(JIPipeOutputDataSlot, JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point

addOutputData(JIPipeOutputDataSlot, JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point

addOutputData(JIPipeOutputDataSlot, JIPipeDataItemStore, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point

addOutputSlot(String, String, Class<? extends JIPipeData>, String, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Deprecated.

Inherited slot is non-functional

addOutputSlot(String, String, Class<? extends JIPipeData>, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Adds a new output slot

addOutputSlot(String, String, Class<? extends JIPipeData>, String) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Deprecated.

Slot inheritance is non-functional

addOutputSlot(String, String, Class<? extends JIPipeData>, String, Map<Class<? extends JIPipeData>, Class<? extends JIPipeData>>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Deprecated.

Slot inheritance is non-functional

addOutputSlot(String, String, Class<? extends JIPipeData>, String, Map<Class<? extends JIPipeData>, Class<? extends JIPipeData>>, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Deprecated.

Slot inheritance is non-functional

addOutputSlot(String, String, Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Adds an output slot

addOutputSlot(AddJIPipeOutputSlot) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Adds an output slot from an annotation

addOutputSlot(String, String, Class<? extends JIPipeData>, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Adds an output slot

addOutputSlotForModuleItem(ModuleItem<?>, Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

addOverlay(JIPipeData) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

addOverlay(Object) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

addOverlays(Collection<?>) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

addPanningToScrollPane(JScrollPane) - Static method in class org.hkijena.jipipe.utils.UIUtils

addParameter(JIPipeMutableParameterAccess) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Adds a new parameter.

addParameter(String, Class<?>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Adds a new parameter

addParameter(String, Class<?>, String, String, Annotation...) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

addParameterForModuleItem(String, String, String, Class<?>, ModuleItem<?>) - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNode

addPoint(int, int, float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines

Adds a single point to the hough transform.

addPoints(ImageProcessor, boolean, float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines

Adds points from an image.

addPopupMenuToButton(AbstractButton) - Static method in class org.hkijena.jipipe.utils.UIUtils

Adds a popup menu to a button.

addPopupMenuToButton(AbstractButton, JPopupMenu) - Static method in class org.hkijena.jipipe.utils.UIUtils

Adds an existing popup menu to a button

addPostprocessorCode(StringBuilder, List<JIPipeOutputDataSlot>) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

addPredecessor(JIPipeDataContext) - Method in class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext

addPreset(Class<?>, JIPipeEnvironment) - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry

Adds a new preset into the storage of the environment class

addProgress(int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

addReloadablePopupMenuToButton(AbstractButton, JPopupMenu, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils

Adds an existing popup menu to a button Adds a function that is run before the popup is shown

addReloadableRightClickPopupMenuToButton(AbstractButton, JPopupMenu, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils

Adds an existing popup menu to a button Adds a function that is run before the popup is shown

addRightClickPopupMenuToButton(AbstractButton) - Static method in class org.hkijena.jipipe.utils.UIUtils

Adds an existing popup menu to a button Adds a function that is run before the popup is shown

addRightClickPopupMenuToButton(AbstractButton, JPopupMenu) - Static method in class org.hkijena.jipipe.utils.UIUtils

Adds an existing popup menu to a button Adds a function that is run before the popup is shown

addRightClickPopupMenuToComponent(Component) - Static method in class org.hkijena.jipipe.utils.UIUtils

Adds an existing popup menu to a button Adds a function that is run before the popup is shown

addRightClickPopupMenuToComponent(Component, JPopupMenu) - Static method in class org.hkijena.jipipe.utils.UIUtils

Adds an existing popup menu to a button Adds a function that is run before the popup is shown

addRightClickPopupMenuToJList(JList<?>, JPopupMenu, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils

AddROI3DToManagerDataDisplayOperation - Class in org.hkijena.jipipe.plugins.ij3d.display

AddROI3DToManagerDataDisplayOperation() - Constructor for class org.hkijena.jipipe.plugins.ij3d.display.AddROI3DToManagerDataDisplayOperation

addRow() - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

Adds a new row

addRow(List<Object>) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

Adds a row with raw values.

addRow() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

Creates a new empty row

addRow(Map<String, Object>) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Adds a new row and writes the provided values into the table

addRow() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Adds a new row

addRowBuilder() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Deprecated.

Use addAndModifyRow() instead

addRows(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Adds multiple rows

addRows(ResultsTableData) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Merges another results table into this one

AddSaltAndPepperNoise2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise

Wrapper around ImageProcessor

AddSaltAndPepperNoise2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.AddSaltAndPepperNoise2DAlgorithm

Instantiates a new node type.

AddSaltAndPepperNoise2DAlgorithm(AddSaltAndPepperNoise2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.AddSaltAndPepperNoise2DAlgorithm

Instantiates a new node type.

addSelectionContextPanel(ROIManagerPlugin3DSelectionContextPanel) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

addSelectionContextPanel(FilamentsManagerPlugin2D.SelectionContextPanel) - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

addSelectionContextPanel(SpotsManagerPlugin2D.SelectionContextPanel) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

addSelectionContextPanel(TracksManagerPlugin2D.SelectionContextPanel) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

addSelectionContextPanel(ROIManagerPlugin2DSelectionContextPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

addSeparator() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopVerticalToolBar

addSeparatorIfNeeded(JPopupMenu) - Static method in class org.hkijena.jipipe.utils.UIUtils

Adds a separator if there is at least one component in the menu and the last item is not a separator

addSeparatorIfNeeded(JMenu) - Static method in class org.hkijena.jipipe.utils.UIUtils

Adds a separator if there is at least one component in the menu and the last item is not a separator

addSeries() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

Adds a new series

addSeries(JFreeChartPlotDataSeries) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

Adds a new series into this plot

addSlide(Component, String) - Method in class org.hkijena.jipipe.utils.ui.DotSlideshow

addSlot(String, JIPipeDataSlotInfo, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Adds a slots

addSlot(AddJIPipeInputSlot, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Adds an input slot from an annotation

addSlot(AddJIPipeOutputSlot, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Adds an input slot from an annotation

addSlot(JIPipeDataSlotInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Adds a slot

addSlot(String, JIPipeDataSlotInfo, boolean) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

addSlot(JIPipeDataSlotInfo, boolean) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

addSlot(String, JIPipeDataSlotInfo, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeIOSlotConfiguration

addSmallButton(String, String, ImageIcon, Runnable) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

addSmallMenuButton(String, String, ImageIcon, Component...) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

addSmallToggle(String, String, ImageIcon, boolean, Consumer<JToggleButton>) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

addStop(float, Color) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.LUTData

addStringColumn(String) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Adds a string column with the given name.

addTab(String, Icon, Component, JIPipeDesktopTabPane.CloseMode, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Adds a new tab

addTab(String, Icon, Component, JIPipeDesktopTabPane.CloseMode) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Adds a new tab

addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableInfo

addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantTableModel

addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableModel

addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableModel

addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerTableModel

addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextTableModel

addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

addTask(String) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon

Adds a new task.

addTask(String, String) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon

Adds a new task.

AddTemplateContextMenuAction - Class in org.hkijena.jipipe.plugins.nodetemplate

AddTemplateContextMenuAction() - Constructor for class org.hkijena.jipipe.plugins.nodetemplate.AddTemplateContextMenuAction

addTextAnnotationToAllData(JIPipeTextAnnotation, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Adds an annotation to all existing data

addTo(JIPipeProject, String) - Method in class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment

Adds the compartment to a project as the specified compartment name

addToForm(T, Component) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Adds a component to the form

addToForm(T, Component, MarkdownText) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Adds a component to the form

addToggleButton(String, Icon, T) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopToggleButtonPanel

addToggleButton(String, String, Icon, T) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopToggleButtonPanel

addToggleButton(JToggleButton, T) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopToggleButtonPanel

addToggleButton(JToggleButton, ImageViewerPanelCanvas2D) - Method in interface org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2DTool

Adds events to JToggleButton that acts as control for the tool

addToGlobal(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

addToGlobal(Collection<JIPipeNodeTemplate>) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

addToGlobal_(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

addToGraph(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewCompartmentNodeDatabaseEntry

addToGraph(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

addToGraph(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

addToGraph(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

addToGraph(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

addToGraph(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

addToGraph(JIPipeDesktopGraphCanvasUI) - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry

addToken(char[], int, int, int, int, boolean) - Method in class org.hkijena.jipipe.plugins.r.ui.RTokenMaker

Adds the token specified to the current linked list of tokens.

addToOverlay() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

addToProject(JIPipeNodeTemplate, JIPipeProject) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

addToProject(Collection<JIPipeNodeTemplate>, JIPipeProject) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

addToProject_(JIPipeNodeTemplate, JIPipeProject) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

addToRoiManager(RoiManager) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Adds the ROI to an existing ROI manager instance

AddToROIManagerDataDisplayOperation - Class in org.hkijena.jipipe.plugins.imagejdatatypes.display

AddToROIManagerDataDisplayOperation() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.display.AddToROIManagerDataDisplayOperation

addToSelection(JIPipeDesktopGraphNodeUI) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

Adds an algorithm to the selection

addToSelection(JIPipeDesktopGraphNodeUI) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Adds an algorithm to the selection

addToStatusBarWithSeparator(JComponent, JComponent) - Static method in class org.hkijena.jipipe.utils.UIUtils

addToTable(ResultsTable) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Adds the table to an existing table

addToTitlePanel(Component) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.GroupHeaderPanel

Adds a component on the right hand side

addUser(Object) - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore

Marks the provided object as user of this data

addVerticalGlue() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Adds a component that acts as Box.verticalGlue()

addVerticalGlue(Component, MarkdownText) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Adds a vertical glue component

addWideToForm(T) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Adds a component.

addWideToForm(T, MarkdownText) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Adds a component.

adjustmentValueChanged(AdjustmentEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorMinimap

AdvancedTurboRegParameters - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg

AdvancedTurboRegParameters() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.AdvancedTurboRegParameters

AdvancedTurboRegParameters(AdvancedTurboRegParameters) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.AdvancedTurboRegParameters

afterSetRow() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

Called after the data row was changed

afterSetRow() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.algorithms.TrackmateLegacyCacheDataViewerWindow

afterSetRow() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.trackscheme.TrackSchemeLegacyCacheDataViewerWindow

afterSetRow() - Method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersLegacyDataViewerWindow

afterSetRow() - Method in class org.hkijena.jipipe.plugins.strings.TextLegacyCacheDataViewerWindow

afterSetRow() - Method in class org.hkijena.jipipe.plugins.tables.display.TableViewerLegacyCacheDataViewerWindow

AlgorithmGraphCopyNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu

AlgorithmGraphCopyNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphCopyNodeUIContextAction

AlgorithmGraphCutNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu

AlgorithmGraphCutNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphCutNodeUIContextAction

AlgorithmGraphDuplicateNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu

AlgorithmGraphDuplicateNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphDuplicateNodeUIContextAction

AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu

AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction

AlgorithmGraphPasteNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu

AlgorithmGraphPasteNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphPasteNodeUIContextAction

AlignedImage5DSliceIndexExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

AlignedImage5DSliceIndexExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.AlignedImage5DSliceIndexExpressionParameterVariablesInfo

alignImage2D(ImagePlus, ImagePlus, TurboRegTransformationType, AdvancedTurboRegParameters) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegUtils

ALL_DESCRIPTIONS - Static variable in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.ImageStatisticsSetParameter

AllFilamentComponentVariablesInfo - Class in org.hkijena.jipipe.plugins.ijfilaments.util

AllFilamentComponentVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.AllFilamentComponentVariablesInfo

AllFilamentEdgeVariablesInfo - Class in org.hkijena.jipipe.plugins.ijfilaments.util

AllFilamentEdgeVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.AllFilamentEdgeVariablesInfo

AllFilamentVertexVariablesInfo - Class in org.hkijena.jipipe.plugins.ijfilaments.util

AllFilamentVertexVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.AllFilamentVertexVariablesInfo

AllMeasurementExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util.measure

A variable source that contains the ImageJ measurements.

AllMeasurementExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.AllMeasurementExpressionParameterVariablesInfo

ALLOWED_PARAMETER_CLASSES - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.MacroWrapperAlgorithm

ALLOWED_PARAMETER_CLASSES - Static variable in class org.hkijena.jipipe.plugins.python.PythonUtils

ALLOWED_PARAMETER_CLASSES - Static variable in class org.hkijena.jipipe.plugins.r.RUtils

ALLOWED_PARAMETER_TYPES - Static variable in class org.hkijena.jipipe.plugins.clij2.CLIJPlugin

ALLOWED_VALUES - Static variable in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.EdgeFeature

ALLOWED_VALUES - Static variable in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeature

ALLOWED_VALUES - Static variable in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeature

allowsDragConnections() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

allowsDragConnections() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

allowsDragConnections() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

allowsDragConnections() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

allowsDragConnections() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeToggleableGraphEditorTool

allowsDragConnections() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

allowsDragNodes() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

allowsDragNodes() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

allowsDragNodes() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

allowsDragNodes() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

allowsDragNodes() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeToggleableGraphEditorTool

allowsDragNodes() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

allowsInputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

allowsInputSlots() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

allowsOutputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

allowsOutputSlots() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

AllROI3DMeasurementExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.ij3d.utils

A variable source that contains the ImageJ measurements.

AllROI3DMeasurementExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.AllROI3DMeasurementExpressionParameterVariablesInfo

AllROI3DRelationMeasurementExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.ij3d.utils

A variable source that contains the ImageJ measurements.

AllROI3DRelationMeasurementExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.AllROI3DRelationMeasurementExpressionParameterVariablesInfo

AlternatingMorphologicalFilters2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

AlternatingMorphologicalFilters2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.AlternatingMorphologicalFilters2DAlgorithm

AlternatingMorphologicalFilters2DAlgorithm(AlternatingMorphologicalFilters2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.AlternatingMorphologicalFilters2DAlgorithm

AnalyzeSkeleton2D3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze

AnalyzeSkeleton2D3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm

AnalyzeSkeleton2D3DAlgorithm(AnalyzeSkeleton2D3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm

AnalyzeSkeleton2D3DAlgorithm.CycleRemovalMethod - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze

AnalyzeSkeleton2D3DAlgorithm.EndRemovalMethod - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze

AnalyzeSkeleton2D3DAlgorithm.OutputParameters - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze

Anchor - Enum in org.hkijena.jipipe.plugins.parameters.library.roi

An anchor

AnchorDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.roi

Editor for Margin

AnchorDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.AnchorDesktopParameterEditorUI

AnchorParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.parameters.library.roi

Allows to modify the behavior of the Anchor parameter editor UI

ANIMATION_DELAY - Static variable in class org.hkijena.jipipe.desktop.commons.components.icons.SpinnerIcon

ANIMATION_DELAY - Static variable in class org.hkijena.jipipe.desktop.commons.components.search.JIPipeDesktopSearchTextField

ANIMATION_SPEED - Static variable in class org.hkijena.jipipe.desktop.commons.components.search.JIPipeDesktopSearchTextField

AnnotateByExpression - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Algorithm that annotates all data with the same annotation

AnnotateByExpression(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByExpression

AnnotateByExpression(AnnotateByExpression) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByExpression

Copies the algorithm

AnnotateByExpression.VariablesInfo - Class in org.hkijena.jipipe.plugins.annotation.algorithms

AnnotateByImageStatisticsExpressionAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze

Wrapper around RoiManager

AnnotateByImageStatisticsExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnnotateByImageStatisticsExpressionAlgorithm

Instantiates a new node type.

AnnotateByImageStatisticsExpressionAlgorithm(AnnotateByImageStatisticsExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnnotateByImageStatisticsExpressionAlgorithm

Instantiates a new node type.

AnnotateByProjectPaths - Class in org.hkijena.jipipe.plugins.annotation.algorithms

AnnotateByProjectPaths(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByProjectPaths

AnnotateByProjectPaths(AnnotateByProjectPaths) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByProjectPaths

AnnotateByProjectPaths.Entry - Class in org.hkijena.jipipe.plugins.annotation.algorithms

AnnotateByTablePropertiesAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.annotations

AnnotateByTablePropertiesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm

AnnotateByTablePropertiesAlgorithm(AnnotateByTablePropertiesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm

AnnotateDataWithImagePropertiesAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate

Adds data annotations that contain the image properties

AnnotateDataWithImagePropertiesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

Creates a new instance

AnnotateDataWithImagePropertiesAlgorithm(AnnotateDataWithImagePropertiesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

Creates a copy

AnnotateDataWithTableValues - Class in org.hkijena.jipipe.plugins.tables.nodes.annotations

AnnotateDataWithTableValues(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateDataWithTableValues

AnnotateDataWithTableValues(AnnotateDataWithTableValues) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateDataWithTableValues

AnnotateDataWithTableValues.AnnotationSettings - Class in org.hkijena.jipipe.plugins.tables.nodes.annotations

AnnotateOMERODatasetReferenceAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.annotate

AnnotateOMERODatasetReferenceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm

AnnotateOMERODatasetReferenceAlgorithm(AnnotateOMERODatasetReferenceAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm

AnnotateOMEROImageReferenceAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.annotate

AnnotateOMEROImageReferenceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm

AnnotateOMEROImageReferenceAlgorithm(AnnotateOMEROImageReferenceAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm

AnnotateOMEROPlateReferenceAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.annotate

AnnotateOMEROPlateReferenceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROPlateReferenceAlgorithm

AnnotateOMEROPlateReferenceAlgorithm(AnnotateOMEROPlateReferenceAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROPlateReferenceAlgorithm

AnnotateOMEROProjectReferenceAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.annotate

AnnotateOMEROProjectReferenceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm

AnnotateOMEROProjectReferenceAlgorithm(AnnotateOMEROProjectReferenceAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm

AnnotateOMEROScreenReferenceAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.annotate

AnnotateOMEROScreenReferenceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

AnnotateOMEROScreenReferenceAlgorithm(AnnotateOMEROScreenReferenceAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

AnnotateOMEROWellReferenceAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.annotate

AnnotateOMEROWellReferenceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

AnnotateOMEROWellReferenceAlgorithm(AnnotateOMEROWellReferenceAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

AnnotateOMEWithMetadataAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome

AnnotateOMEWithMetadataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm

AnnotateOMEWithMetadataAlgorithm(AnnotateOMEWithMetadataAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm

AnnotateOMEWithMetadataAlgorithm.Entry - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome

AnnotateWithAnnotationTable - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Algorithm that merges the annotations of all inputs and outputs the data with the shared annotations

AnnotateWithAnnotationTable(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithAnnotationTable

Creates a new instance

AnnotateWithAnnotationTable(AnnotateWithAnnotationTable) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithAnnotationTable

Creates a copy

AnnotateWithData - Class in org.hkijena.jipipe.plugins.annotation.algorithms

AnnotateWithData(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithData

AnnotateWithData(AnnotateWithData) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithData

AnnotateWithDataString - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Generates annotations from filenames

AnnotateWithDataString(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithDataString

New instance

AnnotateWithDataString(AnnotateWithDataString) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithDataString

Copies the algorithm

AnnotateWithDataTableProperties - Class in org.hkijena.jipipe.plugins.utils.algorithms.datatable

AnnotateWithDataTableProperties(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.datatable.AnnotateWithDataTableProperties

AnnotateWithDataTableProperties(AnnotateWithDataTableProperties) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.datatable.AnnotateWithDataTableProperties

AnnotateWithJsonDataAlgorithm - Class in org.hkijena.jipipe.plugins.strings.nodes.json

AnnotateWithJsonDataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.json.AnnotateWithJsonDataAlgorithm

AnnotateWithJsonDataAlgorithm(AnnotateWithJsonDataAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.json.AnnotateWithJsonDataAlgorithm

AnnotateWithJsonDataAlgorithm.Entry - Class in org.hkijena.jipipe.plugins.strings.nodes.json

AnnotateWithOverlapMeasureLabelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

AnnotateWithOverlapMeasureLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm

AnnotateWithOverlapMeasureLabelsAlgorithm(AnnotateWithOverlapMeasureLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm

AnnotateWithPathProperties - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

AnnotateWithPathProperties(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotateWithPathProperties

AnnotateWithPathProperties(AnnotateWithPathProperties) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotateWithPathProperties

AnnotateWithSourceSlot - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Generates annotations from filenames

AnnotateWithSourceSlot(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithSourceSlot

New instance

AnnotateWithSourceSlot(AnnotateWithSourceSlot) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithSourceSlot

Copies the algorithm

AnnotateWithTextDataAlgorithm - Class in org.hkijena.jipipe.plugins.strings.nodes.text

AnnotateWithTextDataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.text.AnnotateWithTextDataAlgorithm

AnnotateWithTextDataAlgorithm(AnnotateWithTextDataAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.text.AnnotateWithTextDataAlgorithm

AnnotateWithTextDataAlgorithm.Entry - Class in org.hkijena.jipipe.plugins.strings.nodes.text

AnnotateWithXPathDataAlgorithm - Class in org.hkijena.jipipe.plugins.strings.nodes.xml

AnnotateWithXPathDataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.xml.AnnotateWithXPathDataAlgorithm

AnnotateWithXPathDataAlgorithm(AnnotateWithXPathDataAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.xml.AnnotateWithXPathDataAlgorithm

AnnotateWithXPathDataAlgorithm.Entry - Class in org.hkijena.jipipe.plugins.strings.nodes.xml

AnnotationFilterExpression - Class in org.hkijena.jipipe.plugins.annotation.algorithms

AnnotationFilterExpression() - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotationFilterExpression

AnnotationFilterExpression(String) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotationFilterExpression

AnnotationFilterExpression(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotationFilterExpression

AnnotationGeneratorExpression - Class in org.hkijena.jipipe.plugins.expressions

An expression that is used to generate annotations for data

AnnotationGeneratorExpression() - Constructor for class org.hkijena.jipipe.plugins.expressions.AnnotationGeneratorExpression

AnnotationGeneratorExpression(String) - Constructor for class org.hkijena.jipipe.plugins.expressions.AnnotationGeneratorExpression

AnnotationGeneratorExpression(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.plugins.expressions.AnnotationGeneratorExpression

AnnotationGeneratorExpressionVariablesInfo - Class in org.hkijena.jipipe.plugins.expressions

AnnotationGeneratorExpressionVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.expressions.AnnotationGeneratorExpressionVariablesInfo

annotationListToMap(Collection<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode) - Static method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

Converts a set of annotations to a map

annotationListToPython(Collection<JIPipeTextAnnotation>) - Static method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

Converts a list of annotations into a Python dictionary

annotationMapToPython(Map<String, JIPipeTextAnnotation>) - Static method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

Converts a map of annotations into a Python dictionary

AnnotationQueryExpression - Class in org.hkijena.jipipe.plugins.expressions

An expression that is used to query annotations

AnnotationQueryExpression() - Constructor for class org.hkijena.jipipe.plugins.expressions.AnnotationQueryExpression

AnnotationQueryExpression(String) - Constructor for class org.hkijena.jipipe.plugins.expressions.AnnotationQueryExpression

AnnotationQueryExpression(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.plugins.expressions.AnnotationQueryExpression

AnnotationQueryExpressionVariablesInfo - Class in org.hkijena.jipipe.plugins.expressions

AnnotationQueryExpressionVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.expressions.AnnotationQueryExpressionVariablesInfo

ANNOTATIONS_VARIABLE - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameterVariableInfo

AnnotationSettings() - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateDataWithTableValues.AnnotationSettings

AnnotationsNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories

AnnotationsNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory

AnnotationsPlugin - Class in org.hkijena.jipipe.plugins.annotation

Extension that provides data types and algorithms to modify data annotations

AnnotationsPlugin() - Constructor for class org.hkijena.jipipe.plugins.annotation.AnnotationsPlugin

AnnotationsToOMEROKeyValuePairExporter - Class in org.hkijena.jipipe.plugins.omero.parameters

AnnotationsToOMEROKeyValuePairExporter() - Constructor for class org.hkijena.jipipe.plugins.omero.parameters.AnnotationsToOMEROKeyValuePairExporter

AnnotationsToOMEROKeyValuePairExporter(AnnotationsToOMEROKeyValuePairExporter) - Constructor for class org.hkijena.jipipe.plugins.omero.parameters.AnnotationsToOMEROKeyValuePairExporter

AnnotationsToOMEROTagExporter - Class in org.hkijena.jipipe.plugins.omero.parameters

AnnotationsToOMEROTagExporter() - Constructor for class org.hkijena.jipipe.plugins.omero.parameters.AnnotationsToOMEROTagExporter

AnnotationsToOMEROTagExporter(AnnotationsToOMEROTagExporter) - Constructor for class org.hkijena.jipipe.plugins.omero.parameters.AnnotationsToOMEROTagExporter

AnnotationsToParametersAlgorithm - Class in org.hkijena.jipipe.plugins.multiparameters.nodes

AnnotationsToParametersAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.AnnotationsToParametersAlgorithm

AnnotationsToParametersAlgorithm(AnnotationsToParametersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.AnnotationsToParametersAlgorithm

annotationsToPython(StringBuilder, Collection<JIPipeTextAnnotation>) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

Converts annotations into Python code.

AnnotationTableData - Class in org.hkijena.jipipe.plugins.tables.datatypes

A special kind of ResultsTableData that stores annotation columns.

AnnotationTableData() - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.AnnotationTableData

AnnotationTableData(Map<String, TableColumnData>) - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.AnnotationTableData

AnnotationTableData(Collection<TableColumnData>) - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.AnnotationTableData

AnnotationTableData(ResultsTable) - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.AnnotationTableData

AnnotationTableData(ResultsTableData) - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.AnnotationTableData

AnnotationTableFromFile - Class in org.hkijena.jipipe.plugins.annotation.datasources

Imports AnnotationTableData from a file

AnnotationTableFromFile(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.datasources.AnnotationTableFromFile

AnnotationTableFromFile(AnnotationTableFromFile) - Constructor for class org.hkijena.jipipe.plugins.annotation.datasources.AnnotationTableFromFile

Copies the algorithm

AnnotationTableToPaths - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Filters input files

AnnotationTableToPaths(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotationTableToPaths

Instantiates the algorithm

AnnotationTableToPaths(AnnotationTableToPaths) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotationTableToPaths

Copies the algorithm

AnnotationToPath - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Filters input files

AnnotationToPath(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotationToPath

Instantiates the algorithm

AnnotationToPath(AnnotationToPath) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotationToPath

Copies the algorithm

annotationType() - Method in class org.hkijena.jipipe.api.JIPipeDocumentation

annotationType() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeInputSlot

annotationType() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeOutputSlot

AnyClassFilter - Class in org.hkijena.jipipe.utils.classfilters

AnyClassFilter() - Constructor for class org.hkijena.jipipe.utils.classfilters.AnyClassFilter

APIErrorValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts

APIErrorValidationReportContext() - Constructor for class org.hkijena.jipipe.api.validation.contexts.APIErrorValidationReportContext

APIErrorValidationReportContext(JIPipeValidationReportContext) - Constructor for class org.hkijena.jipipe.api.validation.contexts.APIErrorValidationReportContext

AppendRectangularRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate

Deprecated.

AppendRectangularRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.AppendRectangularRoiAlgorithm

Deprecated.

Instantiates a new node type.

AppendRectangularRoiAlgorithm(AppendRectangularRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.AppendRectangularRoiAlgorithm

Deprecated.

Instantiates a new node type.

appendTransformation(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformer

Append the current landmarks into a text file.

apply(JIPipeDataTable, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compat.ImageJDataExportOperation

apply(List<Object>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compat.ImageJDataImportOperation

apply(double, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.NumericFunctionExpression

apply(Object) - Method in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderUI.EntryToStringFunction

apply(ImageProcessor, ImageProcessor, ImageProcessor, Neighborhood2D) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.SeparateTouchingLabels2DAlgorithm

apply(JIPipeExpressionVariablesMap, ImagePlus, ImagePlus, ImageSliceIndex) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.AlignedImage5DSliceIndexExpressionParameterVariablesInfo

apply(JIPipeExpressionVariablesMap, ImagePlus, ImageSliceIndex) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Image5DSliceIndexExpressionParameterVariablesInfo

apply(ImagePlus, ImageProcessor) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.ApplyDisplayContrastAlgorithm

apply(double) - Method in enum org.hkijena.jipipe.plugins.parameters.library.colors.ColorMap

Generates a color according to the color map

apply(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtraction

apply(Collection<Boolean>) - Method in enum org.hkijena.jipipe.plugins.parameters.library.util.LogicalOperation

Apply the logical operation for the items

apply(TableColumnData) - Method in interface org.hkijena.jipipe.plugins.tables.ColumnOperation

Applies the operation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.AbsoluteColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.ArcusCosineColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.ArcusSineColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.ArcusTangentColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.CeilingColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.ClampNegativeColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.ClampPositiveColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.CosineColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.DegreeToRadiansColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.ExpColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.FactorizeColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.FloorColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.HyperbolicCosineColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.HyperbolicSineColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.HyperbolicTangentColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.LnColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.Log10ColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.OccurrencesColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.RadiansToDegreeColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.RemoveNaNColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.RoundColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.SignColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.SineColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.SortAscendingColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.SortDescendingColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.SqrtColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.SquareColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.TangentColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.ToNumericColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.converting.ToStringColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.integrating.GetFirstSummarizingColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.integrating.GetLastSummarizingColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.integrating.MergeToJsonSummarizingColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsAverageSummarizingColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsCountNonZeroSummarizingColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsCountSummarizingColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsCumulativeSumColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsGeometricMeanSummarizingColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsKurtosisSummarizingColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsMaxSummarizingColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsMedianSummarizingColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsMinSummarizingColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsModeSummarizingColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsSkewnessSummarizingColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsStandardDeviationSummarizingColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsVarianceSummarizingColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsWeightedSumColumnOperation

apply(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.operations.integrating.SumSummarizingColumnOperation

apply(Integer) - Method in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.DynamicSidebarRatio

apply(Integer) - Method in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.FixedRatio

ApplyColorMathExpression2DExpression - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

ApplyColorMathExpression2DExpression(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyColorMathExpression2DExpression

ApplyColorMathExpression2DExpression(ApplyColorMathExpression2DExpression) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyColorMathExpression2DExpression

applyConfigurationFromArtifact(JIPipeLocalArtifact, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.environments.JIPipeArtifactEnvironment

Applies the artifact configuration to the current environment if isLoadFromArtifact() is true

applyConfigurationFromArtifact(JIPipeLocalArtifact, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironment

applyConfigurationFromArtifact(JIPipeLocalArtifact, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.environments.TSOAXEnvironment

applyConfigurationFromArtifact(JIPipeLocalArtifact, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijocr.environments.TesseractOCREnvironment

applyConfigurationFromArtifact(JIPipeLocalArtifact, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ilastik.environments.IlastikEnvironment

applyConfigurationFromArtifact(JIPipeLocalArtifact, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonAdapterLibraryEnvironment

applyConfigurationFromArtifact(JIPipeLocalArtifact, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.python.PythonEnvironment

applyConfigurationFromArtifact(JIPipeLocalArtifact, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.r.REnvironment

applyConfigurationFromArtifactAndSetLastArtifact(JIPipeLocalArtifact, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.environments.JIPipeArtifactEnvironment

Applies the artifact configuration to the current environment if isLoadFromArtifact() is true Also sets the last loaded artifact

applyCustomCalibration() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl

ApplyDisplayContrastAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms

ApplyDisplayContrastAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.ApplyDisplayContrastAlgorithm

ApplyDisplayContrastAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.ApplyDisplayContrastAlgorithm

ApplyDistanceTransform2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap

Wrapper around EDM

ApplyDistanceTransform2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ApplyDistanceTransform2DAlgorithm

Instantiates a new node type.

ApplyDistanceTransform2DAlgorithm(ApplyDistanceTransform2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ApplyDistanceTransform2DAlgorithm

Instantiates a new node type.

ApplyExpressionPerLabelAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.transform

ApplyExpressionPerLabelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm

ApplyExpressionPerLabelAlgorithm(ApplyExpressionPerLabelAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm

ApplyExpressionPerRowAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.rows

Deprecated.

ApplyExpressionPerRowAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm

Deprecated.

ApplyExpressionPerRowAlgorithm(ApplyExpressionPerRowAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm

Deprecated.

ApplyExpressionPerRowAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.tables.nodes.rows

Deprecated.

ApplyExpressionPerRowAlgorithm2 - Class in org.hkijena.jipipe.plugins.tables.nodes.rows

ApplyExpressionPerRowAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2

ApplyExpressionPerRowAlgorithm2(ApplyExpressionPerRowAlgorithm2) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2

ApplyExpressionPerRowAlgorithm2.Entry - Class in org.hkijena.jipipe.plugins.tables.nodes.rows

ApplyExpressionPerRowAlgorithm2.VariablesInfo - Class in org.hkijena.jipipe.plugins.tables.nodes.rows

ApplyExpressionToColumnsAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.columns

Deprecated.

ApplyExpressionToColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.ApplyExpressionToColumnsAlgorithm

Deprecated.

Creates a new instance

ApplyExpressionToColumnsAlgorithm(ApplyExpressionToColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.ApplyExpressionToColumnsAlgorithm

Deprecated.

Creates a copy

ApplyExpressionToTableByColumnAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.columns

Algorithm that integrates columns

ApplyExpressionToTableByColumnAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.ApplyExpressionToTableByColumnAlgorithm

Creates a new instance

ApplyExpressionToTableByColumnAlgorithm(ApplyExpressionToTableByColumnAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.ApplyExpressionToTableByColumnAlgorithm

Creates a copy

ApplyExpressionToTableByColumnAlgorithm.ProcessingItem - Class in org.hkijena.jipipe.plugins.tables.nodes.columns

applyLUT(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.LUTInverterAlgorithm

applyLUT() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerLUTEditor

applyLUT() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerOpacityLUTEditor

applyLUT() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DLUTEditor

ApplyLUTAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut

ApplyLUTAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.ApplyLUTAlgorithm

ApplyLUTAlgorithm(ApplyLUTAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.ApplyLUTAlgorithm

ApplyMathExpression2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Wrapper around ImageProcessor

ApplyMathExpression2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyMathExpression2DAlgorithm

Instantiates a new node type.

ApplyMathExpression2DAlgorithm(ApplyMathExpression2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyMathExpression2DAlgorithm

Instantiates a new node type.

applyOperation(List<ResultsTableData.Index>, ConvertingColumnOperation) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Applies an operation to the selected cells

applyRatio() - Method in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane

applyRGB(ImagePlus, ImageProcessor) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.ApplyDisplayContrastAlgorithm

applyRGBStack(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.ApplyDisplayContrastAlgorithm

applyTemplateToItems() - Method in class org.hkijena.jipipe.plugins.parameters.library.collections.ParameterCollectionList

Applies the entries of the current template to all items (adding/removing/changing items)

applyThemeToCodeEditor(RSyntaxTextArea) - Static method in class org.hkijena.jipipe.utils.UIUtils

applyTo(Roi, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualLocationROIProperties

applyTo(Roi, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualROIProperties

applyToRoi(Roi) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

applyToRoiReference(Roi, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualLocationROIProperties

Note that this is without cloning the ROI

applyToRoiReference(Roi, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualROIProperties

Note that this is without cloning the ROI

ApplyTransform2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Wrapper around ImageProcessor

ApplyTransform2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyTransform2DAlgorithm

Instantiates a new node type.

ApplyTransform2DAlgorithm(ApplyTransform2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyTransform2DAlgorithm

Instantiates a new node type.

ApplyTransform2DAlgorithm.Transformation - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Available transformation functions

ApplyVectorMathExpression2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Wrapper around ImageProcessor

ApplyVectorMathExpression2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm

Instantiates a new node type.

ApplyVectorMathExpression2DAlgorithm(ApplyVectorMathExpression2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm

Instantiates a new node type.

archive(JIPipeWriteDataStorage, JIPipeWriteDataStorage) - Method in class org.hkijena.jipipe.api.project.JIPipeArchiveProjectRun

archiveTo(JIPipeWriteDataStorage, JIPipeWriteDataStorage, JIPipeProgressInfo, Path) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Called when the node is being archived into the specified storage.

archiveTo(JIPipeWriteDataStorage, JIPipeWriteDataStorage, JIPipeProgressInfo, Path) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileDataSource

archiveTo(JIPipeWriteDataStorage, JIPipeWriteDataStorage, JIPipeProgressInfo, Path) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileListDataSource

archiveTo(JIPipeWriteDataStorage, JIPipeWriteDataStorage, JIPipeProgressInfo, Path) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderDataSource

archiveTo(JIPipeWriteDataStorage, JIPipeWriteDataStorage, JIPipeProgressInfo, Path) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderListDataSource

archiveTo(JIPipeWriteDataStorage, JIPipeWriteDataStorage, JIPipeProgressInfo, Path) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathDataSource

archiveTo(JIPipeWriteDataStorage, JIPipeWriteDataStorage, JIPipeProgressInfo, Path) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathListDataSource

ArchiveUtils - Class in org.hkijena.jipipe.utils

ArchiveUtils() - Constructor for class org.hkijena.jipipe.utils.ArchiveUtils

ArcusCosineColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a sine function

ArcusCosineColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.ArcusCosineColumnOperation

ArcusSineColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a sine function

ArcusSineColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.ArcusSineColumnOperation

ArcusTangentColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a sine function

ArcusTangentColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.ArcusTangentColumnOperation

argbToMultiChannel(ImgPlus<ARGBType>) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.ImgUtils

Treat alpha, red, green, and blue values in ARGBType image as a separate, last channel dimension.

ArrangeChannelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

Wrapper around ChannelArranger

ArrangeChannelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm

Instantiates a new node type.

ArrangeChannelsAlgorithm(ArrangeChannelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm

Creates a copy

ArrayUtils - Class in org.hkijena.jipipe.utils

ArrayUtils() - Constructor for class org.hkijena.jipipe.utils.ArrayUtils

ArrowAnnotationGraphNode - Class in org.hkijena.jipipe.plugins.graphannotation.nodes

ArrowAnnotationGraphNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.graphannotation.nodes.ArrowAnnotationGraphNode

ArrowAnnotationGraphNode(ArrowAnnotationGraphNode) - Constructor for class org.hkijena.jipipe.plugins.graphannotation.nodes.ArrowAnnotationGraphNode

ArrowAnnotationGraphNodeTool - Class in org.hkijena.jipipe.plugins.graphannotation.tools

ArrowAnnotationGraphNodeTool() - Constructor for class org.hkijena.jipipe.plugins.graphannotation.tools.ArrowAnnotationGraphNodeTool

ArtifactEntry(JIPipeArtifact) - Constructor for class org.hkijena.jipipe.desktop.app.plugins.artifactsmanager.JIPipeDesktopArtifactManagerUI.ArtifactEntry

ArtifactEntryListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.plugins.artifactsmanager.JIPipeDesktopArtifactManagerUI.ArtifactEntryListCellRenderer

ArtifactEnumItemInfo() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeDesktopArtifactQueryParameterEditorUI.ArtifactEnumItemInfo

ArtifactsPlugin - Class in org.hkijena.jipipe.plugins.artifacts

The core extension

ArtifactsPlugin() - Constructor for class org.hkijena.jipipe.plugins.artifacts.ArtifactsPlugin

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.annotation.AnnotationsPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.artifacts.ArtifactsPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.cellpose.CellposePlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.clij2.CLIJPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.core.CorePlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.filesystem.FilesystemPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.forms.FormsPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.ij3d.IJ3DPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.ijocr.OCRPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.ijtrackmate.TrackMatePlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.ijweka.WekaPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.ilastik.IlastikPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.imagej2.ImageJ2Plugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.ImageJAlgorithmsPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.imp.ImpPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.multiparameters.MultiParameterAlgorithmsPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.napari.NapariPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.omero.OMEROPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.omnipose.OmniposePlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.opencv.OpenCvPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.plots.PlotsPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.python.CorePythonPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.python.PythonPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.r.RPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.scene3d.Scene3DPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.strings.StringsPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.tables.TablesPlugin

Dependency instance to be used for creating the set of dependencies

AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.plugins.utils.UtilitiesPlugin

Dependency instance to be used for creating the set of dependencies

askOpenInCurrentWindow(Component, String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Asks the user how to open a project: In the current window or a new window

AssembleExtractedROIAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble

AssembleExtractedROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm

AssembleExtractedROIAlgorithm(AssembleExtractedROIAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm

assert2DImage(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

assert3DImage(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

assert4DImage(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

assert5DImage(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

assertImageDimensions(ImagePlus, int) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

assignData(String, TableColumnData) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotSeriesEditor

Assigns data to a column

assignSnakesIdsToTrackIds(List<List<Integer>>) - Static method in class org.hkijena.jipipe.plugins.ijfilaments.util.TSOAXUtils

attach(Class<?>, Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Attaches an object as the specified type Warning: Attachments are not serialized

attach(Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Attaches the object with its class as key.

attachAdditionalMetadata(String, JIPipeMetadataObject) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Attaches additional metadata (persistent)

attachKeyValuePairs(Map<String, String>, DataObject, SecurityContext) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROGateway

attachTags(Set<String>, DataObject, SecurityContext) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROGateway

AUTO_THRESHOLDER - Static variable in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdFunction

autoConfigureDesktopQuickAction(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersTableAlgorithm

autoCreateSlots() - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

Automatically creates slots that connect all inputs

autoExpandLeftTop() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

autoLayout() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Applies a full auto-layout method

autoLayoutAll() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Auto-layouts all UIs

autoPlaceCloseToCursor(JIPipeDesktopGraphNodeUI, boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

autoPlaceCloseToLocation(JIPipeDesktopGraphNodeUI, Point) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Moves the node close to a real location

autoScrollTest(Point) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPane

autoSizeColumns() - Method in class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopTableEditor

Auto-sizes all columns

AutoThreshold2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

Thresholding node that thresholds via an auto threshold

AutoThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm

AutoThreshold2DAlgorithm(AutoThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm

Copies the algorithm

AutoThreshold2DAlgorithm.SliceThresholdMode - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

AVAILABLE_FONTS - Static variable in class org.hkijena.jipipe.plugins.parameters.library.primitives.FontFamilyParameter

AverageKeyValueThresholdStatisticsGenerator - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics

AverageKeyValueThresholdStatisticsGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator

AverageKeyValueThresholdStatisticsGenerator(AverageKeyValueThresholdStatisticsGenerator) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator

AVICompression - Enum in org.hkijena.jipipe.plugins.imagejdatatypes.util

Wrapper around AVI_Writer compression

awaitToSwing(Future<T>, Consumer<T>) - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewer

Gets a future and passes it into Swing.invokeLater

axes - Variable in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetDescription

Dimension axes.

axesGuessed - Variable in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetDescription

Whether DatasetDescription.axes are read by ImgUtils.parseJsonAxes(java.lang.String) or inferred with ImgUtils.guessAxes(long[]).

axesOf(ImgPlus<?>) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.ImgUtils

Extract axes from ImgPlus.

axisTags - Variable in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetEntryProvider.DatasetEntry

B

b0 - Variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.connections.JIPipeDesktopRectangularLine

b1 - Variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.connections.JIPipeDesktopRectangularLine

backup(JIPipeDesktopProjectWindow) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeBackupApplicationSettings

backupAll() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeBackupApplicationSettings

Band(String, JIPipeDesktopRibbon.Action...) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

Band(String, List<JIPipeDesktopRibbon.Action>) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

Band(String, String, JIPipeDesktopRibbon.Action...) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

Band(String, String, List<JIPipeDesktopRibbon.Action>) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

BarBoxAndWhiskerCategoryJFreeChartPlotData - Class in org.hkijena.jipipe.plugins.plots.datatypes

A box and whisker plot Series table columns: Value (Double), Category (String), Group (String) Multiple series: Yes

BarBoxAndWhiskerCategoryJFreeChartPlotData() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.BarBoxAndWhiskerCategoryJFreeChartPlotData

Creates a new instance

BarBoxAndWhiskerCategoryJFreeChartPlotData(BarBoxAndWhiskerCategoryJFreeChartPlotData) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.BarBoxAndWhiskerCategoryJFreeChartPlotData

Creates a copy

BarCategoryJFreeChartPlotData - Class in org.hkijena.jipipe.plugins.plots.datatypes

A bar category plot Series table columns: Value (Double), Category (String), Group (String) Multiple series: No

BarCategoryJFreeChartPlotData() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.BarCategoryJFreeChartPlotData

Creates a new instance

BarCategoryJFreeChartPlotData(BarCategoryJFreeChartPlotData) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.BarCategoryJFreeChartPlotData

Creates a copy

BarStatisticalCategoryJFreeChartPlotData - Class in org.hkijena.jipipe.plugins.plots.datatypes

A statistical bar category plot Series table columns: Value (Double), Category (String), Group (String) Multiple series: No

BarStatisticalCategoryJFreeChartPlotData() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.BarStatisticalCategoryJFreeChartPlotData

Creates a new instance

BarStatisticalCategoryJFreeChartPlotData(BarStatisticalCategoryJFreeChartPlotData) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.BarStatisticalCategoryJFreeChartPlotData

Creates a copy

base64ToImage(String) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils

base64ToObject(String) - Static method in class org.hkijena.jipipe.utils.SerializationUtils

Deserializes a Java object from its binary representation (as base64 string)

BaseDirectoryChangedEvent(Object, Path) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.BaseDirectoryChangedEvent

BaseDirectoryChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.BaseDirectoryChangedEventEmitter

BatchAssistantPlugin - Class in org.hkijena.jipipe.plugins.batchassistant

BatchAssistantPlugin() - Constructor for class org.hkijena.jipipe.plugins.batchassistant.BatchAssistantPlugin

BatchIndexCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantDataTableUI.BatchIndexCellRenderer

BeforeAddParameterEvent(JIPipeDynamicParameterCollection, JIPipeMutableParameterAccess) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.BeforeAddParameterEvent

BeforeAddParameterEventEmitter() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.BeforeAddParameterEventEmitter

beforeDraw(int, int, int) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin2D

Called before draw is called

beforeDraw(int, int, int) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.LUTManagerPlugin2D

beforeOpenContextMenu(JPopupMenu) - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmSettingsPanelIOEditor

beforeOpenContextMenu(JPopupMenu) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

Executed before opening the context menu Right before adding the partition entries and after all auto-generated items

beforeOpenContextMenu(JPopupMenu) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.JIPipeDesktopCompartmentsGraphEditorUI

beforeOpenContextMenu(JPopupMenu) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.JIPipeDesktopPipelineGraphEditorUI

beforeSetRow() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

Called before the data row is changed

beforeSetRow() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.algorithms.TrackmateLegacyCacheDataViewerWindow

beforeSetRow() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.trackscheme.TrackSchemeLegacyCacheDataViewerWindow

beforeSetRow() - Method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersLegacyDataViewerWindow

beforeSetRow() - Method in class org.hkijena.jipipe.plugins.strings.TextLegacyCacheDataViewerWindow

beforeSetRow() - Method in class org.hkijena.jipipe.plugins.tables.display.TableViewerLegacyCacheDataViewerWindow

beginModificationBlock() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Halts all JIPipeParameterCollection.ParameterStructureChangedEvent until endModificationBlock() is called.

Bernsen(ImageProcessor, int, double, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm

BernsenLocalAutoThreshold2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local

Segmenter node that thresholds via an auto threshold Based on code from fiji.threshold.Auto_Local_Threshold

BernsenLocalAutoThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm

BernsenLocalAutoThreshold2DAlgorithm(BernsenLocalAutoThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm

Copies the algorithm

BilateralFilterAlgorithm - Class in org.hkijena.jipipe.plugins.opencv.nodes.filters

BilateralFilterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.opencv.nodes.filters.BilateralFilterAlgorithm

BilateralFilterAlgorithm(BilateralFilterAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.opencv.nodes.filters.BilateralFilterAlgorithm

BinarizeAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary

BinarizeAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.BinarizeAlgorithm

Instantiates a new node type.

BinarizeAlgorithm(BinarizeAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.BinarizeAlgorithm

Instantiates a new node type.

binaryFileToObject(Path) - Static method in class org.hkijena.jipipe.utils.SerializationUtils

Deserializes a Java object from a binary file via ObjectInputStream

BioFormatsAnnotatorAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate

BioFormats importer wrapper

BioFormatsAnnotatorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm

BioFormatsAnnotatorAlgorithm(BioFormatsAnnotatorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm

BioFormatsAnnotatorAlgorithm.BioFormatsSettings - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate

BioFormatsConfigTool - Class in org.hkijena.jipipe.plugins.imagejdatatypes.tools

BioFormatsConfigTool(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.tools.BioFormatsConfigTool

Creates a new instance

BioFormatsExporter2Algorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io

BioFormatsExporter2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsExporter2Algorithm

BioFormatsExporter2Algorithm(BioFormatsExporter2Algorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsExporter2Algorithm

BioFormatsExporterAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io

Deprecated.

BioFormatsExporterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsExporterAlgorithm

Deprecated.

BioFormatsExporterAlgorithm(BioFormatsExporterAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsExporterAlgorithm

Deprecated.

BioFormatsImporterAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io

BioFormats importer wrapper

BioFormatsImporterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

BioFormatsImporterAlgorithm(BioFormatsImporterAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

Copies the algorithm

BioFormatsSettings() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

BioFormatsSettings(BioFormatsAnnotatorAlgorithm.BioFormatsSettings) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

BitDepth - Enum in org.hkijena.jipipe.plugins.imagejdatatypes.util

Enum of ImageJ bit depths

BitDepthEnumItemInfo - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

BitDepthEnumItemInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.BitDepthEnumItemInfo

bitDepthToImagePlusDataType(int) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Returns the general ImagePlusData class for a bit depth

BitwiseLogicalOperationAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary

BitwiseLogicalOperationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.BitwiseLogicalOperationAlgorithm

BitwiseLogicalOperationAlgorithm(BitwiseLogicalOperationAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.BitwiseLogicalOperationAlgorithm

BLACK_TRANSPARENT - Static variable in class org.hkijena.jipipe.utils.ColorUtils

BlackToWhiteTrackBackground - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

BlackToWhiteTrackBackground() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.BlackToWhiteTrackBackground

blend(ColorProcessor, ColorProcessor, double) - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageBlendMode

Blends the top image onto the bottom image

blend(int, int, double) - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageBlendMode

Applies blending on a single RGB pixel

BlendImagesAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

BlendImagesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.BlendImagesAlgorithm

BlendImagesAlgorithm(BlendImagesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.BlendImagesAlgorithm

Block(long[], int[]) - Constructor for class org.hkijena.jipipe.plugins.ilastik.utils.GridCoordinates.Block

blockSize(long[]) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.Hdf5Utils

BOOKMARK_SHADOW_BORDER - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

BooleanComboBoxItemRenderer(String, String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanDesktopParameterEditorUI.BooleanComboBoxItemRenderer

BooleanDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Parameter editor for boolean data

BooleanDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanDesktopParameterEditorUI

BooleanDesktopParameterEditorUI.BooleanComboBoxItemRenderer - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

BooleanFalseConstant - Class in org.hkijena.jipipe.plugins.expressions.constants

BooleanFalseConstant() - Constructor for class org.hkijena.jipipe.plugins.expressions.constants.BooleanFalseConstant

BooleanFormData - Class in org.hkijena.jipipe.plugins.forms.datatypes

BooleanFormData() - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.BooleanFormData

BooleanFormData(BooleanFormData) - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.BooleanFormData

BooleanFormGeneratorAlgorithm - Class in org.hkijena.jipipe.plugins.forms.algorithms.generators

BooleanFormGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.generators.BooleanFormGeneratorAlgorithm

BooleanFormGeneratorAlgorithm(BooleanFormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.generators.BooleanFormGeneratorAlgorithm

BooleanParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives

BooleanParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.BooleanParameterImageJ2ModuleInput

BooleanParameterImageJ2ModuleOutput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives

BooleanParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.BooleanParameterImageJ2ModuleOutput

BooleanParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.parameters.library.primitives

BooleanParameterTypeInfo - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Info for Boolean

BooleanParameterTypeInfo() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanParameterTypeInfo

BooleanPrimitiveParameterTypeInfo - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Info for Boolean

BooleanPrimitiveParameterTypeInfo() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanPrimitiveParameterTypeInfo

BooleanTrueConstant - Class in org.hkijena.jipipe.plugins.expressions.constants

BooleanTrueConstant() - Constructor for class org.hkijena.jipipe.plugins.expressions.constants.BooleanTrueConstant

BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory

BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory

BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory

BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory

BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory

BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory

BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory

BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory

BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory

BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory

BORDER_COLOR - Static variable in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsNodeTypeCategory

BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory

BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory

BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory

BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory

BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory

BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory

BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory

BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory

BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory

BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory

BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsNodeTypeCategory

BorderImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds

BorderImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.BorderImageJ2OutOfBoundsFactoryData

BorderImageJ2OutOfBoundsFactoryData(OutOfBoundsPeriodicFactory<?, ?>) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.BorderImageJ2OutOfBoundsFactoryData

BorderImageJ2OutOfBoundsFactoryData(BorderImageJ2OutOfBoundsFactoryData) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.BorderImageJ2OutOfBoundsFactoryData

BorderMode - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

borderNorthCenter(JComponent, JComponent) - Static method in class org.hkijena.jipipe.utils.UIUtils

borderNorthSouth(JComponent, JComponent) - Static method in class org.hkijena.jipipe.utils.UIUtils

BoxAndWhiskerCategoryJFreeChartPlotData - Class in org.hkijena.jipipe.plugins.plots.datatypes

Contains data for box and whisker category plots category plots.

BoxAndWhiskerCategoryJFreeChartPlotData() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.BoxAndWhiskerCategoryJFreeChartPlotData

Creates a new instance

BoxAndWhiskerCategoryJFreeChartPlotData(BoxAndWhiskerCategoryJFreeChartPlotData) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.BoxAndWhiskerCategoryJFreeChartPlotData

Creates a copy

BoxFilter2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur

Wrapper around ImageProcessor

BoxFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.BoxFilter2DAlgorithm

Instantiates a new node type.

BoxFilter2DAlgorithm(BoxFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.BoxFilter2DAlgorithm

Instantiates a new node type.

BoxFilter3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur

Wrapper around GaussianBlur

BoxFilter3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm

Instantiates a new node type.

BoxFilter3DAlgorithm(BoxFilter3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm

Instantiates a new node type.

boxHorizontal(Component...) - Static method in class org.hkijena.jipipe.utils.UIUtils

boxVertical(Component...) - Static method in class org.hkijena.jipipe.utils.UIUtils

branch(String) - Method in interface org.hkijena.jipipe.api.data.context.JIPipeDataContext

Returns a new context that contains the current one as predecessor

branch(JIPipeGraphNode) - Method in interface org.hkijena.jipipe.api.data.context.JIPipeDataContext

Returns a new context that contains the current one as predecessor

BRANCHES_TABLE_OUTPUT_SLOT - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm

BrightSpotsSegmentation2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

Applies Bright spots segmentation

BrightSpotsSegmentation2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm

BrightSpotsSegmentation2DAlgorithm(BrightSpotsSegmentation2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm

Copies the algorithm

browse(int) - Method in interface org.hkijena.jipipe.api.data.browser.JIPipeDataTableBrowser

Creates a data browser

browse(int, String) - Method in interface org.hkijena.jipipe.api.data.browser.JIPipeDataTableBrowser

Creates a data browser (optionally supports a data annotation column)

browse(int, String) - Method in class org.hkijena.jipipe.api.data.browser.JIPipeLocalDataTableBrowser

browseData(JIPipeDataBrowser, String) - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow

browseDataTable(JIPipeLocalDataTableBrowser, int, String, String) - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow

BufferedImageUtils - Class in org.hkijena.jipipe.utils

BufferedImageUtils() - Constructor for class org.hkijena.jipipe.utils.BufferedImageUtils

build() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder

build() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

build(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

build() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

Returns the finished object Requires following properties to be set: source, field class, getter, setter

build() - Method in class org.hkijena.jipipe.plugins.imp.utils.ImpImageDataBuilder

build() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.RowBuilder

Does nothing

buildCustomPanel() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

buildCustomPanel() - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

buildCustomPanel() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

buildCustomPanel() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

buildCustomPanel() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

buildCustomPanel() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

buildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

buildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

buildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

buildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

buildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

buildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

buildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

buildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.CalibrationPlugin2D

buildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.CompositeManagerPlugin2D

buildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.LUTManagerPlugin2D

buildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawer2DTool

buildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

buildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.PixelInfoPlugin2D

buildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

builder() - Static method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer

Builder() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder

builder() - Static method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

builder() - Static method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess

Creates a new builder

Builder() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

buildFor(Path, JIPipeExpressionVariablesMap) - Static method in class org.hkijena.jipipe.plugins.expressions.variables.PathFilterExpressionParameterVariablesInfo

buildPanel(JIPipeDesktopFormPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

buildPanel(JIPipeDesktopFormPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.CalibrationPlugin2D

buildPanel(JIPipeDesktopFormPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.CompositeManagerPlugin2D

buildPanel(JIPipeDesktopFormPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.LUTManagerPlugin2D

buildPanel(JIPipeDesktopFormPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.EllipseMaskDrawer2DTool

buildPanel(JIPipeDesktopFormPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

buildPanel(JIPipeDesktopFormPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskToROIDrawerPlugin2D

buildPanel(JIPipeDesktopFormPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MeasurementDrawerPlugin2D

buildPanel(JIPipeDesktopFormPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PencilMaskDrawer2DTool

buildPanel(JIPipeDesktopFormPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PolygonMaskDrawer2DTool

buildPanel(JIPipeDesktopFormPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.RectangleMaskDrawer2DTool

buildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableUI

buildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

buildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

buildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

buildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

buildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

buildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

buildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

buildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.CalibrationPlugin2D

buildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.CompositeManagerPlugin2D

buildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.LUTManagerPlugin2D

buildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawer2DTool

buildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

buildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MeasurementDrawerPlugin2D

buildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.PixelInfoPlugin2D

buildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

buildSeries() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotSeriesEditor

Generates a series

buildStatusBar(JToolBar) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

buildStatusBar(JToolBar) - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

buildStatusBar(JToolBar) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

buildStatusBar(JToolBar) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

buildStatusBar(JToolBar) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

buildStatusBar(JToolBar) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

buildStatusBar(JToolBar) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

buildStatusBar(JToolBar) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.CalibrationPlugin2D

buildStatusBar(JToolBar) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.CompositeManagerPlugin2D

buildStatusBar(JToolBar) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.LUTManagerPlugin2D

buildStatusBar(JToolBar) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawer2DTool

buildStatusBar(JToolBar) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

buildStatusBar(JToolBar) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.PixelInfoPlugin2D

buildStatusBar(JToolBar) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

buildTokens(List<String>) - Static method in class org.hkijena.jipipe.api.nodes.database.JIPipeLegacyNodeDatabaseSearch

Converts a list of texts into word tokens

buildVariablesSet(ImagePlus, JIPipeExpressionVariablesMap) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.ImageQueryExpressionVariablesInfo

Builds the proper variable set for an image

BUnwarpJMaxScaleDeformation - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.bunwarpj

BUnwarpJMinScaleDeformation - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.bunwarpj

BUnwarpJMode - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.bunwarpj

BusyCursor - Class in org.hkijena.jipipe.utils.ui

A cursor for a component to indicate that some process is running

BusyCursor(Component) - Constructor for class org.hkijena.jipipe.utils.ui.BusyCursor

ByteArrayParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays

ByteArrayParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.ByteArrayParameterImageJ2ModuleInput

ByteConstantValueImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant

ByteConstantValueImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.ByteConstantValueImageJ2OutOfBoundsFactoryData

ByteConstantValueImageJ2OutOfBoundsFactoryData(OutOfBoundsConstantValueFactory<?, ?>) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.ByteConstantValueImageJ2OutOfBoundsFactoryData

ByteConstantValueImageJ2OutOfBoundsFactoryData(ByteConstantValueImageJ2OutOfBoundsFactoryData) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.ByteConstantValueImageJ2OutOfBoundsFactoryData

ByteParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives

ByteParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.ByteParameterImageJ2ModuleInput

ByteParameterImageJ2ModuleOutput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives

ByteParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.ByteParameterImageJ2ModuleOutput

ByteParameterTypeInfo - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Info for Byte

ByteParameterTypeInfo() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.ByteParameterTypeInfo

BytePrimitiveParameterTypeInfo - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Info for Byte

BytePrimitiveParameterTypeInfo() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.BytePrimitiveParameterTypeInfo

C

CacheAwareOpenResultsTableInJIPipeDataDisplayOperation - Class in org.hkijena.jipipe.plugins.tables.display

CacheAwareOpenResultsTableInJIPipeDataDisplayOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.display.CacheAwareOpenResultsTableInJIPipeDataDisplayOperation

calculateAdditionalMeasurements(ImageStatisticsSetParameter, boolean, Roi, ResultsTableData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.ImageMeasurementUtils

calculateCalibration(ImageProcessor, ImageJCalibrationMode, double, double, ImageStatistics) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

calculateCenter(List<IndexedDoublePoint>) - Static method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.IndexedDoublePoint

calculateConcaveHull(List<Point2D>, int) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ConcaveHullMoreiraSantos

calculateMaxTabHeight(int) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

calculateMinimumBoundingRectangle(Roi) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Method based on fitMinRectangle

calculateThreshold(int[]) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdFunction

calculateThreshold(int[]) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdHuang

calculateThreshold(int[]) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdImageJDefault

calculateThreshold(int[]) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdImageJIsoData

calculateThreshold(int[]) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdIntermodes

calculateThreshold(int[]) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdIsoData

calculateThreshold(int[]) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdLi

calculateThreshold(int[]) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdMaxEntropy

calculateThreshold(int[]) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdMean

calculateThreshold(int[]) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdMinError

calculateThreshold(int[]) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdMinimum

calculateThreshold(int[]) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdMoments

calculateThreshold(int[]) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdOtsu

calculateThreshold(int[]) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdPercentile

calculateThreshold(int[]) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdRenyi

calculateThreshold(int[]) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdShanbhag

calculateThreshold(int[]) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdTriangle

calculateThreshold(int[]) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdYen

calibrate(ImageProcessor, ImageJCalibrationMode, double, double, ImageStatistics) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

calibrate(ImagePlus, ImageJCalibrationMode, double, double) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Calibrates the image (all processors).

calibrateAxis(ValueAxis, OptionalDoubleParameter, OptionalDoubleParameter) - Static method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

Calibrates the axes of a plot, setting min and max values

CalibrationParameters - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

CalibrationParameters() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.CalibrationParameters

CalibrationParameters(CalibrationParameters) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.CalibrationParameters

CalibrationPlugin2D - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d

CalibrationPlugin2D(JIPipeDesktopLegacyImageViewer) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.CalibrationPlugin2D

call(JIPipeCache.ClearedEventListener, JIPipeCache.ClearedEvent) - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.ClearedEventEmitter

call(JIPipeCache.ModifiedEventListener, JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.ModifiedEventEmitter

call(JIPipeCache.StoredEventListener, JIPipeCache.StoredEvent) - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.StoredEventEmitter

call(JIPipeDataBrowser.UpdatedEventListener, JIPipeDataBrowser.UpdatedEvent) - Method in class org.hkijena.jipipe.api.data.browser.JIPipeDataBrowser.UpdatedEventEmitter

call(JIPipeDataTableBrowser.UpdatedEventListener, JIPipeDataTableBrowser.UpdatedEvent) - Method in class org.hkijena.jipipe.api.data.browser.JIPipeDataTableBrowser.UpdatedEventEmitter

call(JIPipeSlotConfiguration.SlotConfigurationChangedEventListener, JIPipeSlotConfiguration.SlotConfigurationChangedEvent) - Method in class org.hkijena.jipipe.api.data.JIPipeSlotConfiguration.SlotConfigurationChangedEventEmitter

call(JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEventListener, JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEvent) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEventEmitter

call(Listener, Event) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter

call(JIPipeEventEmitter<Event, Listener>, Event) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter.LambdaSubscriber

call(JIPipeEventEmitter<Event, Listener>, Event) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter.StrongObjectSubscriber

call(JIPipeEventEmitter<Event, Listener>, Event) - Method in interface org.hkijena.jipipe.api.events.JIPipeEventEmitter.Subscriber

call(JIPipeEventEmitter<Event, Listener>, Event) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter.WeakObjectSubscriber

call(ParameterReferencesChangedEventListener, ParameterReferencesChangedEvent) - Method in class org.hkijena.jipipe.api.grouping.events.ParameterReferencesChangedEventEmitter

call(JIPipeHistoryJournal.HistoryChangedEventListener, JIPipeHistoryJournal.HistoryChangedEvent) - Method in class org.hkijena.jipipe.api.history.JIPipeHistoryJournal.HistoryChangedEventEmitter

call(JIPipeProgressInfo.StatusUpdatedEventListener, JIPipeProgressInfo.StatusUpdatedEvent) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo.StatusUpdatedEventEmitter

call(JIPipeGraph.GraphChangedEventListener, JIPipeGraph.GraphChangedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.GraphChangedEventEmitter

call(JIPipeGraph.NodeAddedEventListener, JIPipeGraph.NodeAddedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeAddedEventEmitter

call(JIPipeGraph.NodeConnectedEventListener, JIPipeGraph.NodeConnectedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeConnectedEventEmitter

call(JIPipeGraph.NodeDisconnectedEventListener, JIPipeGraph.NodeDisconnectedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeDisconnectedEventEmitter

call(JIPipeGraph.NodeRemovedEventListener, JIPipeGraph.NodeRemovedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeRemovedEventEmitter

call(JIPipeGraphNode.BaseDirectoryChangedEventListener, JIPipeGraphNode.BaseDirectoryChangedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.BaseDirectoryChangedEventEmitter

call(JIPipeGraphNode.NodeSlotsChangedEventListener, JIPipeGraphNode.NodeSlotsChangedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.NodeSlotsChangedEventEmitter

call(JIPipeNotificationInbox.DismissedEventListener, JIPipeNotificationInbox.DismissedEvent) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.DismissedEventEmitter

call(JIPipeNotificationInbox.PushedEventListener, JIPipeNotificationInbox.PushedEvent) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.PushedEventEmitter

call(JIPipeNotificationInbox.UpdatedEventListener, JIPipeNotificationInbox.UpdatedEvent) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.UpdatedEventEmitter

call(JIPipeDynamicParameterCollection.BeforeAddParameterEventListener, JIPipeDynamicParameterCollection.BeforeAddParameterEvent) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.BeforeAddParameterEventEmitter

call(JIPipeParameterCollection.ParameterChangedEventListener, JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterChangedEventEmitter

call(JIPipeParameterCollection.ParameterStructureChangedEventListener, JIPipeParameterCollection.ParameterStructureChangedEvent) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterStructureChangedEventEmitter

call(JIPipeParameterCollection.ParameterUIChangedEventListener, JIPipeParameterCollection.ParameterUIChangedEvent) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterUIChangedEventEmitter

call(JIPipeProject.CompartmentAddedEventListener, JIPipeProject.CompartmentAddedEvent) - Method in class org.hkijena.jipipe.api.project.JIPipeProject.CompartmentAddedEventEmitter

call(JIPipeProject.CompartmentRemovedEventListener, JIPipeProject.CompartmentRemovedEvent) - Method in class org.hkijena.jipipe.api.project.JIPipeProject.CompartmentRemovedEventEmitter

call(JIPipeProjectRunSetsConfiguration.RunSetsModifiedEventListener, JIPipeProjectRunSetsConfiguration.RunSetsModifiedEvent) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectRunSetsConfiguration.RunSetsModifiedEventEmitter

call(JIPipeApplicationSettingsRegistry.ChangedEventListener, JIPipeApplicationSettingsRegistry.ChangedEvent) - Method in class org.hkijena.jipipe.api.registries.JIPipeApplicationSettingsRegistry.ChangedEventEmitter

call(JIPipeArtifactsRegistry.UpdatedEventListener, JIPipeArtifactsRegistry.UpdatedEvent) - Method in class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry.UpdatedEventEmitter

call(JIPipePluginRegistry.ScheduledActivatePluginEventListener, JIPipePluginRegistry.ScheduledActivatePluginEvent) - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry.ScheduledActivatePluginEventEmitter

call(JIPipePluginRegistry.ScheduledDeactivatePluginEventListener, JIPipePluginRegistry.ScheduledDeactivatePluginEvent) - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry.ScheduledDeactivatePluginEventEmitter

call(JIPipeProjectTemplateRegistry.TemplatesUpdatedEventListener, JIPipeProjectTemplateRegistry.TemplatesUpdatedEvent) - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry.TemplatesUpdatedEventEmitter

call(JIPipeRecentProjectsRegistry.ChangedEventListener, JIPipeRecentProjectsRegistry.ChangedEvent) - Method in class org.hkijena.jipipe.api.registries.JIPipeRecentProjectsRegistry.ChangedEventEmitter

call(JIPipeGraphRunGCGraph.GCEventListener, JIPipeGraphRunGCGraph.GCEvent) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph.GCEventEmitter

call(JIPipeRunnable.EnqeuedEventListener, JIPipeRunnable.EnqueuedEvent) - Method in class org.hkijena.jipipe.api.run.JIPipeRunnable.EnqueuedEventEmitter

call(JIPipeRunnable.FinishedEventListener, JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.api.run.JIPipeRunnable.FinishedEventEmitter

call(JIPipeRunnable.InterruptedEventListener, JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.api.run.JIPipeRunnable.InterruptedEventEmitter

call(JIPipeRunnable.ProgressEventListener, JIPipeRunnable.ProgressEvent) - Method in class org.hkijena.jipipe.api.run.JIPipeRunnable.ProgressEventEmitter

call(JIPipeRunnable.StartedEventListener, JIPipeRunnable.StartedEvent) - Method in class org.hkijena.jipipe.api.run.JIPipeRunnable.StartedEventEmitter

call(JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEventListener, JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEventEmitter

call(JIPipeDesktopRecentProjectsListPanel.ProjectOpenedEventListener, JIPipeDesktopRecentProjectsListPanel.ProjectOpenedEvent) - Method in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopRecentProjectsListPanel.ProjectOpenedEventEmitter

call(JIPipeDesktopGraphCanvasUI.GraphCanvasUpdatedEventListener, JIPipeDesktopGraphCanvasUI.GraphCanvasUpdatedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.GraphCanvasUpdatedEventEmitter

call(JIPipeDesktopGraphCanvasUI.NodeSelectionChangedEventListener, JIPipeDesktopGraphCanvasUI.NodeSelectionChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.NodeSelectionChangedEventEmitter

call(JIPipeDesktopGraphCanvasUI.NodeUISelectedEventListener, JIPipeDesktopGraphCanvasUI.NodeUISelectedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.NodeUISelectedEventEmitter

call(JIPipeDesktopGraphNodeUI.DefaultNodeUIActionRequestedEventListener, JIPipeDesktopGraphNodeUI.DefaultNodeUIActionRequestedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI.DefaultNodeUIActionRequestedEventEmitter

call(JIPipeDesktopGraphNodeUI.NodeUIActionRequestedEventListener, JIPipeDesktopGraphNodeUI.NodeUIActionRequestedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI.NodeUIActionRequestedEventEmitter

call(JIPipeDesktopRunnableLogsCollection.LogClearedEventListener, JIPipeDesktopRunnableLogsCollection.LogClearedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection.LogClearedEventEmitter

call(JIPipeDesktopRunnableLogsCollection.LogEntryAddedEventListener, JIPipeDesktopRunnableLogsCollection.LogEntryAddedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection.LogEntryAddedEventEmitter

call(JIPipeDesktopRunnableLogsCollection.LogUpdatedEventListener, JIPipeDesktopRunnableLogsCollection.LogUpdatedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection.LogUpdatedEventEmitter

call(JIPipeDesktopColorChooserButton.ColorChosenEventListener, JIPipeDesktopColorChooserButton.ColorChosenEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopColorChooserButton.ColorChosenEventEmitter

call(JIPipeDesktopFormPanel.ContextHelpEventListener, JIPipeDesktopFormPanel.ContextHelpEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.ContextHelpEventEmitter

call(JIPipeDesktopZoomViewPort.ZoomChangedEventListener, JIPipeDesktopZoomViewPort.ZoomChangedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopZoomViewPort.ZoomChangedEventEmitter

call(JIPipeDesktopDataTypePicker.DataTypeDeselectedEventListener, JIPipeDesktopDataTypePicker.DataTypeDeselectedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.DataTypeDeselectedEventEmitter

call(JIPipeDesktopDataTypePicker.DataTypeSelectedEventListener, JIPipeDesktopDataTypePicker.DataTypeSelectedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.DataTypeSelectedEventEmitter

call(JIPipeDesktopDataTypePicker.SelectedDataTypesChangedEventListener, JIPipeDesktopDataTypePicker.SelectedDataTypesChangedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.SelectedDataTypesChangedEventEmitter

call(JIPipeDesktopNodeInfoPicker.NodeInfoDeselectedEventListener, JIPipeDesktopNodeInfoPicker.NodeInfoDeselectedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.NodeInfoDeselectedEventEmitter

call(JIPipeDesktopNodeInfoPicker.NodeInfoSelectedEventListener, JIPipeDesktopNodeInfoPicker.NodeInfoSelectedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.NodeInfoSelectedEventEmitter

call(JIPipeDesktopNodeInfoPicker.SelectedInfosChangedEventListener, JIPipeDesktopNodeInfoPicker.SelectedInfosChangedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.SelectedInfosChangedEventEmitter

call(JIPipeDesktopTabPane.TabRenamedEventListener, JIPipeDesktopTabPane.TabRenamedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.TabRenamedEventEmitter

call(WindowClosedEventListener, WindowClosedEvent) - Method in class org.hkijena.jipipe.desktop.commons.events.WindowClosedEventEmitter

call(WindowOpenedEventListener, WindowOpenedEvent) - Method in class org.hkijena.jipipe.desktop.commons.events.WindowOpenedEventEmitter

call(JIPipeService.DatatypeRegisteredEventListener, JIPipeService.DatatypeRegisteredEvent) - Method in class org.hkijena.jipipe.JIPipeService.DatatypeRegisteredEventEmitter

call(JIPipeService.PluginContentAddedEventListener, JIPipeService.ExtensionContentAddedEvent) - Method in class org.hkijena.jipipe.JIPipeService.ExtensionContentAddedEventEmitter

call(JIPipeService.PluginContentRemovedEventListener, JIPipeService.ExtensionContentRemovedEvent) - Method in class org.hkijena.jipipe.JIPipeService.ExtensionContentRemovedEventEmitter

call(JIPipeService.PluginDiscoveredEventListener, JIPipeService.ExtensionDiscoveredEvent) - Method in class org.hkijena.jipipe.JIPipeService.ExtensionDiscoveredEventEmitter

call(JIPipeService.PluginRegisteredEventListener, JIPipeService.ExtensionRegisteredEvent) - Method in class org.hkijena.jipipe.JIPipeService.ExtensionRegisteredEventEmitter

call(JIPipeService.NodeInfoRegisteredEventListener, JIPipeService.NodeInfoRegisteredEvent) - Method in class org.hkijena.jipipe.JIPipeService.NodeInfoRegisteredEventEmitter

call(MaskDrawerPlugin2D.MaskChangedEventListener, MaskDrawerPlugin2D.MaskChangedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D.MaskChangedEventEmitter

call(ImageViewerPanelCanvas2D.PixelHoverEventListener, ImageViewerPanelCanvas2D.PixelHoverEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.PixelHoverEventEmitter

call(ImageViewerPanelCanvas2D.ToolChangedEventListener, ImageViewerPanelCanvas2D.ToolChangedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.ToolChangedEventEmitter

call(NodeTemplatesRefreshedEventListener, NodeTemplatesRefreshedEvent) - Method in class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplatesRefreshedEventEmitter

call(ParameterTable.ModelChangedEventListener, ParameterTable.ModelChangedEvent) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ModelChangedEventEmitter

call(CustomStateLessToggleButton.ToggledEventListener, CustomStateLessToggleButton.ToggledEvent) - Method in class org.hkijena.jipipe.utils.CustomStateLessToggleButton.ToggledEventEmitter

call(JIPipeDesktopSplitPane.RatioUpdatedEventListener, JIPipeDesktopSplitPane.RatioUpdatedEvent) - Method in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.RatioUpdatedEventEmitter

call(ProcessUtils.RunCancellationWatchdog.CancelledEventListener, ProcessUtils.RunCancellationWatchdog.CancelledEvent) - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog.CancelledEventEmitter

call(MouseClickedEventListener, MouseClickedEvent) - Method in class org.hkijena.jipipe.utils.ui.events.MouseClickedEventEmitter

call(MouseDraggedEventListener, MouseDraggedEvent) - Method in class org.hkijena.jipipe.utils.ui.events.MouseDraggedEventEmitter

call(MouseEnteredEventListener, MouseEnteredEvent) - Method in class org.hkijena.jipipe.utils.ui.events.MouseEnteredEventEmitter

call(MouseExitedEventListener, MouseExitedEvent) - Method in class org.hkijena.jipipe.utils.ui.events.MouseExitedEventEmitter

call(MouseMovedEventListener, MouseMovedEvent) - Method in class org.hkijena.jipipe.utils.ui.events.MouseMovedEventEmitter

call(MousePressedEventListener, MousePressedEvent) - Method in class org.hkijena.jipipe.utils.ui.events.MousePressedEventEmitter

call(MouseReleasedEventListener, MouseReleasedEvent) - Method in class org.hkijena.jipipe.utils.ui.events.MouseReleasedEventEmitter

call(JIPipeDesktopDockPanel.PanelSideVisibilityChangedEventListener, JIPipeDesktopDockPanel.PanelSideVisibilityChangedEvent) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.PanelSideVisibilityChangedEventEmitter

call(JIPipeDesktopDockPanel.StateSavedEventListener, JIPipeDesktopDockPanel.StateSavedEvent) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.StateSavedEventEmitter

canActivate(JIPipeValidationReport, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.JIPipePlugin

Returns true if the extension can be activated.

canActivate(JIPipeValidationReport, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.OMEROPlugin

canAddInputSlot() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

canAddInputSlot() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

canAddInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewCompartmentNodeDatabaseEntry

canAddInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

canAddInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

canAddInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

canAddInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

canAddInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

canAddInputSlots() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry

canAddOrDeleteNodes(JIPipeWorkbench) - Static method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

canAddOutputSlot() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

canAddOutputSlot() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

canAddOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewCompartmentNodeDatabaseEntry

canAddOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

canAddOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

canAddOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

canAddOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

canAddOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

canAddOutputSlots() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry

canAutoPassThrough() - Method in class org.hkijena.jipipe.api.compartments.algorithms.IOInterfaceAlgorithm

canAutoPassThrough() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

Returns true if the algorithm can automatically apply pass-through This is only possible if there is at most one input and at most one output.

cancel(String) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

cancel() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

cancel(JIPipeRunnable) - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

Cancels a runnable

cancel(boolean) - Method in class org.hkijena.jipipe.utils.InstantFuture

cancelAll() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

cancelIf(Predicate<JIPipeRunnable>) - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

CancelledEvent(ProcessUtils.RunCancellationWatchdog) - Constructor for class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog.CancelledEvent

CancelledEventEmitter() - Constructor for class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog.CancelledEventEmitter

canClose() - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore

Returns true if the data has no users and thus can be closed

canConnect(JIPipeDataSlot, JIPipeDataSlot, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Slow implementation of connection checking that tests for graph cycles

canConnectFast(JIPipeDataSlot, JIPipeDataSlot, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Fast implementation of connection checking without copying the graph

canCreateCompatibleInputSlot(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Returns if an input slot with specified type can be created

canCreateCompatibleInputSlot(Class<? extends JIPipeData>) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

canCreateCompatibleOutputSlot(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Returns if an output slot with specified type can be created

canCreateCompatibleOutputSlot(Class<? extends JIPipeData>) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

canExtract() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory

canExtract() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory

Returns if the node can be extracted (copied) from the graph

canGoBack() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.FileChooserHistory

Checks if back navigation is possible.

canGoForward() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.FileChooserHistory

Checks if forward navigation is possible.

canModifyInputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

canModifyInputSlots() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

canModifyOutputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

canModifyOutputSlots() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

canModifySlots(JIPipeWorkbench) - Static method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

canNavigate(JIPipeWorkbench) - Method in class org.hkijena.jipipe.api.validation.contexts.GraphNodeValidationReportContext

canNavigate(JIPipeWorkbench) - Method in class org.hkijena.jipipe.api.validation.NavigableJIPipeValidationReportContext

CannyEdgeDetectorAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge

This is the JIPipe version of the ImageJ plugin ...

CannyEdgeDetectorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm

Instantiates a new node type.

CannyEdgeDetectorAlgorithm(CannyEdgeDetectorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm

canPassThrough() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

Returns true if the algorithm can apply pass-through.

canPassThrough() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithAnnotationTable

canPassThrough() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.MergeAnnotations

canPassThrough() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter

canPassThrough() - Method in class org.hkijena.jipipe.plugins.forms.algorithms.FormGeneratorAlgorithm

canPassThrough() - Method in class org.hkijena.jipipe.plugins.forms.algorithms.IteratingFormProcessorAlgorithm

canPassThrough() - Method in class org.hkijena.jipipe.plugins.forms.algorithms.MergingFormProcessorAlgorithm

canPassThrough() - Method in class org.hkijena.jipipe.plugins.forms.algorithms.SimpleIteratingFormProcessorAlgorithm

canPassThrough() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.overlay.RenderOverlay3DAlgorithm

canPassThrough() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawMaskAlgorithm

canPassThrough() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawROIAlgorithm

canPassThrough() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

canPassThrough() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

canPassThrough() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.CountROIAlgorithm

canPassThrough() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.ExtractParametersAlgorithm

canPassThrough() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.ExtractTableAlgorithm

canRegister() - Method in class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask

canRegister() - Method in interface org.hkijena.jipipe.api.registries.JIPipeNodeRegistrationTask

Returns true if the registration can be done This function should fail as fast as possible

canRegister() - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionRegistrationTask

canRemoveInputSlot(String, boolean) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

canRemoveOutputSlot(String, boolean) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

canRenderEdge(JIPipeDataSlot, JIPipeDataSlot, JIPipeGraphEdge) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

canRenderEdge(JIPipeDataSlot, JIPipeDataSlot, JIPipeGraphEdge) - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeToggleableGraphEditorTool

canResolveAllNodes(JIPipeProject) - Method in class org.hkijena.jipipe.api.run.JIPipeProjectRunSet

canShow(JIPipeDataSlot, JIPipeDataTableRowInfo, Path) - Method in interface org.hkijena.jipipe.api.data.JIPipeLegacyDataImportOperation

Checks if the import is possible

canShowNotification(JIPipeRunnableWorker) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueNotifier

canUserDelete(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns true if the user can delete the algorithm

canUserDelete() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns true if a user can delete this algorithm

canUserDisconnect(JIPipeDataSlot, JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns true if the user can disconnect the slots

CanvasEqualizer - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

CanvasEqualizer() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.CanvasEqualizer

CanvasEqualizer(CanvasEqualizer) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.CanvasEqualizer

CanvasParameters() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.CanvasParameters

CanvasParameters(MontageCreator.CanvasParameters) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.CanvasParameters

CaseFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.control

CaseFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.control.CaseFunction

CATEGORY_3D - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_ANALYSIS - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_ANNOTATION - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_AUTOMATION - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_BENCHMARK - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_BINARY - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_CELLPROFILER - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_CLASSIFICATION - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_COLOCALIZATION - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_COLOR_PROCESSING - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_COMPLEXITY - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_COOKBOOK - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_DATA_PROCESSING - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_DECONVOLUTION - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_DEEP_LEARNING - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_DENOISING - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_DEVELOPMENT - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_DIGITAL_VOLUME_FLATTENING - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_DIGITAL_VOLUME_UNROLLING - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_ENTROPY - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_EXAMPLE_DATA - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_FEATURE_EXTRACTION - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_FIJI - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_FILTERING - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_FRACTAL_DIMENSION - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_GPU - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_GUT - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_HELP - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_IMAGE_ANALYSIS - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_IMAGE_ANNOTATION - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_IMAGE_SCIENCE - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_IMAGEJ2 - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_IMGLIB - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_IMPORT_EXPORT - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_INTEGRAL_IMAGE - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_INTERACTIVE - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_LIFETIME - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_LISP - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_MACHINE_LEARNING - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_MATHEMATICAL_MORPHOLOGY - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_MATLAB - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_MICROSCOPY - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_MICROTUBULES - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_MONTAGE - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_NEUROANATOMY - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_NEURON - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_NOISE - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_OBJECT_DETECTION - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_OME - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_OPS - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_OPTIC_FLOW - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_PARTICLE_ANALYSIS - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_PATTERN_RECOGNITION - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_PERFUSION - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_PHOTOGRAMMETRY - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_PHOTOGRAPHY - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_PLOTTING - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_PROJECTION - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_REGISTRATION - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_SCIJAVA - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_SCRIPTING - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_SEGMENTATION - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_SKELETON - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_SKELETONIZATION - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_STACKS - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_STATISTICS - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_STITCHING - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_SUPER_RESOLUTION - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_TIME_SIGNAL_ANALYSIS - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_TISSUE - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_TRACKEM2 - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_TRACKING - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_TRANSFORM - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_TUTORIAL - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_TUTORIALS - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_UNCATEGORIZED - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_USER_INTERFACE - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CATEGORY_VISUALIZATION - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

CategoryJFreeChartPlotData - Class in org.hkijena.jipipe.plugins.plots.datatypes

Contains data for category plots.

CategoryJFreeChartPlotData() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.CategoryJFreeChartPlotData

Creates a new instance

CategoryJFreeChartPlotData(CategoryJFreeChartPlotData) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.CategoryJFreeChartPlotData

Creates a copy

CeilingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a floor function

CeilingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.CeilingColumnOperation

CELL_HEIGHT - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.nodefinder.JIPipeDesktopNodeFinderDatasetListCellRenderer

Cellpose1InferenceAlgorithm - Class in org.hkijena.jipipe.plugins.cellpose.legacy.algorithms

Deprecated.

New implementation will be CellposeAlgorithm2 that is based around the Cellpose CLI

Cellpose1InferenceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

Cellpose1InferenceAlgorithm(Cellpose1InferenceAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

Cellpose1TrainingAlgorithm - Class in org.hkijena.jipipe.plugins.cellpose.legacy.algorithms

Deprecated.

Cellpose1TrainingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

Cellpose1TrainingAlgorithm(Cellpose1TrainingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

Cellpose2ChannelSettings - Class in org.hkijena.jipipe.plugins.cellpose.parameters.cp2

Cellpose2ChannelSettings() - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2ChannelSettings

Cellpose2ChannelSettings(Cellpose2ChannelSettings) - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2ChannelSettings

Cellpose2EnvironmentAccessNode - Interface in org.hkijena.jipipe.plugins.cellpose.algorithms.cp2

Interface that should be used by nodes that access the OMERO credentials environments

Cellpose2GPUSettings - Class in org.hkijena.jipipe.plugins.cellpose.parameters.cp2

Cellpose2GPUSettings() - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2GPUSettings

Cellpose2GPUSettings(Cellpose2GPUSettings) - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2GPUSettings

Cellpose2PluginApplicationSettings - Class in org.hkijena.jipipe.plugins.cellpose

Cellpose2PluginApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.cellpose.Cellpose2PluginApplicationSettings

Cellpose2SegmentationInferenceAlgorithm - Class in org.hkijena.jipipe.plugins.cellpose.algorithms.cp2

Cellpose2SegmentationInferenceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

Cellpose2SegmentationInferenceAlgorithm(Cellpose2SegmentationInferenceAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

Cellpose2SegmentationOutputSettings - Class in org.hkijena.jipipe.plugins.cellpose.parameters.cp2

Cellpose2SegmentationOutputSettings() - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationOutputSettings

Cellpose2SegmentationOutputSettings(Cellpose2SegmentationOutputSettings) - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationOutputSettings

Cellpose2SegmentationThresholdSettings - Class in org.hkijena.jipipe.plugins.cellpose.parameters.cp2

Cellpose2SegmentationThresholdSettings() - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationThresholdSettings

Cellpose2SegmentationThresholdSettings(Cellpose2SegmentationThresholdSettings) - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationThresholdSettings

Cellpose2SegmentationTweaksSettings - Class in org.hkijena.jipipe.plugins.cellpose.parameters.cp2

Cellpose2SegmentationTweaksSettings() - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationTweaksSettings

Cellpose2SegmentationTweaksSettings(Cellpose2SegmentationTweaksSettings) - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationTweaksSettings

Cellpose2TrainingAlgorithm - Class in org.hkijena.jipipe.plugins.cellpose.algorithms.cp2

Cellpose2TrainingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

Cellpose2TrainingAlgorithm(Cellpose2TrainingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

Cellpose2TrainingTweaksSettings - Class in org.hkijena.jipipe.plugins.cellpose.parameters.cp2

Cellpose2TrainingTweaksSettings() - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2TrainingTweaksSettings

Cellpose2TrainingTweaksSettings(Cellpose2TrainingTweaksSettings) - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2TrainingTweaksSettings

Cellpose3DenoiseInferenceAlgorithm - Class in org.hkijena.jipipe.plugins.cellpose.algorithms.cp3

Cellpose3DenoiseInferenceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

Cellpose3DenoiseInferenceAlgorithm(Cellpose3DenoiseInferenceAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

Cellpose3DenoiseTrainingAlgorithm - Class in org.hkijena.jipipe.plugins.cellpose.algorithms.cp3

Cellpose3DenoiseTrainingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

Cellpose3DenoiseTrainingAlgorithm(Cellpose3DenoiseTrainingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

Cellpose3DenoiseTrainingNoiseSettings - Class in org.hkijena.jipipe.plugins.cellpose.parameters.cp3

Cellpose3DenoiseTrainingNoiseSettings() - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseSettings

Cellpose3DenoiseTrainingNoiseSettings(Cellpose3DenoiseTrainingNoiseSettings) - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseSettings

Cellpose3DenoiseTrainingNoiseType - Enum in org.hkijena.jipipe.plugins.cellpose.parameters.cp3

Cellpose3DenoiseTrainingTweaksSettings - Class in org.hkijena.jipipe.plugins.cellpose.parameters.cp3

Cellpose3DenoiseTrainingTweaksSettings() - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

Cellpose3DenoiseTrainingTweaksSettings(Cellpose3DenoiseTrainingTweaksSettings) - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

Cellpose3EnvironmentAccessNode - Interface in org.hkijena.jipipe.plugins.cellpose.algorithms.cp3

Interface that should be used by nodes that access the OMERO credentials environments

Cellpose3PluginApplicationSettings - Class in org.hkijena.jipipe.plugins.cellpose

Cellpose3PluginApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.cellpose.Cellpose3PluginApplicationSettings

Cellpose3SegmentationInferenceAlgorithm - Class in org.hkijena.jipipe.plugins.cellpose.algorithms.cp3

Cellpose3SegmentationInferenceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

Cellpose3SegmentationInferenceAlgorithm(Cellpose3SegmentationInferenceAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

Cellpose3SegmentationTrainingAlgorithm - Class in org.hkijena.jipipe.plugins.cellpose.algorithms.cp3

Cellpose3SegmentationTrainingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

Cellpose3SegmentationTrainingAlgorithm(Cellpose3SegmentationTrainingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

Cellpose3SegmentationTrainingTweaksSettings - Class in org.hkijena.jipipe.plugins.cellpose.parameters.cp3

Cellpose3SegmentationTrainingTweaksSettings() - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTrainingTweaksSettings

Cellpose3SegmentationTrainingTweaksSettings(Cellpose3SegmentationTrainingTweaksSettings) - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTrainingTweaksSettings

Cellpose3SegmentationTweaksSettings - Class in org.hkijena.jipipe.plugins.cellpose.parameters.cp3

Cellpose3SegmentationTweaksSettings() - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTweaksSettings

Cellpose3SegmentationTweaksSettings(Cellpose3SegmentationTweaksSettings) - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTweaksSettings

CellposeImageInfo - Class in org.hkijena.jipipe.plugins.cellpose.utils

CellposeImageInfo(int) - Constructor for class org.hkijena.jipipe.plugins.cellpose.utils.CellposeImageInfo

CellposeModelData - Class in org.hkijena.jipipe.plugins.cellpose.datatypes

Wrapper around Cellpose models

CellposeModelData(String) - Constructor for class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData

CellposeModelData(Path) - Constructor for class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData

CellposeModelData(byte[], String) - Constructor for class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData

CellposeModelData(CellposeModelData) - Constructor for class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData

CellposeModelData.Metadata - Class in org.hkijena.jipipe.plugins.cellpose.datatypes

CellposeModelInfo - Class in org.hkijena.jipipe.plugins.cellpose.utils

CellposeModelInfo() - Constructor for class org.hkijena.jipipe.plugins.cellpose.utils.CellposeModelInfo

CellposePlugin - Class in org.hkijena.jipipe.plugins.cellpose

CellposePlugin() - Constructor for class org.hkijena.jipipe.plugins.cellpose.CellposePlugin

CellposePluginProjectSettings - Class in org.hkijena.jipipe.plugins.cellpose

CellposePluginProjectSettings() - Constructor for class org.hkijena.jipipe.plugins.cellpose.CellposePluginProjectSettings

cellposeROIJsonToImageJ(Path) - Static method in class org.hkijena.jipipe.plugins.cellpose.utils.CellposeUtils

Converts ROI in a custom Json format to ROI2DListData

CellposeSegmentationEnhancementSettings_Old - Class in org.hkijena.jipipe.plugins.cellpose.legacy.parameters

Deprecated.

CellposeSegmentationEnhancementSettings_Old() - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationEnhancementSettings_Old

Deprecated.

CellposeSegmentationEnhancementSettings_Old(CellposeSegmentationEnhancementSettings_Old) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationEnhancementSettings_Old

Deprecated.

CellposeSegmentationModelSettings_Old - Class in org.hkijena.jipipe.plugins.cellpose.legacy.parameters

Deprecated.

CellposeSegmentationModelSettings_Old() - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationModelSettings_Old

Deprecated.

CellposeSegmentationModelSettings_Old(CellposeSegmentationModelSettings_Old) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationModelSettings_Old

Deprecated.

CellposeSegmentationOutputSettings_Old - Class in org.hkijena.jipipe.plugins.cellpose.legacy.parameters

Deprecated.

Used by the old Cellpose1InferenceAlgorithm

CellposeSegmentationOutputSettings_Old() - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationOutputSettings_Old

Deprecated.

CellposeSegmentationOutputSettings_Old(CellposeSegmentationOutputSettings_Old) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationOutputSettings_Old

Deprecated.

CellposeSegmentationPerformanceSettings_Old - Class in org.hkijena.jipipe.plugins.cellpose.legacy.parameters

Deprecated.

CellposeSegmentationPerformanceSettings_Old() - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationPerformanceSettings_Old

Deprecated.

CellposeSegmentationPerformanceSettings_Old(CellposeSegmentationPerformanceSettings_Old) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationPerformanceSettings_Old

Deprecated.

CellposeSegmentationThresholdSettings_Old - Class in org.hkijena.jipipe.plugins.cellpose.legacy.parameters

Deprecated.

CellposeSegmentationThresholdSettings_Old() - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationThresholdSettings_Old

Deprecated.

CellposeSegmentationThresholdSettings_Old(CellposeSegmentationThresholdSettings_Old) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationThresholdSettings_Old

Deprecated.

CellposeSizeModelData - Class in org.hkijena.jipipe.plugins.cellpose.datatypes

Wrapper around Cellpose models

CellposeSizeModelData(String) - Constructor for class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData

CellposeSizeModelData(Path) - Constructor for class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData

CellposeSizeModelData(byte[], String) - Constructor for class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData

CellposeSizeModelData(CellposeSizeModelData) - Constructor for class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData

CellposeSizeModelData.Metadata - Class in org.hkijena.jipipe.plugins.cellpose.datatypes

CellposeUtils - Class in org.hkijena.jipipe.plugins.cellpose.utils

center - Variable in class org.hkijena.jipipe.utils.PointRange

CenteredRectangleImageJ2ShapeData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.shapes

CenteredRectangleImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData

CenteredRectangleImageJ2ShapeData(RectangleShape) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData

CenteredRectangleImageJ2ShapeData(CenteredRectangleImageJ2ShapeData) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData

centerImage() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

centerX - Variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines

centerY - Variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines

ChamferDistanceMap2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap

ChamferDistanceMap2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap2DAlgorithm

Instantiates a new node type.

ChamferDistanceMap2DAlgorithm(ChamferDistanceMap2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap2DAlgorithm

Instantiates a new node type.

ChamferDistanceMap3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap

ChamferDistanceMap3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap3DAlgorithm

Instantiates a new node type.

ChamferDistanceMap3DAlgorithm(ChamferDistanceMap3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap3DAlgorithm

Instantiates a new node type.

changed(DocumentEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopDocumentChangeListener

All-in-one event for insertion, removal, change

ChangedEvent(Object) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeApplicationSettingsRegistry.ChangedEvent

ChangedEvent(Object) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeRecentProjectsRegistry.ChangedEvent

ChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.registries.JIPipeApplicationSettingsRegistry.ChangedEventEmitter

ChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.registries.JIPipeRecentProjectsRegistry.ChangedEventEmitter

changedUpdate(DocumentEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopDocumentChangeListener

changedUpdate(DocumentEvent, Shape, ViewFactory) - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Invoked when the Elements attributes have changed.

ChangeFilamentEdgePropertiesExpressionAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

ChangeFilamentEdgePropertiesExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesExpressionAlgorithm

ChangeFilamentEdgePropertiesExpressionAlgorithm(ChangeFilamentEdgePropertiesExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesExpressionAlgorithm

ChangeFilamentEdgePropertiesManuallyAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

ChangeFilamentEdgePropertiesManuallyAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesManuallyAlgorithm

ChangeFilamentEdgePropertiesManuallyAlgorithm(ChangeFilamentEdgePropertiesManuallyAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesManuallyAlgorithm

ChangeFilamentVertexPropertiesExpressionAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

ChangeFilamentVertexPropertiesExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

ChangeFilamentVertexPropertiesExpressionAlgorithm(ChangeFilamentVertexPropertiesExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

ChangeFilamentVertexPropertiesManuallyAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

ChangeFilamentVertexPropertiesManuallyAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

ChangeFilamentVertexPropertiesManuallyAlgorithm(ChangeFilamentVertexPropertiesManuallyAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

ChangeImageMetadataFromExpressionsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata

Wrapper around RoiManager

ChangeImageMetadataFromExpressionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata.ChangeImageMetadataFromExpressionsAlgorithm

Instantiates a new node type.

ChangeImageMetadataFromExpressionsAlgorithm(ChangeImageMetadataFromExpressionsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata.ChangeImageMetadataFromExpressionsAlgorithm

Instantiates a new node type.

ChangeRoi3DPropertiesAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify

ChangeRoi3DPropertiesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

ChangeRoi3DPropertiesAlgorithm(ChangeRoi3DPropertiesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

ChangeRoi3DPropertiesFromExpressionsAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify

ChangeRoi3DPropertiesFromExpressionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

ChangeRoi3DPropertiesFromExpressionsAlgorithm(ChangeRoi3DPropertiesFromExpressionsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify

ChangeRoi3DPropertiesFromTableAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify

ChangeRoi3DPropertiesFromTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

ChangeRoi3DPropertiesFromTableAlgorithm(ChangeRoi3DPropertiesFromTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

ChangeRoi3DPropertiesFromTableAlgorithm.MetadataEntry - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify

ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm

ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm(ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm

ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

ChangeRoiPropertiesAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Wrapper around RoiManager

ChangeRoiPropertiesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

Instantiates a new node type.

ChangeRoiPropertiesAlgorithm(ChangeRoiPropertiesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

Instantiates a new node type.

ChangeRoiPropertiesFromAnnotationsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Wrapper around RoiManager

ChangeRoiPropertiesFromAnnotationsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

Instantiates a new node type.

ChangeRoiPropertiesFromAnnotationsAlgorithm(ChangeRoiPropertiesFromAnnotationsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

Instantiates a new node type.

ChangeRoiPropertiesFromExpressionsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Wrapper around RoiManager

ChangeRoiPropertiesFromExpressionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

Instantiates a new node type.

ChangeRoiPropertiesFromExpressionsAlgorithm(ChangeRoiPropertiesFromExpressionsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

Instantiates a new node type.

ChangeRoiPropertiesFromExpressionsAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

ChangeRoiPropertiesFromTableAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Wrapper around RoiManager

ChangeRoiPropertiesFromTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

ChangeRoiPropertiesFromTableAlgorithm(ChangeRoiPropertiesFromTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

ChangeRoiPropertiesFromTableAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Channel() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel

Deprecated.

Channel(Color) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel

Deprecated.

Channel(Color, double) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel

Deprecated.

Channel(OverlayImagesAlgorithm.Channel) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel

Deprecated.

channelsToRGB(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Converted a 3-channel image into RGB (reducing the dimensionality)

checkAndAskIfFileExists(Component, Path, String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Checks if a file exists and asks the user if it should be overwritten

CheckBoxIcon - Class in org.hkijena.jipipe.utils.ui

Taken from MetalIconFactory

CheckBoxIcon(Color) - Constructor for class org.hkijena.jipipe.utils.ui.CheckBoxIcon

CheckBoxMenuItemIcon - Class in org.hkijena.jipipe.utils.ui

Taken from MetalIconFactory

CheckBoxMenuItemIcon(Color) - Constructor for class org.hkijena.jipipe.utils.ui.CheckBoxMenuItemIcon

checkPythonSettings(JIPipeValidationReportContext, JIPipeValidationReport) - Static method in class org.hkijena.jipipe.plugins.cellpose.Cellpose2PluginApplicationSettings

Checks if the Python settings are valid or reports an invalid state

checkPythonSettings(JIPipeValidationReportContext, JIPipeValidationReport) - Static method in class org.hkijena.jipipe.plugins.cellpose.Cellpose3PluginApplicationSettings

Checks if the Python settings are valid or reports an invalid state

checkScriptParametersValidity(JIPipeCustomParameterCollection, JIPipeValidationReportContext, JIPipeValidationReport) - Static method in class org.hkijena.jipipe.utils.scripting.JythonUtils

checkScriptValidity(String, JIPipeCustomParameterCollection, JIPipeValidationReportContext, JIPipeValidationReport) - Static method in class org.hkijena.jipipe.utils.scripting.JythonUtils

checkSyntax(String) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

Checks the syntax of an expression.

checkUnindexedNormalsArray(float[], float[]) - Static method in class org.hkijena.jipipe.plugins.scene3d.utils.Scene3DUtils

checkUnindexedPolygonArray(float[]) - Static method in class org.hkijena.jipipe.plugins.scene3d.utils.Scene3DUtils

checkUpdateSites(JIPipeRegistryIssues, List<JIPipeDependency>, Progress, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.JIPipe

Checks the update sites of all extensions and stores the results in the issues

choosePath() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPathEditorComponent

Opens the file chooser

CircularHoughSegmentation2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect

Segments using a Hough circle transform

CircularHoughSegmentation2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

CircularHoughSegmentation2DAlgorithm(CircularHoughSegmentation2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

Copies the algorithm

CLAHEContrastEnhancer - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast

Applies CLAHE image enhancing

CLAHEContrastEnhancer(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer

CLAHEContrastEnhancer(CLAHEContrastEnhancer) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer

Copies the algorithm

ClampFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.math

ClampFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.math.ClampFunction

ClampNegativeColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a min(0, x) function

ClampNegativeColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.ClampNegativeColumnOperation

ClampPositiveColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a max(0, x) function

ClampPositiveColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.ClampPositiveColumnOperation

classExists(String) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

ClassFilter - Interface in org.hkijena.jipipe.utils.classfilters

ClassicWatershedSegmentationAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment

ClassicWatershedSegmentationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm

ClassicWatershedSegmentationAlgorithm(ClassicWatershedSegmentationAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm

cleanGraph(JIPipeGraph, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun

cleanup() - Method in class org.hkijena.jipipe.api.registries.JIPipeRecentProjectsRegistry

cleanup(Map<String, Path>, Map<String, Path>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

cleanupIJ1ChunkSize(int[]) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ZARRUtils

clear(boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Removes all rows from this table

clear() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

clear() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal

clear() - Method in class org.hkijena.jipipe.api.history.JIPipeDummyGraphHistoryJournal

clear() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Clears the journal

clear() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal

clear() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Clears this graph

clear() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Removes all parameters

clear() - Method in class org.hkijena.jipipe.api.registries.JIPipeRecentProjectsRegistry

clear() - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection

clear() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.FileChooserHistory

Clears the entire history.

clear() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Removes all components

clear() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMessagePanel

clear() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopUserFriendlyErrorUI

clear() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon

Clears the ribbon.

clear() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

Clears the table

clear() - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

clearAll(JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache

Clears the cache

clearAll(UUID, boolean, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache

Clears the cache of the specified node

clearAll(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache

clearAll(UUID, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache

ClearCacheNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

ClearCacheNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.ClearCacheNodeUIContextAction

clearCurrentMask() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

clearData(boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Removes all rows from this table

ClearedEvent(JIPipeCache, UUID) - Constructor for class org.hkijena.jipipe.api.cache.JIPipeCache.ClearedEvent

ClearedEventEmitter() - Constructor for class org.hkijena.jipipe.api.cache.JIPipeCache.ClearedEventEmitter

clearHistory() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNext

clearInputSlots(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Removes all input slots

clearItems() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.properties.JIPipeDesktopGraphEditorErrorPanel

clearLocations() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Removes all location information added via setLocationWithin()

clearLog() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

clearMask() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegMask

Set to true every pixel of the full-size mask.

clearOutdated(JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache

Removes all outdated entries

clearOutdated(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache

clearOutputSlots(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Removes all output slots

clearOverlays() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

clearPreviewCache() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

clearQueue() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

Removes all enqueued (but not running tasks)

clearROIs() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

clearROIs(boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

clearSchedule(String) - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

clearSelection() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

Clears the algorithm selection

clearSelection() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Clears the list of selected algorithms

clearSeries() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

Removes all series

clearSlotData(boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Clears all data slots

clickArrowButton(String) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPane

CLIIJ2DataToImageWindowImageJExporter - Class in org.hkijena.jipipe.plugins.clij2.compat

CLIIJ2DataToImageWindowImageJExporter() - Constructor for class org.hkijena.jipipe.plugins.clij2.compat.CLIIJ2DataToImageWindowImageJExporter

CLIJ2DataFromImageWindowImageJImporter - Class in org.hkijena.jipipe.plugins.clij2.compat

CLIJ2DataFromImageWindowImageJImporter() - Constructor for class org.hkijena.jipipe.plugins.clij2.compat.CLIJ2DataFromImageWindowImageJImporter

Clij2ExecuteKernelIterating - Class in org.hkijena.jipipe.plugins.clij2.algorithms

Clij2ExecuteKernelIterating(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelIterating

Clij2ExecuteKernelIterating(Clij2ExecuteKernelIterating) - Constructor for class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelIterating

Clij2ExecuteKernelSimpleIterating - Class in org.hkijena.jipipe.plugins.clij2.algorithms

Clij2ExecuteKernelSimpleIterating(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelSimpleIterating

Clij2ExecuteKernelSimpleIterating(Clij2ExecuteKernelSimpleIterating) - Constructor for class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelSimpleIterating

Clij2PullAlgorithm - Class in org.hkijena.jipipe.plugins.clij2.algorithms

Clij2PullAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2PullAlgorithm

Clij2PullAlgorithm(Clij2PullAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2PullAlgorithm

Clij2PushAlgorithm - Class in org.hkijena.jipipe.plugins.clij2.algorithms

Clij2PushAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2PushAlgorithm

Clij2PushAlgorithm(Clij2PushAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2PushAlgorithm

CLIJCommandNode - Class in org.hkijena.jipipe.plugins.clij2

CLIJCommandNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.clij2.CLIJCommandNode

CLIJCommandNode(CLIJCommandNode) - Constructor for class org.hkijena.jipipe.plugins.clij2.CLIJCommandNode

CLIJCommandNodeInfo - Class in org.hkijena.jipipe.plugins.clij2

CLIJCommandNodeInfo(Context, PluginInfo<CLIJMacroPlugin>, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

CLIJCommandNodeInfo.OutputTableColumnInfo - Class in org.hkijena.jipipe.plugins.clij2

CLIJControlPanel - Class in org.hkijena.jipipe.plugins.clij2.ui

Graphical control panel for CLIJ

CLIJControlPanel(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.clij2.ui.CLIJControlPanel

CLIJControlPanelJIPipeDesktopMenuExtension - Class in org.hkijena.jipipe.plugins.clij2.ui

Adds a menu item that allows to control CLIJ

CLIJControlPanelJIPipeDesktopMenuExtension(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.clij2.ui.CLIJControlPanelJIPipeDesktopMenuExtension

Creates a new instance

CLIJImageData - Class in org.hkijena.jipipe.plugins.clij2.datatypes

Contains a CLIJ image

CLIJImageData(ClearCLBuffer) - Constructor for class org.hkijena.jipipe.plugins.clij2.datatypes.CLIJImageData

Initializes a new instance from an existing buffer

CLIJImageData(ImagePlusData) - Constructor for class org.hkijena.jipipe.plugins.clij2.datatypes.CLIJImageData

Initializes an instance by copying data from ImagePlusData

CLIJImageData(CLIJImageData) - Constructor for class org.hkijena.jipipe.plugins.clij2.datatypes.CLIJImageData

Makes a copy

CLIJImageDataViewer - Class in org.hkijena.jipipe.plugins.clij2.viewers

CLIJImageDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.clij2.viewers.CLIJImageDataViewer

CLIJImageToImagePlusDataConverter - Class in org.hkijena.jipipe.plugins.clij2.datatypes

Converter from CLIJImageData to ImagePlusData

CLIJImageToImagePlusDataConverter(Class<? extends JIPipeData>) - Constructor for class org.hkijena.jipipe.plugins.clij2.datatypes.CLIJImageToImagePlusDataConverter

CLIJPlugin - Class in org.hkijena.jipipe.plugins.clij2

Integrates CLIJ

CLIJPlugin() - Constructor for class org.hkijena.jipipe.plugins.clij2.CLIJPlugin

CLIJPluginApplicationSettings - Class in org.hkijena.jipipe.plugins.clij2

Settings for CLIJ

CLIJPluginApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings

CLIJPluginApplicationSettings.ContrastEnhancerSettings - Class in org.hkijena.jipipe.plugins.clij2

CLIJSplitMode - Enum in org.hkijena.jipipe.plugins.clij2

cloneTableModel(TableModel) - Static method in class org.hkijena.jipipe.utils.TableUtils

Copies a table

close() - Method in class org.hkijena.jipipe.api.data.browser.JIPipeLocalDataBrowser

close() - Method in class org.hkijena.jipipe.api.data.browser.JIPipeLocalDataTableBrowser

close() - Method in interface org.hkijena.jipipe.api.data.JIPipeData

close() - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore

close() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage

close() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage

close() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage

close() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPWriteDataStorage

close() - Method in class org.hkijena.jipipe.api.JIPipeFixedThreadPool

close() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfoOutputStream

close() - Method in class org.hkijena.jipipe.plugins.clij2.datatypes.CLIJImageData

close() - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROGateway

close() - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROImageUploader

close() - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

close() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI.ExternalEditor

close() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI.ExternalFileExternalEditor

close() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI.TabExternalEditor

close() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI.WindowExternalEditor

close() - Method in class org.hkijena.jipipe.utils.IJLogToJIPipeProgressInfoPump

close() - Method in class org.hkijena.jipipe.utils.ui.BusyCursor

CloseAllImageJWindowsTool - Class in org.hkijena.jipipe.plugins.tools

CloseAllImageJWindowsTool(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.tools.CloseAllImageJWindowsTool

Creates a new instance

closeAllTabs(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Closes all tabs

closeAllTabsExcept(JIPipeDesktopTabPane.DocumentTab, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Closes all tabs except the provided one.

closeMessage() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMessagePanel.Message

closeTab(JIPipeDesktopTabPane.DocumentTab, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Closes a tab.

closeTab(JIPipeDesktopTabPane.DocumentTab) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Closes the tab.

ClusteringSettings() - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm.ClusteringSettings

ClusteringSettings(DBSCANClusteringAlgorithm.ClusteringSettings) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm.ClusteringSettings

ClusteringSettings() - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm.ClusteringSettings

ClusteringSettings(FuzzyKMeansClusteringAlgorithm.ClusteringSettings) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm.ClusteringSettings

ClusteringSettings() - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm.ClusteringSettings

ClusteringSettings(KMeansClusteringAlgorithm.ClusteringSettings) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm.ClusteringSettings

collapse(IOInterfaceAlgorithm) - Static method in class org.hkijena.jipipe.api.compartments.algorithms.IOInterfaceAlgorithm

Removes the interface and directly connects the inputs and outputs

CollapseIOInterfaceNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

CollapseIOInterfaceNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.CollapseIOInterfaceNodeUIContextAction

CollectBackupsRun - Class in org.hkijena.jipipe.api.backups

CollectBackupsRun() - Constructor for class org.hkijena.jipipe.api.backups.CollectBackupsRun

Coloc2Node - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization

Coloc2Node(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

Coloc2Node(Coloc2Node) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

Coloc2Node.Settings - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization

ColocResult(DataContainer<T>, AnalysisResults<T>) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.CustomColoc2.ColocResult

COLOR_CONSTANT - Static variable in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderUI

COLOR_DISABLED_1 - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

COLOR_DISABLED_2 - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

COLOR_ERROR - Static variable in class org.hkijena.jipipe.utils.UIUtils

COLOR_EXTENSION - Static variable in class org.hkijena.jipipe.plugins.nodetemplate.JIPipeNodeTemplateListCellRenderer

COLOR_FUNCTION - Static variable in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderUI

COLOR_GLOBAL - Static variable in class org.hkijena.jipipe.plugins.nodetemplate.JIPipeNodeTemplateListCellRenderer

COLOR_HIGHLIGHT - Static variable in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantInputPreviewPanelTable

COLOR_HIGHLIGHT - Static variable in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerNodeOutputUI

COLOR_HIGHLIGHT_CELL - Static variable in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantInputPreviewPanelTable

COLOR_HIGHLIGHT_GREEN - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

COLOR_MAP - Static variable in class org.hkijena.jipipe.utils.ColorUtils

COLOR_OPERATOR - Static variable in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderUI

COLOR_PROJECT - Static variable in class org.hkijena.jipipe.plugins.nodetemplate.JIPipeNodeTemplateListCellRenderer

COLOR_RESIZE_HANDLE_BORDER - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

COLOR_RESIZE_HANDLE_FILL - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

COLOR_RUN_BUTTON_ICON - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

COLOR_SELECTED - Static variable in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.TrackRenderer

COLOR_SLOT_CACHED - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

COLOR_SLOT_DISCONNECTED - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

COLOR_STRING - Static variable in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderUI

COLOR_SUCCESS - Static variable in class org.hkijena.jipipe.utils.UIUtils

COLOR_UNSELECTED - Static variable in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.TrackRenderer

COLOR_VARIABLE - Static variable in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderUI

ColorChosenEvent(JIPipeDesktopColorChooserButton, Color) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopColorChooserButton.ColorChosenEvent

ColorChosenEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopColorChooserButton.ColorChosenEventEmitter

ColorDeserializer - Class in org.hkijena.jipipe.plugins.parameters.library.colors

Deserializer for Color

ColorDeserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.colors.ColorDeserializer

ColorDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.colors

Parameter editor for String

ColorDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.colors.ColorDesktopParameterEditorUI

ColorImageData - Interface in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color

Annotates a data type as color image

ColorListParameter - Class in org.hkijena.jipipe.plugins.parameters.library.colors

ColorListParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.colors.ColorListParameter

ColorListParameter(Collection<Color>) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.colors.ColorListParameter

ColorMap - Enum in org.hkijena.jipipe.plugins.parameters.library.colors

All available color maps

ColorMap - Enum in org.hkijena.jipipe.plugins.plots.utils

ColorMapEnumItemInfo - Class in org.hkijena.jipipe.plugins.parameters.library.colors

EnumItemInfo implementation for ColorMap

ColorMapEnumItemInfo() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.colors.ColorMapEnumItemInfo

Creates a new instance

ColorMapEnumItemInfo - Class in org.hkijena.jipipe.plugins.plots.utils

ColorMapEnumItemInfo() - Constructor for class org.hkijena.jipipe.plugins.plots.utils.ColorMapEnumItemInfo

ColorMapIcon - Class in org.hkijena.jipipe.plugins.parameters.library.colors

Icon that renders a color map entry

ColorMapIcon() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.colors.ColorMapIcon

Creates a 16x16 black icon

ColorMapIcon(int, int) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.colors.ColorMapIcon

Creates a viridis icon

ColorMapIcon(int, int, ColorMap) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.colors.ColorMapIcon

ColorMapIcon - Class in org.hkijena.jipipe.plugins.plots.utils

ColorMapIcon(int, int, ColorMap) - Constructor for class org.hkijena.jipipe.plugins.plots.utils.ColorMapIcon

ColorMapSupplier - Class in org.hkijena.jipipe.plugins.plots.utils

Provides a color palette

ColorMapSupplier(Paint[]) - Constructor for class org.hkijena.jipipe.plugins.plots.utils.ColorMapSupplier

ColorPixel5DExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

Variable source that allows to address x, y

ColorPixel5DExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ColorPixel5DExpressionParameterVariablesInfo

ColorRoi3DByNameAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify

ColorRoi3DByNameAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ColorRoi3DByNameAlgorithm

Instantiates a new node type.

ColorRoi3DByNameAlgorithm(ColorRoi3DByNameAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ColorRoi3DByNameAlgorithm

Instantiates a new node type.

ColorRoi3DByStatisticsAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify

Wrapper around RoiManager

ColorRoi3DByStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ColorRoi3DByStatisticsAlgorithm

ColorRoi3DByStatisticsAlgorithm(ColorRoi3DByStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ColorRoi3DByStatisticsAlgorithm

ColorRoiByNameAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

ColorRoiByNameAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByNameAlgorithm

Instantiates a new node type.

ColorRoiByNameAlgorithm(ColorRoiByNameAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByNameAlgorithm

Instantiates a new node type.

ColorRoiByStatisticsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Wrapper around RoiManager

ColorRoiByStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm

Instantiates a new node type.

ColorRoiByStatisticsAlgorithm(ColorRoiByStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm

Instantiates a new node type.

ColorSerializer - Class in org.hkijena.jipipe.plugins.parameters.library.colors

Serializer for Color

ColorSerializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.colors.ColorSerializer

ColorSpace - Interface in org.hkijena.jipipe.plugins.imagejdatatypes.colorspace

A class that governs conversion between color spaces

ColorSpaceConverterAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color

ColorSpaceConverterAlgorithm(JIPipeNodeInfo, Class<? extends ImagePlusData>) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color.ColorSpaceConverterAlgorithm

ColorSpaceConverterAlgorithm(ColorSpaceConverterAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color.ColorSpaceConverterAlgorithm

ColorThresholdExpression2D - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color

ColorThresholdExpression2D(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ColorThresholdExpression2D

ColorThresholdExpression2D(ColorThresholdExpression2D) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ColorThresholdExpression2D

ColorToGreyscaleExpression2D - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

ColorToGreyscaleExpression2D(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.ColorToGreyscaleExpression2D

ColorToGreyscaleExpression2D(ColorToGreyscaleExpression2D) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.ColorToGreyscaleExpression2D

colorToHexString(Color) - Static method in class org.hkijena.jipipe.utils.ColorUtils

Converts a color to a Hex string

ColorUtils - Class in org.hkijena.jipipe.utils

ColorUtils() - Constructor for class org.hkijena.jipipe.utils.ColorUtils

ColorUtils.GradientStop - Class in org.hkijena.jipipe.utils

Column() - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column

Column(DefineParametersFromTableAlgorithm.Column) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column

Column() - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column

Column(GenerateParametersFromExpressionAlgorithm.Column) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column

column - Variable in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.Index

ColumnContentType - Enum in org.hkijena.jipipe.plugins.tables

Available column content types

ColumnOperation - Interface in org.hkijena.jipipe.plugins.tables

An operation on a TableColumnData

ColumnOperationAdapterFunction - Class in org.hkijena.jipipe.plugins.expressions.functions

An adapter from ColumnOperation to ExpressionFunction.

ColumnOperationAdapterFunction(ColumnOperation, String) - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.ColumnOperationAdapterFunction

ColumnOperationEntry(String, ColumnOperation, String, String, String) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ColumnOperationEntry

Creates a new entry

ColumnsToAnnotationsAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.columns

ColumnsToAnnotationsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnsToAnnotationsAlgorithm

ColumnsToAnnotationsAlgorithm(ColumnsToAnnotationsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnsToAnnotationsAlgorithm

ColumnToNumericAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.columns

Algorithm that removes columns

ColumnToNumericAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnToNumericAlgorithm

Creates a new instance

ColumnToNumericAlgorithm(ColumnToNumericAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnToNumericAlgorithm

Creates a copy

ColumnToStringAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.columns

Algorithm that removes columns

ColumnToStringAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnToStringAlgorithm

Creates a new instance

ColumnToStringAlgorithm(ColumnToStringAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnToStringAlgorithm

Creates a copy

CombineChannelsToRGBAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

CombineChannelsToRGBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.CombineChannelsToRGBAlgorithm

CombineChannelsToRGBAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.CombineChannelsToRGBAlgorithm

combineSlices(Map<ImageSliceIndex, ImageProcessor>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Combines the slices in the map into one image.

CommonDirectoriesProvider - Class in org.hkijena.jipipe.desktop.commons.components.filechoosernext

Provides common directories for a custom file chooser.

CommonDirectoriesProvider() - Constructor for class org.hkijena.jipipe.desktop.commons.components.filechoosernext.CommonDirectoriesProvider

CommonDirectory - Class in org.hkijena.jipipe.desktop.commons.components.filechoosernext

CommonDirectory(Path, CommonDirectory.DirectoryType) - Constructor for class org.hkijena.jipipe.desktop.commons.components.filechoosernext.CommonDirectory

CommonDirectory.DirectoryType - Enum in org.hkijena.jipipe.desktop.commons.components.filechoosernext

compare(T, T) - Method in class org.hkijena.jipipe.utils.NaturalOrderComparator

comparePlugins(PluginInfo<?>, PluginInfo<?>) - Static method in class org.hkijena.jipipe.JIPipe

Compares two plugins and sorts them by priority

comparePriority(JIPipeParameterAccess, JIPipeParameterAccess) - Static method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess

Compares the priority

compareTo(JIPipeTextAnnotation) - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

compareTo(JIPipeArtifact) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

compareTo(JIPipeDataInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo

compareTo(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

compareTo(JIPipeSingleIterationStep) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

compareTo(JIPipeNotification) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification

compareTo(JIPipeParameterTypeInfo) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterTypeInfo

compareTo(JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

compareTo(JIPipeDesktopGraphNodeUIActiveArea) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUIActiveArea

compareTo(ConnectVerticesAlgorithm.EdgeCandidate) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm.EdgeCandidate

compareTo(ConnectVerticesFastAlgorithm.EdgeCandidate) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm.EdgeCandidate

compareTo(FixOverlapsNonBranchingAlgorithm.EdgeCandidate) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm.EdgeCandidate

compareTo(LegacyHoughLines.HoughLine) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines.HoughLine

compareTo(ColorUtils.GradientStop) - Method in class org.hkijena.jipipe.utils.ColorUtils.GradientStop

compareTo(RankedData<T>) - Method in class org.hkijena.jipipe.utils.search.RankedData

compareTo(JIPipeDesktopDockPanel.Panel) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

compareVersions(String, String) - Static method in class org.hkijena.jipipe.utils.StringUtils

Compares two version strings.

compareVersions(String, String) - Static method in class org.hkijena.jipipe.utils.VersionUtils

Similar to StringUtils compareVersions, but supports the 'Development' version

CompartmentAddedEvent(JIPipeProjectCompartment) - Constructor for class org.hkijena.jipipe.api.project.JIPipeProject.CompartmentAddedEvent

CompartmentAddedEventEmitter() - Constructor for class org.hkijena.jipipe.api.project.JIPipeProject.CompartmentAddedEventEmitter

CompartmentNodeTypeCategory - Class in org.hkijena.jipipe.api.compartments.algorithms

CompartmentNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory

CompartmentRemovedEvent(JIPipeProjectCompartment, UUID) - Constructor for class org.hkijena.jipipe.api.project.JIPipeProject.CompartmentRemovedEvent

CompartmentRemovedEventEmitter() - Constructor for class org.hkijena.jipipe.api.project.JIPipeProject.CompartmentRemovedEventEmitter

composePixel(int...) - Method in interface org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.ColorSpace

Converts an array of channel values into a pixel

composePixel(int...) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.GreyscaleColorSpace

composePixel(int...) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.HSBColorSpace

composePixel(int...) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.IgnoreColorSpace

composePixel(int...) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.LABColorSpace

composePixel(int...) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.RGBColorSpace

CompositeIcon - Class in org.hkijena.jipipe.utils

CompositeIcon(Icon, Icon, int, int) - Constructor for class org.hkijena.jipipe.utils.CompositeIcon

COMPOSITEIMAGE - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageScienceUtils

CompositeLayer(int) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D.CompositeLayer

CompositeLayer(JIPipeDesktopLegacyImageViewerPanel2D.CompositeLayer) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D.CompositeLayer

CompositeManagerPlugin2D - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d

CompositeManagerPlugin2D(JIPipeDesktopLegacyImageViewer) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.CompositeManagerPlugin2D

computeDefaultBarWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator

There is no hard codded value for the width of the scalebar, when the plugin is called for the first time in an ImageJ instance, a defautl value for the width will be computed by this method.

computeEdgeFeatures(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

computeOptimalChunkSizes(int[]) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ZARRUtils

Computes an optimal chunk size for each axis according to a power‐of‐two heuristic.

computeTrackFeatures(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

ConcatenateByParameter - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Applies subfolder navigation to each input folder

ConcatenateByParameter(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ConcatenateByParameter

ConcatenateByParameter(ConcatenateByParameter) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ConcatenateByParameter

Copies the algorithm

ConcatenatePaths - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Applies subfolder navigation to each input folder

ConcatenatePaths(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ConcatenatePaths

ConcatenatePaths(ConcatenatePaths) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ConcatenatePaths

Copies the algorithm

ConcaveHullMoreiraSantos - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

ConcaveHull.java - 14/10/16

ConcaveHullMoreiraSantos.Pair<K,V> - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

ConditionalInverterAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary

ConditionalInverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConditionalInverterAlgorithm

ConditionalInverterAlgorithm(ConditionalInverterAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConditionalInverterAlgorithm

ConditionalInverterAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary

Configuration() - Constructor for class org.hkijena.jipipe.plugins.python.installers.SelectCondaEnvPythonInstaller.Configuration

Configuration() - Constructor for class org.hkijena.jipipe.plugins.python.installers.SelectSystemPythonInstaller.Configuration

Configuration() - Constructor for class org.hkijena.jipipe.plugins.python.installers.SelectVirtualEnvPythonInstaller.Configuration

configure(ImageJExportParameters) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

Overrides parameters if enabled

configure(ImageJImportParameters) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRef

Overrides parameters if enabled

configureDefaultImageJAdapters(Class<? extends JIPipeData>, String, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Sets the default ImageJ adapters

configureDefaultImageJAdapters(Class<? extends JIPipeData>, ImageJDataImporter, ImageJDataExporter) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Sets the default ImageJ adapters

ConfigureJIPipeNode - Annotation Type in org.hkijena.jipipe.api

Annotations used for organizing elements

configureTwoInputExample(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.FastImageArithmeticsAlgorithm

connect(JIPipeDataSlot, JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Connects an output slot to an input slot.

connect(JIPipeDataSlot, JIPipeDataSlot, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Connects an output slot to an input slot.

connectCompartments(JIPipeProjectCompartment, JIPipeProjectCompartment) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Connects two compartments

connectDismissTo(JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox

Connects all dismisses in this notification inbox to another notification inbox

connectedComponents3D(ImagePlus, Neighborhood3D, int) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageJAlgorithmUtils

ConnectedComponentsLabeling2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary

ConnectedComponentsLabeling2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling2DAlgorithm

Instantiates a new node type.

ConnectedComponentsLabeling2DAlgorithm(ConnectedComponentsLabeling2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling2DAlgorithm

Instantiates a new node type.

ConnectedComponentsLabeling3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary

ConnectedComponentsLabeling3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling3DAlgorithm

Instantiates a new node type.

ConnectedComponentsLabeling3DAlgorithm(ConnectedComponentsLabeling3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling3DAlgorithm

Instantiates a new node type.

ConnectHighlight(JIPipeDesktopGraphNodeUISlotActiveArea, JIPipeDesktopGraphNodeUISlotActiveArea) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.ConnectHighlight

connectSlot(JIPipeDataSlot, JIPipeDataSlot) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Connects the two slots

ConnectVerticesAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

ConnectVerticesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

ConnectVerticesAlgorithm(ConnectVerticesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

ConnectVerticesAlgorithm.EdgeCandidate - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

ConnectVerticesFastAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

ConnectVerticesFastAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

ConnectVerticesFastAlgorithm(ConnectVerticesFastAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

ConnectVerticesFastAlgorithm.EdgeCandidate - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

CONSTANT_E - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

CONSTANT_FALSE - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

CONSTANT_NAN - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

CONSTANT_NEGATIVE_INFINITY - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

CONSTANT_NEWLINE - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

CONSTANT_NULL - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

CONSTANT_PI - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

CONSTANT_POSITIVE_INFINITY - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

CONSTANT_TAU - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

CONSTANT_TRUE - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

CONSTANTS - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.FastImageArithmeticsAlgorithm

ConstantSpotSegmentation3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.segmentation

ConstantSpotSegmentation3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.ConstantSpotSegmentation3DAlgorithm

ConstantSpotSegmentation3DAlgorithm(ConstantSpotSegmentation3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.ConstantSpotSegmentation3DAlgorithm

ConsumingDynamicDebouncer<T> - Class in org.hkijena.jipipe.utils.debounce

ConsumingDynamicDebouncer(long, TimeUnit) - Constructor for class org.hkijena.jipipe.utils.debounce.ConsumingDynamicDebouncer

ConsumingDynamicDebouncer(long) - Constructor for class org.hkijena.jipipe.utils.debounce.ConsumingDynamicDebouncer

containingCollection(Class<? extends JIPipeParameterCollection>) - Static method in class org.hkijena.jipipe.plugins.parameters.library.collections.ParameterCollectionList

Creates an instance from a template collection class.

containingSingle(Class<?>) - Static method in class org.hkijena.jipipe.plugins.parameters.library.collections.ParameterCollectionList

Creates an instance that contains a parameter of a specific value

contains(Object) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

contains(T) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetParameter

contains(Object) - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

containsAll(Collection<?>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

containsAll(Collection<?>) - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

containsColumn(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

containsColumn(String) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Returns true if the column exists

containsKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Returns true if there is a parameter with given key

containsNode(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns true if this graph contains the algorithm

containsNode(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns true if the slot is in this graph

containsNode(UUID) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

containsOnlyRoisOfType(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Returns if this ROI list only contains ROI of given type

ContainsOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

Operator that tests if the left string is contained in the right string

ContainsOperator(int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.ContainsOperator

ContainsOperator2 - Class in org.hkijena.jipipe.plugins.expressions.operators

Operator that tests if the left string is contained in the right string

ContainsOperator2(int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.ContainsOperator2

containsPanel(String) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

ContainsStringPredicateFunction - Class in org.hkijena.jipipe.plugins.expressions.functions

ContainsStringPredicateFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.ContainsStringPredicateFunction

ContentAwareFill - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

ContentAwareFill() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ContentAwareFill

context() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

context() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

context() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopSplashScreen

ContextHelpEvent(JIPipeDesktopFormPanel, MarkdownText) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.ContextHelpEvent

Creates a new instance

ContextHelpEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.ContextHelpEventEmitter

ContinueOnFailureSettings() - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.ContinueOnFailureSettings

ContinueOnFailureSettings(JIPipeRuntimePartition.ContinueOnFailureSettings) - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.ContinueOnFailureSettings

Contrast(ImageProcessor, int, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm

ContrastEnhancerSettings() - Constructor for class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings.ContrastEnhancerSettings

ContrastLocalAutoThreshold2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local

Segmenter node that thresholds via an auto threshold Based on code from fiji.threshold.Auto_Local_Threshold

ContrastLocalAutoThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm

ContrastLocalAutoThreshold2DAlgorithm(ContrastLocalAutoThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm

Copies the algorithm

CONTROL_HIGHLIGHTED - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

CONTROL_STYLE_CHECKBOX - Static variable in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

CONTROL_STYLE_LIST - Static variable in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

CONTROL_STYLE_PANEL - Static variable in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

CONTROL_TEXT_COLOR - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

CONTROL_TEXT_COLOR - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

CONTROL_TOGGLED - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

convert(JIPipeData, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.data.JIPipeDataConverter

Converts the supported input type to the output type

convert(Class<? extends JIPipeData>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Converts this data table in-place and sets the accepted data type

convert(JIPipeData, Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Converts the input data to the output data type

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ImplicitResultsTableDataConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.clij2.datatypes.CLIJImageToImagePlusDataConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.clij2.datatypes.ImagePlusDataToCLIJImageDataConverter

convert(Object) - Method in class org.hkijena.jipipe.plugins.expressions.functions.convert.ToBooleanFunction

convert(Object) - Method in class org.hkijena.jipipe.plugins.expressions.functions.convert.ToIntegerFunction

convert(Object) - Method in class org.hkijena.jipipe.plugins.expressions.functions.convert.ToNumber2Function

convert(Object) - Method in class org.hkijena.jipipe.plugins.expressions.functions.convert.ToNumberFunction

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImplicitPathTypeConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.FilamentsToRoi3dDataTypeConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.FilamentsToRoiDataTypeConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.SpotsToRoiConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.converters.ImageJ1ToImageJ2Converter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.converters.ImageJ2ToImageJ1Converter

convert(ImagePlus, ColorSpace, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.ColorSpace

Converts the image into the current color space

convert(int, ColorSpace) - Method in interface org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.ColorSpace

Converts a single pixel from its source image space into this one

convert(ImagePlus, ColorSpace, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.GreyscaleColorSpace

convert(int, ColorSpace) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.GreyscaleColorSpace

convert(ImagePlus, ColorSpace, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.HSBColorSpace

convert(int, ColorSpace) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.HSBColorSpace

convert(ImagePlus, ColorSpace, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.IgnoreColorSpace

convert(int, ColorSpace) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.IgnoreColorSpace

convert(ImagePlus, ColorSpace, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.LABColorSpace

convert(int, ColorSpace) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.LABColorSpace

convert(ImagePlus, ColorSpace, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.RGBColorSpace

convert(int, ColorSpace) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.RGBColorSpace

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.ImagePlusToOMEImageTypeConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.ImageToLUTTypeConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.ImplicitImageTypeConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.LUTToImageTypeConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.OMEImageToImagePlusTypeConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.OmeImageToOMEXMLTypeConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.OMEImageToROITypeConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.PlotToImageTypeConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImageJImageToImpImageDataTypeConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageToImageJImageDataTypeConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.multiparameters.converters.ParametersDataToResultsTableDataConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.ImageJToOpenCvDataTypeConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvToImageJDataTypeConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.plots.converters.PlotToTableConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.StringDataConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.DoubleArrayColumnToTableConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.StringArrayColumnToTableConverter

convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.datatypes.PathDataToJIPipeOutputConverter

convert3ChannelToRGBIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Converts an ImagePlus to the color space of this data.

convertAlphaToCheckerboard(Image, int) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils

convertAlphaToCheckerboard(Image, int, Color, Color) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils

ConvertAnnotationTableToAnnotatedTables - Class in org.hkijena.jipipe.plugins.tables.nodes.annotations

Algorithm that integrates columns

ConvertAnnotationTableToAnnotatedTables(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.annotations.ConvertAnnotationTableToAnnotatedTables

Creates a new instance

ConvertAnnotationTableToAnnotatedTables(ConvertAnnotationTableToAnnotatedTables) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.annotations.ConvertAnnotationTableToAnnotatedTables

Creates a copy

convertByteProcessorToMat(ByteProcessor) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

convertColorProcessorToMat(ColorProcessor) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

ConvertColumnsAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.columns

Algorithm that integrates columns

ConvertColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.ConvertColumnsAlgorithm

Creates a new instance

ConvertColumnsAlgorithm(ConvertColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.ConvertColumnsAlgorithm

Creates a copy

ConvertDataToOutputPath - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Applies subfolder navigation to each input folder

ConvertDataToOutputPath(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ConvertDataToOutputPath

ConvertDataToOutputPath(ConvertDataToOutputPath) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ConvertDataToOutputPath

Copies the algorithm

ConvertDepthAlgorithm - Class in org.hkijena.jipipe.plugins.opencv.nodes

ConvertDepthAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.opencv.nodes.ConvertDepthAlgorithm

ConvertDepthAlgorithm(ConvertDepthAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.opencv.nodes.ConvertDepthAlgorithm

convertDisplayOperationsToImportOperations() - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Converts all registered JIPipeDesktopDataDisplayOperation entries into JIPipeLegacyDataImportOperation

ConverterAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms

Algorithm that converts any type to any other type

ConverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.ConverterAlgorithm

ConverterAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.ConverterAlgorithm

ConvertFilamentCyclesToROIAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.convert

ConvertFilamentCyclesToROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentCyclesToROIAlgorithm

ConvertFilamentCyclesToROIAlgorithm(ConvertFilamentCyclesToROIAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentCyclesToROIAlgorithm

ConvertFilamentsTo3DMeshAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.convert

ConvertFilamentsTo3DMeshAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

ConvertFilamentsTo3DMeshAlgorithm(ConvertFilamentsTo3DMeshAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

ConvertFilamentsToLabels2Algorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.convert

ConvertFilamentsToLabels2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

ConvertFilamentsToLabels2Algorithm(ConvertFilamentsToLabels2Algorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

ConvertFilamentsToLabelsAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.convert

ConvertFilamentsToLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm

ConvertFilamentsToLabelsAlgorithm(ConvertFilamentsToLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm

ConvertFilamentsToMaskAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.convert

ConvertFilamentsToMaskAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm

ConvertFilamentsToMaskAlgorithm(ConvertFilamentsToMaskAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm

ConvertFilamentsToRGBAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.convert

ConvertFilamentsToRGBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRGBAlgorithm

ConvertFilamentsToRGBAlgorithm(ConvertFilamentsToRGBAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRGBAlgorithm

ConvertFilamentsToRoi3DAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.convert

ConvertFilamentsToRoi3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm

ConvertFilamentsToRoi3DAlgorithm(ConvertFilamentsToRoi3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm

ConvertFilamentsToRoiAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.convert

ConvertFilamentsToRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm

ConvertFilamentsToRoiAlgorithm(ConvertFilamentsToRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm

convertFloatProcessorToMat(FloatProcessor) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorHSBData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorLABData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorRGBData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorHSBData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorLABData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorRGBData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale16UData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale32FData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale8UData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleMaskData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.ImagePlus2DData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorHSBData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorLABData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorRGBData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale16UData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale32FData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale8UData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleMaskData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.ImagePlus3DData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorHSBData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorLABData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorRGBData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale16UData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale32FData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale8UData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleMaskData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.ImagePlus4DData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorHSBData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorLABData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorRGBData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale16UData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale32FData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale8UData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleMaskData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.ImagePlus5DData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFT2DData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFT3DData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFT4DData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFT5DData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFTData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale16UData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale32FData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale8UData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleMaskData

Converts the incoming image data into the current format.

convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

Converts the incoming image data into the current format.

convertFromJIPipeToModule(IntegerList) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.ByteArrayParameterImageJ2ModuleInput

convertFromJIPipeToModule(DoubleList) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.DoubleArrayParameterImageJ2ModuleInput

convertFromJIPipeToModule(DoubleList) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.FloatArrayParameterImageJ2ModuleInput

convertFromJIPipeToModule(IntegerList) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.IntegerArrayParameterImageJ2ModuleInput

convertFromJIPipeToModule(LongList) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.LongArrayParameterImageJ2ModuleInput

convertFromJIPipeToModule(IntegerList) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.ShortArrayParameterImageJ2ModuleInput

convertFromJIPipeToModule(StringList) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.StringArrayParameterImageJ2ModuleInput

convertFromJIPipeToModule(JIPipeType) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.ParameterImageJ2ModuleInput

convertFromJIPipeToModule(Boolean) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.BooleanParameterImageJ2ModuleInput

convertFromJIPipeToModule(Byte) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.ByteParameterImageJ2ModuleInput

convertFromJIPipeToModule(Double) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.DoubleParameterImageJ2ModuleInput

convertFromJIPipeToModule(Float) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.FloatParameterImageJ2ModuleInput

convertFromJIPipeToModule(Integer) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.IntegerParameterImageJ2ModuleInput

convertFromJIPipeToModule(Long) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.LongParameterImageJ2ModuleInput

convertFromJIPipeToModule(Short) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.ShortParameterImageJ2ModuleInput

convertFromJIPipeToModule(String) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.StringParameterImageJ2ModuleInput

convertFromJIPipeToModule(Double) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.RealTypeParameterImageJ2ModuleInput

convertFromJIPipeToModule(JIPipeType) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput

convertFromJIPipeToModule(Boolean) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.BooleanParameterImageJ2ModuleOutput

convertFromJIPipeToModule(Byte) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.ByteParameterImageJ2ModuleOutput

convertFromJIPipeToModule(Double) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.DoubleParameterImageJ2ModuleOutput

convertFromJIPipeToModule(Float) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.FloatParameterImageJ2ModuleOutput

convertFromJIPipeToModule(Integer) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.IntegerParameterImageJ2ModuleOutput

convertFromJIPipeToModule(Long) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.LongParameterImageJ2ModuleOutput

convertFromJIPipeToModule(Short) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.ShortParameterImageJ2ModuleOutput

convertFromJIPipeToModule(String) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.StringParameterImageJ2ModuleOutput

convertFromJIPipeToModule(Double) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.RealTypeParameterImageJ2ModuleOutput

convertFromModuleToJIPipe(byte[]) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.ByteArrayParameterImageJ2ModuleInput

convertFromModuleToJIPipe(double[]) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.DoubleArrayParameterImageJ2ModuleInput

convertFromModuleToJIPipe(float[]) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.FloatArrayParameterImageJ2ModuleInput

convertFromModuleToJIPipe(int[]) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.IntegerArrayParameterImageJ2ModuleInput

convertFromModuleToJIPipe(long[]) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.LongArrayParameterImageJ2ModuleInput

convertFromModuleToJIPipe(short[]) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.ShortArrayParameterImageJ2ModuleInput

convertFromModuleToJIPipe(String[]) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.StringArrayParameterImageJ2ModuleInput

convertFromModuleToJIPipe(ModuleType) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.ParameterImageJ2ModuleInput

convertFromModuleToJIPipe(Boolean) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.BooleanParameterImageJ2ModuleInput

convertFromModuleToJIPipe(Byte) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.ByteParameterImageJ2ModuleInput

convertFromModuleToJIPipe(Double) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.DoubleParameterImageJ2ModuleInput

convertFromModuleToJIPipe(Float) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.FloatParameterImageJ2ModuleInput

convertFromModuleToJIPipe(Integer) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.IntegerParameterImageJ2ModuleInput

convertFromModuleToJIPipe(Long) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.LongParameterImageJ2ModuleInput

convertFromModuleToJIPipe(Short) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.ShortParameterImageJ2ModuleInput

convertFromModuleToJIPipe(String) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.StringParameterImageJ2ModuleInput

convertFromModuleToJIPipe(RealType) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.RealTypeParameterImageJ2ModuleInput

convertFromModuleToJIPipe(ModuleType) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput

convertFromModuleToJIPipe(Boolean) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.BooleanParameterImageJ2ModuleOutput

convertFromModuleToJIPipe(Byte) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.ByteParameterImageJ2ModuleOutput

convertFromModuleToJIPipe(Double) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.DoubleParameterImageJ2ModuleOutput

convertFromModuleToJIPipe(Float) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.FloatParameterImageJ2ModuleOutput

convertFromModuleToJIPipe(Integer) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.IntegerParameterImageJ2ModuleOutput

convertFromModuleToJIPipe(Long) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.LongParameterImageJ2ModuleOutput

convertFromModuleToJIPipe(Short) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.ShortParameterImageJ2ModuleOutput

convertFromModuleToJIPipe(String) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.StringParameterImageJ2ModuleOutput

convertFromModuleToJIPipe(RealType) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.RealTypeParameterImageJ2ModuleOutput

convertGlobToRegex(String) - Static method in class org.hkijena.jipipe.utils.StringUtils

Converts a standard POSIX Shell globbing pattern into a regular expression pattern.

convertHSBToRGB(ImagePlus, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Converts an HSB image to RGB (re-using the same components)

ConvertImageAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert

ConvertImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageAlgorithm

ConvertImageAlgorithm(ConvertImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageAlgorithm

ConvertImageTo16BitAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert

ConvertImageTo16BitAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo16BitAlgorithm

ConvertImageTo16BitAlgorithm(ConvertImageTo16BitAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo16BitAlgorithm

ConvertImageTo16BitAutoContrastAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert

ConvertImageTo16BitAutoContrastAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo16BitAutoContrastAlgorithm

ConvertImageTo16BitAutoContrastAlgorithm(ConvertImageTo16BitAutoContrastAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo16BitAutoContrastAlgorithm

ConvertImageTo32BitAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert

ConvertImageTo32BitAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo32BitAlgorithm

ConvertImageTo32BitAlgorithm(ConvertImageTo32BitAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo32BitAlgorithm

ConvertImageTo8BitAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert

ConvertImageTo8BitAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo8BitAlgorithm

ConvertImageTo8BitAlgorithm(ConvertImageTo8BitAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo8BitAlgorithm

ConvertImageTo8BitAutoContrastAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert

ConvertImageTo8BitAutoContrastAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo8BitAutoContrastAlgorithm

ConvertImageTo8BitAutoContrastAlgorithm(ConvertImageTo8BitAutoContrastAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo8BitAutoContrastAlgorithm

ConvertImageToHSBAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert

ConvertImageToHSBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageToHSBAlgorithm

ConvertImageToHSBAlgorithm(ConvertImageToHSBAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageToHSBAlgorithm

ConvertImageToLABAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert

ConvertImageToLABAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageToLABAlgorithm

ConvertImageToLABAlgorithm(ConvertImageToLABAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageToLABAlgorithm

ConvertImageToRGBAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert

ConvertImageToRGBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageToRGBAlgorithm

ConvertImageToRGBAlgorithm(ConvertImageToRGBAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageToRGBAlgorithm

ConvertImpImageToImagePlusAlgorithm - Class in org.hkijena.jipipe.plugins.imp.nodes

ConvertImpImageToImagePlusAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imp.nodes.ConvertImpImageToImagePlusAlgorithm

ConvertImpImageToImagePlusAlgorithm(ConvertImpImageToImagePlusAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imp.nodes.ConvertImpImageToImagePlusAlgorithm

ConvertingColumnOperation - Interface in org.hkijena.jipipe.plugins.tables

A column operation that returns an output that has the same size as the input

ConvertingTableColumnProcessorParameter - Class in org.hkijena.jipipe.plugins.tables.parameters.processors

A parameter that models processing an input column via an conversion function and generating an output column

ConvertingTableColumnProcessorParameter() - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.processors.ConvertingTableColumnProcessorParameter

ConvertingTableColumnProcessorParameter(ConvertingTableColumnProcessorParameter) - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.processors.ConvertingTableColumnProcessorParameter

ConvertingTableColumnProcessorParameterList - Class in org.hkijena.jipipe.plugins.tables.parameters.collections

ConvertingTableColumnProcessorParameterList() - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.collections.ConvertingTableColumnProcessorParameterList

Creates a new instance

ConvertingTableColumnProcessorParameterList(ConvertingTableColumnProcessorParameterList) - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.collections.ConvertingTableColumnProcessorParameterList

Creates a copy

convertJIPipeToModuleData(ImageJ2DatasetData) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.DatasetImageJ2ModuleInput

convertJIPipeToModuleData(JIPipeDataType) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.DataSlotModuleInput

convertJIPipeToModuleData(ImagePlusData) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.ImagePlusImageJ2ModuleInput

convertJIPipeToModuleData(ImageJ2DatasetData) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.IntervalImageJ2ModuleInput

convertJIPipeToModuleData(ImageJ2DatasetData) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.IterableImageJ2ModuleInput

convertJIPipeToModuleData(ImageJ2OutOfBoundsFactoryData) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.OutOfBoundsFactoryImageJ2ModuleInput

convertJIPipeToModuleData(ImageJ2DatasetData) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.RandomAccessibleImageJ2ModuleInput

convertJIPipeToModuleData(ImageJ2ShapeData) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.ShapeImageJ2ModuleInput

convertJIPipeToModuleData(ImageJ2DatasetData) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.DatasetImageJ2ModuleOutput

convertJIPipeToModuleData(JIPipeDataType) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.DataSlotModuleOutput

convertJIPipeToModuleData(ImagePlusData) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.ImagePlusImageJ2ModuleOutput

convertJIPipeToModuleData(ImageJ2DatasetData) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.IntervalImageJ2ModuleOutput

convertJIPipeToModuleData(ImageJ2DatasetData) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.RandomAccessibleImageJ2ModuleOutput

convertLABToRGB(ImagePlus, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Converts an LAB image to RGB L is stored unsigned (0-255) A is stored signed (-128-127) B is stored signed (-128-127)

convertMatToByteProcessor(opencv_core.Mat) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

convertMatToColorProcessor(opencv_core.Mat) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

convertMatToFloatProcessor(opencv_core.Mat) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

convertMatToShortProcessor(opencv_core.Mat) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

convertMergingToSingleDataBatches(List<JIPipeMultiIterationStep>) - Static method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

Builds a single iteration step where each slot only can have one row

convertMesh(List<Point3f>) - Static method in class org.hkijena.jipipe.plugins.ij3d.IJ3DUtils

convertModuleToJIPipeData(Dataset) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.DatasetImageJ2ModuleInput

convertModuleToJIPipeData(ModuleDataType) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.DataSlotModuleInput

convertModuleToJIPipeData(ImagePlus) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.ImagePlusImageJ2ModuleInput

convertModuleToJIPipeData(Interval) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.IntervalImageJ2ModuleInput

convertModuleToJIPipeData(Iterable) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.IterableImageJ2ModuleInput

convertModuleToJIPipeData(OutOfBoundsFactory) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.OutOfBoundsFactoryImageJ2ModuleInput

convertModuleToJIPipeData(RandomAccessible) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.RandomAccessibleImageJ2ModuleInput

convertModuleToJIPipeData(Shape) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.ShapeImageJ2ModuleInput

convertModuleToJIPipeData(Dataset) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.DatasetImageJ2ModuleOutput

convertModuleToJIPipeData(ModuleDataType) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.DataSlotModuleOutput

convertModuleToJIPipeData(ImagePlus) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.ImagePlusImageJ2ModuleOutput

convertModuleToJIPipeData(Interval) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.IntervalImageJ2ModuleOutput

convertModuleToJIPipeData(RandomAccessible) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.RandomAccessibleImageJ2ModuleOutput

ConvertParametersToTableAlgorithm - Class in org.hkijena.jipipe.plugins.multiparameters.nodes

ConvertParametersToTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.ConvertParametersToTableAlgorithm

ConvertParametersToTableAlgorithm(ConvertParametersToTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.ConvertParametersToTableAlgorithm

convertPathsToAbsolute() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileListDataSource

convertPathsToAbsolute() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderListDataSource

convertPathsToAbsolute() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathListDataSource

convertPathsToRelative() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileListDataSource

convertPathsToRelative() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderListDataSource

convertPathsToRelative() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathListDataSource

convertRGBToHSB(ImagePlus, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Converts an RGB image to HSB (re-using the same components)

convertRGBToLAB(ImagePlus, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Converts an RGB image to LAB L is stored unsigned (0-255) A is stored signed (-128-127) B is stored signed (-128-127)

ConvertROIToFilamentsAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.convert

ConvertROIToFilamentsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertROIToFilamentsAlgorithm

ConvertROIToFilamentsAlgorithm(ConvertROIToFilamentsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertROIToFilamentsAlgorithm

convertShortProcessorToMat(ShortProcessor) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

ConvertSpotsToRoiNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters

ConvertSpotsToRoiNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode

ConvertSpotsToRoiNode(ConvertSpotsToRoiNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode

convertTab(int, int) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPane

convertTo(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

ConvertToAnnotationTable - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Removes a specified annotation

ConvertToAnnotationTable(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.ConvertToAnnotationTable

ConvertToAnnotationTable(ConvertToAnnotationTable) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.ConvertToAnnotationTable

Copies the algorithm

convertToBitDepthIfNeeded(ImagePlus, int) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

convertToColorHSBIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Converts an ImagePlus to the color space of this data.

convertToColorLABIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Converts an ImagePlus to the color space of this data.

convertToColorRGBIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Converts an ImagePlus to the color space of this data.

convertToConsensusBitDepthIfNeeded(Collection<ImagePlus>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

ConvertToExportedPath - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

ConvertToExportedPath(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ConvertToExportedPath

ConvertToExportedPath(ConvertToExportedPath) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ConvertToExportedPath

convertToGrayscale16UIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Converts an ImagePlus to the color space of this data.

convertToGrayscale32FIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Converts an ImagePlus to the color space of this data.

convertToGreyscale8UIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Converts an ImagePlus to the color space of this data.

convertToGreyscaleIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Converts an ImagePlus to the color space of this data.

convertToNumericColumn(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Converts the column into a numeric column.

convertToPixels(Quantity) - Method in class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

convertToRGB(ImagePlus, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.ColorSpace

Converts the color image into RGB (in-place)

convertToRGB(int) - Method in interface org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.ColorSpace

Converts a single pixel from its source image space into RGB

convertToRGB(ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.GreyscaleColorSpace

convertToRGB(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.GreyscaleColorSpace

convertToRGB(ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.HSBColorSpace

convertToRGB(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.HSBColorSpace

convertToRGB(ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.IgnoreColorSpace

convertToRGB(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.IgnoreColorSpace

convertToRGB(ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.LABColorSpace

convertToRGB(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.LABColorSpace

convertToRGB(ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.RGBColorSpace

convertToRGB(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.RGBColorSpace

convertToRoi(List<Point2D>) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.OutlineRoiConcaveHullMoreiraSantosAlgorithm

convertToSameTypeIfNeeded(ImagePlus, ImagePlus, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Converts this image to the same type as the other one if needed

convertToStringColumn(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Converts the column into a string column.

ConvertTracksToRoiNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters

ConvertTracksToRoiNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertTracksToRoiNode

ConvertTracksToRoiNode(ConvertTracksToRoiNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertTracksToRoiNode

ConvertTypeAlgorithm - Class in org.hkijena.jipipe.plugins.opencv.nodes

ConvertTypeAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.opencv.nodes.ConvertTypeAlgorithm

ConvertTypeAlgorithm(ConvertTypeAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.opencv.nodes.ConvertTypeAlgorithm

ConvexifyAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary

ConvexifyAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConvexifyAlgorithm

Instantiates a new node type.

ConvexifyAlgorithm(ConvexifyAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConvexifyAlgorithm

Instantiates a new node type.

ConvolveByImage2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve

Wrapper around Convolver

ConvolveByImage2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve.ConvolveByImage2DAlgorithm

Instantiates a new node type.

ConvolveByImage2DAlgorithm(ConvolveByImage2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve.ConvolveByImage2DAlgorithm

Creates a copy

ConvolveByParameter2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve

Wrapper around Convolver

ConvolveByParameter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve.ConvolveByParameter2DAlgorithm

Instantiates a new node type.

ConvolveByParameter2DAlgorithm(ConvolveByParameter2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve.ConvolveByParameter2DAlgorithm

Creates a copy

convolveSlice(Convolver, int, int, float[], ImageProcessor) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

copyBufferedImage(BufferedImage) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils

Copy a BufferedImage

copyBufferedImageToARGB(BufferedImage) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils

Copy a BufferedImage

copyBufferedImageToGray(BufferedImage) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils

copyBufferedImageToRGB(BufferedImage) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils

Copy a BufferedImage

copyColumnSchemaFrom(ResultsTableData) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Adds missing columns from the other table

CopyContainingFolderDataImportOperation - Class in org.hkijena.jipipe.plugins.core.data

Import operation that copies the containing folder path into the clipboard.

CopyContainingFolderDataImportOperation() - Constructor for class org.hkijena.jipipe.plugins.core.data.CopyContainingFolderDataImportOperation

copyCurrentSliceToClipboard() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

copyDirectory(Path, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.PathUtils

copyDirectory(Path, Path, Predicate<Path>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.PathUtils

CopyFilamentsAcrossZCTAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.process

CopyFilamentsAcrossZCTAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm

CopyFilamentsAcrossZCTAlgorithm(CopyFilamentsAcrossZCTAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm

CopyFilamentsAcrossZCTAlgorithm.NewEdgesSettings - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.process

copyFrom(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

Copies the properties to another node template

copyFrom(FilamentsDrawer) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

copyFrom(SpotDrawer) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer

copyFrom(TrackDrawer) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

copyFrom(RoiDrawer) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

copyFrom(JIPipeDataByMetadataExporter) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDataExporterApplicationSettings

Copies parameters into the settings storage

copyHyperstackDimensions(ImagePlus, ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Copies the hyperstack dimensions from one image to another src and target must have the same number of slices!

copyImage(BufferedImage) - Method in class org.hkijena.jipipe.utils.ui.CopyImageToClipboard

CopyImageToClipboard - Class in org.hkijena.jipipe.utils.ui

CopyImageToClipboard() - Constructor for class org.hkijena.jipipe.utils.ui.CopyImageToClipboard

copyMetadata(JIPipeDataSlotInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

Copies additional parameters such as custom names from the other slot

copyMetadata(ROI3D) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

copyMetadata(ImagePlusData) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

copyMetadataFrom(Scene3DNode) - Method in interface org.hkijena.jipipe.plugins.scene3d.model.Scene3DGeometry

copyMetadataFrom(Scene3DNode) - Method in interface org.hkijena.jipipe.plugins.scene3d.model.Scene3DNode

Copies metadata from another node

CopyNFunction - Class in org.hkijena.jipipe.plugins.expressions.functions

CopyNFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.CopyNFunction

copyOrLink(Path, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.PathUtils

CopyPath - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Applies subfolder navigation to each input folder

CopyPath(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.CopyPath

CopyPath(CopyPath) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.CopyPath

Copies the algorithm

CopyPathDataDisplayOperation - Class in org.hkijena.jipipe.plugins.filesystem.resultanalysis

CopyPathDataDisplayOperation() - Constructor for class org.hkijena.jipipe.plugins.filesystem.resultanalysis.CopyPathDataDisplayOperation

CopyPhysicalDimensionsBetweenImagesAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration

CopyPhysicalDimensionsBetweenImagesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.CopyPhysicalDimensionsBetweenImagesAlgorithm

CopyPhysicalDimensionsBetweenImagesAlgorithm(CopyPhysicalDimensionsBetweenImagesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.CopyPhysicalDimensionsBetweenImagesAlgorithm

copyPixelsBetweenImages(ImagePlus, ImagePlus, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Copies all data from the source to the target image

copySlotConfiguration(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Copies the slot configuration from the other algorithm to this algorithm Override this method for special configuration cases

copyString() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopDataTableRowDisplayUtil

copyTo(ImageJExportParameters) - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters

copyTo(ImageJImportParameters) - Method in class org.hkijena.jipipe.api.compat.ImageJImportParameters

copyTo(JIPipeDynamicParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Copies the parameter configuration into the target

copyToClipboard(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Copies the string to the clipboard

CoreImageJUtils - Class in org.hkijena.jipipe.utils

CoreImageJUtils() - Constructor for class org.hkijena.jipipe.utils.CoreImageJUtils

CorePlugin - Class in org.hkijena.jipipe.plugins.core

The core extension

CorePlugin() - Constructor for class org.hkijena.jipipe.plugins.core.CorePlugin

CorePythonPlugin - Class in org.hkijena.jipipe.plugins.python

Python nodes

CorePythonPlugin() - Constructor for class org.hkijena.jipipe.plugins.python.CorePythonPlugin

CornerHarris2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect

CornerHarris2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

CornerHarris2DAlgorithm(CornerHarris2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

CornerHarris2DAlgorithm.OutputParameters - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect

CosineColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a sine function

CosineColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.CosineColumnOperation

CounterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm.CounterVariablesInfo

CountROIAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure

CountROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.CountROIAlgorithm

CountROIAlgorithm(CountROIAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.CountROIAlgorithm

countRoisOfType(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Counts all ROIs of given type

CrasherAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps

CrasherAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.CrasherAlgorithm

CrasherAlgorithm(CrasherAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.CrasherAlgorithm

create(String, JIPipeDataContext...) - Static method in interface org.hkijena.jipipe.api.data.context.JIPipeDataContext

Creates a new data context

create(JIPipeGraphNode, JIPipeDataContext...) - Static method in interface org.hkijena.jipipe.api.data.context.JIPipeDataContext

Creates a new data context

create(JIPipeDesktopGraphCanvasUI, Set<JIPipeGraphNode>) - Static method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

create() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeInputSlot

create() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeOutputSlot

createAndConfigureNode(Point, Point) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

createAndConfigureNode(Point, Point) - Method in class org.hkijena.jipipe.plugins.graphannotation.tools.ArrowAnnotationGraphNodeTool

createAndConfigureNode(Point, Point) - Method in class org.hkijena.jipipe.plugins.graphannotation.tools.GroupBoxAnnotationGraphNodeTool

createAndConfigureNode(Point, Point) - Method in class org.hkijena.jipipe.plugins.graphannotation.tools.ImageBoxAnnotationGraphNodeTool

createAndConfigureNode(Point, Point) - Method in class org.hkijena.jipipe.plugins.graphannotation.tools.TextBoxAnnotationGraphNodeTool

createAnnotation(JIPipeData) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalDataAnnotationNameParameter

Creates a new annotation with the defined name and value

createAnnotation(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter

Creates a new annotation with the defined name and value

createAnnotation(String[]) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter

Creates a new annotation with the defined name and value

createAnnotation(Collection<String>) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter

Creates a new annotation with the defined name and value

createAnnotations(List<JIPipeTextAnnotation>, MetadataFacility, SecurityContext, DataObject) - Method in class org.hkijena.jipipe.plugins.omero.parameters.OMEROKeyValuePairToAnnotationImporter

createAnnotations(List<JIPipeTextAnnotation>, MetadataFacility, SecurityContext, DataObject) - Method in class org.hkijena.jipipe.plugins.omero.parameters.OMEROTagToAnnotationImporter

CreateArrayFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

CreateArrayFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.CreateArrayFunction

createBalloonHelpButton(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

createBlankCanvas(String, BitDepth) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

createBlankCanvas(String, int) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

createBlankCanvas(String, BitDepth) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

createBlankCanvas(String, int) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

createBlankCanvas(String, BitDepth) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

createBlankCanvas(String, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

createBorderlessReadonlyTextPane(String, boolean) - Static method in class org.hkijena.jipipe.utils.UIUtils

Creates a readonly text pane (that can do HTML)

createButton(String, Icon, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils

createButtonBorder(Color) - Static method in class org.hkijena.jipipe.utils.UIUtils

createCondaEnvironment(SelectCondaEnvPythonInstaller.Configuration) - Static method in class org.hkijena.jipipe.plugins.python.installers.SelectCondaEnvPythonInstaller

createContextual(DeserializationContext, BeanProperty) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameter.Deserializer

createContextual(DeserializationContext, BeanProperty) - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameter.Deserializer

createContextual(DeserializationContext, BeanProperty) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter.Deserializer

createContextual(DeserializationContext, BeanProperty) - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D.Deserializer

createContextual(DeserializationContext, BeanProperty) - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameter.Deserializer

createContextual(DeserializationContext, BeanProperty) - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameter.Deserializer

createControlBorder() - Static method in class org.hkijena.jipipe.utils.UIUtils

createControlBorder(Color) - Static method in class org.hkijena.jipipe.utils.UIUtils

createControlErrorBorder() - Static method in class org.hkijena.jipipe.utils.UIUtils

createData(Class<T>, Object...) - Static method in class org.hkijena.jipipe.JIPipe

Instantiates a data class with the provided parameters This method is helpful if output data is constructed based on slot types

createDataSet() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.BoxAndWhiskerCategoryJFreeChartPlotData

createDataSet() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CategoryJFreeChartPlotData

Creates a data set from the current series

createDataSet() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.PieJFreeChartPlotData

Creates a data set from the current series

createDataSet() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.StatisticalCategoryJFreeChartPlotData

createDataSet() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

Creates a data set from the current series

createDecreaseButton(int) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopArrowLessScrollBarUI

createDesktopImage() - Static method in class org.hkijena.jipipe.utils.ui.ScreenImage

Convenience method to create a BufferedImage of the desktop

createDialog(Component) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

createDirectories(Path) - Static method in class org.hkijena.jipipe.utils.PathUtils

Same as Files.createDirectories, but throws a RuntimeException

CreateDirectory - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Applies subfolder navigation to each input folder

CreateDirectory(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.CreateDirectory

CreateDirectory(CreateDirectory) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.CreateDirectory

Copies the algorithm

createDisplaySettings(SpotsCollectionData) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer

createDisplaySettings(TrackCollectionData) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

createDocumentation(String, String) - Static method in class org.hkijena.jipipe.utils.DocumentationUtils

createDocumentation(String, String, Class<?>) - Static method in class org.hkijena.jipipe.utils.DocumentationUtils

createDummyImage() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Creates a 2D 8-bit image that covers the region of all ROI

createDummyImageFor(Collection<ROI2DListData>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Creates a 2D 8-bit black image that covers the region of all provided ROI

createEditorInstance(JIPipeParameterAccess, JIPipeDesktopWorkbench, JIPipeParameterTree, Object) - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry

Creates editor for the parameter

createEmptyBorder(int) - Static method in class org.hkijena.jipipe.utils.UIUtils

createEntryPropertiesComponent(Component, Component, int, MarkdownText) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

createEntryPropertiesComponent(Component, Component, int, MarkdownText) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

createFactory() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.BorderImageJ2OutOfBoundsFactoryData

createFactory() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.ByteConstantValueImageJ2OutOfBoundsFactoryData

createFactory() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.DoubleConstantValueImageJ2OutOfBoundsFactoryData

createFactory() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.FloatConstantValueImageJ2OutOfBoundsFactoryData

createFactory() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.IntegerConstantValueImageJ2OutOfBoundsFactoryData

createFactory() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.LongConstantValueImageJ2OutOfBoundsFactoryData

createFactory() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.ShortConstantValueImageJ2OutOfBoundsFactoryData

createFactory() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.EmptyImageJ2OutOfBoundsFactory

createFactory() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.ImageJ2OutOfBoundsFactoryData

createFactory() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.MirrorImageJ2OutOfBoundsFactoryData

createFactory() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.PeriodicImageJ2OutOfBoundsFactoryData

createFlatButton(String, Icon, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils

createGlobalTempDirectory(String) - Static method in class org.hkijena.jipipe.utils.PathUtils

Create a unique subdirectory rooted at system-wide temporary directory

createGlobalTempFilePath(String, String) - Static method in class org.hkijena.jipipe.utils.PathUtils

Creates a path to a file that does not exist yet The file will be located in the system-wide temporary path

createGradientLUT(Color, Color) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm

createGrayscaleLUTFromGradient(List<ColorUtils.GradientStop>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

createHorizontalFillingSeparator() - Static method in class org.hkijena.jipipe.utils.UIUtils

CreateHSBColorFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.color

CreateHSBColorFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.color.CreateHSBColorFunction

createIconOnlyButton(String, Icon, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils

createIconTextHTMLTable(String, URL) - Static method in class org.hkijena.jipipe.utils.StringUtils

Creates an HTML table with an icon and text.

createIconTextHTMLTableElement(String, URL) - Static method in class org.hkijena.jipipe.utils.StringUtils

Creates an HTML table with an icon and text.

CreateIJ2OutOfBoundsFactoryAlgorithm - Class in org.hkijena.jipipe.plugins.imagej2.algorithms

CreateIJ2OutOfBoundsFactoryAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagej2.algorithms.CreateIJ2OutOfBoundsFactoryAlgorithm

CreateIJ2OutOfBoundsFactoryAlgorithm(CreateIJ2OutOfBoundsFactoryAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagej2.algorithms.CreateIJ2OutOfBoundsFactoryAlgorithm

CreateIJ2ShapeAlgorithm - Class in org.hkijena.jipipe.plugins.imagej2.algorithms

CreateIJ2ShapeAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagej2.algorithms.CreateIJ2ShapeAlgorithm

CreateIJ2ShapeAlgorithm(CreateIJ2ShapeAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagej2.algorithms.CreateIJ2ShapeAlgorithm

createImage(JComponent) - Static method in class org.hkijena.jipipe.utils.ui.ScreenImage

Create a BufferedImage for Swing components.

createImage(JComponent, Rectangle) - Static method in class org.hkijena.jipipe.utils.ui.ScreenImage

Create a BufferedImage for Swing components.

createImage(Component) - Static method in class org.hkijena.jipipe.utils.ui.ScreenImage

Create a BufferedImage for AWT components.

createImage(Rectangle) - Static method in class org.hkijena.jipipe.utils.ui.ScreenImage

Create a BufferedImage from a rectangular region on the screen.

createImage(JComponent) - Static method in class org.hkijena.jipipe.utils.ui.ScreenImageSVG

Create a BufferedImage for Swing components.

createImage(JComponent, Rectangle) - Static method in class org.hkijena.jipipe.utils.ui.ScreenImageSVG

Create a BufferedImage for Swing components.

createIncreaseButton(int) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopArrowLessScrollBarUI

createInfoLabel(String, String) - Static method in class org.hkijena.jipipe.utils.UIUtils

createInfoLabel(String, String, Icon) - Static method in class org.hkijena.jipipe.utils.UIUtils

createInstance(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

createInstance(Context) - Static method in class org.hkijena.jipipe.JIPipe

Helper to create JIPipe from a context.

createJLabel(String, Icon) - Static method in class org.hkijena.jipipe.utils.UIUtils

createJLabel(String, int) - Static method in class org.hkijena.jipipe.utils.UIUtils

createJLabel(String, Icon, int) - Static method in class org.hkijena.jipipe.utils.UIUtils

createKeyValuePairs(Map<String, String>, Collection<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.omero.parameters.AnnotationsToOMEROKeyValuePairExporter

CreateLABColorFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.color

CreateLABColorFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.color.CreateLABColorFunction

createLabel(Roi, int) - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiLabel

Generates a string label based on the ROI

CreateLaunchersTool - Class in org.hkijena.jipipe.plugins.tools

CreateLaunchersTool(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.tools.CreateLaunchersTool

Creates a new instance

createLayoutManager() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

createLeftAlignedButton(String, ImageIcon, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils

createLibNoImageJInstance(List<Class<? extends JIPipeJavaPlugin>>) - Static method in class org.hkijena.jipipe.JIPipe

Create a new JIPipe using initializeLibNoImageJ, which is suitable for using limited functions from within non-ImageJ applications.

createLine(int, int, int, int, int, int, float, int, int) - Method in class org.hkijena.jipipe.plugins.ij3d.utils.ExtendedObjectCreator3D

CreateLineMeshAlgorithm - Class in org.hkijena.jipipe.plugins.scene3d.nodes

CreateLineMeshAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.scene3d.nodes.CreateLineMeshAlgorithm

CreateLineMeshAlgorithm(CreateLineMeshAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.scene3d.nodes.CreateLineMeshAlgorithm

createLUTFromGradient(List<ColorUtils.GradientStop>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

CreateMapFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

CreateMapFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.CreateMapFunction

createMarkdownReader(MarkdownText, String[]) - Static method in class org.hkijena.jipipe.utils.UIUtils

Creates a JTextPane that displays Markdown content

createMenuItem(String, String, Icon, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils

createMenuTree(JMenu, Set<String>) - Static method in class org.hkijena.jipipe.utils.UIUtils

Creates a hierarchy of menus based on the menu paths vector

createMenuTree(JPopupMenu, Set<String>) - Static method in class org.hkijena.jipipe.utils.UIUtils

Creates a hierarchy of menus based on the menu paths vector

createModelInfo(List<JIPipeTextAnnotation>, CellposeModelData, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.cellpose.utils.CellposeUtils

createMontage(List<MontageCreator.InputEntry>, List<JIPipeTextAnnotation>, JIPipeExpressionVariablesMap, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

CreateNewCompartmentNodeDatabaseEntry - Class in org.hkijena.jipipe.api.nodes.database

CreateNewCompartmentNodeDatabaseEntry() - Constructor for class org.hkijena.jipipe.api.nodes.database.CreateNewCompartmentNodeDatabaseEntry

createNewContext() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Creates a context for new data that inherits direct predecessors from this iteration step's input

createNewContext() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Creates a context for new data that inherits direct predecessors from this iteration step's input

createNewEntry() - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

Creates a new entry

createNewEntry() - Method in class org.hkijena.jipipe.plugins.parameters.library.matrix.Matrix2DFloat

CreateNewNodeByExampleDatabaseEntry - Class in org.hkijena.jipipe.api.nodes.database

CreateNewNodeByExampleDatabaseEntry(String, JIPipeNodeExample) - Constructor for class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

CreateNewNodeByInfoDatabaseEntry - Class in org.hkijena.jipipe.api.nodes.database

CreateNewNodeByInfoDatabaseEntry(String, JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

CreateNewNodesByTemplateDatabaseEntry - Class in org.hkijena.jipipe.api.nodes.database

CreateNewNodesByTemplateDatabaseEntry(JIPipeNodeTemplate) - Constructor for class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

createNextButton() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernSpinnerUI

createNode(String) - Static method in class org.hkijena.jipipe.JIPipe

Creates a new node instance from its id

createNode(Class<T>) - Static method in class org.hkijena.jipipe.JIPipe

Creates a new node instance from its class.

createOptionsButton() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMemoryOptionsControl

CreatePairArrayFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

CreatePairArrayFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.CreatePairArrayFunction

createPanelBorder() - Static method in class org.hkijena.jipipe.utils.UIUtils

createPanelBorder(int, int, int, int) - Static method in class org.hkijena.jipipe.utils.UIUtils

createParameters() - Static method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

createPopupHelpButton(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

createPreviousButton() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernSpinnerUI

createProcessor(int, int, int) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

createReadonlyBorderlessTextArea(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Creates a readonly text area

createReadonlyBorderlessTextField(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Creates a readonly text field

createReadonlyTextArea(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Creates a readonly text area Cannot do HTML.

createReadonlyTextField(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Creates a readonly text field

createReadonlyTextPane(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Creates a readonly text pane (that can do HTML)

CreateRGBColorFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.color

CreateRGBColorFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.color.CreateRGBColorFunction

createRightIconTextHTMLTable(String, URL) - Static method in class org.hkijena.jipipe.utils.StringUtils

Same as createIconTextHTMLTable but the icon is on the right side

createRightIconTextHTMLTableElement(String, URL) - Static method in class org.hkijena.jipipe.utils.StringUtils

Same as createIconTextHTMLTableElement but the icon is on the right side

createRun(boolean, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorRunManager

createRun(boolean, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.actions.JIPipeDesktopCompartmentsGraphEditorRunManager

createRun(boolean, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.actions.JIPipeDesktopPipelineGraphEditorRunManager

createRunSetsManagementContextMenu(JMenu, Set<JIPipeGraphNode>, JIPipeDesktopWorkbench) - Static method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopRunSetsListEditor

createScaleBarOverlay() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator

Create and draw the scalebar using an Overlay.

createScreenshotClipboard() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

createScreenshotPNG() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Creates a screenshot of the whole graph compartment

createScreenshotSVG() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Creates a screenshot of the whole graph compartment

createSeriesTable() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

Generates an empty series table with the correct columns

createShape() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData

createShape() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.DiamondImageJ2ShapeData

createShape() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.DiamondTipsImageJ2ShapeData

createShape() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.EmptyImageJ2ShapeData

createShape() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData

createShape() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HyperSphereImageJ2ShapeData

createShape() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.ImageJ2ShapeData

createShape() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.PairOfPointsImageJ2ShapeData

createShape() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData

createShape() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.RectangleImageJ2ShapeData

createSingletonSlot(JIPipeData, JIPipeGraphNode) - Static method in class org.hkijena.jipipe.api.data.JIPipeDataSlot

Creates a new input slot that contains only one data item

CreateSphereMeshAlgorithm - Class in org.hkijena.jipipe.plugins.scene3d.nodes

CreateSphereMeshAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.scene3d.nodes.CreateSphereMeshAlgorithm

CreateSphereMeshAlgorithm(CreateSphereMeshAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.scene3d.nodes.CreateSphereMeshAlgorithm

CreateSpotDetectorNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors

CreateSpotDetectorNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNode

CreateSpotDetectorNode(CreateSpotDetectorNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNode

CreateSpotDetectorNodeInfo - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors

CreateSpotDetectorNodeInfo(SpotDetectorFactory<?>) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo

CreateSpotTrackerNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors

CreateSpotTrackerNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNode

CreateSpotTrackerNode(CreateSpotTrackerNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNode

CreateSpotTrackerNodeInfo - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors

CreateSpotTrackerNodeInfo(SpotTrackerFactory) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo

CreateStackAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

CreateStackAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.CreateStackAlgorithm

Instantiates a new node type.

CreateStackAlgorithm(CreateStackAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.CreateStackAlgorithm

Instantiates a new node type.

createStandardButton(String, ImageIcon, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils

createStarRatingLabel(String, double, int) - Static method in class org.hkijena.jipipe.utils.UIUtils

Creates a read-only "star-rating" label

createSubTempFilePath(Path, String, String) - Static method in class org.hkijena.jipipe.utils.PathUtils

Creates a path to a file that does not exist yet

createSuccessBorder() - Static method in class org.hkijena.jipipe.utils.UIUtils

createTags(Set<String>, Collection<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.omero.parameters.AnnotationsToOMEROTagExporter

createTempSubDirectory(Path) - Static method in class org.hkijena.jipipe.utils.PathUtils

Create a unique subdirectory rooted at the root path

createTempSubDirectory(Path, String) - Static method in class org.hkijena.jipipe.utils.PathUtils

Create a unique subdirectory rooted at the root path

createThresholder() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.ConstantSpotSegmentation3DAlgorithm

createThresholder() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.DifferenceSpotSegmentation3DAlgorithm

createThresholder() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.GaussianFitSpotSegmentation3DAlgorithm

createThresholder() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm

createThresholder() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm

createThumbnail(int, int, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.data.JIPipeData

This function generates a thumbnail for this data Can return null

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

createThumbnail(int, int, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeWeakDataReferenceData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.batchassistant.DataBatchStatusData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.clij2.datatypes.CLIJImageData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.dataypes.PathData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotsCollectionData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.ImageJ2DatasetData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorHSBData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorLABData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorHSBData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorLABData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorHSBData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorLABData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorHSBData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorLABData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorHSBData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorLABData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.LUTData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.OMEImageData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.StringData

createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

createTooltipWithShortcut(String, String, KeyStroke) - Static method in class org.hkijena.jipipe.utils.TooltipUtils

createTrackListener(JSlider) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernSliderUI

createTransferable(JComponent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodeTransferHandler

createTransferable(JComponent) - Method in class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplateBoxTransferHandler

createUI(JComponent) - Static method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopArrowLessScrollBarUI

createUI(JComponent) - Static method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

createUI(JComponent) - Static method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernSliderUI

createUI(JComponent) - Static method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernSpinnerUI

createUIForExportOperation(JIPipeWorkbench, ImageJDataExportOperation) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry

Generates a UI for the importer

createUIForImportOperation(JIPipeWorkbench, ImageJDataImportOperation) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry

Generates a UI for the importer

createUIInputSlotIconDescriptionMenuItems(String, List<ViewOnlyMenuItem>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm

createUIInputSlotIconDescriptionMenuItems(String, List<ViewOnlyMenuItem>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

createUIInputSlotIconDescriptionMenuItems(String, List<ViewOnlyMenuItem>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

createUIInputSlotIconDescriptionMenuItems(String, List<ViewOnlyMenuItem>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

createUIInputSlotIconDescriptionMenuItems(String, List<ViewOnlyMenuItem>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Explanations added to the slot menu Can be null

createUndoSnapshot() - Method in class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopTableEditor

Creates a new 'Undo' point

createURLLabel(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Makes a label that contains a URL and opens the URL when clicked

createValidationReport(JIPipeValidationReport) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorRunManager

createValidationReport(JIPipeValidationReport) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.actions.JIPipeDesktopCompartmentsGraphEditorRunManager

createValidationReport(JIPipeValidationReport) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.actions.JIPipeDesktopPipelineGraphEditorRunManager

createVerticalSeparator() - Static method in class org.hkijena.jipipe.utils.UIUtils

createWhiteMask(ImagePlus) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.ImageROITargetArea

createWhiteMaskProcessor(ImagePlus) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.ImageROITargetArea

createXLSXSheetName(String, Collection<String>) - Static method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Creates a valid XLSX sheet name from a string

createZoomedDummyCanvas(ImagePlus, Rectangle) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Creates a dummy canvas that contains the appropriate magnification settings

createZoomedDummyCanvas(ImagePlus, double) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Creates a dummy canvas that contains the appropriate magnification settings

crop(boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Sets node positions to make the top left to 0, 0

crop(boolean, boolean, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Moves the ROI, so the bounding rectangle is at 0,0

crop(ImagePlus, Rectangle, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Cropping that can handle negative X and Y

CropLabelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

CropLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.CropLabelsAlgorithm

CropLabelsAlgorithm(CropLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.CropLabelsAlgorithm

cropLegacy(ImagePlus, Rectangle, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Cropping as implemented in ImageJ.

CropRoiListAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Wrapper around RoiManager

CropRoiListAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm

Instantiates a new node type.

CropRoiListAlgorithm(CropRoiListAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm

CropToRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi

CropToRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

CropToRoiAlgorithm(CropToRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

CSS_RULES - Static variable in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopMarkdownReader

CSS_RULES_DARK - Static variable in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopMarkdownReader

CUDAUtils - Class in org.hkijena.jipipe.utils

CUDAUtils() - Constructor for class org.hkijena.jipipe.utils.CUDAUtils

CumulativeTransformArrayFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

CumulativeTransformArrayFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.CumulativeTransformArrayFunction

current() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.TokenIterator

CURRENT_PROJECT_FORMAT_VERSION - Static variable in class org.hkijena.jipipe.api.project.JIPipeProject

The current version of the project format.

currentToolAllowsConnectionDragging() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

currentToolAllowsNodeDragging() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

CustomAnalyzer - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util.measure

Copy of Analyzer that removes some of the GUI-dependent functions and also does not rely on static functions.

CustomAnalyzer() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

CustomAnalyzer(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Constructs a new Analyzer using the specified ImagePlus object and the current measurement options and default results table.

CustomAnalyzer(ImagePlus, ResultsTable) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Construct a new Analyzer using an ImagePlus object and a ResultsTable.

CustomAnalyzer(ImagePlus, int, ResultsTable) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Construct a new Analyzer using an ImagePlus object and private measurement options and a ResultsTable.

CustomAutoThreshold2D16UAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

Thresholding node that thresholds via an auto threshold

CustomAutoThreshold2D16UAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm

CustomAutoThreshold2D16UAlgorithm(CustomAutoThreshold2D16UAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm

Copies the algorithm

CustomAutoThreshold2D16UAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

CustomAutoThreshold2D16Uv2Algorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

Thresholding node that thresholds via an auto threshold

CustomAutoThreshold2D16Uv2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm

CustomAutoThreshold2D16Uv2Algorithm(CustomAutoThreshold2D16Uv2Algorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm

Copies the algorithm

CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

CustomAutoThreshold2D16Uv2Algorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

CustomAutoThreshold2D32FAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

Thresholding node that thresholds via an auto threshold

CustomAutoThreshold2D32FAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm

CustomAutoThreshold2D32FAlgorithm(CustomAutoThreshold2D32FAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm

Copies the algorithm

CustomAutoThreshold2D32FAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

CustomAutoThreshold2D32Fv2Algorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

Thresholding node that thresholds via an auto threshold

CustomAutoThreshold2D32Fv2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm

CustomAutoThreshold2D32Fv2Algorithm(CustomAutoThreshold2D32Fv2Algorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm

Copies the algorithm

CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

CustomAutoThreshold2D32Fv2Algorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

CustomAutoThreshold2D8UAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

Thresholding node that thresholds via an auto threshold

CustomAutoThreshold2D8UAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm

CustomAutoThreshold2D8UAlgorithm(CustomAutoThreshold2D8UAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm

Copies the algorithm

CustomAutoThreshold2D8UAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

CustomAutoThreshold2D8Uv2Algorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

Thresholding node that thresholds via an auto threshold

CustomAutoThreshold2D8Uv2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm

CustomAutoThreshold2D8Uv2Algorithm(CustomAutoThreshold2D8Uv2Algorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm

Copies the algorithm

CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

CustomAutoThreshold2D8Uv2Algorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

CustomBoxAndWhiskerRenderer - Class in org.hkijena.jipipe.plugins.plots.datatypes

A box-and-whisker renderer.

CustomBoxAndWhiskerRenderer() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Default constructor.

CustomColoc2<T extends net.imglib2.type.numeric.RealType<T> & net.imglib2.type.NativeType<T>> - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization

Customized version of Coloc_2 because many properties are protected

CustomColoc2(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.CustomColoc2

CustomColoc2.ColocResult<T extends net.imglib2.type.numeric.RealType<T> & net.imglib2.type.NativeType<T>> - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization

customColocalise(Img<T>, Img<T>, Coloc_2<T>.BoundingBox, Img<T>, List<ResultHandler<T>>) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.CustomColoc2

Call this method to run a whole colocalisation configuration, all selected algorithms get run on the supplied images.

customCopy(FormData, CustomValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.FormData

A custom copy function that copies the contents from source into this form.

customCopy(FormData, CustomValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.MaskDrawerFormData

customCopy(FormData, CustomValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.ROIDrawerFormData

CustomEditorPane - Class in org.hkijena.jipipe.utils

Version of the EditorPane that allows access to protected methods

CustomEditorPane() - Constructor for class org.hkijena.jipipe.utils.CustomEditorPane

customFilter(FHT, ImageProcessor) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTCustomFilter

CustomGradientThumbRenderer - Class in org.hkijena.jipipe.plugins.imageviewer.utils

CustomGradientThumbRenderer() - Constructor for class org.hkijena.jipipe.plugins.imageviewer.utils.CustomGradientThumbRenderer

CustomGradientTrackRenderer - Class in org.hkijena.jipipe.plugins.imageviewer.utils

A GradientTrackRenderer that handles the case start=end gracefully

CustomGradientTrackRenderer() - Constructor for class org.hkijena.jipipe.plugins.imageviewer.utils.CustomGradientTrackRenderer

customReset() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.FormData

A custom reset method

customReset() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.MaskDrawerFormData

customReset() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.ROIDrawerFormData

CustomSplitPaneUI() - Constructor for class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.CustomSplitPaneUI

CustomStateLessToggleButton - Class in org.hkijena.jipipe.utils

CustomStateLessToggleButton(String, Icon, String, Icon, boolean) - Constructor for class org.hkijena.jipipe.utils.CustomStateLessToggleButton

CustomStateLessToggleButton.ToggledEvent - Class in org.hkijena.jipipe.utils

CustomStateLessToggleButton.ToggledEventEmitter - Class in org.hkijena.jipipe.utils

CustomStateLessToggleButton.ToggledEventListener - Interface in org.hkijena.jipipe.utils

CustomValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts

CustomValidationReportContext(String, Icon) - Constructor for class org.hkijena.jipipe.api.validation.contexts.CustomValidationReportContext

CustomValidationReportContext(JIPipeValidationReportContext, String, Icon) - Constructor for class org.hkijena.jipipe.api.validation.contexts.CustomValidationReportContext

CustomValidationReportContext(String) - Constructor for class org.hkijena.jipipe.api.validation.contexts.CustomValidationReportContext

CustomValidationReportContext(JIPipeValidationReportContext, String) - Constructor for class org.hkijena.jipipe.api.validation.contexts.CustomValidationReportContext

CycleFinderAlgorithm - Enum in org.hkijena.jipipe.plugins.ijfilaments.parameters

D

DARK_GRAY - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

DARK_GRAY - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

DARK_THEME - Static variable in class org.hkijena.jipipe.utils.UIUtils

darkBlue - Variable in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

DATA_FLOW_WEIGHT_HEAVY - Static variable in class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph

DATA_FLOW_WEIGHT_INTERNAL - Static variable in class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph

DATA_FLOW_WEIGHT_LIGHT - Static variable in class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph

DataAnnotationQueryExpression - Class in org.hkijena.jipipe.plugins.expressions

An expression that is used to query annotations

DataAnnotationQueryExpression() - Constructor for class org.hkijena.jipipe.plugins.expressions.DataAnnotationQueryExpression

DataAnnotationQueryExpression(String) - Constructor for class org.hkijena.jipipe.plugins.expressions.DataAnnotationQueryExpression

DataAnnotationQueryExpression(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.plugins.expressions.DataAnnotationQueryExpression

DataAnnotationQueryExpressionVariablesInfo - Class in org.hkijena.jipipe.plugins.expressions

DataAnnotationQueryExpressionVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.expressions.DataAnnotationQueryExpressionVariablesInfo

DataAnnotationToStringAnnotation - Class in org.hkijena.jipipe.plugins.annotation.algorithms

DataAnnotationToStringAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.DataAnnotationToStringAnnotation

DataAnnotationToStringAnnotation(DataAnnotationToStringAnnotation) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.DataAnnotationToStringAnnotation

DataBatchStatus - Enum in org.hkijena.jipipe.plugins.forms.ui

DataBatchStatusData - Class in org.hkijena.jipipe.plugins.batchassistant

DataBatchStatusData() - Constructor for class org.hkijena.jipipe.plugins.batchassistant.DataBatchStatusData

DataBatchStatusData(DataBatchStatusData) - Constructor for class org.hkijena.jipipe.plugins.batchassistant.DataBatchStatusData

DataBatchStatusTableCellRenderer - Class in org.hkijena.jipipe.plugins.forms.ui

DataBatchStatusTableCellRenderer(List<DataBatchStatus>) - Constructor for class org.hkijena.jipipe.plugins.forms.ui.DataBatchStatusTableCellRenderer

DataConverterEdge() - Constructor for class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry.DataConverterEdge

DataDirectoriesPlugin - Class in org.hkijena.jipipe.plugins.dataenvironment

DataDirectoriesPlugin() - Constructor for class org.hkijena.jipipe.plugins.dataenvironment.DataDirectoriesPlugin

DataExportExpressionParameter - Class in org.hkijena.jipipe.plugins.expressions

An expression parameter designed for data export

DataExportExpressionParameter() - Constructor for class org.hkijena.jipipe.plugins.expressions.DataExportExpressionParameter

DataExportExpressionParameter(String) - Constructor for class org.hkijena.jipipe.plugins.expressions.DataExportExpressionParameter

DataExportExpressionParameter(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.plugins.expressions.DataExportExpressionParameter

DataExportExpressionParameterEditorUI - Class in org.hkijena.jipipe.plugins.expressions

DataExportExpressionParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.expressions.DataExportExpressionParameterEditorUI

dataInfos - Variable in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDataTypeCompendiumUI

DataRowQueryExpression - Class in org.hkijena.jipipe.plugins.expressions

Expression for selecting rows inside a data table

DataRowQueryExpression() - Constructor for class org.hkijena.jipipe.plugins.expressions.DataRowQueryExpression

DataRowQueryExpression(String) - Constructor for class org.hkijena.jipipe.plugins.expressions.DataRowQueryExpression

DataRowQueryExpression(DataRowQueryExpression) - Constructor for class org.hkijena.jipipe.plugins.expressions.DataRowQueryExpression

DataRowQueryExpression.VariablesInfo - Class in org.hkijena.jipipe.plugins.expressions

DatasetDescription - Class in org.hkijena.jipipe.plugins.ilastik.utils.hdf5

DatasetDescription(String, DatasetType, long[], List<AxisType>, boolean) - Constructor for class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetDescription

DatasetEntry(String, int, String, String) - Constructor for class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetEntryProvider.DatasetEntry

DatasetEntryProvider - Interface in org.hkijena.jipipe.plugins.ilastik.utils.hdf5

DatasetEntryProvider.DatasetEntry - Class in org.hkijena.jipipe.plugins.ilastik.utils.hdf5

DatasetEntryProvider.ReadException - Exception in org.hkijena.jipipe.plugins.ilastik.utils.hdf5

DatasetEnumItemInfo() - Constructor for class org.hkijena.jipipe.plugins.r.algorithms.ImportRDatasetAlgorithm.DatasetEnumItemInfo

DatasetImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.data.input

Handling of Dataset It is assumed that these refer to images (conversion to ImageJ2DatasetData)

DatasetImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.data.input.DatasetImageJ2ModuleInput

DatasetImageJ2ModuleOutput - Class in org.hkijena.jipipe.plugins.imagej2.io.data.output

Handling of Dataset It is assumed that these refer to images (conversion to ImageJ2DatasetData)

DatasetImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.data.output.DatasetImageJ2ModuleOutput

datasets(File) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.Hdf5

Return descriptions of supported datasets in an HDF5 file, sorted by their paths.

DatasetType - Enum in org.hkijena.jipipe.plugins.ilastik.utils.hdf5

datasetTypeToBitDepth(DatasetType) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.IJ1Hdf5

DataSlicer - Class in org.hkijena.jipipe.plugins.utils.algorithms

DataSlicer(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.DataSlicer

DataSlicer(DataSlicer) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.DataSlicer

DataSlotModuleInput<ModuleDataType,JIPipeDataType extends JIPipeData> - Class in org.hkijena.jipipe.plugins.imagej2.io.data.input

DataSlotModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.data.input.DataSlotModuleInput

DataSlotModuleIO - Interface in org.hkijena.jipipe.plugins.imagej2.io.data

DataSlotModuleOutput<ModuleDataType,JIPipeDataType extends JIPipeData> - Class in org.hkijena.jipipe.plugins.imagej2.io.data.output

DataSlotModuleOutput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.data.output.DataSlotModuleOutput

DataSourceNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories

DataSourceNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory

DataTableImageJDataExporter - Class in org.hkijena.jipipe.api.compat

The fallback/default data adapter that can handle any data type.

DataTableImageJDataExporter() - Constructor for class org.hkijena.jipipe.api.compat.DataTableImageJDataExporter

DataTableImageJDataImporter - Class in org.hkijena.jipipe.api.compat

The fallback/default data adapter that can handle any data type.

DataTableImageJDataImporter() - Constructor for class org.hkijena.jipipe.api.compat.DataTableImageJDataImporter

DataToPreviewAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc

DataToPreviewAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc.DataToPreviewAlgorithm

DataToPreviewAlgorithm(DataToPreviewAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc.DataToPreviewAlgorithm

DataTypeDeselectedEvent(JIPipeDesktopDataTypePicker, JIPipeDataInfo) - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.DataTypeDeselectedEvent

DataTypeDeselectedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.DataTypeDeselectedEventEmitter

dataTypeDistance(Class<? extends JIPipeData>, Class<? extends JIPipeData>) - Static method in class org.hkijena.jipipe.api.nodes.database.JIPipeLegacyNodeDatabaseSearch

DatatypeRegisteredEvent(JIPipe, String) - Constructor for class org.hkijena.jipipe.JIPipeService.DatatypeRegisteredEvent

DatatypeRegisteredEventEmitter() - Constructor for class org.hkijena.jipipe.JIPipeService.DatatypeRegisteredEventEmitter

DataTypeSelectedEvent(JIPipeDesktopDataTypePicker, JIPipeDataInfo) - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.DataTypeSelectedEvent

DataTypeSelectedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.DataTypeSelectedEventEmitter

DBSCANClusteringAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.statistics

DBSCANClusteringAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm

DBSCANClusteringAlgorithm(DBSCANClusteringAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm

DBSCANClusteringAlgorithm.ClusteringSettings - Class in org.hkijena.jipipe.plugins.tables.nodes.statistics

DBSCANClusteringAlgorithm.OutputSettings - Class in org.hkijena.jipipe.plugins.tables.nodes.statistics

deactivate() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

deactivate() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

deactivate() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

deactivate() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

deactivate() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeToggleableGraphEditorTool

deactivate() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

deactivatePanel(JIPipeDesktopDockPanel.Panel, boolean) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

deactivatePanels(JIPipeDesktopDockPanel.PanelLocation, boolean) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

Deactivates all panels at a given location

debounce(T, Consumer<T>) - Method in class org.hkijena.jipipe.utils.debounce.ConsumingDynamicDebouncer

debounce(Runnable) - Method in class org.hkijena.jipipe.utils.debounce.DynamicDebouncer

debounce() - Method in class org.hkijena.jipipe.utils.debounce.StaticDebouncer

debug(Object, String) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROToJIPipeLogger

debug(Object, LogMessage) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROToJIPipeLogger

DECIMAL_FORMAT_FLOAT - Static variable in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl

DECIMAL_FORMAT_INT - Static variable in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl

decomposePixel(int, int[]) - Method in interface org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.ColorSpace

Decomposes an integer pixel value into its channel values

decomposePixel(int, int[]) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.GreyscaleColorSpace

decomposePixel(int, int[]) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.HSBColorSpace

decomposePixel(int, int[]) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.IgnoreColorSpace

decomposePixel(int, int[]) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.LABColorSpace

decomposePixel(int, int[]) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.RGBColorSpace

decompressArchiveEntry(Path, Path) - Static method in class org.hkijena.jipipe.utils.ArchiveUtils

Returns the contents of the specified entry inside an archive (ZIP or tar.gz) as a byte array, or null if the entry is not found.

decompressTarGZ(Path, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.ArchiveUtils

decompressZipFile(Path, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.ArchiveUtils

Unzips a file

deduplicateSliceMappingByOverwriting(Map<ImageProcessor, ImageSliceIndex>, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

deepCopy(byte[][]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils

deepCopy(short[][]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils

deepCopy(int[][]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils

deepCopy(long[][]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils

deepCopy(float[][]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils

deepCopy(double[][]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils

deepCopyObject(Object) - Static method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

Deep-copies an object.

DEFAULT_AXES - Static variable in class org.hkijena.jipipe.plugins.ilastik.utils.ImgUtils

Supported ImageJ axes in the default order.

DEFAULT_BORDER - Static variable in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon

DEFAULT_DIALOG_FLAGS - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

Flags suitable for standalone dialogs

DEFAULT_PLUGINS - Static variable in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

DEFAULT_SETTING_CLOSE - Static variable in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PolygonMaskDrawer2DTool

DEFAULT_SETTING_FILL - Static variable in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.EllipseMaskDrawer2DTool

DEFAULT_SETTING_FILL - Static variable in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PolygonMaskDrawer2DTool

DEFAULT_SETTING_FILL - Static variable in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.RectangleMaskDrawer2DTool

DEFAULT_SETTING_PENCIL_LINK_Y - Static variable in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PencilMaskDrawer2DTool

DEFAULT_SETTING_PENCIL_SIZE_X - Static variable in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PencilMaskDrawer2DTool

DEFAULT_SETTING_PENCIL_SIZE_Y - Static variable in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PencilMaskDrawer2DTool

DEFAULT_SETTING_SQUARE - Static variable in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.EllipseMaskDrawer2DTool

DEFAULT_SETTING_SQUARE - Static variable in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.RectangleMaskDrawer2DTool

DEFAULT_SETTING_START_FROM_CENTER - Static variable in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.EllipseMaskDrawer2DTool

DEFAULT_SETTING_START_FROM_CENTER - Static variable in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.RectangleMaskDrawer2DTool

DEFAULT_STRING_AXES - Static variable in class org.hkijena.jipipe.plugins.ilastik.utils.ImgUtils

Supported axes in the character format, in the same order as ImgUtils.DEFAULT_AXES.

DEFAULT_VALUES - Static variable in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

DefaultAddJIPipeInputSlot - Class in org.hkijena.jipipe.api.nodes

Default implementation of AddJIPipeInputSlot

DefaultAddJIPipeInputSlot(Class<? extends JIPipeData>, String, String, boolean, boolean, JIPipeDataSlotRole) - Constructor for class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeInputSlot

DefaultAddJIPipeOutputSlot - Class in org.hkijena.jipipe.api.nodes

Default implementation of AddJIPipeOutputSlot

DefaultAddJIPipeOutputSlot(Class<? extends JIPipeData>, String, String, String, boolean, JIPipeDataSlotRole) - Constructor for class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeOutputSlot

DefaultDataDisplayOperation - Class in org.hkijena.jipipe.plugins.core.data

DefaultDataDisplayOperation() - Constructor for class org.hkijena.jipipe.plugins.core.data.DefaultDataDisplayOperation

DefaultEnumItemInfo - Class in org.hkijena.jipipe.plugins.parameters.api.enums

Default implementation of EnumItemInfo

DefaultEnumItemInfo() - Constructor for class org.hkijena.jipipe.plugins.parameters.api.enums.DefaultEnumItemInfo

DefaultImageJ2JIPipeModuleIOService - Class in org.hkijena.jipipe.plugins.imagej2.io

DefaultImageJ2JIPipeModuleIOService() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.DefaultImageJ2JIPipeModuleIOService

DefaultImageJDataExporterUI - Class in org.hkijena.jipipe.api.compat

Default implementation of an ImageJ data exporter UI

DefaultImageJDataExporterUI(JIPipeDesktopWorkbench, ImageJDataExportOperation) - Constructor for class org.hkijena.jipipe.api.compat.DefaultImageJDataExporterUI

DefaultImageJDataImporterUI - Class in org.hkijena.jipipe.api.compat

Default implementation of an ImageJ data importer UI

DefaultImageJDataImporterUI(JIPipeDesktopWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.api.compat.DefaultImageJDataImporterUI

DefaultJIPipeParameterGenerator - Class in org.hkijena.jipipe.api.parameters

A default implementation of JIPipeParameterGenerator that shows all parameters of this JIPipeParameterCollection in a dialog before generating the data.

DefaultJIPipeParameterGenerator() - Constructor for class org.hkijena.jipipe.api.parameters.DefaultJIPipeParameterGenerator

DefaultNodeUIActionRequestedEvent(JIPipeDesktopGraphNodeUI) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI.DefaultNodeUIActionRequestedEvent

DefaultNodeUIActionRequestedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI.DefaultNodeUIActionRequestedEventEmitter

DefaultSettingsIO - Class in org.hkijena.jipipe.plugins.ijtrackmate.io

DefaultSettingsIO(Class<?>) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.io.DefaultSettingsIO

DefaultTrackBackground - Class in org.hkijena.jipipe.plugins.parameters.library.ranges

DefaultTrackBackground() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.ranges.DefaultTrackBackground

DefaultValuesVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm.DefaultValuesVariablesInfo

DefineParametersAlgorithm - Class in org.hkijena.jipipe.plugins.multiparameters.nodes

Generates ParametersData objects

DefineParametersAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersAlgorithm

Creates a new instance

DefineParametersAlgorithm(DefineParametersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersAlgorithm

Copies the algorithm

DefineParametersFromGlobalParametersAlgorithm - Class in org.hkijena.jipipe.plugins.multiparameters.nodes

Generates ParametersData objects

DefineParametersFromGlobalParametersAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromGlobalParametersAlgorithm

DefineParametersFromGlobalParametersAlgorithm(DefineParametersFromGlobalParametersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromGlobalParametersAlgorithm

DefineParametersFromTableAlgorithm - Class in org.hkijena.jipipe.plugins.multiparameters.nodes

DefineParametersFromTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromTableAlgorithm

DefineParametersFromTableAlgorithm(DefineParametersFromTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromTableAlgorithm

DefineParametersFromTableAlgorithm.Column - Class in org.hkijena.jipipe.plugins.multiparameters.nodes

DefineParametersTableAlgorithm - Class in org.hkijena.jipipe.plugins.multiparameters.nodes

Generates ParametersData objects

DefineParametersTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersTableAlgorithm

Creates a new instance

DefineParametersTableAlgorithm(DefineParametersTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersTableAlgorithm

Creates a copy

DefineRectangularRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate

Deprecated.

DefineRectangularRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.DefineRectangularRoiAlgorithm

Deprecated.

Instantiates a new node type.

DefineRectangularRoiAlgorithm(DefineRectangularRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.DefineRectangularRoiAlgorithm

Deprecated.

Instantiates a new node type.

DefineTablesAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes

Algorithm that annotates all data with the same annotation

DefineTablesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.DefineTablesAlgorithm

DefineTablesAlgorithm(DefineTablesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.DefineTablesAlgorithm

Copies the algorithm

DefineUserFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.functions

DefineUserFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.functions.DefineUserFunction

DegreeToRadiansColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a abs(x) function

DegreeToRadiansColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.DegreeToRadiansColumnOperation

DeleteCompartmentUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

DeleteCompartmentUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DeleteCompartmentUIContextAction

deleteDirectoryRecursively(Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.PathUtils

deleteIfExists(Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.PathUtils

DeleteNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

DeleteNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DeleteNodeUIContextAction

DeleteOldBackupsRun - Class in org.hkijena.jipipe.api.backups

DeleteOldBackupsRun(Duration) - Constructor for class org.hkijena.jipipe.api.backups.DeleteOldBackupsRun

DerivativesFeaturesAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

DerivativesFeaturesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DerivativesFeaturesAlgorithm

DerivativesFeaturesAlgorithm(DerivativesFeaturesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DerivativesFeaturesAlgorithm

description() - Method in class org.hkijena.jipipe.api.JIPipeDocumentation

description() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeInputSlot

description() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeOutputSlot

descriptionResourceClass() - Method in class org.hkijena.jipipe.api.JIPipeDocumentation

descriptionResourceURL() - Method in class org.hkijena.jipipe.api.JIPipeDocumentation

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.api.project.JIPipeProject.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameter.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.expressions.OptionalJIPipeExpressionParameter.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDataDeserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.EdgeFeature.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeature.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeature.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.WekaClassifierParameter.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersData.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameter.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameter.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameter.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.library.auth.PasswordParameter.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.library.collections.ParameterCollectionList.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.library.colors.ColorDeserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.library.images.ImageParameter.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicCategoryEnumParameter.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLText.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.DynamicStringEnumParameter.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.FontFamilyParameter.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.IconRef.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExporterRef.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImporterRef.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRef.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeNodeInfoRef.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeParameterTypeInfoRef.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.RectangleDeserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotDataSeries.Deserializer

deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.Deserializer

deserializeFromJsonNode(JsonNode) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

Deserializes the information from given JSON node

deserializeKey(String, DeserializationContext) - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo.KeyDeserializer

deserializeParametersFromJson(JIPipeParameterCollection, JsonNode, JIPipeValidationReportContext, JIPipeValidationReport) - Static method in class org.hkijena.jipipe.utils.ParameterUtils

Deserializes parameters from JSON

Deserializer() - Constructor for class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataInfo.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.api.project.JIPipeProject.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.JIPipeJsonPlugin.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameter.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.expressions.OptionalJIPipeExpressionParameter.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.EdgeFeature.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeature.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeature.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.WekaClassifierParameter.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersData.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameter.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameter.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameter.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.auth.PasswordParameter.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.collections.ParameterCollectionList.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.images.ImageParameter.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicCategoryEnumParameter.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLText.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.DynamicStringEnumParameter.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.FontFamilyParameter.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.IconRef.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExporterRef.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImporterRef.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRef.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeNodeInfoRef.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeParameterTypeInfoRef.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotDataSeries.Deserializer

Deserializer() - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.Deserializer

DesktopParameterCollectionListEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.collections

Generic parameter for ListParameter

DesktopParameterCollectionListEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.collections.DesktopParameterCollectionListEditorUI

DesktopParameterTableEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.table

UI for ParameterTable

DesktopParameterTableEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.table.DesktopParameterTableEditorUI

DespeckleFilter2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise

Wrapper around RankFilters

DespeckleFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.DespeckleFilter2DAlgorithm

Instantiates a new node type.

DespeckleFilter2DAlgorithm(DespeckleFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.DespeckleFilter2DAlgorithm

Instantiates a new node type.

destroy() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree

destroyData() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Closes all data and data annotations and replaces their values in the table by null.

detachProgress() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

Creates a sub-progress that detaches the references to the global process counters.

detachTab(JComponent, JIPipeDesktopTabPane.DocumentTab, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Detaches a tab

DevelopmentPlugin - Class in org.hkijena.jipipe.plugins.dev

Extension containing some additional tools

DevelopmentPlugin() - Constructor for class org.hkijena.jipipe.plugins.dev.DevelopmentPlugin

DiamondImageJ2ShapeData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.shapes

DiamondImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.DiamondImageJ2ShapeData

DiamondImageJ2ShapeData(DiamondImageJ2ShapeData) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.DiamondImageJ2ShapeData

DiamondImageJ2ShapeData(DiamondShape) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.DiamondImageJ2ShapeData

DiamondTipsImageJ2ShapeData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.shapes

DiamondTipsImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.DiamondTipsImageJ2ShapeData

DiamondTipsImageJ2ShapeData(DiamondTipsImageJ2ShapeData) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.DiamondTipsImageJ2ShapeData

DiamondTipsImageJ2ShapeData(DiamondTipsShape) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.DiamondTipsImageJ2ShapeData

DifferenceOfGaussian2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

Wrapper around GaussianBlur

DifferenceOfGaussian2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm

Instantiates a new node type.

DifferenceOfGaussian2DAlgorithm(DifferenceOfGaussian2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm

DifferenceSpotSegmentation3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.segmentation

DifferenceSpotSegmentation3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.DifferenceSpotSegmentation3DAlgorithm

DifferenceSpotSegmentation3DAlgorithm(DifferenceSpotSegmentation3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.DifferenceSpotSegmentation3DAlgorithm

DilateLabelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

DilateLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.DilateLabelsAlgorithm

DilateLabelsAlgorithm(DilateLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.DilateLabelsAlgorithm

dims - Variable in class org.hkijena.jipipe.plugins.ilastik.utils.GridCoordinates.Block

dims - Variable in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetDescription

Dataset dimensions in the column-major order.

DirectionalFilter2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

DirectionalFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm

DirectionalFilter2DAlgorithm(DirectionalFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm

DirectoryEntry() - Constructor for class org.hkijena.jipipe.api.project.JIPipeProjectDirectories.DirectoryEntry

DirectoryEntry(JIPipeProjectDirectories.DirectoryEntry) - Constructor for class org.hkijena.jipipe.api.project.JIPipeProjectDirectories.DirectoryEntry

DisableNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

DisableNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableNodeUIContextAction

disableOnNonMatch() - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeUIContextAction

Determines if an item should be disabled or removed if it does not match

disableOnNonMatch() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheNodeUIContextAction

disableOnNonMatch() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheOnlyPredecessorsNodeUIContextAction

disableOnNonMatch() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheShowIntermediateNodeUIContextAction

disableOnNonMatch() - Method in class org.hkijena.jipipe.plugins.nodeexamples.LoadExampleContextMenuAction

DisablePassThroughNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

DisablePassThroughNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisablePassThroughNodeUIContextAction

disableReset(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Used by RoiManager.multiMeasure() to suppress save as dialogs.

DisableSaveOutputsNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

DisableSaveOutputsNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableSaveOutputsNodeUIContextAction

DisableVirtualOutputNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

DisableVirtualOutputNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableVirtualOutputNodeUIContextAction

disassemble(Path) - Static method in class org.hkijena.jipipe.utils.PathUtils

disconnect(JIPipeDataSlot, JIPipeDataSlot, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Disconnects an input and an output slot

disconnect(JIPipeGraphConnection, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

disconnect(JIPipeGraphConnection) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

disconnectAll(JIPipeDataSlot, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Completely disconnects a slot

disconnectAll(JIPipeDataSlot, Set<JIPipeDataSlot>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

DisconnectHighlight(JIPipeDesktopGraphNodeUISlotActiveArea, Set<JIPipeDataSlot>) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisconnectHighlight

disconnectSlot(JIPipeDataSlot, JIPipeDataSlot) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Disconnects two slots

dismiss() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification

dismiss(JIPipeNotification) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox

dismiss(String) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox

dismissAll() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox

DismissedEvent(JIPipeNotificationInbox, JIPipeNotification) - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.DismissedEvent

DismissedEventEmitter() - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.DismissedEventEmitter

dismissNewPlugins() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

display(JIPipeData, String, JIPipeDesktopWorkbench, JIPipeDataSource) - Method in interface org.hkijena.jipipe.desktop.api.data.JIPipeDesktopDataDisplayOperation

Shows the data in the UI

display(JIPipeDataTable, int, JIPipeDesktopWorkbench, boolean) - Method in interface org.hkijena.jipipe.desktop.api.data.JIPipeDesktopDataDisplayOperation

Applies the operation on a data table

display(JIPipeData, String, JIPipeDesktopWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.plugins.core.data.DefaultDataDisplayOperation

display(JIPipeData, String, JIPipeDesktopWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.plugins.filesystem.resultanalysis.CopyPathDataDisplayOperation

display(JIPipeData, String, JIPipeDesktopWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.plugins.filesystem.resultanalysis.OpenPathDataDisplayOperation

display(JIPipeData, String, JIPipeDesktopWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.plugins.ij3d.display.AddROI3DToManagerDataDisplayOperation

display(JIPipeData, String, JIPipeDesktopWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.trackscheme.ShowTrackSchemeDataDisplayOperation

display(JIPipeData, String, JIPipeDesktopWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.AddToROIManagerDataDisplayOperation

display(JIPipeData, String, JIPipeDesktopWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInImageJ3DViewerDataDisplayOperation

display(JIPipeData, String, JIPipeDesktopWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInImageJDataDisplayOperation

display(JIPipeData, String, JIPipeDesktopWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInNapariDataDisplayOperation

display(JIPipeData, String, JIPipeDesktopWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImportImageJPathDataDisplayOperation

display(JIPipeData, String, JIPipeDesktopWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.plugins.plots.ui.resultanalysis.OpenPlotInJIPipeDataDisplayOperation

display(JIPipeData, String, JIPipeDesktopWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.plugins.tables.display.CacheAwareOpenResultsTableInJIPipeDataDisplayOperation

display(JIPipeData, String, JIPipeDesktopWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.plugins.tables.display.OpenResultsTableInImageJDataDisplayOperation

display(JIPipeData, String, JIPipeDesktopWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.plugins.tables.display.OpenResultsTableInJIPipeTabDataDisplayOperation

display(JIPipeData, String, JIPipeDesktopWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.plugins.utils.display.ImportJIPipeProjectDataDisplayOperation

displayAnnotations(JIPipeDataTableDataSource) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataViewerAnnotationInfoPanel

displayDataAnnotation(JIPipeDataTable, int, JIPipeDataAnnotation, JIPipeDesktopWorkbench) - Method in interface org.hkijena.jipipe.desktop.api.data.JIPipeDesktopDataDisplayOperation

Applies the operation on a data table

DisplayedSlotEdge(JIPipeDataSlot, JIPipeDataSlot, JIPipeGraphEdge) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

displayErrors(Throwable) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopUserFriendlyErrorUI

Adds an exception to the display.

displayErrors(JIPipeValidationReport) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopUserFriendlyErrorUI

Adds a report to the display Does not add the necessary vertical glue.

DisplayRange - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

Stores information about the calibration of an image

DisplayRange() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.DisplayRange

DisplayRange(double, double) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.DisplayRange

DisplayRangeCalibrationAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms

DisplayRangeCalibrationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm

DisplayRangeCalibrationAlgorithm(DisplayRangeCalibrationAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm

dispose() - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter

dispose() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewer

dispose() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow

dispose() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

dispose() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataDisplayCacheControl

dispose() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

dispose() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableUI

dispose() - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerNodeOutputUI

dispose() - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerUI

dispose() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

dispose() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

dispose() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.groups.JIPipeDesktopNodeGroupUI

dispose() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

dispose() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

dispose() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

dispose() - Method in class org.hkijena.jipipe.plugins.forms.ui.FormsDialog

dispose() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

dispose() - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

dispose() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ImagePlusDataViewer

dispose() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

dispose() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

dispose() - Method in class org.hkijena.jipipe.plugins.tables.display.TableViewerLegacyCacheDataViewerWindow

dispose() - Method in class org.hkijena.jipipe.utils.debounce.ConsumingDynamicDebouncer

dispose() - Method in class org.hkijena.jipipe.utils.debounce.DynamicDebouncer

DissolveCompartmentsTool - Class in org.hkijena.jipipe.plugins.tools

DissolveCompartmentsTool(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.tools.DissolveCompartmentsTool

Creates a new instance

DistanceMap3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.binary

DistanceMap3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.binary.DistanceMap3DAlgorithm

DistanceMap3DAlgorithm(DistanceMap3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.binary.DistanceMap3DAlgorithm

DistanceMeasures - Enum in org.hkijena.jipipe.plugins.tables.nodes.statistics

distanceTo(Point3d) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.Point3d

Calculates the distances between two locations Accounts for negative Z/C/T locations (location everywhere)

DistanceTransformWatershed2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary

Wrapper around EDM

DistanceTransformWatershed2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.DistanceTransformWatershed2DAlgorithm

Instantiates a new node type.

DistanceTransformWatershed2DAlgorithm(DistanceTransformWatershed2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.DistanceTransformWatershed2DAlgorithm

Instantiates a new node type.

DistributeDataRandomlyByCountAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms.distribute

DistributeDataRandomlyByCountAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.distribute.DistributeDataRandomlyByCountAlgorithm

DistributeDataRandomlyByCountAlgorithm(DistributeDataRandomlyByCountAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.distribute.DistributeDataRandomlyByCountAlgorithm

DistributeDataRandomlyByPercentageAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms.distribute

DistributeDataRandomlyByPercentageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.distribute.DistributeDataRandomlyByPercentageAlgorithm

DistributeDataRandomlyByPercentageAlgorithm(DistributeDataRandomlyByPercentageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.distribute.DistributeDataRandomlyByPercentageAlgorithm

DivideByMaximumAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Wrapper around ImageProcessor

DivideByMaximumAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.DivideByMaximumAlgorithm

Instantiates a new node type.

DivideByMaximumAlgorithm(DivideByMaximumAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.DivideByMaximumAlgorithm

Instantiates a new node type.

doBatchFinalTransform(float[]) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformer

Compute the final image.

doCallbackConfirm() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNext

doCallbackConfirmIfValid() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNext

DOCK_ADD_NODES - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.JIPipeDesktopCompartmentsGraphEditorUI

DOCK_ADD_NODES - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.JIPipeDesktopPipelineGraphEditorUI

DOCK_BOOKMARKS - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

DOCK_CALCULATOR - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

DOCK_ERRORS - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

DOCK_HISTORY - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

DOCK_LOG - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

DOCK_MAP - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

DOCK_NODE_CONTEXT_HELP - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.JIPipeDesktopCompartmentsGraphEditorUI

DOCK_NODE_CONTEXT_HELP - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.JIPipeDesktopPipelineGraphEditorUI

DOCK_NODE_CONTEXT_INPUT_MANAGER - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.JIPipeDesktopPipelineGraphEditorUI

DOCK_NODE_CONTEXT_PARAMETERS - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.JIPipeDesktopCompartmentsGraphEditorUI

DOCK_NODE_CONTEXT_PARAMETERS - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.JIPipeDesktopPipelineGraphEditorUI

DOCK_NODE_CONTEXT_RESULTS - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.JIPipeDesktopCompartmentsGraphEditorUI

DOCK_NODE_CONTEXT_RESULTS - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.JIPipeDesktopPipelineGraphEditorUI

DOCK_NODE_CONTEXT_SLOT_MANAGER - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.JIPipeDesktopCompartmentsGraphEditorUI

DOCK_NODE_CONTEXT_SLOT_MANAGER - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.JIPipeDesktopPipelineGraphEditorUI

DOCK_NODE_TEMPLATES - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.JIPipeDesktopPipelineGraphEditorUI

DOCK_PANEL_PREFIX - Static variable in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

DOCK_QUICK_GUIDE - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.JIPipeDesktopCompartmentsGraphEditorUI

DOCK_QUICK_GUIDE - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.JIPipeDesktopPipelineGraphEditorUI

DockLayoutSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.DockLayoutSettings

DOCUMENTATION_BELOW - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Flag that indicates that documentation should be shown below if enabled.

DOCUMENTATION_EXTERNAL - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Flag that makes the documentation panel not appear in the split pane

DOCUMENTATION_NO_UI - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Flag that indicates that documentation should be supported, but there should be no dedicated panel

DocumentationUtils - Class in org.hkijena.jipipe.utils

DocumentationUtils() - Constructor for class org.hkijena.jipipe.utils.DocumentationUtils

DocumentTabComponent(JIPipeDesktopTabPane, Icon) - Constructor for class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.DocumentTabComponent

documentTabPane - Variable in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

doFinalTransform(int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformer

Compute the final image.

doFinalTransform(TurboRegImage, TurboRegPointHandler, TurboRegImage, TurboRegPointHandler, TurboRegTransformationType, boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformer

Compute the final image.

doInBackground() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableWorker

doInBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Hough_Circle

doInverseTransform(FHT, ImageProcessor, Rectangle, int) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTCustomFilter

done() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableWorker

doOperation(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryApplyInstallUninstallRun

doOperation(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryInstallArtifactRun

doOperation(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryInstallManuallyRun

doOperation(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryOperationRun

doOperation(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryUninstallArtifactRun

doOperation(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryUpdateCachedArtifactsRun

doRegistration() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformer

Refine the landmarks.

doRunPipeline(List<String>) - Static method in class org.hkijena.jipipe.cli.JIPipeCLIPipelineRun

DotSlideshow - Class in org.hkijena.jipipe.utils.ui

DotSlideshow() - Constructor for class org.hkijena.jipipe.utils.ui.DotSlideshow

DoubleAndDoublePairParameter - Class in org.hkijena.jipipe.plugins.parameters.library.pairs

A parameter that renames an integer into another integer

DoubleAndDoublePairParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.DoubleAndDoublePairParameter

Creates a new instance

DoubleAndDoublePairParameter(DoubleAndDoublePairParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.DoubleAndDoublePairParameter

Creates a copy

DoubleAndDoublePairParameter.List - Class in org.hkijena.jipipe.plugins.parameters.library.pairs

A collection of multiple DoubleAndDoublePairParameter

DoubleArrayColumnToTableConverter - Class in org.hkijena.jipipe.plugins.tables

Converts a column to a table

DoubleArrayColumnToTableConverter() - Constructor for class org.hkijena.jipipe.plugins.tables.DoubleArrayColumnToTableConverter

DoubleArrayParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays

DoubleArrayParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.DoubleArrayParameterImageJ2ModuleInput

DoubleArrayTableColumnData - Class in org.hkijena.jipipe.plugins.tables.datatypes

TableColumnData that contains doubles.

DoubleArrayTableColumnData(double[], String) - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.DoubleArrayTableColumnData

Creates a new instance

DoubleConstantValueImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant

DoubleConstantValueImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.DoubleConstantValueImageJ2OutOfBoundsFactoryData

DoubleConstantValueImageJ2OutOfBoundsFactoryData(OutOfBoundsConstantValueFactory<?, ?>) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.DoubleConstantValueImageJ2OutOfBoundsFactoryData

DoubleConstantValueImageJ2OutOfBoundsFactoryData(DoubleConstantValueImageJ2OutOfBoundsFactoryData) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.DoubleConstantValueImageJ2OutOfBoundsFactoryData

DoubleFormData - Class in org.hkijena.jipipe.plugins.forms.datatypes

DoubleFormData() - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.DoubleFormData

DoubleFormData(DoubleFormData) - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.DoubleFormData

DoubleFormGeneratorAlgorithm - Class in org.hkijena.jipipe.plugins.forms.algorithms.generators

DoubleFormGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.generators.DoubleFormGeneratorAlgorithm

DoubleFormGeneratorAlgorithm(DoubleFormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.generators.DoubleFormGeneratorAlgorithm

doubleHeight - Variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines

DoubleList - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.list

A list of Double

DoubleList() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.list.DoubleList

Creates a new empty list

DoubleList(DoubleList) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.list.DoubleList

Creates a copy

DoubleParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives

DoubleParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.DoubleParameterImageJ2ModuleInput

DoubleParameterImageJ2ModuleOutput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives

DoubleParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.DoubleParameterImageJ2ModuleOutput

DoubleParameterTypeInfo - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Info for Double

DoubleParameterTypeInfo() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.DoubleParameterTypeInfo

DoublePrimitiveParameterTypeInfo - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Info for Double

DoublePrimitiveParameterTypeInfo() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.DoublePrimitiveParameterTypeInfo

DoubleToStringFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.math

DoubleToStringFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.math.DoubleToStringFunction

download(URL, Path, String, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.WebUtils

DownloadEnvironment() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeDownloadsApplicationSettings.DownloadEnvironment

DownloadEnvironment(ProcessEnvironment) - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeDownloadsApplicationSettings.DownloadEnvironment

DownloadFilesDataSource - Class in org.hkijena.jipipe.plugins.filesystem.datasources

DownloadFilesDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.DownloadFilesDataSource

DownloadFilesDataSource(DownloadFilesDataSource) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.DownloadFilesDataSource

DownloadFullDataRun(JIPipeDataBrowser, int, int) - Constructor for class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow.DownloadFullDataRun

downloadNative(URL, Path, String, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.WebUtils

The native download method written in Java

DownloadOMEROImageAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.download

DownloadOMEROImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROImageAlgorithm

DownloadOMEROImageAlgorithm(DownloadOMEROImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROImageAlgorithm

DownloadOMEROTableAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.download

DownloadOMEROTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROTableAlgorithm

DownloadOMEROTableAlgorithm(DownloadOMEROTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROTableAlgorithm

dragDropEnd(DragSourceDropEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneTabDragSourceListener

dragEnter(DropTargetDragEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.dragdrop.JIPipeCreateCompartmentNodesFromDraggedDataDragAndDropBehavior

dragEnter(DropTargetDragEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.dragdrop.JIPipeCreatePipelineNodesFromDraggedDataDragAndDropBehavior

dragEnter(DragSourceDragEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneTabDragSourceListener

dragEnter(DropTargetDragEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneTabDropTargetListener

dragExit(DropTargetEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.dragdrop.JIPipeCreateCompartmentNodesFromDraggedDataDragAndDropBehavior

dragExit(DropTargetEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.dragdrop.JIPipeCreatePipelineNodesFromDraggedDataDragAndDropBehavior

dragExit(DragSourceEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneTabDragSourceListener

dragExit(DropTargetEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneTabDropTargetListener

dragGestureRecognized(DragGestureEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneTabDragGestureListener

dragOver(DropTargetDragEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.dragdrop.JIPipeCreateCompartmentNodesFromDraggedDataDragAndDropBehavior

dragOver(DropTargetDragEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.dragdrop.JIPipeCreatePipelineNodesFromDraggedDataDragAndDropBehavior

dragOver(DragSourceDragEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneTabDragSourceListener

dragOver(DropTargetDragEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneTabDropTargetListener

dragTabIndex - Variable in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPane

DragThroughMouseListener(Component, Component) - Constructor for class org.hkijena.jipipe.utils.UIUtils.DragThroughMouseListener

draw(ROI3DListData, ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.utils.Roi3DDrawer

draw(Graphics) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegPointHandler

Draw the landmarks.

draw(ImagePlus, boolean, boolean, boolean, ROIElementDrawingMode, ROIElementDrawingMode, int, Color, Color) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Draw on top of an RGB image

draw(ImageProcessor, ImageSliceIndex, boolean, boolean, boolean, boolean, boolean, boolean, int, Color, Color, Collection<Roi>) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Draw on top of an RGB processor with specified coordinates.

draw(ImagePlus, ROI2DListData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

draw(ImagePlus, ImageProcessor, Roi, int, Rectangle, Color, Color, Font, boolean) - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiLabel

Draws a label on an image processor

draw(Graphics2D, Roi, int, Point2D, double, Color, Color, Font, boolean) - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiLabel

draw(int, int, int, ImageProcessor) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin2D

Draws the image in the processor

draw(int, int, int, ImageProcessor) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.CalibrationPlugin2D

draw(int, int, int, ImageProcessor) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.LUTManagerPlugin2D

draw(int, int, int, ImageProcessor) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

drawAnchoredStringLabel(ImageProcessor, String, Rectangle, Color, Color, Font, boolean, Anchor) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

drawCenteredStringLabel(ImagePlus, ImageProcessor, String, Rectangle, Color, Color, Font, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

drawCheck(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.utils.ui.CheckBoxIcon

drawCheck(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.utils.ui.CheckBoxMenuItemIcon

DrawerLabelSettings - Class in org.hkijena.jipipe.plugins.ijtrackmate.utils

DrawerLabelSettings() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.utils.DrawerLabelSettings

DrawerLabelSettings(DrawerLabelSettings) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.utils.DrawerLabelSettings

drawFilamentsOnGraphics(Filaments3DGraphData, Graphics2D, Rectangle, double, int, int, int, boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

drawFilamentsOnProcessor(Filaments3DGraphData, ColorProcessor, int, int, int) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

drawHistogramLine(Overlay, Histogram2D, RandomAccessibleInterval<? extends RealType<?>>, double, double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

drawHorizontalItem(Graphics2D, CategoryItemRendererState, Rectangle2D, CategoryPlot, CategoryAxis, ValueAxis, CategoryDataset, int, int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Draws the visual representation of a single data item when the plot has a horizontal orientation.

drawItem(Graphics2D, CategoryItemRendererState, Rectangle2D, CategoryPlot, CategoryAxis, ValueAxis, CategoryDataset, int, int, int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Draw a single data item.

drawLabelBallOnProcessor(int, int, int, int, int, boolean, ImageProcessor, int) - Static method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

drawLabelLineOnProcessor(double, double, double, double, double, double, int, double, double, ImageProcessor, int) - Static method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

drawLabelOnGraphics(String, Graphics2D, double, double, double, Color, Color, Font, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

Draws a label on graphics

drawLabels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

DrawLineOvalRectangleRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw

DrawLineOvalRectangleRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm

DrawLineOvalRectangleRoiAlgorithm(DrawLineOvalRectangleRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm

DrawLineOvalRectangleRoiAlgorithm.Entry - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw

DrawLineOvalRectangleRoiAlgorithm.RoiType - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw

drawMask(boolean, boolean, int, ImagePlus) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Draws the ROI over an existing mask image

DrawMaskAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms

DrawMaskAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawMaskAlgorithm

DrawMaskAlgorithm(DrawMaskAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawMaskAlgorithm

drawMaskForSliceIndex(boolean, boolean, int, ImagePlus, ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Draws the ROI over an existing mask image

drawOnGraphics(SpotsCollectionData, Graphics2D, Rectangle, ImageSliceIndex, Collection<Spot>) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer

drawOnGraphics(TrackCollectionData, Graphics2D, Rectangle, ImageSliceIndex, Collection<DefaultWeightedEdge>) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

drawOnProcessor(ROI2DListData, ColorProcessor, ImageSliceIndex, Set<Roi>) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

Draws rois on a processor

DrawOvalRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw

Deprecated.

DrawOvalRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawOvalRoiAlgorithm

Deprecated.

DrawOvalRoiAlgorithm(DrawOvalRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawOvalRoiAlgorithm

Deprecated.

drawOverlayOnGraphics(ROI2DListData, Graphics2D, Rectangle, ImageSliceIndex, Set<Roi>, double) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

Draws ROI as overlay.

DrawRectangleRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw

Deprecated.

DrawRectangleRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm

Deprecated.

DrawRectangleRoiAlgorithm(DrawRectangleRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm

Deprecated.

DrawROIAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms

DrawROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawROIAlgorithm

DrawROIAlgorithm(DrawROIAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawROIAlgorithm

DrawScaleBarAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration

DrawScaleBarAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

DrawScaleBarAlgorithm(DrawScaleBarAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

DrawScaleBarAlgorithm.TextSettings - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration

DrawScaleBarRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw

DrawScaleBarRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

DrawScaleBarRoiAlgorithm(DrawScaleBarRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

DrawScaleBarRoiAlgorithm.TextSettings - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw

drawStringVerticallyCentered(Graphics2D, String, int, int, FontMetrics) - Static method in class org.hkijena.jipipe.utils.UIUtils

DrawTextRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw

DrawTextRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

DrawTextRoiAlgorithm(DrawTextRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

drawVerticalItem(Graphics2D, CategoryItemRendererState, Rectangle2D, CategoryPlot, CategoryAxis, ValueAxis, CategoryDataset, int, int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Draws the visual representation of a single data item when the plot has a vertical orientation.

drop(DropTargetDropEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.dragdrop.JIPipeCreateCompartmentNodesFromDraggedDataDragAndDropBehavior

drop(DropTargetDropEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.dragdrop.JIPipeCreatePipelineNodesFromDraggedDataDragAndDropBehavior

drop(DropTargetDropEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneTabDropTargetListener

DROP_SHADOW_BORDER - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

dropActionChanged(DropTargetDragEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.dragdrop.JIPipeCreateCompartmentNodesFromDraggedDataDragAndDropBehavior

dropActionChanged(DropTargetDragEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.dragdrop.JIPipeCreatePipelineNodesFromDraggedDataDragAndDropBehavior

dropActionChanged(DragSourceDragEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneTabDragSourceListener

dropActionChanged(DropTargetDragEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneTabDropTargetListener

dummyAccess(Class<?>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

Sets up a dummy access.

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataAnnotation

Fully duplicates the data

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compartments.datatypes.JIPipeCompartmentOutputData

duplicate(JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.data.JIPipeData

Duplicates the data

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore

Fully duplicates the virtual data

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

duplicate() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeEmptyData

duplicate() - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration

Creates a deep copy

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeEmptyThumbnailData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeSerializedJsonObjectData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeWeakDataReferenceData

duplicate(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

duplicate(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo

duplicate(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo

duplicate() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

duplicate() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Copies the algorithm.

duplicate() - Method in class org.hkijena.jipipe.api.nodes.JIPipeIOSlotConfiguration

duplicate(JIPipeGraphNode) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

Copies an existing algorithm instance

duplicate(Object) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterTypeInfo

duplicate(Object) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterTypeInfo

Duplicates the parameter

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.batchassistant.DataBatchStatusData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.datatypes.LegacyCellposeModelData

Deprecated.

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.datatypes.LegacyCellposeSizeModelData

Deprecated.

duplicate(JIPipeGraphNode) - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.clij2.datatypes.CLIJImageData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.dataypes.PathData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.BooleanFormData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.DoubleFormData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.EnumFormData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.GroupHeaderFormData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.IntegerFormData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.StringFormData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.ModelData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotDetectorData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotTrackerData

duplicate(JIPipeGraphNode) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo

duplicate(JIPipeGraphNode) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijweka.datatypes.WekaModelData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ilastik.datatypes.IlastikModelData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.ImageJ2DatasetData

duplicate(JIPipeGraphNode) - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.MaskDrawerFormData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.ROIDrawerFormData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.LUTData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.OMEImageData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

duplicate(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Faster version of the duplicate() method in ImagePlus.

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROAnnotationReferenceData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMERODatasetReferenceData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROGroupReferenceData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROImageReferenceData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROPlateReferenceData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROProjectReferenceData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

duplicate(Object) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.EnumParameterTypeInfo

duplicate(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanParameterTypeInfo

duplicate(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanPrimitiveParameterTypeInfo

duplicate(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ByteParameterTypeInfo

duplicate(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BytePrimitiveParameterTypeInfo

duplicate(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.DoubleParameterTypeInfo

duplicate(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.DoublePrimitiveParameterTypeInfo

duplicate(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.FloatParameterTypeInfo

duplicate(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.FloatPrimitiveParameterTypeInfo

duplicate(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.IntParameterTypeInfo

duplicate(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.IntPrimitiveParameterTypeInfo

duplicate(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.LongParameterTypeInfo

duplicate(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.LongPrimitiveParameterTypeInfo

duplicate(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ShortParameterTypeInfo

duplicate(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ShortPrimitiveParameterTypeInfo

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

duplicate(JIPipeGraphNode) - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2AlgorithmInfo

duplicate() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DIndexedMeshGeometry

duplicate() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry

duplicate() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

duplicate() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DUnindexedMeshGeometry

duplicate() - Method in class org.hkijena.jipipe.plugins.scene3d.model.Scene3DGroupNode

duplicate() - Method in interface org.hkijena.jipipe.plugins.scene3d.model.Scene3DNode

Duplicates the node

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.StringData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.DoubleArrayTableColumnData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.FloatArrayTableColumnData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RelabeledTableColumnData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RowIndexTableColumnData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.StringArrayTableColumnData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ZeroTableColumnData

duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.TableColumnDataReference

duplicateColumn(int, String) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Duplicates a column

DuplicateDataAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms

DuplicateDataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.DuplicateDataAlgorithm

DuplicateDataAlgorithm(DuplicateDataAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.DuplicateDataAlgorithm

duplicateImage(ImageProcessor) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm

duplicateImage(ImageProcessor) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm

duplicateImage(ImageProcessor) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm

duplicateImage(ImageProcessor) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm

duplicateImage(ImageProcessor) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm

duplicateImage(ImageProcessor) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm

duplicateNode(T) - Static method in class org.hkijena.jipipe.JIPipe

Duplicates a JIPipeGraphNode

duplicateObject3D(Object3D) - Static method in class org.hkijena.jipipe.plugins.ij3d.IJ3DUtils

Duplicates an Object3D

duplicateParameter(T) - Static method in class org.hkijena.jipipe.JIPipe

Duplicates a value that is registered as parameter

DynamicCategoryEnumParameter - Class in org.hkijena.jipipe.plugins.parameters.library.jipipe

DynamicCategoryEnumParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicCategoryEnumParameter

Creates a new instance with null value

DynamicCategoryEnumParameter(DynamicStringEnumParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicCategoryEnumParameter

Creates a copy

DynamicCategoryEnumParameter(String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicCategoryEnumParameter

Creates a new instance

DynamicCategoryEnumParameter.Deserializer - Class in org.hkijena.jipipe.plugins.parameters.library.jipipe

Deserializes DynamicCategoryEnumParameter

DynamicCategoryEnumParameter.Serializer - Class in org.hkijena.jipipe.plugins.parameters.library.jipipe

Serializes DynamicCategoryEnumParameter

DynamicDataDisplayOperationIdEnumParameter - Class in org.hkijena.jipipe.plugins.parameters.library.jipipe

Parameter that acts as dynamic enum.

DynamicDataDisplayOperationIdEnumParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter

Creates a new instance with null value

DynamicDataDisplayOperationIdEnumParameter(DynamicDataDisplayOperationIdEnumParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter

Creates a copy

DynamicDataDisplayOperationIdEnumParameter(String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter

Creates a new instance

DynamicDataDisplayOperationIdEnumParameter.Deserializer - Class in org.hkijena.jipipe.plugins.parameters.library.jipipe

Deserializes DynamicDataDisplayOperationIdEnumParameter

DynamicDataDisplayOperationIdEnumParameter.Serializer - Class in org.hkijena.jipipe.plugins.parameters.library.jipipe

Serializes DynamicDataDisplayOperationIdEnumParameter

DynamicDataImportOperationIdEnumParameter - Class in org.hkijena.jipipe.plugins.parameters.library.jipipe

Parameter that acts as dynamic enum.

DynamicDataImportOperationIdEnumParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter

Creates a new instance with null value

DynamicDataImportOperationIdEnumParameter(DynamicDataImportOperationIdEnumParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter

Creates a copy

DynamicDataImportOperationIdEnumParameter(String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter

Creates a new instance

DynamicDataImportOperationIdEnumParameter.Deserializer - Class in org.hkijena.jipipe.plugins.parameters.library.jipipe

Deserializes DynamicDataImportOperationIdEnumParameter

DynamicDataImportOperationIdEnumParameter.Serializer - Class in org.hkijena.jipipe.plugins.parameters.library.jipipe

Serializes DynamicDataImportOperationIdEnumParameter

DynamicDebouncer - Class in org.hkijena.jipipe.utils.debounce

DynamicDebouncer(long, TimeUnit) - Constructor for class org.hkijena.jipipe.utils.debounce.DynamicDebouncer

DynamicDebouncer(long) - Constructor for class org.hkijena.jipipe.utils.debounce.DynamicDebouncer

DynamicEnumDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.api.enums

A parameter editor UI that works for all enumerations

DynamicEnumDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicEnumDesktopParameterEditorUI

DynamicEnumDesktopParameterEditorUI.Renderer<T> - Class in org.hkijena.jipipe.plugins.parameters.api.enums

Renders items in enum parameters

DynamicEnumParameter<T> - Class in org.hkijena.jipipe.plugins.parameters.api.enums

Parameter that acts as dynamic enum.

DynamicEnumParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicEnumParameter

Creates a new instance with null value

DynamicEnumParameter(T) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicEnumParameter

Creates a new instance

DynamicEnumParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.parameters.api.enums

Settings for dynamic enum-like parameters for non Enum data types

DynamicSetDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.api.enums

A parameter editor UI that works for all enumerations

DynamicSetDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetDesktopParameterEditorUI

DynamicSetParameter<T> - Class in org.hkijena.jipipe.plugins.parameters.api.enums

Parameter that acts as dynamic enum where a set of items can be selected Use DynamicEnumParameterSettings to define a supplier for the items.

DynamicSetParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetParameter

Creates a new instance with null value

DynamicSetParameter(DynamicSetParameter<T>) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetParameter

DynamicSetParameter(Set<T>) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetParameter

DynamicSetParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.parameters.api.enums

Settings for dynamic enum-like parameters for non Enum data types

DynamicSidebarRatio() - Constructor for class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.DynamicSidebarRatio

DynamicSidebarRatio(int, boolean) - Constructor for class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.DynamicSidebarRatio

DynamicStringEnumParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Parameter that acts as dynamic enum.

DynamicStringEnumParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.DynamicStringEnumParameter

Creates a new instance with null value

DynamicStringEnumParameter(DynamicStringEnumParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.DynamicStringEnumParameter

Creates a copy

DynamicStringEnumParameter(String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.DynamicStringEnumParameter

Creates a new instance

DynamicStringEnumParameter.Deserializer - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Deserializes DynamicStringEnumParameter

DynamicStringEnumParameter.Serializer - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Serializes DynamicStringEnumParameter

DynamicStringSetParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Parameter that acts as dynamic enum where a set of items can be selected Use DynamicSetParameterSettings to define a supplier for the items.

DynamicStringSetParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.DynamicStringSetParameter

DynamicStringSetParameter(DynamicStringSetParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.DynamicStringSetParameter

DynamicStringSetParameter(Set<String>) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.DynamicStringSetParameter

E

Edge() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.layout.MSTGraphAutoLayoutImplementation.Edge

edgeAdded(GraphEdgeChangeEvent<V, E>) - Method in class org.hkijena.jipipe.utils.WeakPredecessorInspector

EdgeCandidate(FilamentVertex, FilamentVertex, double) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm.EdgeCandidate

EdgeCandidate(FilamentVertex, FilamentVertex, double) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm.EdgeCandidate

EdgeCandidate(FilamentVertex, FilamentVertex, double) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm.EdgeCandidate

EdgeFeature - Class in org.hkijena.jipipe.plugins.ijtrackmate.parameters

EdgeFeature() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.EdgeFeature

EdgeFeature(EdgeFeature) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.EdgeFeature

EdgeFeature(String) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.EdgeFeature

EdgeFeature.Deserializer - Class in org.hkijena.jipipe.plugins.ijtrackmate.parameters

EdgeFilter3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.features

EdgeFilter3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.features.EdgeFilter3DAlgorithm

EdgeFilter3DAlgorithm(EdgeFilter3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.features.EdgeFilter3DAlgorithm

EdgeMaskParameter - Class in org.hkijena.jipipe.plugins.ijfilaments.parameters

EdgeMaskParameter() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.parameters.EdgeMaskParameter

EdgeMaskParameter(EdgeMaskParameter) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.parameters.EdgeMaskParameter

edgeRemoved(GraphEdgeChangeEvent<V, E>) - Method in class org.hkijena.jipipe.utils.WeakPredecessorInspector

edgesFromJson(JsonNode, JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

edgeToRoiLine(FilamentEdge, int, int, int, int) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

editRunSet(JIPipeDesktopWorkbench, JIPipeProjectRunSet) - Static method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopRunSetsListEditor

editRuntimePartition(JIPipeDesktopWorkbench, JIPipeRuntimePartition) - Static method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopRuntimePartitionListEditor

editTemplate(JIPipeNodeTemplate, JIPipeNodeTemplate, JIPipeProject) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

EigenvalueSelection2D - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.parameters

Available options to which Eigenvalue to select This is for 2D eigenvalues where two images are generated

ElementAccessOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

ElementAccessOperator(String, int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.ElementAccessOperator

EllipseMaskDrawer2DTool - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer

Ellipse drawing Allows left-click canvas dragging

EllipseMaskDrawer2DTool(MaskDrawerPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.EllipseMaskDrawer2DTool

emit(Event) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter

emitNodeSlotsChangedEvent() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Triggers an event that indicates that the slots have changed

emitParameterChangedEvent(String) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

Triggers a JIPipeParameterCollection.ParameterChangedEvent on this collection

emitParameterStructureChangedEvent() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

Triggers a JIPipeParameterCollection.ParameterStructureChangedEvent on this collection

emitParameterUIChangedEvent() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

Triggers a JIPipeParameterCollection.ParameterUIChangedEvent on this collection

emitRefreshedEvent() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

EMPTY - Static variable in class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLText

EmptyImageJ2OutOfBoundsFactory - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds

EmptyImageJ2OutOfBoundsFactory() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.EmptyImageJ2OutOfBoundsFactory

EmptyImageJ2OutOfBoundsFactory(EmptyImageJ2OutOfBoundsFactory) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.EmptyImageJ2OutOfBoundsFactory

EmptyImageJ2ShapeData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.shapes

EmptyImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.EmptyImageJ2ShapeData

EmptyImageJ2ShapeData(EmptyImageJ2ShapeData) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.EmptyImageJ2ShapeData

EmptyImageJDataExporter - Class in org.hkijena.jipipe.api.compat

An exporter that does nothing

EmptyImageJDataExporter() - Constructor for class org.hkijena.jipipe.api.compat.EmptyImageJDataExporter

EmptyImageJDataExporterUI - Class in org.hkijena.jipipe.api.compat

Default implementation of an ImageJ data exporter UI

EmptyImageJDataExporterUI(JIPipeDesktopWorkbench, ImageJDataExportOperation) - Constructor for class org.hkijena.jipipe.api.compat.EmptyImageJDataExporterUI

EmptyImageJDataImporter - Class in org.hkijena.jipipe.api.compat

An importer that does nothing

EmptyImageJDataImporter() - Constructor for class org.hkijena.jipipe.api.compat.EmptyImageJDataImporter

EmptyImageJDataImporterUI - Class in org.hkijena.jipipe.api.compat

Default implementation of an ImageJ data importer UI

EmptyImageJDataImporterUI(JIPipeDesktopWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.api.compat.EmptyImageJDataImporterUI

EnableNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

EnableNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableNodeUIContextAction

EnablePassThroughNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

EnablePassThroughNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnablePassThroughNodeUIContextAction

EnableSaveOutputsNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

EnableSaveOutputsNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableSaveOutputsNodeUIContextAction

EnableVirtualOutputsNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

EnableVirtualOutputsNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableVirtualOutputsNodeUIContextAction

endModificationBlock() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Ends a modification block started by beginModificationBlock().

EnlargeShrinkRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Wrapper around RoiManager

EnlargeShrinkRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.EnlargeShrinkRoiAlgorithm

EnlargeShrinkRoiAlgorithm(EnlargeShrinkRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.EnlargeShrinkRoiAlgorithm

enqueue(JIPipeDataItemStore, int, int) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue

enqueue(JIPipeRunnable) - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

Schedules a new runnable

EnqueuedEvent(JIPipeRunnable, JIPipeRunnableWorker) - Constructor for class org.hkijena.jipipe.api.run.JIPipeRunnable.EnqueuedEvent

EnqueuedEventEmitter() - Constructor for class org.hkijena.jipipe.api.run.JIPipeRunnable.EnqueuedEventEmitter

enqueueProject(JIPipeProject, Path, int) - Static method in class org.hkijena.jipipe.JIPipe

Runs a project in a different thread.

enqueueProject(JIPipeProject, JIPipeGraphRunConfiguration) - Static method in class org.hkijena.jipipe.JIPipe

Runs a project in the current thread.

enqueueUpdateCachedArtifacts() - Method in class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry

ensureComposite() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

ensureEmptyFolder(Component, Path) - Static method in class org.hkijena.jipipe.utils.PathUtils

Ensures that the path exists and is empty

ensureEqualSize(ImagePlus, ImagePlus, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Applies copy-scaling to ensure that the target image has the same size as the reference image Will silently drop slices that are outside the range of the reference image

ensureExactValue(boolean) - Method in class org.hkijena.jipipe.plugins.expressions.NumericFunctionExpression

Modifies the expression to 0 or x depending on whether an exact value should be set

ensureExtension(Path, String, String...) - Static method in class org.hkijena.jipipe.utils.PathUtils

Ensures that the file name of the path has one of the provided extensions

ensureInstance() - Static method in class org.hkijena.jipipe.JIPipe

Ensures that JIPipe is initialized and available.

ensureInstance(Context) - Static method in class org.hkijena.jipipe.JIPipe

Ensures that JIPipe is initialized and available.

ensureParentDirectoriesExist(Path) - Static method in class org.hkijena.jipipe.utils.PathUtils

Ensures that the parent directories of the path exist.

ensureSize(ImagePlus, int, int, int, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Returns an image that has the specified size by copying

Entry() - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByProjectPaths.Entry

Entry() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm.Entry

Entry(AnnotateOMEWithMetadataAlgorithm.Entry) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm.Entry

Entry() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm.Entry

Entry(OMEMetadataToTableAlgorithm.Entry) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm.Entry

Entry() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm.Entry

Entry(DrawLineOvalRectangleRoiAlgorithm.Entry) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm.Entry

Entry() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo.Entry

Entry(ImageSliceIndex, ImageSliceIndex, TurboRegTransformationType, double[][], double[][]) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo.Entry

Entry(TurboRegTransformationInfo.Entry) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo.Entry

Entry() - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.json.AnnotateWithJsonDataAlgorithm.Entry

Entry(AnnotateWithJsonDataAlgorithm.Entry) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.json.AnnotateWithJsonDataAlgorithm.Entry

Entry() - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.json.ExtractJsonDataAsTableAlgorithm.Entry

Entry(ExtractJsonDataAsTableAlgorithm.Entry) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.json.ExtractJsonDataAsTableAlgorithm.Entry

Entry() - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.text.AnnotateWithTextDataAlgorithm.Entry

Entry(AnnotateWithTextDataAlgorithm.Entry) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.text.AnnotateWithTextDataAlgorithm.Entry

Entry() - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.text.TextDataToTableAlgorithm.Entry

Entry(TextDataToTableAlgorithm.Entry) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.text.TextDataToTableAlgorithm.Entry

Entry() - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.xml.AnnotateWithXPathDataAlgorithm.Entry

Entry(AnnotateWithXPathDataAlgorithm.Entry) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.xml.AnnotateWithXPathDataAlgorithm.Entry

Entry() - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm.Entry

Entry(ExtractXPathDataAsTableAlgorithm.Entry) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm.Entry

Entry() - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2.Entry

Entry(ApplyExpressionPerRowAlgorithm2.Entry) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2.Entry

EntryRankingFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderUI.EntryRankingFunction

EntryRenderer() - Constructor for class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderUI.EntryRenderer

EntryToStringFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderUI.EntryToStringFunction

EnumDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.api.enums

A parameter editor UI that works for all enumerations

EnumDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.enums.EnumDesktopParameterEditorUI

EnumDesktopParameterEditorUI.Renderer - Class in org.hkijena.jipipe.plugins.parameters.api.enums

Renders items in enum parameters

EnumFormData - Class in org.hkijena.jipipe.plugins.forms.datatypes

EnumFormData() - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.EnumFormData

EnumFormData(EnumFormData) - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.EnumFormData

EnumFormGeneratorAlgorithm - Class in org.hkijena.jipipe.plugins.forms.algorithms.generators

EnumFormGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.generators.EnumFormGeneratorAlgorithm

EnumFormGeneratorAlgorithm(EnumFormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.generators.EnumFormGeneratorAlgorithm

EnumItemInfo - Interface in org.hkijena.jipipe.plugins.parameters.api.enums

Used by EnumDesktopParameterEditorUI to extract icons and other information for its enum value

EnumParameterGenerator - Class in org.hkijena.jipipe.plugins.parameters.api.enums

EnumParameterGenerator() - Constructor for class org.hkijena.jipipe.plugins.parameters.api.enums.EnumParameterGenerator

EnumParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.parameters.api.enums

Settings for EnumDesktopParameterEditorUI

EnumParameterTypeInfo - Class in org.hkijena.jipipe.plugins.parameters.api.enums

Helper class to register Enum parameters

EnumParameterTypeInfo(String, Class<? extends Enum<?>>, String, String) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.enums.EnumParameterTypeInfo

ENVIRONMENT_ID - Static variable in class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonAdapterLibraryEnvironment

ENVIRONMENT_ID - Static variable in class org.hkijena.jipipe.plugins.python.PythonEnvironment

ENVIRONMENT_ID - Static variable in class org.hkijena.jipipe.plugins.r.REnvironment

EnvironmentVariablesSource - Class in org.hkijena.jipipe.utils

EnvironmentVariablesSource() - Constructor for class org.hkijena.jipipe.utils.EnvironmentVariablesSource

EOL_COMMENT - Static variable in class org.hkijena.jipipe.plugins.r.ui.RTokenMaker

lexical states

EqualityPredicateOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

EqualityPredicateOperator(String, int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.EqualityPredicateOperator

equalize(ImagePlus, boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm

equalize(ImageProcessor, boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm

Changes the tone curves of images.

equalize(List<ImagePlus>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.CanvasEqualizer

equalizeVersionComponents(int[]...) - Method in class org.hkijena.jipipe.utils.VersionUtils

equals(Object) - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

Returns true if the name and value are equal

equals(Object) - Method in class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext

equals(Object) - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo

equals(Object) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

equals(Object) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference

equals(Object) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

equals(Object) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification

equals(Object) - Method in class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceParameter

equals(Object) - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry

equals(Object) - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

equals(Object) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameterVariableInfo

equals(Object) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm.EdgeCandidate

equals(Object) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm.EdgeCandidate

equals(Object) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm.EdgeCandidate

equals(Object) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

equals(Object) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.Point3d

equals(Object) - Method in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetDescription

equals(Object) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceCube

equals(Object) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

equals(Object) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndices

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicEnumParameter

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetParameter

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameter

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameter

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptParameter

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.auth.PasswordParameter

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.filesystem.FileChooserBookmark

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.images.ImageParameter

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLText

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRange

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeParameter

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExporterRef

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImporterRef

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRef

equals(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRef

equals(Object) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Tests this renderer for equality with an arbitrary object.

equals(Object) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.IndexedDoublePoint

equals(Object) - Method in class org.hkijena.jipipe.utils.data.OwningStore

equals(Object) - Method in class org.hkijena.jipipe.utils.data.WeakStore

EqualsStringPredicateFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

EqualsStringPredicateFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.EqualsStringPredicateFunction

ErodedVolumeFraction3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.binary

ErodedVolumeFraction3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.binary.ErodedVolumeFraction3DAlgorithm

ErodedVolumeFraction3DAlgorithm(ErodedVolumeFraction3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.binary.ErodedVolumeFraction3DAlgorithm

ErodeEndVerticesAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

ErodeEndVerticesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ErodeEndVerticesAlgorithm

ErodeEndVerticesAlgorithm(ErodeEndVerticesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ErodeEndVerticesAlgorithm

error(String) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.JIPipeLogger

error(Object, String) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROToJIPipeLogger

error(Object, LogMessage) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROToJIPipeLogger

ERROR_PLACEHOLDER_TEXT - Static variable in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewer

escapeString(String) - Static method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

Escapes a string, so it can be used within quotes

escapeString(String, boolean) - Static method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameter

Escapes a string

escapeString(String) - Static method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameter

Escapes a string as valid expression (with quotes)

escapeString(String) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

Escapes a string to be used within Python code Will not add quotes around the string

escapeString(String) - Static method in class org.hkijena.jipipe.utils.scripting.MacroUtils

Escapes a string to be used within macros Will not add quotes around the string

escapeVariable(String) - Static method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

Escapes a variable name into a valid expression

estimateEpsilon(List<IndexedDoublePoint>) - Static method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm

estimateMinPoints(List<IndexedDoublePoint>) - Static method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm

evaluate(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

Runs the expression and returns the result.

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionFunction

Runs the function on given parameters

evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionOperator

Evaluates the operator

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.CreateArrayFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.CreateMapFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.CreatePairArrayFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.FirstIndexOfFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.GetFirstItemFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.GetItemFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.GetItemOrDefaultFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.GetLastItemFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.GetMapKeysFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.GetMapValuesFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.InvertFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.LastIndexOfFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.SliceAfterFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.SliceBeforeFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.SliceFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.SortAscendingArrayFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.SortDescendingArrayFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.SummarizeAnnotationsMapFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.SummarizeMapFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.CreateHSBColorFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.CreateLABColorFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.CreateRGBColorFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.FalseColorsFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.HexToRGBFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.HSBToLABFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.HSBToRGBFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.LABToHSBFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.LABToRGBFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.RGBToHexFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.RGBToHSBFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.RGBToLABFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.ColumnOperationAdapterFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.ContainsStringPredicateFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.control.CaseFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.control.IfElseExprFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.control.IfElseFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.control.SwitchCaseFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.control.SwitchFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.control.SwitchMapFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.control.WhereFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.convert.ToBooleanFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.convert.ToIntegerFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.convert.ToJsonFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.convert.ToNumber2Function

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.convert.ToNumberFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.convert.ToStringFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.CopyNFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.datetime.GetDateDayFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.datetime.GetDateMonthFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.datetime.GetDateYearFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.datetime.GetTimeHoursFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.datetime.GetTimeMinutesFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.datetime.GetTimeSecondsFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.EvaluateFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.ExpressionSequenceFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.filesystem.GetParentDirectoryFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.filesystem.GetPathNameFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.filesystem.IsDirectoryFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.filesystem.IsFileFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.filesystem.PathCombineFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.filesystem.PathExistsFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.ForEachFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.functions.DefineUserFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.functions.EvaluateUserFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.GlobStringPredicateFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.IsNullFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.LengthFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.ClampFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.DoubleToStringFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.IsFiniteFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.IsInfiniteFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.IsNaNFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.NaNToNumFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.PercentageFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.RandomFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.RoundToDecimalsFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.RoundToEvenFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.RoundToOddFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.ParseJsonFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.quantities.QuantityConvertFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.quantities.QuantityGetUnitFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.quantities.QuantityGetValueFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.RemoveDuplicatesFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.RunFunctionFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.scripts.JavaScriptFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.scripts.JythonScriptFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.SequenceFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.AccumulateFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.CumulativeTransformArrayFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.PercentileFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.TransformArrayFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.EqualsStringPredicateFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.ExtractRegexMatchesFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.RegexStringPredicateFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringEndsWithPredicateFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringFirstIndexOfFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringFixFileNameFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringFormatFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringJoinFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringLastIndexOfFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringRegexReplaceFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringReplaceFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringSliceBeforeFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringSliceFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringSplitFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringStartsWithPredicateFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringToLowerCaseFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringToUpperCaseFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringTrimFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringTruncateFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.SummarizeVariablesFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.util.PrintFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.VariableExistsFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.variables.GetVariableFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.variables.GetVariableKeysFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.variables.GetVariablesAsMapFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.variables.GetVariableValuesFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.variables.HasVariableFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.variables.SetMissingVariableFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.variables.SetVariableFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.variables.SetVariableIfFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.variables.SetVariablesFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.vector.VectorAddFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.vector.VectorEuclideanNormFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.vector.VectorManhattanNormFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.vector.VectorMaximumNormFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.vector.VectorMultiplyScalarFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.vector.VectorNormalizeFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.vector.VectorScalarProductFunction

evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.functions.vector.VectorSubtractFunction

evaluate(String, Object) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

evaluate(Function, Iterator<Object>, Object) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

evaluate(Constant, Object) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

evaluate(Operator, Iterator<Object>, Object) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

evaluate(Map<Object, Object>, Object) - Method in class org.hkijena.jipipe.plugins.expressions.operators.AdditionFunctionOperator

evaluate(Collection<Object>, Object) - Method in class org.hkijena.jipipe.plugins.expressions.operators.AdditionFunctionOperator

evaluate(double, double) - Method in class org.hkijena.jipipe.plugins.expressions.operators.AdditionFunctionOperator

evaluate(String, String) - Method in class org.hkijena.jipipe.plugins.expressions.operators.AdditionFunctionOperator

evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.operators.ContainsOperator

evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.operators.ContainsOperator2

evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.operators.ElementAccessOperator

evaluate(Collection<Object>, Collection<Object>) - Method in class org.hkijena.jipipe.plugins.expressions.operators.EqualityPredicateOperator

evaluate(Map<Object, Object>, Map<Object, Object>) - Method in class org.hkijena.jipipe.plugins.expressions.operators.EqualityPredicateOperator

evaluate(double, double) - Method in class org.hkijena.jipipe.plugins.expressions.operators.EqualityPredicateOperator

evaluate(String, String) - Method in class org.hkijena.jipipe.plugins.expressions.operators.EqualityPredicateOperator

evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.operators.GenericOperator

evaluate(Map<Object, Object>, Object) - Method in class org.hkijena.jipipe.plugins.expressions.operators.GenericOperator

evaluate(Collection<Object>, Object) - Method in class org.hkijena.jipipe.plugins.expressions.operators.GenericOperator

evaluate(double, double) - Method in class org.hkijena.jipipe.plugins.expressions.operators.GenericOperator

evaluate(String, String) - Method in class org.hkijena.jipipe.plugins.expressions.operators.GenericOperator

evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.operators.GenericPredicateOperator

evaluate(Collection<Object>, Collection<Object>) - Method in class org.hkijena.jipipe.plugins.expressions.operators.GenericPredicateOperator

evaluate(Map<Object, Object>, Map<Object, Object>) - Method in class org.hkijena.jipipe.plugins.expressions.operators.GenericPredicateOperator

evaluate(double, double) - Method in class org.hkijena.jipipe.plugins.expressions.operators.GenericPredicateOperator

evaluate(String, String) - Method in class org.hkijena.jipipe.plugins.expressions.operators.GenericPredicateOperator

evaluate(Collection<Object>, Collection<Object>) - Method in class org.hkijena.jipipe.plugins.expressions.operators.InequalityPredicateOperator

evaluate(Map<Object, Object>, Map<Object, Object>) - Method in class org.hkijena.jipipe.plugins.expressions.operators.InequalityPredicateOperator

evaluate(double, double) - Method in class org.hkijena.jipipe.plugins.expressions.operators.InequalityPredicateOperator

evaluate(String, String) - Method in class org.hkijena.jipipe.plugins.expressions.operators.InequalityPredicateOperator

evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.operators.LogicalAndOperator

evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.operators.LogicalNotOperator

evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.operators.LogicalOrOperator

evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.operators.LogicalXOrOperator

evaluate(double, double) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericDivideFunctionOperator

evaluate(double, double) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericExponentFunctionOperator

evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericFunctionOperator

evaluate(double, double) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericFunctionOperator

evaluate(double, double) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericGreaterThanOrEqualPredicateOperator

evaluate(double, double) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericGreaterThanPredicateOperator

evaluate(double, double) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericLessThanOrEqualPredicateOperator

evaluate(double, double) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericLessThanPredicateOperator

evaluate(double, double) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericModuloFunctionOperator

evaluate(double, double) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericMultiplyFunctionOperator

evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericOrStringFunctionOperator

evaluate(double, double) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericOrStringFunctionOperator

evaluate(String, String) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericOrStringFunctionOperator

evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericPredicateOperator

evaluate(double, double) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericPredicateOperator

evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.operators.PairOperator

evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.operators.ResolveVariableOperator

evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.operators.StatementOperator

evaluate(Map<Object, Object>, Object) - Method in class org.hkijena.jipipe.plugins.expressions.operators.SubtractionFunctionOperator

evaluate(Collection<Object>, Object) - Method in class org.hkijena.jipipe.plugins.expressions.operators.SubtractionFunctionOperator

evaluate(double, double) - Method in class org.hkijena.jipipe.plugins.expressions.operators.SubtractionFunctionOperator

evaluate(String, String) - Method in class org.hkijena.jipipe.plugins.expressions.operators.SubtractionFunctionOperator

evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.operators.VariableExistsOperator

evaluate(MetadataRetrieve) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OMEAccessorParameter

evaluate() - Method in class org.hkijena.jipipe.utils.ui.ExpressionTesterUI

EvaluateFunction - Class in org.hkijena.jipipe.plugins.expressions.functions

EvaluateFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.EvaluateFunction

evaluateToBoolean(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

Runs the expression and returns the boolean result.

evaluateToColor(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

Runs the expression and returns a color result.

evaluateToDouble(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

Runs the expression and returns the numeric result.

evaluateToDoubleList(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

Runs the expression and returns the numeric result.

evaluateToFloat(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

Runs the expression and returns the numeric result.

evaluateToInteger(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

Runs the expression and returns the numeric result.

evaluateToIntegerSafe(JIPipeExpressionVariablesMap, int) - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

Runs the expression and returns the numeric result.

evaluateToNumber(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

Runs the expression and returns the numeric result.

evaluateToString(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

Runs the expression and returns the string result.

evaluateToString(MetadataRetrieve) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OMEAccessorParameter

EvaluateUserFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.functions

EvaluateUserFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.functions.EvaluateUserFunction

executePostprocess() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstaller

Postprocessing steps (optional) that are executed after the extraction of the archive

executeScheduledRegisterExamples() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

executeScheduledRegisterTemplates() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

ExistingCompartmentDatabaseEntry - Class in org.hkijena.jipipe.api.nodes.database

ExistingCompartmentDatabaseEntry(String, JIPipeProjectCompartment) - Constructor for class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

ExistingPipelineNodeDatabaseEntry - Class in org.hkijena.jipipe.api.nodes.database

ExistingPipelineNodeDatabaseEntry(String, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

exists(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage

exists(String) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage

Returns true if the storage contains given element

exists(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage

Returns true if the storage contains given element

exists(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage

exists() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewCompartmentNodeDatabaseEntry

exists() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

exists() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

exists() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

exists() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

exists() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

exists() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry

exitLater(int) - Static method in class org.hkijena.jipipe.JIPipe

Exits the Java application in 500ms Prevents the lockup of Java under certain circumstances

exitValue() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree

expandAllTree(JTree) - Static method in class org.hkijena.jipipe.utils.UIUtils

Expands the whole tree

expandImage(ImageProcessor, int, int, int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.CanvasEqualizer

expandImage(ImageProcessor, int, int, int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm

expandImageCanvas(ImagePlus, Color, int, int, Anchor) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Expands the canvas of an image

expandImageProcessorCanvas(ImageProcessor, Color, int, int, int, int) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

expandImageStackCanvas(ImageStack, Color, int, int, int, int) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

ExpandLabelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

ExpandLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ExpandLabelsAlgorithm

ExpandLabelsAlgorithm(ExpandLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ExpandLabelsAlgorithm

expandLeftTop(int, int) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Expands the canvas by moving all algorithms.

expandRightBottom(int, int) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Expands the canvas

expandStack(ImageStack, int, int, int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.CanvasEqualizer

expandStack(ImageStack, int, int, int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm

ExpColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a exponential (base e) function

ExpColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.ExpColumnOperation

ExplodeRoi3DListAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split

ExplodeRoi3DListAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.ExplodeRoi3DListAlgorithm

Instantiates a new node type.

ExplodeRoi3DListAlgorithm(ExplodeRoi3DListAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.ExplodeRoi3DListAlgorithm

Instantiates a new node type.

ExplodeRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split

Wrapper around RoiManager

ExplodeRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.ExplodeRoiAlgorithm

Instantiates a new node type.

ExplodeRoiAlgorithm(ExplodeRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.ExplodeRoiAlgorithm

Instantiates a new node type.

exportAllSlicesToPNG() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

ExportCompartmentAsJsonNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

ExportCompartmentAsJsonNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.ExportCompartmentAsJsonNodeUIContextAction

exportCurrentSliceToPNG() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compartments.datatypes.JIPipeCompartmentOutputData

exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compat.DataTableImageJDataExporter

exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compat.EmptyImageJDataExporter

exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.compat.ImageJDataExporter

Converts a JIPipe data type to its corresponding ImageJ data type

exportData(JIPipeData, ImageJExportParameters, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.compat.ImageJDataExporter

Converts a JIPipe data type to its corresponding ImageJ data type

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.data.JIPipeData

Saves the data to a folder

exportData(JIPipeWriteDataStorage, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Saves the data contained in this slot into the storage path.

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeEmptyData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeEmptyThumbnailData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeSerializedJsonObjectData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeWeakDataReferenceData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData

exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.compat.LegacyCellposeModelImageJExporter

exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.compat.LegacyCellposeSizeModelImageJExporter

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.datatypes.LegacyCellposeModelData

Deprecated.

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.datatypes.LegacyCellposeSizeModelData

Deprecated.

exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.clij2.compat.CLIIJ2DataToImageWindowImageJExporter

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.clij2.datatypes.CLIJImageData

ExportData - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

ExportData(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportData

ExportData(ExportData) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportData

exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.compat.PathDataToTableImageJExporter

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.dataypes.PathData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.FormData

exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.compat.ROI3DImageJExporter

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.ModelData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotDetectorData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotTrackerData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijweka.datatypes.WekaModelData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ilastik.datatypes.IlastikModelData

exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.compat.IJ2DataToImageWindowImageJExporter

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.ImageJ2DatasetData

exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.ImagePlusDataToImageWindowImageJExporter

exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.OMEImageToImageWindowImageJExporter

exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.RoiManagerImageJExporter

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFTData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.LUTData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.OMEImageData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROAnnotationReferenceData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMERODatasetReferenceData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROGroupReferenceData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROImageReferenceData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROPlateReferenceData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROProjectReferenceData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.StringData

exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.compat.ResultsTableDataImageJExporter

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.DoubleArrayTableColumnData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.FloatArrayTableColumnData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RelabeledTableColumnData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RowIndexTableColumnData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.StringArrayTableColumnData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ZeroTableColumnData

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.TableColumnDataReference

exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.datatypes.JIPipeOutputData

ExportDataByParameter - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

ExportDataByParameter(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter

ExportDataByParameter(ExportDataByParameter) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter

ExportDataByParameter2 - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

ExportDataByParameter2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter2

ExportDataByParameter2(ExportDataByParameter2) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter2

exportDataRow_(JIPipeWriteDataStorage, int, List<Dimension>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

NOT THREAD-SAFE

ExportDataTable - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

ExportDataTable(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataTable

ExportDataTable(ExportDataTable) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataTable

ExportDataTableByParameter - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

ExportDataTableByParameter(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataTableByParameter

ExportDataTableByParameter(ExportDataTableByParameter) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataTableByParameter

ExportIlastikHDF5ImageAlgorithm - Class in org.hkijena.jipipe.plugins.ilastik.nodes

ExportIlastikHDF5ImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.ExportIlastikHDF5ImageAlgorithm

ExportIlastikHDF5ImageAlgorithm(ExportIlastikHDF5ImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.ExportIlastikHDF5ImageAlgorithm

ExportImage2Algorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

ExportImage2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImage2Algorithm

ExportImage2Algorithm(ExportImage2Algorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImage2Algorithm

ExportImageAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

Deprecated.

ExportImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

ExportImageAlgorithm(ExportImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

ExportImageAlgorithm.FileFormat - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

Deprecated.

ExportImageDirectorySlotAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

ExportImageDirectorySlotAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm

ExportImageDirectorySlotAlgorithm(ExportImageDirectorySlotAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm

ExportImagePlusAsOMEZARRAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io

ExportImagePlusAsOMEZARRAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm

ExportImagePlusAsOMEZARRAlgorithm(ExportImagePlusAsOMEZARRAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm

ExportImagePlusAsOMEZARRAlgorithm.Compression - Enum in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io

ExportImagePlusAsOMEZARRAlgorithm.OutputFormat - Enum in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io

ExportImpImageAlgorithm - Class in org.hkijena.jipipe.plugins.imp.nodes

ExportImpImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imp.nodes.ExportImpImageAlgorithm

ExportImpImageAlgorithm(ExportImpImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imp.nodes.ExportImpImageAlgorithm

ExportNodeJsonsTool - Class in org.hkijena.jipipe.plugins.dev

ExportNodeJsonsTool(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.dev.ExportNodeJsonsTool

Creates a new instance

ExportNodeParameterJsonsTool - Class in org.hkijena.jipipe.plugins.dev

ExportNodeParameterJsonsTool(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.dev.ExportNodeParameterJsonsTool

Creates a new instance

ExportNodeSignatureJsonsTool - Class in org.hkijena.jipipe.plugins.dev

ExportNodeSignatureJsonsTool(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.dev.ExportNodeSignatureJsonsTool

Creates a new instance

ExportNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories

ExportNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory

exportOrGetLink(Path) - Method in class org.hkijena.jipipe.plugins.ilastik.datatypes.IlastikModelData

exportOutputToImageJ(JIPipeGraphNode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration

Extracts algorithm output into ImageJ.

exportOverlayToNapari(ImagePlus, Path, String, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

exportOverlayToNapari(ImagePlus, Path, String, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

exportOverlayToNapari(ImagePlus, Path, String, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

exportOverlayToNapari(ImagePlus, Path, String, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.plugins.napari.NapariOverlay

exportResourceToFile(String, Path) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

Saves a resource as file

ExportROI3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d

Deprecated.

ExportROI3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.ExportROI3DAlgorithm

Deprecated.

ExportROI3DAlgorithm(ExportROI3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.ExportROI3DAlgorithm

Deprecated.

ExportROI3DAlgorithm2 - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d

ExportROI3DAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.ExportROI3DAlgorithm2

ExportROI3DAlgorithm2(ExportROI3DAlgorithm2) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.ExportROI3DAlgorithm2

ExportROIAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

Deprecated.

ExportROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm

Deprecated.

ExportROIAlgorithm(ExportROIAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm

Deprecated.

ExportROIAlgorithm2 - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

ExportROIAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm2

ExportROIAlgorithm2(ExportROIAlgorithm2) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm2

exportROIsToManager(ROI2DListData) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

exportROIsToManager() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

exportROIsToManager(ROI2DListData) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

ExportScene3DToColladaAlgorithm - Class in org.hkijena.jipipe.plugins.scene3d.nodes

Deprecated.

ExportScene3DToColladaAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm

Deprecated.

ExportScene3DToColladaAlgorithm(ExportScene3DToColladaAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm

Deprecated.

ExportScene3DToColladaAlgorithm2 - Class in org.hkijena.jipipe.plugins.scene3d.nodes

ExportScene3DToColladaAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm2

ExportScene3DToColladaAlgorithm2(ExportScene3DToColladaAlgorithm2) - Constructor for class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm2

ExportTableAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

Deprecated.

ExportTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm

Deprecated.

ExportTableAlgorithm(ExportTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm

Deprecated.

ExportTableAlgorithm.FileFormat - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

Deprecated.

ExportTableAlgorithm2 - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

ExportTableAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm2

ExportTableAlgorithm2(ExportTableAlgorithm2) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm2

ExportTableAsXLSXAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

Deprecated.

ExportTableAsXLSXAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm

Deprecated.

ExportTableAsXLSXAlgorithm(ExportTableAsXLSXAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm

Deprecated.

ExportTableAsXLSXAlgorithm2 - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

ExportTableAsXLSXAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2

ExportTableAsXLSXAlgorithm2(ExportTableAsXLSXAlgorithm2) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2

exportThumbnails(JIPipeWriteDataStorage, Path, List<Dimension>, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.data.JIPipeData

Exports the thumbnails/previews of this data into the provided storage

exportVideo() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

EXPRESSION_PARAMETER_VARIABLES - Static variable in class org.hkijena.jipipe.api.nodes.JIPipeCustomAnnotationMatchingExpressionVariables

ExpressionAndExpressionPairParameter - Class in org.hkijena.jipipe.plugins.parameters.library.pairs

A parameter that renames an integer into another integer

ExpressionAndExpressionPairParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.ExpressionAndExpressionPairParameter

Creates a new instance

ExpressionAndExpressionPairParameter(ExpressionAndExpressionPairParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.ExpressionAndExpressionPairParameter

Creates a copy

ExpressionAndExpressionPairParameter.List - Class in org.hkijena.jipipe.plugins.parameters.library.pairs

A collection of multiple ExpressionAndExpressionPairParameter

ExpressionBuilderInserterUI - Class in org.hkijena.jipipe.plugins.expressions.ui

ExpressionBuilderInserterUI(ExpressionBuilderUI, Object) - Constructor for class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderInserterUI

ExpressionBuilderParameterUI - Class in org.hkijena.jipipe.plugins.expressions.ui

A parameter UI for the expression builder.

ExpressionBuilderParameterUI() - Constructor for class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderParameterUI

ExpressionBuilderParameterUI.Mode - Enum in org.hkijena.jipipe.plugins.expressions.ui

ExpressionBuilderSyntaxChecker - Class in org.hkijena.jipipe.plugins.expressions.ui

ExpressionBuilderSyntaxChecker(RSyntaxTextArea) - Constructor for class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderSyntaxChecker

ExpressionBuilderUI - Class in org.hkijena.jipipe.plugins.expressions.ui

ExpressionBuilderUI(JIPipeDesktopWorkbench, String, Set<JIPipeExpressionParameterVariableInfo>) - Constructor for class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderUI

ExpressionBuilderUI.EntryRankingFunction - Class in org.hkijena.jipipe.plugins.expressions.ui

ExpressionBuilderUI.EntryRenderer - Class in org.hkijena.jipipe.plugins.expressions.ui

ExpressionBuilderUI.EntryToStringFunction - Class in org.hkijena.jipipe.plugins.expressions.ui

ExpressionConstant - Class in org.hkijena.jipipe.plugins.expressions

ExpressionConstant(String, Object) - Constructor for class org.hkijena.jipipe.plugins.expressions.ExpressionConstant

ExpressionConstantEntry - Class in org.hkijena.jipipe.plugins.expressions

Organizes Operator instances and puts them together with a name and description

ExpressionConstantEntry(Constant) - Constructor for class org.hkijena.jipipe.plugins.expressions.ExpressionConstantEntry

ExpressionConstantEntry(String, String, Constant) - Constructor for class org.hkijena.jipipe.plugins.expressions.ExpressionConstantEntry

ExpressionEvaluator - Class in org.hkijena.jipipe.plugins.expressions

The base class for an evaluator

ExpressionEvaluator(Parameters) - Constructor for class org.hkijena.jipipe.plugins.expressions.ExpressionEvaluator

Constructor.

ExpressionFunction - Class in org.hkijena.jipipe.plugins.expressions

Function that can be utilized in JIPipeExpressionEvaluator.

ExpressionFunction(String, int) - Constructor for class org.hkijena.jipipe.plugins.expressions.ExpressionFunction

ExpressionFunction(String, int, int) - Constructor for class org.hkijena.jipipe.plugins.expressions.ExpressionFunction

ExpressionFunctionEntry(String, String, String, ExpressionFunction) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ExpressionFunctionEntry

ExpressionFunctionRenderer() - Constructor for class org.hkijena.jipipe.plugins.expressions.FunctionSelectorList.ExpressionFunctionRenderer

ExpressionOperator - Class in org.hkijena.jipipe.plugins.expressions

ExpressionOperator(String, int, Operator.Associativity, int) - Constructor for class org.hkijena.jipipe.plugins.expressions.ExpressionOperator

ExpressionOperatorEntry - Class in org.hkijena.jipipe.plugins.expressions

Organizes Operator instances and puts them together with a name and description

ExpressionOperatorEntry(Operator) - Constructor for class org.hkijena.jipipe.plugins.expressions.ExpressionOperatorEntry

ExpressionOperatorEntry(String, String, Operator) - Constructor for class org.hkijena.jipipe.plugins.expressions.ExpressionOperatorEntry

ExpressionOperatorRenderer() - Constructor for class org.hkijena.jipipe.plugins.expressions.OperatorSelectorList.ExpressionOperatorRenderer

ExpressionPlugin - Class in org.hkijena.jipipe.plugins.expressions

ExpressionPlugin() - Constructor for class org.hkijena.jipipe.plugins.expressions.ExpressionPlugin

ExpressionSequenceFunction - Class in org.hkijena.jipipe.plugins.expressions.functions

ExpressionSequenceFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.ExpressionSequenceFunction

ExpressionSlicerAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

ExpressionSlicerAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

ExpressionSlicerAlgorithm(ExpressionSlicerAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

ExpressionTableColumnGeneratorProcessor - Class in org.hkijena.jipipe.plugins.tables.parameters.processors

Processor-like parameter that maps a column generator to a string

ExpressionTableColumnGeneratorProcessor() - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.processors.ExpressionTableColumnGeneratorProcessor

Creates a new instance

ExpressionTableColumnGeneratorProcessor(String, String) - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.processors.ExpressionTableColumnGeneratorProcessor

ExpressionTableColumnGeneratorProcessor(ExpressionTableColumnGeneratorProcessor) - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.processors.ExpressionTableColumnGeneratorProcessor

Creates a copy

ExpressionTableColumnGeneratorProcessorParameterList - Class in org.hkijena.jipipe.plugins.tables.parameters.collections

ExpressionTableColumnGeneratorProcessorParameterList() - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.collections.ExpressionTableColumnGeneratorProcessorParameterList

Creates a new instance

ExpressionTableColumnGeneratorProcessorParameterList(ExpressionTableColumnGeneratorProcessorParameterList) - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.collections.ExpressionTableColumnGeneratorProcessorParameterList

Creates a copy

ExpressionTableColumnProcessorParameter - Class in org.hkijena.jipipe.plugins.tables.parameters.processors

A parameter that models processing an input column via an conversion function and generating an output column

ExpressionTableColumnProcessorParameter() - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.processors.ExpressionTableColumnProcessorParameter

ExpressionTableColumnProcessorParameter(ExpressionTableColumnProcessorParameter) - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.processors.ExpressionTableColumnProcessorParameter

ExpressionTableColumnProcessorParameterList - Class in org.hkijena.jipipe.plugins.tables.parameters.collections

ExpressionTableColumnProcessorParameterList() - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.collections.ExpressionTableColumnProcessorParameterList

Creates a new instance

ExpressionTableColumnProcessorParameterList(ExpressionTableColumnProcessorParameterList) - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.collections.ExpressionTableColumnProcessorParameterList

Creates a copy

ExpressionTesterJIPipeDesktopMenuExtension - Class in org.hkijena.jipipe.plugins.parameters

Adds an entry "New table" to the JIPipe menu

ExpressionTesterJIPipeDesktopMenuExtension(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.parameters.ExpressionTesterJIPipeDesktopMenuExtension

Creates a new instance

ExpressionTesterUI - Class in org.hkijena.jipipe.utils.ui

A developer tool to test JIPipeExpressionEvaluator

ExpressionTesterUI(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.utils.ui.ExpressionTesterUI

ExpressionVariableRenderer() - Constructor for class org.hkijena.jipipe.plugins.expressions.VariableSelectorList.ExpressionVariableRenderer

ExtendedExecutor(long, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.utils.ProcessUtils.ExtendedExecutor

ExtendedMaxima2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

ExtendedMaxima2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMaxima2DAlgorithm

Instantiates a new node type.

ExtendedMaxima2DAlgorithm(ExtendedMaxima2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMaxima2DAlgorithm

Instantiates a new node type.

ExtendedMaxima3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

ExtendedMaxima3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMaxima3DAlgorithm

Instantiates a new node type.

ExtendedMaxima3DAlgorithm(ExtendedMaxima3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMaxima3DAlgorithm

Instantiates a new node type.

ExtendedMinima2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

ExtendedMinima2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMinima2DAlgorithm

Instantiates a new node type.

ExtendedMinima2DAlgorithm(ExtendedMinima2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMinima2DAlgorithm

Instantiates a new node type.

ExtendedMinima3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

ExtendedMinima3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMinima3DAlgorithm

Instantiates a new node type.

ExtendedMinima3DAlgorithm(ExtendedMinima3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMinima3DAlgorithm

Instantiates a new node type.

ExtendedObject3DVoxels - Class in org.hkijena.jipipe.plugins.ij3d.utils

Extended version of Object3DVoxels that comes with some additional loading methods

ExtendedObject3DVoxels() - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ExtendedObject3DVoxels

ExtendedObject3DVoxels(int) - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ExtendedObject3DVoxels

ExtendedObject3DVoxels(ImageHandler, int) - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ExtendedObject3DVoxels

ExtendedObject3DVoxels(ImageHandler) - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ExtendedObject3DVoxels

ExtendedObject3DVoxels(ImageHandler, ImageHandler) - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ExtendedObject3DVoxels

ExtendedObject3DVoxels(ImagePlus, int) - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ExtendedObject3DVoxels

ExtendedObject3DVoxels(ImageStack, int) - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ExtendedObject3DVoxels

ExtendedObject3DVoxels(List<Voxel3D>) - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ExtendedObject3DVoxels

ExtendedObject3DVoxels(Object3DVoxels) - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ExtendedObject3DVoxels

ExtendedObject3DVoxels(Object3D) - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ExtendedObject3DVoxels

ExtendedObjectCreator3D - Class in org.hkijena.jipipe.plugins.ij3d.utils

ExtendedObjectCreator3D(ImageHandler) - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ExtendedObjectCreator3D

ExtendedObjectCreator3D(ImageStack) - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ExtendedObjectCreator3D

ExtendedObjectCreator3D(int, int, int) - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ExtendedObjectCreator3D

extendLine(Point, Point, Dimension) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.HoughLineSegments

EXTENSION_FILTER_ARCHIVE - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_AVI - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_BMP - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_CSV - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_HDF5 - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_HTML - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_IMAGEIO_IMAGES - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_JIP - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_JIPC - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_JIPE - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_JPEG - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_JSON - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_MD - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_OME_TIFF - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_PDF - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_PNG - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_ROI - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_ROI_ZIP - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_ROIS - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_SVG - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_TAR_GZ - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_TIFF - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_TSV - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_TXT - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_XLSX - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_ZARR_ZIP - Static variable in class org.hkijena.jipipe.utils.UIUtils

EXTENSION_FILTER_ZIP - Static variable in class org.hkijena.jipipe.utils.UIUtils

ExtensionContentAddedEvent(JIPipeJsonPlugin, Object) - Constructor for class org.hkijena.jipipe.JIPipeService.ExtensionContentAddedEvent

ExtensionContentAddedEventEmitter() - Constructor for class org.hkijena.jipipe.JIPipeService.ExtensionContentAddedEventEmitter

ExtensionContentRemovedEvent(JIPipeJsonPlugin, Object) - Constructor for class org.hkijena.jipipe.JIPipeService.ExtensionContentRemovedEvent

ExtensionContentRemovedEventEmitter() - Constructor for class org.hkijena.jipipe.JIPipeService.ExtensionContentRemovedEventEmitter

ExtensionDiscoveredEvent(JIPipe, JIPipeDependency) - Constructor for class org.hkijena.jipipe.JIPipeService.ExtensionDiscoveredEvent

ExtensionDiscoveredEventEmitter() - Constructor for class org.hkijena.jipipe.JIPipeService.ExtensionDiscoveredEventEmitter

ExtensionRegisteredEvent(JIPipeService, JIPipeDependency) - Constructor for class org.hkijena.jipipe.JIPipeService.ExtensionRegisteredEvent

ExtensionRegisteredEventEmitter() - Constructor for class org.hkijena.jipipe.JIPipeService.ExtensionRegisteredEventEmitter

ExternalEditor(JIPipeDesktopWorkbench, WeakReference<JIPipeParameterCollection>, String, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI.ExternalEditor

ExternalEnvironmentInfo - Annotation Type in org.hkijena.jipipe.api.environments

ExternalEnvironmentParameterSettings - Annotation Type in org.hkijena.jipipe.api.environments

Can be attached to control the UI of

ExternalFileExternalEditor(JIPipeDesktopWorkbench, WeakReference<JIPipeParameterCollection>, String, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI.ExternalFileExternalEditor

extract(Collection<JIPipeGraphNode>, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Copies the selected algorithms into a new graph Connections between the nodes are kept UUIDs are kept

extract(Collection<JIPipeGraphNode>, boolean, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Copies the selected algorithms into a new graph Connections between the nodes are kept UUIDs are kept

extractAlpha(BufferedImage) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils

ExtractAndReplaceAnnotation - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Generates annotations from filenames

ExtractAndReplaceAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractAndReplaceAnnotation

New instance

ExtractAndReplaceAnnotation(ExtractAndReplaceAnnotation) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractAndReplaceAnnotation

Copies the algorithm

extractAnnotationsFromPython(PyDictionary) - Static method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

Sets annotations from a Python dictionary

extractCellposeOutputs(JIPipeMultiIterationStep, JIPipeProgressInfo, Path, Path, Path, Path, Path, List<JIPipeTextAnnotation>, CellposeSegmentationOutputSettings_Old) - Static method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

extractCTStack(ImagePlus, int, int) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

ExtractDataAnnotation - Class in org.hkijena.jipipe.plugins.annotation.algorithms

ExtractDataAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractDataAnnotation

ExtractDataAnnotation(ExtractDataAnnotation) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractDataAnnotation

extractDeepCopy(Set<FilamentVertex>) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

Extracts a deep copy of the nodes end edges that only contains the selected vertices

extractFilaments(ResultsTableData, int, boolean, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ijfilaments.util.TSOAXUtils

ExtractFileName - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Applies subfolder navigation to each input folder

ExtractFileName(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExtractFileName

ExtractFileName(ExtractFileName) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExtractFileName

Copies the algorithm

extractFromProcessor(ImageProcessor, Rectangle) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

ExtractFromROIAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble

ExtractFromROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

ExtractFromROIAlgorithm(ExtractFromROIAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

extractHarris(GroupImage, OrientationParameters, ImageSliceIndex, ResultsTableData, ROI2DListData) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

extractImageFromInfo(CellposeImageInfo, Path, String, boolean, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.cellpose.utils.CellposeUtils

ExtractImageInRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert

ExtractImageInRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

ExtractImageInRoiAlgorithm(ExtractImageInRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

ExtractImageMetadataAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata

ExtractImageMetadataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata.ExtractImageMetadataAlgorithm

ExtractImageMetadataAlgorithm(ExtractImageMetadataAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata.ExtractImageMetadataAlgorithm

ExtractJsonDataAsTableAlgorithm - Class in org.hkijena.jipipe.plugins.strings.nodes.json

ExtractJsonDataAsTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.json.ExtractJsonDataAsTableAlgorithm

ExtractJsonDataAsTableAlgorithm(ExtractJsonDataAsTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.json.ExtractJsonDataAsTableAlgorithm

ExtractJsonDataAsTableAlgorithm.Entry - Class in org.hkijena.jipipe.plugins.strings.nodes.json

ExtractLabelStatisticsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

ExtractLabelStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ExtractLabelStatisticsAlgorithm

ExtractLabelStatisticsAlgorithm(ExtractLabelStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ExtractLabelStatisticsAlgorithm

extractLoopGroups(Set<JIPipeGraphNode>, Set<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Converts loop structures into equivalent group nodes Please note that nested loops will be put into the group; only order 1 loops will be converted.

extractMergedAnnotations(String) - Static method in enum org.hkijena.jipipe.api.annotation.JIPipeTextAnnotationMergeMode

Extracts merged annotations

ExtractOMEROIAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome

ExtractOMEROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.ExtractOMEROIAlgorithm

ExtractOMEROIAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.ExtractOMEROIAlgorithm

ExtractOMEXMLAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome

ExtractOMEXMLAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.ExtractOMEXMLAlgorithm

ExtractOMEXMLAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.ExtractOMEXMLAlgorithm

extractOutputs(JIPipeSingleIterationStep, Map<String, Path>, List<JIPipeOutputDataSlot>, JIPipeTextAnnotationMergeMode, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

extractOutputs(JIPipeMultiIterationStep, Map<String, Path>, List<JIPipeOutputDataSlot>, JIPipeTextAnnotationMergeMode, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

extractOutputs(Map<String, Path>, List<JIPipeOutputDataSlot>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

ExtractOverlay3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.overlay

ExtractOverlay3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.overlay.ExtractOverlay3DAlgorithm

ExtractOverlay3DAlgorithm(ExtractOverlay3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.overlay.ExtractOverlay3DAlgorithm

ExtractOverlayAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay

ExtractOverlayAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.ExtractOverlayAlgorithm

ExtractOverlayAlgorithm(ExtractOverlayAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.ExtractOverlayAlgorithm

extractOverlaysOfType(Class<T>) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

ExtractParametersAlgorithm - Class in org.hkijena.jipipe.plugins.multiparameters.nodes

ExtractParametersAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.ExtractParametersAlgorithm

ExtractParametersAlgorithm(ExtractParametersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.ExtractParametersAlgorithm

ExtractParent - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Applies subfolder navigation to each input folder

ExtractParent(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExtractParent

ExtractParent(ExtractParent) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExtractParent

Copies the algorithm

ExtractRegexMatchesFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

ExtractRegexMatchesFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.ExtractRegexMatchesFunction

extractRestoredAnnotations(JIPipeMultiIterationStep, Map<String, JIPipeTextAnnotation>, JIPipeDataSlot, int, List<JIPipeTextAnnotation>) - Static method in class org.hkijena.jipipe.plugins.forms.algorithms.IteratingFormProcessorAlgorithm

Extracts original annotations into the annotation list

ExtractRoi2DFromOMEImageAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms

Loads ROI data from a file via IJ.openFile()

ExtractRoi2DFromOMEImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.ExtractRoi2DFromOMEImageAlgorithm

ExtractRoi2DFromOMEImageAlgorithm(ExtractRoi2DFromOMEImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.ExtractRoi2DFromOMEImageAlgorithm

Copies the algorithm

ExtractRoi2DRelationStatisticsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure

ExtractRoi2DRelationStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm

ExtractRoi2DRelationStatisticsAlgorithm(ExtractRoi2DRelationStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm

ExtractROI3DMetadataAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata

ExtractROI3DMetadataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.ExtractROI3DMetadataAlgorithm

ExtractROI3DMetadataAlgorithm(ExtractROI3DMetadataAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.ExtractROI3DMetadataAlgorithm

ExtractRoi3DRelationStatisticsAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure

ExtractRoi3DRelationStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm

ExtractRoi3DRelationStatisticsAlgorithm(ExtractRoi3DRelationStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm

ExtractRoi3DStatisticsAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure

ExtractRoi3DStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DStatisticsAlgorithm

ExtractRoi3DStatisticsAlgorithm(ExtractRoi3DStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DStatisticsAlgorithm

extractROIFromInfo(CellposeImageInfo, Path) - Static method in class org.hkijena.jipipe.plugins.cellpose.utils.CellposeUtils

ExtractROIMetadataAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties

ExtractROIMetadataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.ExtractROIMetadataAlgorithm

ExtractROIMetadataAlgorithm(ExtractROIMetadataAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.ExtractROIMetadataAlgorithm

ExtractROIProfileAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure

ExtractROIProfileAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractROIProfileAlgorithm

ExtractROIProfileAlgorithm(ExtractROIProfileAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractROIProfileAlgorithm

ExtractROIProfileAlgorithm.RectangleMode - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure

extractShallow(Collection<JIPipeGraphNode>, boolean, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Copies the selected algorithms into a new graph Connections between the nodes are kept UUIDs are kept Nodes are copied shallow

extractShallowCopy(Set<FilamentVertex>) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

Extracts a shallow copy of the nodes end edges that only contains the selected vertices

extractStringFromXPath(Document, String, Map<String, String>) - Static method in class org.hkijena.jipipe.utils.xml.XmlUtils

extractStringListFromXPath(Document, String, Map<String, String>) - Static method in class org.hkijena.jipipe.utils.xml.XmlUtils

ExtractTableAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms.datatable

ExtractTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.datatable.ExtractTableAlgorithm

ExtractTableAlgorithm(ExtractTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.datatable.ExtractTableAlgorithm

ExtractTextFromJsonAlgorithm - Class in org.hkijena.jipipe.plugins.strings.nodes.json

ExtractTextFromJsonAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.json.ExtractTextFromJsonAlgorithm

ExtractTextFromJsonAlgorithm(ExtractTextFromJsonAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.json.ExtractTextFromJsonAlgorithm

ExtractTextFromXMLAlgorithm - Class in org.hkijena.jipipe.plugins.strings.nodes.xml

ExtractTextFromXMLAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractTextFromXMLAlgorithm

ExtractTextFromXMLAlgorithm(ExtractTextFromXMLAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractTextFromXMLAlgorithm

extractTHyperStack(ImagePlus, int) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

extractValues(JIPipeExpressionVariablesMap, ImagePlus, Collection<JIPipeTextAnnotation>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImagePlusPropertiesExpressionParameterVariablesInfo

extractVectorField(GroupImage, OrientationParameters, ROI2DListData, ResultsTableData, ImageSliceIndex) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm

ExtractXPathDataAsTableAlgorithm - Class in org.hkijena.jipipe.plugins.strings.nodes.xml

ExtractXPathDataAsTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm

ExtractXPathDataAsTableAlgorithm(ExtractXPathDataAsTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm

ExtractXPathDataAsTableAlgorithm.Entry - Class in org.hkijena.jipipe.plugins.strings.nodes.xml

extractZTStack(ImagePlus, int, int) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

F

FactorizeColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Converts each entry into a factor

FactorizeColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.FactorizeColumnOperation

FALLBACK_VERSION - Static variable in class org.hkijena.jipipe.utils.VersionUtils

FalseColorsFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.color

FalseColorsFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.color.FalseColorsFunction

Fast3DFiltersAdaptiveAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.filters

Fast3DFiltersAdaptiveAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersAdaptiveAlgorithm

Fast3DFiltersAdaptiveAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersAdaptiveAlgorithm

Fast3DFiltersAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.filters

Fast3DFiltersAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersAlgorithm

Fast3DFiltersAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersAlgorithm

Fast3DFiltersCloseAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.filters

Fast3DFiltersCloseAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersCloseAlgorithm

Fast3DFiltersCloseAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersCloseAlgorithm

Fast3DFiltersLocalMaxAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.filters

Fast3DFiltersLocalMaxAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersLocalMaxAlgorithm

Fast3DFiltersLocalMaxAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersLocalMaxAlgorithm

Fast3DFiltersMaxAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.filters

Fast3DFiltersMaxAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersMaxAlgorithm

Fast3DFiltersMaxAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersMaxAlgorithm

Fast3DFiltersMeanAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.filters

Fast3DFiltersMeanAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersMeanAlgorithm

Fast3DFiltersMeanAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersMeanAlgorithm

Fast3DFiltersMedianAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.filters

Fast3DFiltersMedianAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersMedianAlgorithm

Fast3DFiltersMedianAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersMedianAlgorithm

Fast3DFiltersMinAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.filters

Fast3DFiltersMinAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersMinAlgorithm

Fast3DFiltersMinAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersMinAlgorithm

Fast3DFiltersOpenAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.filters

Fast3DFiltersOpenAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersOpenAlgorithm

Fast3DFiltersOpenAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersOpenAlgorithm

Fast3DFiltersSobelAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.filters

Fast3DFiltersSobelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersSobelAlgorithm

Fast3DFiltersSobelAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersSobelAlgorithm

Fast3DFiltersTopHatAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.filters

Fast3DFiltersTopHatAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersTopHatAlgorithm

Fast3DFiltersTopHatAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersTopHatAlgorithm

Fast3DFiltersVarianceAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.filters

Fast3DFiltersVarianceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersVarianceAlgorithm

Fast3DFiltersVarianceAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersVarianceAlgorithm

FastCircularHoughSegmentation2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect

Segments using a Hough circle transform This code is based on ...

FastCircularHoughSegmentation2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.FastCircularHoughSegmentation2DAlgorithm

FastCircularHoughSegmentation2DAlgorithm(FastCircularHoughSegmentation2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.FastCircularHoughSegmentation2DAlgorithm

FastImageArithmeticsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

FastImageArithmeticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.FastImageArithmeticsAlgorithm

FastImageArithmeticsAlgorithm(FastImageArithmeticsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.FastImageArithmeticsAlgorithm

FastImageArithmeticsAlgorithm.FastImageArithmeticsTokenMaker - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

FastImageArithmeticsTokenMaker() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.FastImageArithmeticsAlgorithm.FastImageArithmeticsTokenMaker

FastKeyValueThresholdStatisticsGenerator - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics

FastKeyValueThresholdStatisticsGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator

FastKeyValueThresholdStatisticsGenerator(FastKeyValueThresholdStatisticsGenerator) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator

fatal(Object, String) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROToJIPipeLogger

fatal(Object, LogMessage) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROToJIPipeLogger

FEATURE_DECIMAL_FORMAT - Static variable in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackMateUtils

FFT2DForwardTransform - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft

Applies a FFT forward transformation

FFT2DForwardTransform(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFT2DForwardTransform

Creates a new instance

FFT2DForwardTransform(FFT2DForwardTransform) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFT2DForwardTransform

Creates a copy

FFT2DInverseTransform - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft

Applies a FFT forward transformation

FFT2DInverseTransform(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFT2DInverseTransform

Creates a new instance

FFT2DInverseTransform(FFT2DInverseTransform) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFT2DInverseTransform

Creates a copy

FFT2DSwapQuadrants - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft

Applies a FFT forward transformation

FFT2DSwapQuadrants(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFT2DSwapQuadrants

Creates a new instance

FFT2DSwapQuadrants(FFT2DSwapQuadrants) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFT2DSwapQuadrants

Creates a copy

FFTBandPassFilter - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft

FFTBandPassFilter(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter

FFTBandPassFilter(FFTBandPassFilter) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter

FFTBandPassFilter.SuppressStripesMode - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft

FFTCustomFilter - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft

FFTCustomFilter(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTCustomFilter

FFTCustomFilter(JIPipeIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTCustomFilter

FFTImageData - Interface in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft

Annotates an image as FFT image

FFTInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo

FFTInfo(FHT) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo

FilamentComponentVariablesInfo - Class in org.hkijena.jipipe.plugins.ijfilaments.util

FilamentComponentVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentComponentVariablesInfo

FilamentCyclesToComponentsAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

FilamentCyclesToComponentsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FilamentCyclesToComponentsAlgorithm

FilamentCyclesToComponentsAlgorithm(FilamentCyclesToComponentsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FilamentCyclesToComponentsAlgorithm

FilamentEdge - Class in org.hkijena.jipipe.plugins.ijfilaments.util

FilamentEdge() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentEdge

FilamentEdge(FilamentEdge) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentEdge

FilamentEdgeMetadataEntry - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.utils

FilamentEdgeMetadataEntry() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.utils.FilamentEdgeMetadataEntry

FilamentEdgeVariablesInfo - Class in org.hkijena.jipipe.plugins.ijfilaments.util

FilamentEdgeVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentEdgeVariablesInfo

FilamentEndpointsVariablesInfo - Class in org.hkijena.jipipe.plugins.ijfilaments.util

FilamentEndpointsVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentEndpointsVariablesInfo

FilamentListCellRenderer - Class in org.hkijena.jipipe.plugins.ijfilaments.display

FilamentListCellRenderer() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentListCellRenderer

Filaments3DGraphData - Class in org.hkijena.jipipe.plugins.ijfilaments.datatypes

Filaments3DGraphData() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

Filaments3DGraphData(Filaments3DGraphData) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

Filaments3DGraphDataViewer - Class in org.hkijena.jipipe.plugins.ijfilaments.viewers

Filaments3DGraphDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.viewers.Filaments3DGraphDataViewer

FilamentsDataDeserializer - Class in org.hkijena.jipipe.plugins.ijfilaments.util

FilamentsDataDeserializer() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDataDeserializer

FilamentsDataSerializer - Class in org.hkijena.jipipe.plugins.ijfilaments.util

FilamentsDataSerializer() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDataSerializer

FilamentsDrawer - Class in org.hkijena.jipipe.plugins.ijfilaments.util

FilamentsDrawer() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

FilamentsDrawer(FilamentsDrawer) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

FilamentsManagerPlugin2D - Class in org.hkijena.jipipe.plugins.ijfilaments.display

FilamentsManagerPlugin2D(JIPipeDesktopLegacyImageViewer) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

FilamentsManagerPlugin2D.SelectionContextPanel - Class in org.hkijena.jipipe.plugins.ijfilaments.display

FilamentsManagerPlugin2D.SelectionInfoContextPanel - Class in org.hkijena.jipipe.plugins.ijfilaments.display

FilamentsNodeTypeCategory - Class in org.hkijena.jipipe.plugins.ijfilaments

FilamentsNodeTypeCategory() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.FilamentsNodeTypeCategory

FilamentsPlugin - Class in org.hkijena.jipipe.plugins.ijfilaments

Extension that adds filaments supports

FilamentsPlugin() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.FilamentsPlugin

FilamentsPluginProjectSettings - Class in org.hkijena.jipipe.plugins.ijfilaments.settings

FilamentsPluginProjectSettings() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.settings.FilamentsPluginProjectSettings

FilamentsToRoi3dDataTypeConverter - Class in org.hkijena.jipipe.plugins.ijfilaments.datatypes

FilamentsToRoi3dDataTypeConverter() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.datatypes.FilamentsToRoi3dDataTypeConverter

FilamentsToRoiDataTypeConverter - Class in org.hkijena.jipipe.plugins.ijfilaments.datatypes

FilamentsToRoiDataTypeConverter() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.datatypes.FilamentsToRoiDataTypeConverter

FilamentsVertexMetadataEntry - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.utils

FilamentsVertexMetadataEntry() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.utils.FilamentsVertexMetadataEntry

FilamentUnconnectedEdgeVariablesInfo - Class in org.hkijena.jipipe.plugins.ijfilaments.util

FilamentUnconnectedEdgeVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentUnconnectedEdgeVariablesInfo

FilamentVertex - Class in org.hkijena.jipipe.plugins.ijfilaments.util

FilamentVertex() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

FilamentVertex(FilamentVertex) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

FilamentVertexVariablesInfo - Class in org.hkijena.jipipe.plugins.ijfilaments.util

FilamentVertexVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertexVariablesInfo

FileChooserBookmark - Class in org.hkijena.jipipe.plugins.parameters.library.filesystem

FileChooserBookmark() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.filesystem.FileChooserBookmark

FileChooserBookmark(String, Path) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.filesystem.FileChooserBookmark

FileChooserBookmark(FileChooserBookmark) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.filesystem.FileChooserBookmark

FileChooserBookmarkList - Class in org.hkijena.jipipe.plugins.parameters.library.filesystem

FileChooserBookmarkList() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.filesystem.FileChooserBookmarkList

FileChooserBookmarkList(FileChooserBookmarkList) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.filesystem.FileChooserBookmarkList

FileChooserComponent() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser.FileChooserComponent

FileChooserComponentUI(JFileChooser) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser.FileChooserComponentUI

FileChooserHistory - Class in org.hkijena.jipipe.desktop.commons.components.filechoosernext

FileChooserHistory() - Constructor for class org.hkijena.jipipe.desktop.commons.components.filechoosernext.FileChooserHistory

FileData - Class in org.hkijena.jipipe.plugins.filesystem.dataypes

Data containing a file

FileData(Path) - Constructor for class org.hkijena.jipipe.plugins.filesystem.dataypes.FileData

FileData(String) - Constructor for class org.hkijena.jipipe.plugins.filesystem.dataypes.FileData

FileDataSource - Class in org.hkijena.jipipe.plugins.filesystem.datasources

Provides an input file

FileDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.FileDataSource

Initializes the algorithm

FileDataSource(FileDataSource) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.FileDataSource

Copies the algorithm

FileDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.filesystem

Editor for a File parameter

FileDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.filesystem.FileDesktopParameterEditorUI

FileImageJDataExporterUI - Class in org.hkijena.jipipe.api.compat.ui

FileImageJDataExporterUI(JIPipeDesktopWorkbench, ImageJDataExportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ui.FileImageJDataExporterUI

FileImageJDataImporterUI - Class in org.hkijena.jipipe.api.compat.ui

FileImageJDataImporterUI(JIPipeDesktopWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ui.FileImageJDataImporterUI

FileListDataSource - Class in org.hkijena.jipipe.plugins.filesystem.datasources

Provides an input file

FileListDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.FileListDataSource

Initializes the algorithm

FileListDataSource(FileListDataSource) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.FileListDataSource

Copies the algorithm

FileLocker - Class in org.hkijena.jipipe.utils

FileLocker(JIPipeProgressInfo, Path) - Constructor for class org.hkijena.jipipe.utils.FileLocker

FileNameExtensionsFilterListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.filechoosernext

FileNameExtensionsFilterListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.filechoosernext.FileNameExtensionsFilterListCellRenderer

FilePathDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.filesystem

Editor for a Path parameter

FilePathDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.filesystem.FilePathDesktopParameterEditorUI

FilesystemDataSlotPreview - Class in org.hkijena.jipipe.plugins.filesystem.resultanalysis

Renders filesystem data as table cell

FilesystemDataSlotPreview(JIPipeDesktopProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableRowInfo, JIPipeDataAnnotationInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.resultanalysis.FilesystemDataSlotPreview

Creates a new renderer

FileSystemNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories

FileSystemNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory

FilesystemPlugin - Class in org.hkijena.jipipe.plugins.filesystem

Extension that provides filesystem data types

FilesystemPlugin() - Constructor for class org.hkijena.jipipe.plugins.filesystem.FilesystemPlugin

FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory

FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory

FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory

FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory

FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory

FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory

FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory

FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory

FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory

FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory

FILL_COLOR - Static variable in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsNodeTypeCategory

FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory

FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory

FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory

FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory

FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory

FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory

FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory

FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory

FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory

FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory

FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsNodeTypeCategory

fillClosestPixel(ImageProcessor, ImageProcessor) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ContentAwareFill

Simple content-aware fill that just takes the closest pixel

fillMean(ImageProcessor, ImageProcessor) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ContentAwareFill

fillMedian(ImageProcessor, ImageProcessor) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ContentAwareFill

fillPaintIndex - Variable in class org.hkijena.jipipe.plugins.plots.utils.ColorMapSupplier

filter(BiPredicate<JIPipeDataTable, Integer>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Creates a new instance that contains the filtered items.

filter(Filaments3DGraphData, Set<FilamentEdge>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.ijfilaments.parameters.EdgeMaskParameter

filter(OptionalJIPipeExpressionParameter, Filaments3DGraphData, Set<FilamentVertex>, JIPipeExpressionVariablesMap) - Static method in class org.hkijena.jipipe.plugins.ijfilaments.parameters.VertexMaskParameter

filterAlgorithmsList(Collection<? extends JIPipeGraphNode>) - Static method in class org.hkijena.jipipe.utils.JIPipeUtils

FilterAndMergeRoiByStatisticsScriptAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge

Wrapper around RoiManager

FilterAndMergeRoiByStatisticsScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge.FilterAndMergeRoiByStatisticsScriptAlgorithm

Instantiates a new node type.

FilterAndMergeRoiByStatisticsScriptAlgorithm(FilterAndMergeRoiByStatisticsScriptAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge.FilterAndMergeRoiByStatisticsScriptAlgorithm

Instantiates a new node type.

filterArray(float[], boolean[], boolean) - Static method in class org.hkijena.jipipe.plugins.scene3d.utils.Scene3DUtils

FilterByAnnotation - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Algorithm that splits the input data by a specified annotation

FilterByAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.FilterByAnnotation

FilterByAnnotation(FilterByAnnotation) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.FilterByAnnotation

Copies the algorithm

FilterByAnnotationIfElse - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Algorithm that splits the input data by a specified annotation

FilterByAnnotationIfElse(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.FilterByAnnotationIfElse

FilterByAnnotationIfElse(FilterByAnnotationIfElse) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.FilterByAnnotationIfElse

Copies the algorithm

filteredForFrameAndChannel(int, int) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

FilterFilamentEdgesByProperties - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.filter

FilterFilamentEdgesByProperties(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.FilterFilamentEdgesByProperties

FilterFilamentEdgesByProperties(FilterFilamentEdgesByProperties) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.FilterFilamentEdgesByProperties

FilterFilamentsByProperties - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.filter

FilterFilamentsByProperties(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.FilterFilamentsByProperties

FilterFilamentsByProperties(FilterFilamentsByProperties) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.FilterFilamentsByProperties

FilterFilamentVerticesByProperties - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.filter

FilterFilamentVerticesByProperties(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.FilterFilamentVerticesByProperties

FilterFilamentVerticesByProperties(FilterFilamentVerticesByProperties) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.FilterFilamentVerticesByProperties

FilteringParameters() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.FilteringParameters

FilteringParameters(IterativeThresholdByROIStatistics2DAlgorithm.FilteringParameters) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.FilteringParameters

FilterLabelsByExpression2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter

FilterLabelsByExpression2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression2DAlgorithm

FilterLabelsByExpression2DAlgorithm(FilterLabelsByExpression2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression2DAlgorithm

FilterLabelsByExpression2DAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter

FilterLabelsByExpression3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter

FilterLabelsByExpression3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression3DAlgorithm

FilterLabelsByExpression3DAlgorithm(FilterLabelsByExpression3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression3DAlgorithm

FilterLabelsByExpression3DAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter

FilterLabelsByIdAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter

FilterLabelsByIdAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByIdAlgorithm

FilterLabelsByIdAlgorithm(FilterLabelsByIdAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByIdAlgorithm

FilterLabelsByMaskAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter

FilterLabelsByMaskAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByMaskAlgorithm

FilterLabelsByMaskAlgorithm(FilterLabelsByMaskAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByMaskAlgorithm

FilterLabelsByOverlapAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter

FilterLabelsByOverlapAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm

FilterLabelsByOverlapAlgorithm(FilterLabelsByOverlapAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm

FilterLabelsByOverlapAlgorithm.LabelFilterSettings - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter

FilterLabelsByStatisticsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter

Wrapper around RoiManager

FilterLabelsByStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm

Instantiates a new node type.

FilterLabelsByStatisticsAlgorithm(FilterLabelsByStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm

Instantiates a new node type.

FilterLabelsByThicknessAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter

FilterLabelsByThicknessAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByThicknessAlgorithm

FilterLabelsByThicknessAlgorithm(FilterLabelsByThicknessAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByThicknessAlgorithm

filterLargeSmall(ImageProcessor, double, double, int, double) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter

FilterPaths - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Filters input files

FilterPaths(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.FilterPaths

Instantiates the algorithm

FilterPaths(FilterPaths) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.FilterPaths

Copies the algorithm

FilterRoi3DByOverlapAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter

FilterRoi3DByOverlapAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm

FilterRoi3DByOverlapAlgorithm(FilterRoi3DByOverlapAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm

FilterRoi3DByOverlapAlgorithm.ROIFilterSettings - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter

FilterRoi3DByStatisticsAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter

Wrapper around RoiManager

FilterRoi3DByStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm

Instantiates a new node type.

FilterRoi3DByStatisticsAlgorithm(FilterRoi3DByStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm

Instantiates a new node type.

FilterRoi3DListsAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter

FilterRoi3DListsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm

FilterRoi3DListsAlgorithm(FilterRoi3DListsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm

FilterRoi3DListsAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter

FilterRoiByNameAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter

Wrapper around RoiManager

FilterRoiByNameAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm

Instantiates a new node type.

FilterRoiByNameAlgorithm(FilterRoiByNameAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm

Instantiates a new node type.

FilterRoiByNameAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter

FilterROIByOverlapAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter

FilterROIByOverlapAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm

FilterROIByOverlapAlgorithm(FilterROIByOverlapAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm

FilterROIByOverlapAlgorithm.ROIFilterSettings - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter

FilterRoiByStatisticsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter

Wrapper around RoiManager

FilterRoiByStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm

Instantiates a new node type.

FilterRoiByStatisticsAlgorithm(FilterRoiByStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm

Instantiates a new node type.

FilterRoiByStatisticsScriptAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter

Wrapper around RoiManager

FilterRoiByStatisticsScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsScriptAlgorithm

Instantiates a new node type.

FilterRoiByStatisticsScriptAlgorithm(FilterRoiByStatisticsScriptAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsScriptAlgorithm

Instantiates a new node type.

FilterROIListsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter

FilterROIListsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm

FilterROIListsAlgorithm(FilterROIListsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm

FilterROIListsAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter

FilterTableRowsAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.filter

Algorithm that integrates columns

FilterTableRowsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.filter.FilterTableRowsAlgorithm

Creates a new instance

FilterTableRowsAlgorithm(FilterTableRowsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.filter.FilterTableRowsAlgorithm

Creates a copy

FilterTablesAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.filter

Algorithm that integrates columns

FilterTablesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.filter.FilterTablesAlgorithm

Creates a new instance

FilterTablesAlgorithm(FilterTablesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.filter.FilterTablesAlgorithm

Creates a copy

FilterTablesAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.tables.nodes.filter

filterTracks(Set<Integer>) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

Returns a copy of this track collection that has only the selected track IDs Please note that all spots are still present

filterVisibleROI(ROI2DListData, ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

Uses the current settings to filter ROI based on visibility within the current image index

findAnyOf(Path...) - Static method in class org.hkijena.jipipe.utils.PathUtils

Returns the first path that exists

findAvailableDatasets(String) - Method in interface org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetEntryProvider

findAvailableDatasets(String) - Method in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.HDF5DatasetEntryProvider

findById(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeMetadataRegistry

findClosest(int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegPointHandler

Set the current point as that which is closest to (x, y).

findClosestCompatibleArtifact(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry

Finds the closest compatible artifact to the provided full artifact ID.

findCompartment(String) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Finds a compartment by UUID or alias

findComponentIds() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

findCycles(Filaments3DGraphData) - Method in enum org.hkijena.jipipe.plugins.ijfilaments.parameters.CycleFinderAlgorithm

findDataTypes(Predicate<Class<?>>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Returns all JIPipeData classes that satisfy the provided predicate

findDataTypesByInterfaces(Class<?>...) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Returns all JIPipeData classes that satisfy the provided interfaces

findExtensionById(String) - Method in class org.hkijena.jipipe.JIPipe

findExtensionById(String) - Method in interface org.hkijena.jipipe.JIPipeService

findFileByExtension(String...) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage

Finds the first matching file by extension.

findFileByExtensionIn(Path, String...) - Static method in class org.hkijena.jipipe.utils.PathUtils

Finds a file in the specified folder with given extension

findFileByExtensionRecursivelyIn(Path, String...) - Static method in class org.hkijena.jipipe.utils.PathUtils

Finds a file in the specified folder with given extension

findFilesByExtension(String...) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage

Lists all file elements that have given extension.

findFilesByExtensionIn(Path, String...) - Static method in class org.hkijena.jipipe.utils.PathUtils

Finds a file in the specified folder with given extension

findFirstNodeOfType(Class<T>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

findHeight(Collection<BufferedImage>) - Static method in class org.hkijena.jipipe.plugins.imp.utils.ImpImageUtils

findHeight(Collection<opencv_core.Mat>) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

findHeight(opencv_core.MatVector) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

FindHoles2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

FindHoles2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.FindHoles2DAlgorithm

FindHoles2DAlgorithm(FindHoles2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.FindHoles2DAlgorithm

findImagesToImport(JIPipeProgressInfo, N5TreeNode, List<N5TreeNode>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ZARRUtils

FindLinearFilamentVertexOrderAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

FindLinearFilamentVertexOrderAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FindLinearFilamentVertexOrderAlgorithm

FindLinearFilamentVertexOrderAlgorithm(FindLinearFilamentVertexOrderAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FindLinearFilamentVertexOrderAlgorithm

FindMaxima3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.features

FindMaxima3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.features.FindMaxima3DAlgorithm

FindMaxima3DAlgorithm(FindMaxima3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.features.FindMaxima3DAlgorithm

findModuleIO(ModuleItem<?>, JIPipeSlotType) - Method in class org.hkijena.jipipe.plugins.imagej2.io.DefaultImageJ2JIPipeModuleIOService

findModuleIO(ModuleItem<?>, JIPipeSlotType) - Method in interface org.hkijena.jipipe.plugins.imagej2.io.ImageJ2JIPipeModuleIOService

Finds the best matching IO handler for the module item

findNChannels(Map<ImageSliceIndex, BufferedImage>) - Static method in class org.hkijena.jipipe.plugins.imp.utils.ImpImageUtils

findNChannels(Map<ImageSliceIndex, opencv_core.Mat>) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

findNewPlugins() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

Updates the list of new extensions

findNFrames(Map<ImageSliceIndex, BufferedImage>) - Static method in class org.hkijena.jipipe.plugins.imp.utils.ImpImageUtils

findNFrames(Map<ImageSliceIndex, opencv_core.Mat>) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

findNode(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Finds a node by its UUID (as string) or alias ID.

findNode(JIPipeParameterTree, JIPipeParameterAccess) - Static method in interface org.hkijena.jipipe.plugins.expressions.JIPipeExpressionVariablesInfo

Helper method that attempts to find the underlying graph node of a parameter access

findNodeGraphUIs(JIPipeDesktopWorkbench, JIPipeNodeGroup) - Static method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.groups.JIPipeDesktopNodeGroupUI

Finds open tabs

findNodeUUID(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Finds a node UUID by its UUID (as string) or alias ID.

findNSlices(Map<ImageSliceIndex, BufferedImage>) - Static method in class org.hkijena.jipipe.plugins.imp.utils.ImpImageUtils

findNSlices(Map<ImageSliceIndex, opencv_core.Mat>) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

findOpenPipelineEditorTabs(JIPipeProjectCompartment) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

Finds open JIPipeDesktopPipelineGraphEditorUI tabs

findOpenPipelineEditorTabs(UUID) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

Finds open JIPipeDesktopPipelineGraphEditorUI tabs

FindParticles2D - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze

Converts a mask to ROI and ROI measurements

FindParticles2D(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

FindParticles2D(FindParticles2D) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

Copies the algorithm

FindParticles3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate

FindParticles3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

FindParticles3DAlgorithm(FindParticles3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

findPredecessorNodeCache(JIPipeParameterTree, JIPipeParameterAccess) - Static method in interface org.hkijena.jipipe.plugins.expressions.JIPipeExpressionVariablesInfo

Helper method that attempts to find the underlying graph node of a parameter access and returns its cache if available

findRangeBounds(CategoryDataset) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Returns the range of values from the specified dataset that the renderer will require to display all the data.

findTabNameFor(Component) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Finds the tab title for the content

findTrackIds(ResultsTableData) - Static method in class org.hkijena.jipipe.plugins.ijfilaments.util.TSOAXUtils

findUnindexedNaNNormalVertices(float[], float[]) - Static method in class org.hkijena.jipipe.plugins.scene3d.utils.Scene3DUtils

findUnsatisfiedDependencies(Set<JIPipeDependency>) - Static method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

Finds all dependencies that cannot be met

findWidth(Collection<BufferedImage>) - Static method in class org.hkijena.jipipe.plugins.imp.utils.ImpImageUtils

findWidth(Collection<opencv_core.Mat>) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

findWidth(opencv_core.MatVector) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

findWorkerOf(JIPipeRunnable) - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

Finds the worker associated to the JIPipeRunnable

finish() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJLogWrapper

finish(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJLogWrapper

finishDraggingTo(int) - Method in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.CustomSplitPaneUI

FinishedEvent(JIPipeRunnableWorker) - Constructor for class org.hkijena.jipipe.api.run.JIPipeRunnable.FinishedEvent

FinishedEventEmitter() - Constructor for class org.hkijena.jipipe.api.run.JIPipeRunnable.FinishedEventEmitter

fireChangedEvent(TableModelEvent) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Fires a TableModelEvent to all listeners

fireChangedEvent(TableModelEvent) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Fires a TableModelEvent to all listeners

FirstIndexOfFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

FirstIndexOfFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.FirstIndexOfFunction

fitImageToScreen() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

fitImageToScreen() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

fitRowHeights(JTable) - Static method in class org.hkijena.jipipe.utils.UIUtils

Fits the row heights of a JTable

fitSize(int, int, int, int, double) - Method in enum org.hkijena.jipipe.utils.SizeFitMode

FixedMargin - Class in org.hkijena.jipipe.plugins.parameters.library.roi

Related to Margin, but with fixed-size objects

FixedMargin() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

Creates a new instance

FixedMargin(Rectangle) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

Creates a margin from a rectangle

FixedMargin(FixedMargin) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

Creates a copy

FixedMargin(Anchor) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

FixedMargin.List - Class in org.hkijena.jipipe.plugins.parameters.library.roi

List parameter of FixedMargin

FixedMarginEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.roi

Editor for FixedMargin

FixedMarginEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMarginEditorUI

FixedRatio(double) - Constructor for class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.FixedRatio

FixedRatio(double, boolean) - Constructor for class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.FixedRatio

FixedRatio() - Constructor for class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.FixedRatio

FixOverlapsNonBranchingAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.process

FixOverlapsNonBranchingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

FixOverlapsNonBranchingAlgorithm(FixOverlapsNonBranchingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

FixOverlapsNonBranchingAlgorithm.EdgeCandidate - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.process

flatten() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Makes all ROI visible on all stacks

FlattenFilamentsAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

FlattenFilamentsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FlattenFilamentsAlgorithm

FlattenFilamentsAlgorithm(FlattenFilamentsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FlattenFilamentsAlgorithm

FlattenRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Wrapper around RoiManager

FlattenRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.FlattenRoiAlgorithm

Instantiates a new node type.

FlattenRoiAlgorithm(FlattenRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.FlattenRoiAlgorithm

FloatArrayParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays

FloatArrayParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.FloatArrayParameterImageJ2ModuleInput

FloatArrayTableColumnData - Class in org.hkijena.jipipe.plugins.tables.datatypes

TableColumnData that contains doubles.

FloatArrayTableColumnData(float[], String) - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.FloatArrayTableColumnData

Creates a new instance

FloatConstantValueImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant

FloatConstantValueImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.FloatConstantValueImageJ2OutOfBoundsFactoryData

FloatConstantValueImageJ2OutOfBoundsFactoryData(OutOfBoundsConstantValueFactory<?, ?>) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.FloatConstantValueImageJ2OutOfBoundsFactoryData

FloatConstantValueImageJ2OutOfBoundsFactoryData(FloatConstantValueImageJ2OutOfBoundsFactoryData) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.FloatConstantValueImageJ2OutOfBoundsFactoryData

FloatList - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.list

A list of Float

FloatList() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.list.FloatList

Creates a new empty list

FloatList(FloatList) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.list.FloatList

Creates a copy

FloatNumberRangeParameter - Class in org.hkijena.jipipe.plugins.parameters.library.ranges

FloatNumberRangeParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.ranges.FloatNumberRangeParameter

FloatNumberRangeParameter(FloatNumberRangeParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.ranges.FloatNumberRangeParameter

FloatNumberRangeParameter(float, float) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.ranges.FloatNumberRangeParameter

FloatParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives

FloatParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.FloatParameterImageJ2ModuleInput

FloatParameterImageJ2ModuleOutput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives

FloatParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.FloatParameterImageJ2ModuleOutput

FloatParameterTypeInfo - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Info for Float

FloatParameterTypeInfo() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.FloatParameterTypeInfo

FloatPrimitiveParameterTypeInfo - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Info for Float

FloatPrimitiveParameterTypeInfo() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.FloatPrimitiveParameterTypeInfo

FloodFillMaskDrawer2DTool - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer

The standard mouse selection.

FloodFillMaskDrawer2DTool(MaskDrawerPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.FloodFillMaskDrawer2DTool

FloorColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a floor function

FloorColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.FloorColumnOperation

flush() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfoOutputStream

focusSearchBar() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel

FolderData - Class in org.hkijena.jipipe.plugins.filesystem.dataypes

Data that stores a folder

FolderData(Path) - Constructor for class org.hkijena.jipipe.plugins.filesystem.dataypes.FolderData

FolderData(String) - Constructor for class org.hkijena.jipipe.plugins.filesystem.dataypes.FolderData

FolderDataSource - Class in org.hkijena.jipipe.plugins.filesystem.datasources

Provides an input folder

FolderDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.FolderDataSource

Initializes the algorithm

FolderDataSource(FolderDataSource) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.FolderDataSource

Copies the algorithm

FolderImageJDataExporterUI - Class in org.hkijena.jipipe.api.compat.ui

FolderImageJDataExporterUI(JIPipeDesktopWorkbench, ImageJDataExportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ui.FolderImageJDataExporterUI

FolderImageJDataImporterUI - Class in org.hkijena.jipipe.api.compat.ui

FolderImageJDataImporterUI(JIPipeDesktopWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ui.FolderImageJDataImporterUI

FolderListDataSource - Class in org.hkijena.jipipe.plugins.filesystem.datasources

Provides an input folder

FolderListDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.FolderListDataSource

Creates a new instance

FolderListDataSource(FolderListDataSource) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.FolderListDataSource

Copies the algorithm

FollowSpotsPerTrackNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks

FollowSpotsPerTrackNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode

FollowSpotsPerTrackNode(FollowSpotsPerTrackNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode

FontFamilyParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

FontFamilyParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.FontFamilyParameter

FontFamilyParameter(DynamicStringEnumParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.FontFamilyParameter

FontFamilyParameter(String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.FontFamilyParameter

FontFamilyParameter.Deserializer - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Deserializes FontFamilyParameter

FontFamilyParameter.Serializer - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Serializes FontFamilyParameter

FontStyleParameter - Enum in org.hkijena.jipipe.plugins.parameters.library.primitives

FORCE_REFLECTION - Static variable in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Whether to force reflection

FORCE_TRAVERSE - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

With this flag, the parameter collection is always traversed, even if the provided parameter collection was already traversed

forceCloseTab(JIPipeDesktopTabPane.DocumentTab) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Closes the tab.

forEach3DIn5DGenerate(ImagePlus, TriFunction<ImageHandler, ImageSliceIndex, JIPipeProgressInfo, ImageHandler>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ij3d.IJ3DUtils

forEach3DIn5DIO(ImagePlus, TriConsumer<ImageHandler, ImageSliceIndex, JIPipeProgressInfo>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ij3d.IJ3DUtils

ForEachFunction - Class in org.hkijena.jipipe.plugins.expressions.functions

ForEachFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.ForEachFunction

forEachIndexedCTStack(ImagePlus, TriConsumer<ImagePlus, ImageSliceIndex, JIPipeProgressInfo>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Runs the function for each C, and T slice.

forEachIndexedSlice(ImagePlus, BiConsumer<ImageProcessor, Integer>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Runs the function for each slice

forEachIndexedTHyperStack(ImagePlus, TriConsumer<ImagePlus, ImageSliceIndex, JIPipeProgressInfo>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Runs the function for each T hyperstack

forEachIndexedZCTSlice(ImagePlus, BiConsumer<ImageProcessor, ImageSliceIndex>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Runs the function for each Z, C, and T slice.

forEachIndexedZCTSlice(ImpImageData, BiConsumer<BufferedImage, ImageSliceIndex>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imp.utils.ImpImageUtils

Runs the function for each Z, C, and T slice.

forEachIndexedZCTSlice(OpenCvImageData, BiConsumer<opencv_core.Mat, ImageSliceIndex>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

Runs the function for each Z, C, and T slice.

forEachIndexedZCTSliceWithProgress(ImagePlus, TriConsumer<ImageProcessor, ImageSliceIndex, JIPipeProgressInfo>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Runs the function for each Z, C, and T slice.

forEachIndexedZTSlice(ImagePlus, BiConsumer<Map<Integer, ImageProcessor>, ImageSliceIndex>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Deprecated.

forEachIndexedZTStack(ImagePlus, TriConsumer<ImagePlus, ImageSliceIndex, JIPipeProgressInfo>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

forEachSlice(ImagePlus, Consumer<ImageProcessor>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Runs the function for each slice

formatBasePath(String) - Static method in class org.hkijena.jipipe.utils.JIPipeResourceManager

Applies the appropriate formatting for a base path

formatDateTime(LocalDateTime) - Static method in class org.hkijena.jipipe.utils.StringUtils

A nice human-readable format

formatDuration(long) - Static method in class org.hkijena.jipipe.utils.StringUtils

Formats a duration in milliseconds to something readable

formatNumber(double) - Static method in class org.hkijena.jipipe.plugins.parameters.library.primitives.NumberDesktopParameterEditorUI

formatPluralS(int, String) - Static method in class org.hkijena.jipipe.utils.StringUtils

formatSize(long) - Static method in class org.hkijena.jipipe.utils.StringUtils

FormData - Class in org.hkijena.jipipe.plugins.forms.datatypes

Base class for any form data.

FormData() - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.FormData

FormData(FormData) - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.FormData

FormData.Serializer - Class in org.hkijena.jipipe.plugins.forms.datatypes

FormData.TabSettings - Class in org.hkijena.jipipe.plugins.forms.datatypes

FormGeneratorAlgorithm - Class in org.hkijena.jipipe.plugins.forms.algorithms

A node base class that adds a new form element into the list of existing forms

FormGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.FormGeneratorAlgorithm

FormGeneratorAlgorithm(FormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.FormGeneratorAlgorithm

FormPanelContentPanel() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.FormPanelContentPanel

FormPanelEntry(int, Component, Component, Component, boolean) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.FormPanelEntry

FormsDialog - Class in org.hkijena.jipipe.plugins.forms.ui

FormsDialog(JIPipeDesktopWorkbench, List<JIPipeMultiIterationStep>, JIPipeDataSlot, String) - Constructor for class org.hkijena.jipipe.plugins.forms.ui.FormsDialog

FormsPlugin - Class in org.hkijena.jipipe.plugins.forms

Extension that adds forms

FormsPlugin() - Constructor for class org.hkijena.jipipe.plugins.forms.FormsPlugin

FrameTest - Class in org.hkijena.jipipe.desktop

FrameTest() - Constructor for class org.hkijena.jipipe.desktop.FrameTest

FrangiVesselnessFeatures - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

Applies CLAHE image enhancing

FrangiVesselnessFeatures(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.FrangiVesselnessFeatures

FrangiVesselnessFeatures(FrangiVesselnessFeatures) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.FrangiVesselnessFeatures

Copies the algorithm

FrangiVesselnessFeatures.SlicingMode - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

Available ways how to handle higher-dimensional images

fromCategory(JIPipeNodeTypeCategory) - Static method in enum org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabasePipelineVisibility

fromCSV(Path) - Static method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

fromCSV(Path, String) - Static method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

fromEvaluator(ExpressionEvaluator, boolean) - Static method in class org.hkijena.jipipe.plugins.expressions.ExpressionConstantEntry

Extracts operators from an evaluator

fromEvaluator(ExpressionEvaluator, boolean) - Static method in class org.hkijena.jipipe.plugins.expressions.ExpressionOperatorEntry

Extracts operators from an evaluator

fromFile(Path) - Static method in class org.hkijena.jipipe.plugins.parameters.library.markup.MarkdownText

Loads a document from file

fromImage(ImagePlus, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.LUTData

Creates a LUT object from an image.

fromJson(JsonNode) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

fromJson(JsonNode) - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration

Loads this configuration from JSON

fromJson(JsonNode, JIPipeValidationReportContext, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Loads this graph from JSON

fromJson(JsonNode, JIPipeValidationReportContext, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Loads this algorithm from JSON Please do not override this method if absolutely necessary.

fromJson(JsonNode) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Loads the holder from JSON

fromJson(JsonNode, JIPipeValidationReportContext, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Loads the project from JSON

fromJson(JsonNode) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.FormData

Loads metadata from JSON

fromJson(JsonNode) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

Loads metadata from JSON

fromJson(JsonNode) - Method in interface org.hkijena.jipipe.utils.json.JsonDeserializable

Loads JSON data into the current object instance

fromList(Collection<?>, String) - Static method in interface org.hkijena.jipipe.plugins.tables.datatypes.TableColumnData

Creates a new column from a collection.

fromLUT(LUT, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.LUTData

Imports an ImageJ LUT into a LUT object.

fromNativeName(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationType

fromNativeValue(int) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationType

fromPluginResource(String) - Static method in class org.hkijena.jipipe.plugins.parameters.library.markup.MarkdownText

Loads a document from the JIPipe plugin resources

fromPluginResource(String, Map<String, Class<?>>) - Static method in class org.hkijena.jipipe.plugins.parameters.library.markup.MarkdownText

Loads a document from the JIPipe plugin resources

fromPython(PyDictionary) - Static method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Converts a Python dictionary of column name to row data list to a results table

fromResourceURL(URL, boolean, Map<String, Class<?>>) - Static method in class org.hkijena.jipipe.plugins.parameters.library.markup.MarkdownText

Loads a document from a resource URL

fromTableModel(TableModel, TableColumnModel, boolean) - Static method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Imports a table from a table model and column model

fromXLSX(Path) - Static method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

fullRedraw() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Removes all UIs and adds them back in

functionallyEquals(Object) - Method in class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents

functionallyEquals(Object) - Method in interface org.hkijena.jipipe.api.JIPipeFunctionallyComparable

functionallyEquals(Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

functionallyEquals(Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

functionallyEquals(Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns true if this node and the other node are functionally equal (i.e. they have the same functional parameters).

FunctionDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.api.functions

Editor for FunctionParameter

FunctionDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionDesktopParameterEditorUI

FunctionNode(String, List<JIPipeExpressionCustomASTParser.ASTNode>) - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.FunctionNode

FunctionParameter<I,P,O> - Class in org.hkijena.jipipe.plugins.parameters.api.functions

A parameter that allows to model a function with an input, an output, and parameters.

FunctionParameter(Class<I>, Class<P>, Class<O>) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter

Creates a new instance

FunctionParameter(FunctionParameter<I, P, O>) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter

FunctionParameter.Deserializer<I,P,O> - Class in org.hkijena.jipipe.plugins.parameters.api.functions

Deserializes the parameter

FunctionParameter.Serializer - Class in org.hkijena.jipipe.plugins.parameters.api.functions

Serializes the parameter

FunctionParameterInputAccess<I,P,O> - Class in org.hkijena.jipipe.plugins.parameters.api.functions

Access to a FunctionParameter input

FunctionParameterInputAccess(JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterInputAccess

FunctionParameterOutputAccess<I,P,O> - Class in org.hkijena.jipipe.plugins.parameters.api.functions

Access to a FunctionParameter output

FunctionParameterOutputAccess(JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterOutputAccess

FunctionParameterParameterAccess<I,P,O> - Class in org.hkijena.jipipe.plugins.parameters.api.functions

Access to a FunctionParameter parameter

FunctionParameterParameterAccess(JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterParameterAccess

FUNCTIONS - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.FastImageArithmeticsAlgorithm

FunctionSelectorList - Class in org.hkijena.jipipe.plugins.expressions

Panel that allows the user to select an ExpressionFunction

FunctionSelectorList() - Constructor for class org.hkijena.jipipe.plugins.expressions.FunctionSelectorList

FunctionSelectorList.ExpressionFunctionRenderer - Class in org.hkijena.jipipe.plugins.expressions

fuzzyEquals(JIPipeAuthorMetadata) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

A fuzzy equals method that attempts to check if the authors are the same

FuzzyKMeansClusteringAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.statistics

FuzzyKMeansClusteringAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm

FuzzyKMeansClusteringAlgorithm(FuzzyKMeansClusteringAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm

FuzzyKMeansClusteringAlgorithm.ClusteringSettings - Class in org.hkijena.jipipe.plugins.tables.nodes.statistics

FuzzyKMeansClusteringAlgorithm.OutputSettings - Class in org.hkijena.jipipe.plugins.tables.nodes.statistics

G

GaborKernelGenerator - Class in org.hkijena.jipipe.plugins.opencv.nodes.generators

GaborKernelGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaborKernelGenerator

GaborKernelGenerator(GaborKernelGenerator) - Constructor for class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaborKernelGenerator

GaussianBlur2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur

Wrapper around GaussianBlur

GaussianBlur2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.GaussianBlur2DAlgorithm

Instantiates a new node type.

GaussianBlur2DAlgorithm(GaussianBlur2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.GaussianBlur2DAlgorithm

Instantiates a new node type.

GaussianBlur3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur

Wrapper around GaussianBlur

GaussianBlur3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm

Instantiates a new node type.

GaussianBlur3DAlgorithm(GaussianBlur3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm

Instantiates a new node type.

GaussianFitSpotSegmentation3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.segmentation

GaussianFitSpotSegmentation3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.GaussianFitSpotSegmentation3DAlgorithm

GaussianFitSpotSegmentation3DAlgorithm(GaussianFitSpotSegmentation3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.GaussianFitSpotSegmentation3DAlgorithm

GaussianKernelGenerator - Class in org.hkijena.jipipe.plugins.opencv.nodes.generators

GaussianKernelGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaussianKernelGenerator

GaussianKernelGenerator(GaussianKernelGenerator) - Constructor for class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaussianKernelGenerator

gc() - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter

gc(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph

GCEvent(JIPipeGraphRunGCGraph, JIPipeOutputDataSlot) - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph.GCEvent

GCEventEmitter() - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph.GCEventEmitter

GeneralImageViewerPanelPlugin2D - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d

GeneralImageViewerPanelPlugin2D(JIPipeDesktopLegacyImageViewer) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.GeneralImageViewerPanelPlugin2D

generate(JIPipeDesktopWorkbench, Component, Class<T>) - Method in class org.hkijena.jipipe.api.parameters.DefaultJIPipeParameterGenerator

generate(JIPipeDesktopWorkbench, Component, Class<T>) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterGenerator

Generates the values

generate(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.StringQueryExpression

Attempts to run the expression.

generate(int, int, int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.BlackToWhiteTrackBackground

generate(int, int, int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.HSBHueTrackBackground

generate(int, int, int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LABBlueYellowTrackBackground

generate(int, int, int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LABGreenRedTrackBackground

generate(int, int, int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LABLightnessTrackBackground

generate(int, int, int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.RGBBlueTrackBackground

generate(int, int, int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.RGBGreenTrackBackground

generate(int, int, int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.RGBRedTrackBackground

generate(int, int, int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.WhiteToRedTrackBackground

generate(JIPipeDesktopWorkbench, Component, Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.EnumParameterGenerator

generate(int, int, int, int) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.DefaultTrackBackground

generate(int, int, int, int) - Method in interface org.hkijena.jipipe.plugins.parameters.library.ranges.PaintGenerator

generateAfterDialog(JIPipeWorkbench, Component, Class<T>) - Method in class org.hkijena.jipipe.api.parameters.DefaultJIPipeParameterGenerator

This function generates the values after the dialog was confirmed

generateAfterDialog(JIPipeWorkbench, Component, Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.EnumParameterGenerator

generateAfterDialog(JIPipeWorkbench, Component, Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.NumberRangeParameterGenerator

generateAliasIdFor(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Generates an alias ID for a node

generateAnnotationValue(Collection<JIPipeTextAnnotation>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotationFilterExpression

Generates an annotation value

generateAnnotationValue(Collection<JIPipeTextAnnotation>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.AnnotationGeneratorExpression

Generates an annotation value

generateCode(StringBuilder, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.python.PythonPackageLibraryEnvironment

Installs the library if needed

GenerateColumnAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes

Algorithm that adds or replaces a column by a generated value

GenerateColumnAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.GenerateColumnAlgorithm

Creates a new instance

GenerateColumnAlgorithm(GenerateColumnAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.GenerateColumnAlgorithm

Creates a copy

generateCompendiumFor(JIPipeDataInfo, boolean) - Method in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDataTypeCompendiumUI

generateCompendiumFor(JIPipeNodeInfo, boolean) - Method in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopAlgorithmCompendiumUI

generateCompendiumFor(T, boolean) - Method in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopCompendiumUI

Generates the compendium page for the item

generateDataBatchesDryRun(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationStepAlgorithm

Deprecated.

use generateDataBatchesGenerationResult

generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.looping.LoopStartNode

Deprecated.

generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm

generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm

generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm

generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm

generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm

generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationStepAlgorithm

Generates iteration steps.

generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.forms.algorithms.IteratingFormProcessorAlgorithm

generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.forms.algorithms.MergingFormProcessorAlgorithm

generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.forms.algorithms.SimpleIteratingFormProcessorAlgorithm

GeneratedColumn() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator.GeneratedColumn

GeneratedColumn(String, JIPipeExpressionParameter) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator.GeneratedColumn

GeneratedColumn(KeyValueThresholdPartitionGenerator.GeneratedColumn) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator.GeneratedColumn

GenerateDocumentationUtil - Class in org.hkijena.jipipe.plugins.clij2

GenerateDocumentationUtil() - Constructor for class org.hkijena.jipipe.plugins.clij2.GenerateDocumentationUtil

GeneratedParameters - Class in org.hkijena.jipipe.plugins.multiparameters.nodes

Encapsulates the generation of parameters

GeneratedParameters(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.GeneratedParameters

GeneratedParameters(GeneratedParameters) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.GeneratedParameters

generateEnvironment() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstaller

Generates the final environment.

generateEnvironment(SelectSystemPythonInstaller.Configuration) - Static method in class org.hkijena.jipipe.plugins.python.installers.SelectSystemPythonInstaller

generateForEachIndexedZCTSlice(ImagePlus, BiFunction<ImageProcessor, ImageSliceIndex, ImageProcessor>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Runs the function for each Z, C, and T slice.

generateForEachIndexedZCTSlice(OpenCvImageData, BiFunction<opencv_core.Mat, ImageSliceIndex, opencv_core.Mat>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

Runs the function for each Z, C, and T slice.

GenerateFromMathExpression2D - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Wrapper around ImageProcessor

GenerateFromMathExpression2D(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateFromMathExpression2D

Instantiates a new node type.

GenerateFromMathExpression2D(GenerateFromMathExpression2D) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateFromMathExpression2D

Instantiates a new node type.

generateLineVertices(float, float, float, float, float, float, float, float, int) - Static method in class org.hkijena.jipipe.plugins.scene3d.utils.Scene3DUtils

GenerateLUTImageFromColorMap - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate

Wrapper around ImageProcessor

GenerateLUTImageFromColorMap(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap

Instantiates a new node type.

GenerateLUTImageFromColorMap(GenerateLUTImageFromColorMap) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap

Instantiates a new node type.

GenerateMissingImageFromMathExpression2D - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate

Wrapper around ImageProcessor

GenerateMissingImageFromMathExpression2D(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

Instantiates a new node type.

GenerateMissingImageFromMathExpression2D(GenerateMissingImageFromMathExpression2D) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

Instantiates a new node type.

GenerateMissingRoiListsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate

GenerateMissingRoiListsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.GenerateMissingRoiListsAlgorithm

GenerateMissingRoiListsAlgorithm(GenerateMissingRoiListsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.GenerateMissingRoiListsAlgorithm

GenerateMissingTablesAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate

Deprecated.

GenerateMissingTablesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm

Deprecated.

GenerateMissingTablesAlgorithm(GenerateMissingTablesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm

Deprecated.

GenerateMissingTablesAlgorithm2 - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate

GenerateMissingTablesAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm2

GenerateMissingTablesAlgorithm2(GenerateMissingTablesAlgorithm2) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm2

GenerateMissingZeroImage - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate

Wrapper around ImageProcessor

GenerateMissingZeroImage(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingZeroImage

Instantiates a new node type.

GenerateMissingZeroImage(GenerateMissingZeroImage) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingZeroImage

Instantiates a new node type.

generateName(JIPipeDataTable, int, Set<String>) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter

Generates a unique string based on metadata for the selected row

generateName(JIPipeDataTableInfo, int, Set<String>) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter

generateParameterDocumentation(JIPipeParameterAccess, JIPipeParameterTree) - Static method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

GenerateParametersFromExpressionAlgorithm - Class in org.hkijena.jipipe.plugins.multiparameters.nodes

GenerateParametersFromExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm

GenerateParametersFromExpressionAlgorithm(GenerateParametersFromExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm

GenerateParametersFromExpressionAlgorithm.Column - Class in org.hkijena.jipipe.plugins.multiparameters.nodes

generatePath(JIPipeDataTable, int, Set<String>) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter

Generates a unique path based on metadata for the selected row

generatePath(JIPipeDataTableInfo, int, Set<String>) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter

generatePath(Path, Path, Map<String, Path>, String, int, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.expressions.DataExportExpressionParameter

generatePreview(ImagePlus, ColorSpace, int, int) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Generates a preview for a colored image with color space

generateRandomString(String, int) - Static method in class org.hkijena.jipipe.utils.StringUtils

Generates a random string

GenerateRandomUniqueAnnotation - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Generates annotations from filenames

GenerateRandomUniqueAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.GenerateRandomUniqueAnnotation

New instance

GenerateRandomUniqueAnnotation(GenerateRandomUniqueAnnotation) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.GenerateRandomUniqueAnnotation

Copies the algorithm

generateRoi3dRelationRowMeasurements(ImageHandler, int, int, int, boolean, ResultsTableData, ROI3D, ROI3D, int, String) - Static method in class org.hkijena.jipipe.plugins.ij3d.IJ3DUtils

generateRoi3dRowMeasurements(ImageHandler, int, ROI3D, int, boolean, ResultsTableData, int, String) - Static method in class org.hkijena.jipipe.plugins.ij3d.IJ3DUtils

generateROIRelationRowMeasurements(ImagePlus, int, int, int, boolean, ResultsTableData, Roi, Roi, int, String) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageJAlgorithmUtils

generateROIRowMeasurements(ImagePlus, int, Roi, ImageStatisticsSetParameter, boolean, ResultsTableData, int, String) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageJAlgorithmUtils

generateRotations(JIPipeWorkbench) - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

generateSlice(int, int, int, double, boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

Generates a slice

GenerateStructureElement2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate

Wrapper around ImageProcessor

GenerateStructureElement2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateStructureElement2DAlgorithm

Instantiates a new node type.

GenerateStructureElement2DAlgorithm(GenerateStructureElement2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateStructureElement2DAlgorithm

Instantiates a new node type.

GenerateStructureElement3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate

Wrapper around ImageProcessor

GenerateStructureElement3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateStructureElement3DAlgorithm

Instantiates a new node type.

GenerateStructureElement3DAlgorithm(GenerateStructureElement3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateStructureElement3DAlgorithm

Instantiates a new node type.

GenerateTableFromExpressionAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes

Algorithm that adds or replaces a column by a generated value

GenerateTableFromExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.GenerateTableFromExpressionAlgorithm

Creates a new instance

GenerateTableFromExpressionAlgorithm(GenerateTableFromExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.GenerateTableFromExpressionAlgorithm

Creates a copy

generateTextAnnotation(Collection<JIPipeTextAnnotation>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.NamedTextAnnotationGeneratorExpression

Generates an annotation

generateThumbnail(ImagePlus, ColorSpace, int, int) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Generates a thumbnail for a colored image with color space

generateUnindexedVertexNormalsFlat(float[]) - Static method in class org.hkijena.jipipe.plugins.scene3d.utils.Scene3DUtils

GenerateUniqueAnnotation - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Generates annotations from filenames

GenerateUniqueAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.GenerateUniqueAnnotation

New instance

GenerateUniqueAnnotation(GenerateUniqueAnnotation) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.GenerateUniqueAnnotation

Copies the algorithm

generateUVSphereVertices(float, float, float, float, float, float, int) - Static method in class org.hkijena.jipipe.plugins.scene3d.utils.Scene3DUtils

generateValidityReport(JIPipeValidationReportContext) - Method in interface org.hkijena.jipipe.api.validation.JIPipeValidatable

Generates a report for this object

GenerateVectorFromMathExpression - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Wrapper around ImageProcessor

GenerateVectorFromMathExpression(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

Instantiates a new node type.

GenerateVectorFromMathExpression(GenerateVectorFromMathExpression) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

Instantiates a new node type.

generateWholeCompendium(boolean) - Method in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopCompendiumUI

Generates a document that contains the whole compendium

GenerateZeroImage - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate

Wrapper around ImageProcessor

GenerateZeroImage(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateZeroImage

Instantiates a new node type.

GenerateZeroImage(GenerateZeroImage) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateZeroImage

Instantiates a new node type.

GenericOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

GenericOperator(String, int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.GenericOperator

GenericPredicateOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

GenericPredicateOperator(String, int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.GenericPredicateOperator

GeodesicDistanceMap2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap

GeodesicDistanceMap2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.GeodesicDistanceMap2DAlgorithm

Instantiates a new node type.

GeodesicDistanceMap2DAlgorithm(GeodesicDistanceMap2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.GeodesicDistanceMap2DAlgorithm

Instantiates a new node type.

get() - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore

get(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

get(Class<T>) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess

get() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDummyParameterCollection

get(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Returns the parameter with key

get(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess

get(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess

get(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

get(Class<T>) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess

Gets the parameter value

get(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

get(int) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration

Returns a runtime partition with the specific index

get() - Method in class org.hkijena.jipipe.plugins.ijocr.utils.TesseractLanguagesSupplier

get(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.LUTData

get(ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imp.utils.ImpImageDataBuilder

get(int, int, int) - Method in class org.hkijena.jipipe.plugins.imp.utils.ImpImageDataBuilder

get(Class<U>) - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameterItemParameterAccess

get(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterInputAccess

get(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterOutputAccess

get(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterParameterAccess

get(Class<U>) - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

get(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterKeyAccess

get(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterValueAccess

get(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableCellAccess

get(int) - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

get() - Method in class org.hkijena.jipipe.utils.data.OwningStore

get() - Method in interface org.hkijena.jipipe.utils.data.Store

Gets the stored data or null if the data is not present

get() - Method in class org.hkijena.jipipe.utils.data.WeakStore

get() - Method in class org.hkijena.jipipe.utils.InstantFuture

get(long, TimeUnit) - Method in class org.hkijena.jipipe.utils.InstantFuture

getA1() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.connections.JIPipeDesktopRectangularLine

getAbsoluteExecutablePath() - Method in class org.hkijena.jipipe.api.environments.JIPipeProcessArtifactEnvironment

getAbsoluteExecutablePath() - Method in class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

getAbsoluteExecutablePath() - Method in class org.hkijena.jipipe.plugins.python.PythonEnvironment

getAbsoluteFileName() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileDataSource

getAbsoluteFileNames() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileListDataSource

getAbsoluteFolderPath() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderDataSource

getAbsoluteFolderPaths() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderListDataSource

getAbsoluteInstallationPath() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstaller

getAbsoluteLibraryDirectory() - Method in class org.hkijena.jipipe.plugins.python.PythonPackageLibraryEnvironment

getAbsolutePath() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathDataSource

getAbsolutePaths() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathListDataSource

getAccelerationPreference() - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

getAccelerationPreferenceVersions() - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

getAcceptedDataType() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

getAcceptedDataTypeId() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

getAcceptedDataTypeInfo() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Return the info about the slot's data type

getAcceptedModuleFieldClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.DataSlotModuleInput

getAcceptedModuleFieldClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.DataSlotModuleOutput

getAcceptedModuleFieldClass() - Method in interface org.hkijena.jipipe.plugins.imagej2.io.ImageJ2ModuleIO

The class used to store data inside a module

getAcceptedModuleFieldClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.ParameterImageJ2ModuleInput

getAcceptedModuleFieldClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput

getAcceptedModuleFieldClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.ServiceImageJ2ModuleIO

getAccess() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.BeforeAddParameterEvent

getAccessList() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess

getAccessor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm.Entry

getAccessor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm.Entry

getAccessorId() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OMEAccessorParameter

getAccumulationFunction() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

getAccumulatorThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LinesHoughDetection2DAlgorithm

getAcknowledgements() - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

Gets the list of acknowledged authors

getAcknowledgements() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Returns additionally cited authors

getAcknowledgements() - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePlugin

getAcknowledgements() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPlugin

getAcknowledgements() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingPlugin

getAcknowledgements() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.TrackMatePlugin

getAcknowledgements() - Method in class org.hkijena.jipipe.plugins.ijweka.WekaPlugin

getAcknowledgements() - Method in class org.hkijena.jipipe.plugins.ilastik.IlastikPlugin

getAcknowledgements() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2Plugin

getAcknowledgements() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.ImageJAlgorithmsPlugin

getAcknowledgements() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesPlugin

getAcknowledgements() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPlugin

getAcknowledgements() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePlugin

getAction() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction

getAction() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI.NodeUIActionRequestedEvent

getActions() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification

getActions() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

getActions() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

getActivate() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

getActivatedPlugins() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

List of all activated extensions

getAdapterEnvironment(JIPipeProject) - Static method in class org.hkijena.jipipe.plugins.python.CorePythonPlugin

getAdaptiveParameter(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

getAdaptiveParameterSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm

getAdaptiveParameterSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

getAdaptiveParameterSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

getAdaptiveParameterSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm

getAdaptiveParameterSettings() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParametersAlgorithm

getAddableAlgorithms() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

getAddBorder2DAlgorithm() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm

getAddDataToString() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ConvertToAnnotationTable

getAddedSlots() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddAlgorithmSlotPanel

getAddedTables() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableInfo

getAddInputSlotArea() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

getAdditionalCitations() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo

A list of additional citations

getAdditionalCitations() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

getAdditionalCitations() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

Returns a list of additional citations

getAdditionalCitations() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

getAdditionalColumns() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

getAdditionalData() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

getAdditionalFiles() - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail

getAdditionalMetadata() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

getAdditionalMetadata(Class<T>, String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns additional metadata or null if it does not exist

getAdditionalMetadata() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

getAdditionalUIVariables() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameter

getAdditionalVariables() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.InputEntry

getAddMetadata() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SubdivideFilamentEdges

getAddOutputSlotArea() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

getAdvancedTurboRegParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DReferencedAlgorithm

getAdvancedTurboRegParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DSingleAlgorithm

getAffiliations() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

getAlgorithm() - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration

getAlgorithm() - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantUI

getAlgorithm() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

getAlgorithm() - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

getAlgorithmCompartment(JIPipeDesktopProjectWorkbench, JIPipeDataSlot) - Static method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotPreview

Returns the compartment name of the algorithm that generated the data

getAlgorithmCompartmentName() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotRowUI

Returns the compartment name of the algorithm that generated the data

getAlgorithmDocumentation(JIPipeNodeInfo) - Static method in class org.hkijena.jipipe.utils.TooltipUtils

getAlgorithmDocumentation(JIPipeGraphNode) - Static method in class org.hkijena.jipipe.utils.TooltipUtils

getAlgorithmId() - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

getAlgorithmName() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotRowUI

Returns the name of the algorithm that generated the data

getAlgorithmName() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImagePlusResultImportRun

getAlgorithmName() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.OMEImageResultImportRun

getAlgorithmTooltip(JIPipeNodeInfo) - Static method in class org.hkijena.jipipe.utils.TooltipUtils

Creates a tooltip for an algorithm.

getAlgorithmTooltip(JIPipeNodeInfo, boolean) - Static method in class org.hkijena.jipipe.utils.TooltipUtils

Creates a tooltip for an algorithm

getAlgorithmTooltip(JIPipeNodeTemplate, boolean) - Static method in class org.hkijena.jipipe.utils.TooltipUtils

Creates a tooltip for an algorithm

getAlgorithmTooltip(JIPipeGraphNode, boolean) - Static method in class org.hkijena.jipipe.utils.TooltipUtils

Creates a tooltip for an algorithm

getAliases() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

getAliases() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

A list of alternative menu locations

getAliases() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

getAliases() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2AlgorithmInfo

getAliasesOf(Class<? extends JIPipeGraphNode>) - Static method in class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo

Gets alternative menu locations

getAliasIdInParentGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the alias ID of this node.

getAliasIdOf(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Gets the alias ID of a node A unique alias ID is generated if none is assigned yet

getAlignment(int) - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Determines the desired alignment for this view along an axis.

getAllChildParameters(Object) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Returns all child parameters of the entry If the entry is an JIPipeParameterAccess, it is returned.

getAllData(Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets all the data stored in a specific row.

getAllDataAnnotations() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets the list of all data annotations

getAllDependencies() - Method in interface org.hkijena.jipipe.JIPipeDependency

Gets a flat list of all dependencies (no nested dependencies) This method returns the dependencies to be stored into JSON JIPipeMutableDependency instances are returned instead of the original type and the thumbnail metadata is removed

getAllDependencies(boolean) - Method in interface org.hkijena.jipipe.JIPipeDependency

Gets a flat list of all dependencies (no nested dependencies) This method returns the dependencies to be stored into JSON JIPipeMutableDependency instances are returned instead of the original type and the thumbnail metadata is removed

getAllDependencies() - Method in class org.hkijena.jipipe.plugins.imp.ImpPlugin

getAllDependencies() - Method in class org.hkijena.jipipe.plugins.opencv.OpenCvPlugin

getAllDependenciesOf(String) - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

Returns the dependency IDs that are dependencies of the provided extension ID

getAllDependentsOf(String) - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

Returns the dependency IDs that are depentents of the provided extension ID

getAllDescriptions() - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.Measurement

getAllImageJUpdateSiteDependencies() - Method in interface org.hkijena.jipipe.JIPipeDependency

Gets a flat list of all ImageJ update site dependencies (including transitive dependencies) This method returns the dependencies to be stored into JSON

getAllowedInputSlotTypes() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

getAllowedInputSlotTypes() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

getAllowedOutputSlotTypes() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

getAllowedOutputSlotTypes() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

getAllowedTypes() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

getAllowedValues() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicEnumParameter

Returns the list of allowed choices Please note that if isEditable() is true, other options might be available

getAllowedValues() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetParameter

getAllPredecessorNodes(JIPipeGraphNode, List<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns ALL predecessor algorithms of an algorithm.

getAllPredecessors(Graph<V, E>, V) - Static method in class org.hkijena.jipipe.utils.GraphUtils

Gets all parent nodes of the vertex

getAllPredecessors(V) - Method in class org.hkijena.jipipe.utils.WeakPredecessorInspector

getAllRegisteredDisplayOperations(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

getAllRegisteredImportOperations(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

getAllSuccessors(Graph<V, E>, V) - Static method in class org.hkijena.jipipe.utils.GraphUtils

Gets all successors of the vertex

getAllTemplates(JIPipeProject) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

Gets all templates

getAllTextAnnotations() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets the list of all text annotations

getAlpha() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.EdgeFilter3DAlgorithm

getAlpha() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.SymmetryFilter3DAlgorithm

getAlpha() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

getAlpha() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures

getAlpha() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

getAlternativeName() - Method in class org.hkijena.jipipe.api.nodes.JIPipeNodeMenuLocation

getAltText() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Returns the text to display if the image can't be loaded.

getAnalysisResults() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.CustomColoc2.ColocResult

getAnchor() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters

getAnchor() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

getAnchor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

getAnchor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.CanvasEqualizer

getAnchor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm

getAnchor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm

getAnchor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm

getAnchor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

getAnchor() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

getAnchor() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

getAngle() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ArrowAnnotationGraphNode

getAngle() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

getAngle() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

getAngle() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RotateRoiAlgorithm

getAngle() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm

getAnimationFPSControl() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

getAnisotropy() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationEnhancementSettings_Old

Deprecated.

getAnisotropy() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationTweaksSettings

getAnisotropy() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTweaksSettings

getAnisotropy() - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationTweaksSettings

getAnnotateC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

getAnnotateC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm

getAnnotateT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

getAnnotateT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm

getAnnotateWithCurrentData() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractDataAnnotation

getAnnotateWithRoiIndex() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromRoiAlgorithm

getAnnotateWithRoiName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromRoiAlgorithm

getAnnotateZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

getAnnotateZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm

getAnnotationBoundingHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

getAnnotationBoundingHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

getAnnotationBoundingHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm

getAnnotationBoundingWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

getAnnotationBoundingWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

getAnnotationBoundingWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm

getAnnotationC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm

getAnnotationC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm

getAnnotationC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

getAnnotationC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

getAnnotationCLocation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

getAnnotationColumnChannelIndex() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsAlgorithm

Deprecated.

getAnnotationColumnFilter() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

getAnnotationColumns() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Deprecated.

use getTextAnnotationColumns()

getAnnotationColumns() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableInfo

getAnnotationColumnSlotName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsAlgorithm

Deprecated.

getAnnotationExpression() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveAnnotationAlgorithm

getAnnotationExpression() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotationToPath

getAnnotationFilter() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SimplifyAnnotationsAlgorithm

getAnnotationGenerator() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertTracksToRoiNode

getAnnotationGenerator() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SplitSpotsNode

getAnnotationGenerator() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.SplitTracksNode

getAnnotationId() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROAnnotationReferenceData

getAnnotationIndex() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm

getAnnotationIOSettings() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.BooleanFormData

getAnnotationIOSettings() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.DoubleFormData

getAnnotationIOSettings() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.EnumFormData

getAnnotationIOSettings() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.IntegerFormData

getAnnotationIOSettings() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

getAnnotationIOSettings() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.StringFormData

getAnnotationList() - Method in class org.hkijena.jipipe.plugins.cellpose.utils.CellposeModelInfo

getAnnotationList() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.InputEntry

getAnnotationMap(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Deprecated.

Use getTextAnnotationMap instead

getAnnotationMap() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

Mutable access to the annotations

getAnnotationMatchingMethod() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

getAnnotationMatchingMethod() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

getAnnotationMatchingMethod() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

getAnnotationMatchingMethod() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

getAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm

getAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm

getAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm

getAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROPlateReferenceAlgorithm

getAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm

getAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

getAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

getAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.AnnotateWithJsonDataAlgorithm

getAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.AnnotateWithTextDataAlgorithm

getAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.AnnotateWithXPathDataAlgorithm

getAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateDataWithTableValues

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithmIterationStepGenerationSettings

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByExpression

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithData

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithDataString

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithSourceSlot

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.DataAnnotationToStringAnnotation

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractAndReplaceAnnotation

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.GenerateRandomUniqueAnnotation

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.GenerateUniqueAnnotation

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RenameAnnotation

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RenameDataAnnotation

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimplePathAnnotationGenerator

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.forms.utils.SingleAnnotationIOSettings

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.ParametersToAnnotationsAlgorithm

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.IteratingPythonScriptAlgorithm

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.MergingPythonScriptAlgorithm

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.PythonScriptAlgorithm

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.r.algorithms.IteratingRScriptAlgorithm

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.r.algorithms.MergingRScriptAlgorithm

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm

getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnsToAnnotationsAlgorithm

getAnnotationName() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByProjectPaths.Entry

getAnnotationName() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithData

getAnnotationName() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SetSingleAnnotation

getAnnotationName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm.Entry

getAnnotationName() - Method in class org.hkijena.jipipe.plugins.omero.parameters.OMEROKeyValuePairToAnnotationImporter

getAnnotationName() - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.AnnotateWithJsonDataAlgorithm.Entry

getAnnotationName() - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.AnnotateWithTextDataAlgorithm.Entry

getAnnotationName() - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.AnnotateWithXPathDataAlgorithm.Entry

getAnnotationName() - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateDataWithTableValues.AnnotationSettings

getAnnotationNameFilter() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveArrayAnnotationsAlgorithm

getAnnotationNameFilter() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveNAAnnotationColumnsAlgorithm

getAnnotationNameFilter() - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AddAnnotationColumnsAlgorithm

getAnnotationNameQuery() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractDataAnnotation

getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess

getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess

getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess

getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

getAnnotationOfType(Class<T>) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess

Gets an annotation for this parameter

getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameterItemParameterAccess

getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterInputAccess

getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterOutputAccess

getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterParameterAccess

getAnnotationOfType(Class<U>) - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterKeyAccess

getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterValueAccess

getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableCellAccess

getAnnotationPrefix() - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AddAnnotationColumnsAlgorithm

getAnnotationRemovalMode() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SimplifyAnnotationsAlgorithm

getAnnotations() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess

getAnnotations() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess

getAnnotations() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess

getAnnotations() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

getAnnotations() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess

Gets all available annotations for this parameter

getAnnotations() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

getAnnotations() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByExpression

getAnnotations() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataRowFolder

getAnnotations() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnnotateByImageStatisticsExpressionAlgorithm

getAnnotations() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameterItemParameterAccess

getAnnotations() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterInputAccess

getAnnotations() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterOutputAccess

getAnnotations() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterParameterAccess

getAnnotations() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

getAnnotations() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterKeyAccess

getAnnotations() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterValueAccess

getAnnotations() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableCellAccess

getAnnotations(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.AnnotationTableData

Gets all annotations at the specified row

getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess

getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess

getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess

getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

getAnnotationsOfType(Class<T>) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess

Gets annotations for this parameter (including the field class) Please note that there is no guarantee that repeatable annotations are resolved properly.

getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameterItemParameterAccess

getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterInputAccess

getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterOutputAccess

getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterParameterAccess

getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterKeyAccess

getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterValueAccess

getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableCellAccess

getAnnotationSupplier() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess

getAnnotationT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm

getAnnotationT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm

getAnnotationT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

getAnnotationT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

getAnnotationTLocation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

getAnnotationType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

getAnnotationType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm

getAnnotationValue() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByProjectPaths.Entry

getAnnotationValue() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SetSingleAnnotation

getAnnotationValue() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.ExplodeRoi3DListAlgorithm

getAnnotationValue() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.ExplodeRoiAlgorithm

getAnnotationValue() - Method in class org.hkijena.jipipe.plugins.omero.parameters.OMEROKeyValuePairToAnnotationImporter

getAnnotationValue() - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateDataWithTableValues.AnnotationSettings

getAnnotationX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm

getAnnotationX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

getAnnotationX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

getAnnotationX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm

getAnnotationXLocation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

getAnnotationY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm

getAnnotationY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

getAnnotationY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

getAnnotationY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm

getAnnotationYLocation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

getAnnotationZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm

getAnnotationZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm

getAnnotationZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

getAnnotationZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

getAnnotationZLocation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

getAppend() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

getApplicationSettingsRegistry() - Method in class org.hkijena.jipipe.JIPipe

getApplicationSettingsRegistry() - Method in interface org.hkijena.jipipe.JIPipeService

getArcHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm.Entry

getArcHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm

Deprecated.

getArcWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm.Entry

getArcWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm

Deprecated.

getArgIndex() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo.OutputTableColumnInfo

getArguments() - Method in class org.hkijena.jipipe.api.environments.JIPipeProcessArtifactEnvironment

getArguments() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.FunctionNode

getArguments() - Method in class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

getArguments() - Method in class org.hkijena.jipipe.plugins.python.PythonEnvironment

getArguments() - Method in class org.hkijena.jipipe.plugins.r.REnvironment

getArguments() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDownloadsApplicationSettings.DownloadEnvironment

getArray() - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

Returns the value as array or an array with the value if it is not an array.

getArrowSize() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ArrowAnnotationGraphNode

getArtifact() - Method in class org.hkijena.jipipe.desktop.app.plugins.artifactsmanager.JIPipeDesktopArtifactManagerUI.ArtifactEntry

getArtifactId() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

getArtifactPaint() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Returns the paint used to color the median and average markers.

getArtifactQuery() - Method in class org.hkijena.jipipe.api.environments.JIPipeArtifactEnvironment

getArtifacts() - Static method in class org.hkijena.jipipe.JIPipe

getArtifactsRegistry() - Method in class org.hkijena.jipipe.JIPipe

getArtifactsRegistry() - Method in interface org.hkijena.jipipe.JIPipeService

getAssembleTemplatesBackground() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

getAssembleTemplatesOutput() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

getAssociationThreshold() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

getAttachment(Class<T>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns an attachment or null if it does not exist

getAttachments() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

getAttitudeExpression() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm

getAttribute() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm

getAttribute() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm

getAttributes() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Fetches the attributes to use when rendering.

getAuthors() - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

getAuthors() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

getAuthors() - Method in class org.hkijena.jipipe.plugins.JIPipePrepackagedDefaultJavaPlugin

getAutoHideEdgeDistanceThreshold() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

getAutoHideEdgeOverlapThreshold() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

getAutoLayout() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

getAutoThresholding() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm

getAutoThresholding() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

getAutoThresholding() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

getAutoThresholdMethod() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.NucleiSegmentation3DAlgorithm

getAvailableData() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

Contains single-column series that will be later spliced together depending on the user's settings

getAvailableExporters(Class<? extends JIPipeData>, boolean) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry

Returns all exporter instances that

getAvailableIcons() - Static method in class org.hkijena.jipipe.plugins.parameters.library.references.IconRefDesktopParameterEditorUI

getAvailableImporters(Class<? extends JIPipeData>, boolean) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry

Returns all importer instances that

getAvailableItems() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopPickerDialog

getAvailablePackages() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstaller

getAvailablePackages() - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderRun

getAvailablePackages() - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderRun

getAvailableParameters() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

Gets the available parameters in the graph

getAvailableParameters() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionVisibilities

An optional reference of all available parameters.

getAvailableSources(JIPipeDataSlot, boolean, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns all available sources for an input slot.

getAvailableTargets(JIPipeDataSlot, boolean, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns all available target for an output slot Does not check for cycles.

getAvailableTypes() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddAlgorithmSlotPanel

getAverageEdgeColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

getAverageVertexColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

getAverageWindow() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfoETA

Gets the window size for the ETA calculation

getAviCompression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImage2Algorithm

getAviCompression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

getAviCompression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm

getAWTWindowTitle(Window) - Static method in class org.hkijena.jipipe.utils.UIUtils

getAzimuthExpression() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm

getB1() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.connections.JIPipeDesktopRectangularLine

getBackground() - Method in enum org.hkijena.jipipe.api.notifications.JIPipeNotificationAction.Style

getBackground() - Method in enum org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMessagePanel.MessageType

getBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

getBackgroundColor() - Method in class org.hkijena.jipipe.plugins.core.nodes.JIPipeCommentNode

getBackgroundColor() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

getBackgroundColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

getBackgroundColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

getBackgroundColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToRGBAlgorithm

getBackgroundColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

getBackgroundColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

getBackgroundColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

getBackgroundColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

getBackgroundColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

getBackgroundColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.CanvasEqualizer

getBackgroundColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm

getBackgroundColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm

getBackgroundColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm

getBackgroundColor() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

getBackgroundImage() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanelImageComponent

getBackgroundImage() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopImageFrameComponent

getBackgroundMargin() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

getBackgroundMargin() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

getBackgroundType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm

getBackgroundValue() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ApplyDistanceTransform2DAlgorithm

getBackgroundZXYRatio() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

getBackupDelay() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeBackupApplicationSettings

getBackupFilter() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.RemoveVertexValueBackupsAlgorithm

getBackupFilter() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.RestoreVertexValueBackupAlgorithm

getBackupItemList() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItemCollection

getBackupOldValue() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.RestoreVertexValueBackupAlgorithm

getBackupOldValue() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexValueFromImageAlgorithm

getBackupOldValueToMetadata() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexValueFromImageAlgorithm

getBackupQueue() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

getBackupTime() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItem

getBands() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Task

getBandwidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

getBarColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

getBarColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

getBarColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

getBarThickness() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

getBarThickness() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

getBarThicknessInPixels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

getBaseDirectory() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.BaseDirectoryChangedEvent

getBaseDirectory() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the current work directory of this algorithm.

getBaseDirectoryChangedEventEmitter() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

getBaseDirectoryChangedEventEmitter() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

getBaseIcon() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.OverlayJIPipeDesktopColorIcon

getBaselineOffset() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

getBaseName() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.GenerateUniqueAnnotation

getBaseName() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.TemporaryFolderDataSource

getBaseName() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Stack2DExporterRun

getBasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

getBaseQuery() - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeArtifactQueryParameter

getBaseRun() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun

getBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

getBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

getBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.grouping.JsonAlgorithm

getBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.looping.LoopStartNode

Deprecated.

getBatchSize() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

getBatchSize() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationPerformanceSettings_Old

Deprecated.

getBatchSize() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2TrainingTweaksSettings

getBatchSize() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTrainingTweaksSettings

getBatchSize() - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeTrainingTweaksSettings

getBeforeAddParameterEventEmitter() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

getBestNextVertex() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph

getBeta() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

getBinAxisFontSize() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

getBinAxisLabel() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

getBinAxisMaximum() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

getBinAxisMinimum() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

getBins() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer

getBins() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

getBioFormatsCompression() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesApplicationSettings

getBioFormatsSettings() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm

getBitDepth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.FastImageArithmeticsAlgorithm

getBitDepth() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.BitDepth

getBitDepth() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.OptionalBitDepth

getBitDepthAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

getBitDepthAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

getBlack() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

Returns the black color.

getBlack() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

Returns the black color.

getBlendMode() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

getBlendMode() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageBlendLayer

getBlockedNotifications() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

getBlockedTemplateNames() - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry

getBlockRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer

getBlockRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm

getBlockRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm

getBlue() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

getBlueThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

getBlueYellowThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

getBody() - Method in class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLText

getBookmarks() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

getBorder() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.CropLabelsAlgorithm

getBorderColor() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory

getBorderColor() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory

getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory

getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory

getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory

getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory

getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory

getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory

getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory

getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory

getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory

getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory

getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewCompartmentNodeDatabaseEntry

getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

getBorderColor() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry

getBorderColor() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory

The border color for algorithm nodes

getBorderColor() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

getBorderColor() - Method in interface org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopColorIcon

getBorderColor() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.OverlayJIPipeDesktopColorIcon

getBorderColor() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.SolidColorIcon

getBorderColor() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

getBorderColor() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.TextBoxAnnotationGraphNode.ShapeParameters

getBorderColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsNodeTypeCategory

getBorderColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelColorMapIcon

getBorderColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm

getBorderColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.CanvasParameters

getBorderColor() - Method in class org.hkijena.jipipe.plugins.parameters.library.colors.ColorMapIcon

getBorderColorFor(JIPipeNodeInfo) - Static method in class org.hkijena.jipipe.utils.UIUtils

Returns a border color for JIPipeNodeInfo

getBorderDefinition() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.RemoveBorderRoisAlgorithm

getBorderDistance() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm

getBorderDistance() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.RemoveBorderFilaments

getBorderInsets(Component, Insets) - Method in class org.hkijena.jipipe.utils.ui.RoundedLineBorder

getBorderMode() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling2DSettings

getBorderMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm

getBorderMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

getBorderMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

getBorderSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.CanvasParameters

getBorderThickness() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode

getBorderThickness() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode

getBorderThickness() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

getBorderThickness() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.TextBoxAnnotationGraphNode

getBorderThickness() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.TextBoxAnnotationGraphNode.ShapeParameters

getBorderType() - Method in class org.hkijena.jipipe.plugins.opencv.nodes.filters.BilateralFilterAlgorithm

getBorderWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

getBorderWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.MontageToStackAlgorithm

getBorderWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

getBottom() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

getBottom() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.InnerMargin

getBottom() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

getBottomIcon() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopAnimatedIcon

getBottomY() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

Get the Y location of the bottom part

getBoundary() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.MirrorImageJ2OutOfBoundsFactoryData

getBounds() - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

Gets the bounds of the 3D ROI

getBounds() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Returns the bounds of area described by the Roi

getBoundsXY() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

getBrightnessThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

getBrowseFacility() - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROGateway

getBrowser() - Method in class org.hkijena.jipipe.api.data.browser.JIPipeDataBrowser.UpdatedEvent

getBrowser() - Method in class org.hkijena.jipipe.api.data.browser.JIPipeDataTableBrowser.UpdatedEvent

getbUnwarpJParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationAlgorithm

getButton() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopColorChooserButton.ColorChosenEvent

getButton() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopLargeButtonRibbonAction

getButton() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopLargeToggleButtonRibbonAction

getButton() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopSmallButtonRibbonAction

getButton() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopSmallToggleButtonRibbonAction

getButton() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopToggleButtonRibbonAction

getButton() - Method in class org.hkijena.jipipe.utils.CustomStateLessToggleButton.ToggledEvent

getButtonIcon() - Method in class org.hkijena.jipipe.desktop.api.nodes.JIPipeDesktopNodeQuickAction

getButtonText() - Method in class org.hkijena.jipipe.desktop.api.nodes.JIPipeDesktopNodeQuickAction

getById(String, Class<T>) - Method in class org.hkijena.jipipe.api.registries.JIPipeApplicationSettingsRegistry

Gets the settings instance with given ID

getById(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Returns the data class with specified ID

getById(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectSettingsRegistry

Gets the settings type with given ID

getByType(Class<T>) - Method in class org.hkijena.jipipe.api.registries.JIPipeApplicationSettingsRegistry

Gets the settings instance with given ID

getC() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

getC() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

getC() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndices

getCache() - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.ClearedEvent

getCache() - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.ModifiedEvent

getCache() - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.StoredEvent

getCache() - Method in class org.hkijena.jipipe.api.cache.JIPipeCacheClearAllRun

getCache() - Method in class org.hkijena.jipipe.api.cache.JIPipeCacheClearOutdatedRun

getCache() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

getCachedArtifacts() - Method in class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry

getCachedLocalArtifacts() - Method in class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry

getCachedRemoteArtifacts() - Method in class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry

getCalculatePreviewQueue() - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantUI

getCalibrationMode() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings.ContrastEnhancerSettings

getCalibrationMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.ImageJContrastEnhancerAlgorithm

getCalibrationMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo16BitAutoContrastAlgorithm

getCalibrationMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo8BitAutoContrastAlgorithm

getCalibrationMode() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm

getCalibrationMode() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.CalibrationParameters

getCalibrationParameters() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.ImportIlastikHDF5ImageAlgorithm

getCalibrationPlugin() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl

getCallbackConfirm() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNext

getCancelledEventEmitter() - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog

getCancelReason() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

getCandidateVertexDegreeLimit() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

getCandidateVertexValueLimit() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

getCanvas() - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphDragAndDropBehavior

Returns the canvas the contains the algorithm nodes

getCanvas() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.dragdrop.JIPipeCreateCompartmentNodesFromDraggedDataDragAndDropBehavior

getCanvas() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.dragdrop.JIPipeCreatePipelineNodesFromDraggedDataDragAndDropBehavior

getCanvas() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

getCanvas() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIPicker2DTool

getCanvas() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.ToolChangedEvent

getCanvasAnchor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.CanvasParameters

getCanvasBackgroundColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.CanvasParameters

getCanvasEqualizer() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

getCanvasParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

getCanvasUI() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

Finds the graph canvas if one is available

getCanvasUI() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

getCanvasUI() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.NodeSelectionChangedEvent

getCanvasUI() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorRunManager

getCategories() - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

getCategories() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

The categories of this extension (see PluginCategoriesEnumParameter for predefined values)

getCategories() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPlugin

getCategories() - Method in class org.hkijena.jipipe.plugins.filesystem.FilesystemPlugin

getCategories() - Method in class org.hkijena.jipipe.plugins.forms.FormsPlugin

getCategories() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsPlugin

getCategories() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingPlugin

getCategories() - Method in class org.hkijena.jipipe.plugins.ijocr.OCRPlugin

getCategories() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.TrackMatePlugin

getCategories() - Method in class org.hkijena.jipipe.plugins.ijweka.WekaPlugin

getCategories() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2Plugin

getCategories() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.ImageJAlgorithmsPlugin

getCategories() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesPlugin

getCategories() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPlugin

getCategories() - Method in class org.hkijena.jipipe.plugins.scene3d.Scene3DPlugin

getCategory() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

getCategory() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool

getCategory() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

getCategory() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool

getCategory() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

getCategory() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

getCategory() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

getCategory() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

getCategory() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo

getCategory() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

getCategory() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Gets the algorithm category

getCategory() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

Returns the algorithm category

getCategory() - Method in class org.hkijena.jipipe.api.nodes.JIPipeNodeMenuLocation

getCategory(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

getCategory() - Method in enum org.hkijena.jipipe.api.settings.JIPipeDefaultApplicationSettingsSheetCategory

getCategory() - Method in class org.hkijena.jipipe.api.settings.JIPipeDefaultApplicationsSettingsSheet

getCategory() - Method in class org.hkijena.jipipe.api.settings.JIPipeDefaultProjectSettingsSheet

getCategory() - Method in enum org.hkijena.jipipe.api.settings.JIPipeDefaultProjectSettingsSheetCategory

getCategory() - Method in interface org.hkijena.jipipe.api.settings.JIPipeSettingsSheet

The category of the settings sheet as displayed in the UI

getCategory() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.MainCategoryFilter

getCategory() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

getCategory() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo

getCategory() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo

getCategory() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

getCategory() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2AlgorithmInfo

getCategory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDataExporterApplicationSettings

getCategory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDefaultCacheDisplayApplicationSettings

getCategory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDefaultResultImporterApplicationSettings

getCategoryAxisFontSize() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CategoryJFreeChartPlotData

getCategoryAxisLabel() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CategoryJFreeChartPlotData

getCategoryColumns() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.UnMeltTableAlgorithm

getCategoryIcon() - Method in class org.hkijena.jipipe.api.settings.JIPipeDefaultApplicationsSettingsSheet

getCategoryIcon() - Method in class org.hkijena.jipipe.api.settings.JIPipeDefaultProjectSettingsSheet

getCategoryIcon() - Method in interface org.hkijena.jipipe.api.settings.JIPipeSettingsSheet

The icon for the category as displayed in the UI

getCategoryIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDataExporterApplicationSettings

getCategoryIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDefaultCacheDisplayApplicationSettings

getCategoryIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDefaultResultImporterApplicationSettings

getCategoryId() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.MainCategoryFilter

getCategoryIds() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewCompartmentNodeDatabaseEntry

getCategoryIds() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

getCategoryIds() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

getCategoryIds() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

getCategoryIds() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

getCategoryIds() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

getCategoryIds() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry

getCategoryOf(Class<? extends JIPipeGraphNode>) - Static method in class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo

Returns the category of an algorithm

getCategoryParameter() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

getcAxis() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm

getCellEditorValue() - Method in class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopTableEditor.NumberEditor

getCellpose2Environment() - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePluginProjectSettings

getCellpose3Environment() - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePluginProjectSettings

getCellposeCustomCode() - Static method in class org.hkijena.jipipe.plugins.cellpose.utils.CellposeUtils

getCellProbabilityThreshold() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationThresholdSettings_Old

Deprecated.

getCellProbabilityThreshold() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationThresholdSettings

getCellRenderer() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopPickerDialog

getCellRendererFor(JIPipeDesktopProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableRowInfo, JIPipeDataAnnotationInfo) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Returns a cell renderer for dataslot result table

getCenterScale() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

getCenterScale() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

getCenterScale() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

getCenterScale() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

getCenterScale() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ScaleRoiAlgorithm

getCenterScale() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

getCenterX() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

getCenterX() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

getCenterX() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

getCenterX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RotateRoiAlgorithm

getCenterX() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

getCenterY() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

getCenterY() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

getCenterY() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

getCenterY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RotateRoiAlgorithm

getCenterY() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

getCenterZ() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

getCenterZ() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

getCenterZ() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

getCenterZ() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

getCentroid(Roi) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Gets the centroid of a ROI

getCentroidC() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

getCentroidC() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

getCentroidDouble(Roi) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Gets the centroid of a ROI

getCentroidT() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

getCentroidT() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

getCentroidX() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

getCentroidX() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

getCentroidY() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

getCentroidY() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

getCentroidZ() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

getCentroidZ() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

getChamferWeights() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap2DAlgorithm

getChamferWeights() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap3DAlgorithm

getChamferWeights() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.GeodesicDistanceMap2DAlgorithm

getChamferWeights() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.LabelChamferDistanceMap3DAlgorithm

getChangedEventEmitter() - Method in class org.hkijena.jipipe.api.registries.JIPipeApplicationSettingsRegistry

getChangedEventEmitter() - Method in class org.hkijena.jipipe.api.registries.JIPipeRecentProjectsRegistry

getChangeThreshold() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXConvergenceParameters

getChannel() - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

getChannel() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.NonSpatialPoint3d

getChannel() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D.CompositeLayer

getChannel1Name() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

getChannel2Name() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

getChannelColorAssignment() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeChannelsAlgorithm

getChannelColorAssignment() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.OverlayImagesAlgorithm

Deprecated.

getChannelColumnFilter() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

getChannelIndexAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm

getChannelIndexAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

getChannelLocation() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

getChannelLocation() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

getChannelLocation() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

getChannelLUT(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

getChannelName(int) - Method in interface org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.ColorSpace

Returns the channel name for a given channel index

getChannelName(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.GreyscaleColorSpace

getChannelName(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.HSBColorSpace

getChannelName(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.IgnoreColorSpace

getChannelName(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.LABColorSpace

getChannelName(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.RGBColorSpace

getChannelName() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerLUTEditor

getChannelName() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerOpacityLUTEditor

getChannelNameAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm

getChannelNameAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

getChannelPosition() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

The overall channel position of the ROIs.

getChannelReordering() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm

getChannels() - Method in enum org.hkijena.jipipe.plugins.opencv.utils.OpenCvType

getChannelSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

getChannelSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

getChannelSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

getChannelSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

getChannelSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

getChannelSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

getChannelSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

getChannelSettings() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

getChannelSettings() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

getChannelSettings() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

getChannelSettings() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

getChannelShortName(int) - Method in interface org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.ColorSpace

Returns the channel name for a given channel index

getChannelShortName(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.GreyscaleColorSpace

getChannelShortName(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.HSBColorSpace

getChannelShortName(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.IgnoreColorSpace

getChannelShortName(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.LABColorSpace

getChannelShortName(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.RGBColorSpace

getChannelSizeAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

getChannelSizeAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

getChannelToSlotAssignment() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm

getChannelToSlotAssignment() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsAlgorithm

Deprecated.

getChart() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.BarBoxAndWhiskerCategoryJFreeChartPlotData

getChart() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.BarCategoryJFreeChartPlotData

getChart() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.BarStatisticalCategoryJFreeChartPlotData

getChart() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

getChart() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

getChart() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.LineCategoryJFreeChartPlotData

getChart() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.LineStatisticalCategoryJFreeChartPlotData

getChart() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.LineXYJFreeChartPlotData

getChart() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.Pie2DJFreeChartPlotData

getChart() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.Pie3DJFreeChartPlotData

getChart() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.ScatterXYJFreeChartPlotData

getChart() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.StackedBarCategoryJFreeChartPlotData

getChartPanel() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPlotDisplayComponent

getCheckBox() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopCheckBoxRibbonAction

getCheckerboardColor1() - Method in class org.hkijena.jipipe.plugins.imp.nodes.ConvertImpImageToImagePlusAlgorithm

getCheckerboardColor2() - Method in class org.hkijena.jipipe.plugins.imp.nodes.ConvertImpImageToImagePlusAlgorithm

getCheckerboardSize() - Method in class org.hkijena.jipipe.plugins.imp.nodes.ConvertImpImageToImagePlusAlgorithm

getCheckPeriod() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXConvergenceParameters

getChildParameterCollections() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

getChildParameterCollections() - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

getChildParameterCollections() - Method in class org.hkijena.jipipe.api.grouping.JsonAlgorithm

getChildParameterCollections() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccessGroupList

getChildParameterCollections() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeCustomParameterCollection

Returns all sub-parameter collections

getChildParameterCollections() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectInfoParameters

getChildren() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

getChildren() - Method in class org.hkijena.jipipe.plugins.scene3d.model.Scene3DGroupNode

getChunkSizeExpression() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm

getCitation() - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

getCitation() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

getCitation() - Method in class org.hkijena.jipipe.plugins.JIPipePrepackagedDefaultJavaPlugin

getClass0CountColumnName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

getClass0MeanColumnName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

getClass0SumColumnName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

getClass1CountColumnName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

getClass1MeanColumnName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

getClass1SumColumnName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

getClassAssignment() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingROI2DAlgorithm

getClassAssignment() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingROI3DAlgorithm

getClassDistance(Class<?>, Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

The number of hierarchy classes between two classes.

getClassifier() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

getClassifier() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.WekaClassifierParameter

getClassifier() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.WekaClassifierSettings

getClassifierSettings() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingLabels2DAlgorithm

getClassifierSettings() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingLabels2DAlgorithm2

getClassifierSettings() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingMask2DAlgorithm

getClassifierSettings() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingMask2DAlgorithm2

getClassifierSettings() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingROI2DAlgorithm

getClassifierSettings() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingROI3DAlgorithm

getCleanedMenuPath(String) - Static method in class org.hkijena.jipipe.utils.StringUtils

Cleans a menu path string

getClearedEventEmitter() - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache

getClearedEventEmitter() - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache

getClijParameters() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNode

getCloseMode() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.DocumentTab

getCloseMode() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.SingletonTab

getClosestSliceZero(ImagePlus, ImageSliceIndex) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Gets the slice closest to the requested slice index (zero-based).

getClusteringSettings() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm

getClusteringSettings() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm

getClusteringSettings() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm

getCode() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ModifyAnnotationScript

getCode() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SplitByAnnotationScript

getCode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.MacroWrapperAlgorithm

getCode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsScriptAlgorithm

getCode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge.FilterAndMergeRoiByStatisticsScriptAlgorithm

getCode() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptParameter

getCode(Path) - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptParameter

Gets the code.

getCode() - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.IteratingJythonScriptAlgorithm

getCode() - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.JythonScriptAlgorithm

getCode() - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.MergingJythonScriptAlgorithm

getCode() - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.SimpleIteratingJythonScriptAlgorithm

getCode() - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.IteratingPythonScriptAlgorithm

getCode() - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.MergingPythonScriptAlgorithm

getCode() - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.PythonScriptAlgorithm

getCode() - Method in class org.hkijena.jipipe.plugins.python.PythonUtils.RawPythonCode

getCode() - Method in class org.hkijena.jipipe.plugins.tables.nodes.ModifyAndMergeTablesScript

getCode() - Method in class org.hkijena.jipipe.plugins.tables.nodes.ModifyTablesScript

getCode() - Method in class org.hkijena.jipipe.plugins.tables.nodes.TablesFromScript

getCoefficient() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegImage

Return the B-spline coefficients of the full-size image.

getCollection() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

getColor() - Method in class org.hkijena.jipipe.api.run.JIPipeProjectRunSet

getColor() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

getColor() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.MonochromeJIPipeDesktopColorIcon

getColor() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopColorChooserButton.ColorChosenEvent

getColor() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters

getColor() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ArrowAnnotationGraphNode

getColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesExpressionAlgorithm

getColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesManuallyAlgorithm

getColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

getColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

getColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm.NewEdgesSettings

getColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentEdge

getColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

getColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel

Deprecated.

getColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking.SetToColorAlgorithm

getColor() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DIndexedMeshGeometry

getColor() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry

getColor() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

getColor() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DUnindexedMeshGeometry

getColor() - Method in interface org.hkijena.jipipe.plugins.scene3d.model.Scene3DGeometry

Gets the color of this geometry

getColor() - Method in class org.hkijena.jipipe.utils.ColorUtils.GradientStop

getColorAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

getColorChosenEventEmitter() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopColorChooserButton

getColorForGap(int, int, int) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

getColorInvalid() - Static method in class org.hkijena.jipipe.plugins.forms.ui.DataBatchStatusTableCellRenderer

getColorInvalidSelected() - Static method in class org.hkijena.jipipe.plugins.forms.ui.DataBatchStatusTableCellRenderer

getColorMap() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap

getColorMap() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelColorMapIcon

getColorMap() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToRGBAlgorithm

getColorMap() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorMapAlgorithm

getColorMap() - Method in class org.hkijena.jipipe.plugins.parameters.library.colors.ColorMapIcon

getColorMap() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

getColorMap() - Method in class org.hkijena.jipipe.plugins.plots.utils.ColorMapIcon

getColorMode() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

getColorMode() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

getColorMode() - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

getColorModelString(BufferedImage) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils

getColors() - Method in enum org.hkijena.jipipe.plugins.plots.utils.ColorMap

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorHSBData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorLABData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorRGBData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorHSBData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorLABData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorRGBData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorHSBData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorLABData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorRGBData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorHSBData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorLABData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorRGBData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorHSBData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorLABData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorRGBData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleData

getColorSpace() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

getColorSpaceAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

getColorSpaceAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

getColorSpaceOf(Class<? extends ImagePlusData>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

getColorUnvisited() - Static method in class org.hkijena.jipipe.plugins.forms.ui.DataBatchStatusTableCellRenderer

getColorVisited() - Static method in class org.hkijena.jipipe.plugins.forms.ui.DataBatchStatusTableCellRenderer

getColumn() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotationTableToPaths

getColumn() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

getColumn(int) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

Returns the column definition of given index

getColumn() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.Index

getColumnAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

getColumnAsDouble(String) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotDataSeries

Gets a copy of a column by name

getColumnAssignment() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableToImageAlgorithm

getColumnAssignments() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotSeriesEditor

getColumnAsString(String) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotDataSeries

Gets a copy of a column by name

getColumnC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

getColumnC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

getColumnC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

getColumnC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

getColumnC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

getColumnClass(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

The column class.

getColumnClass(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

getColumnClass(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableInfo

getColumnClass(int) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantTableModel

getColumnClass(int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableModel

getColumnClass(int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

getColumnClass(int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableModel

getColumnClass(int) - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerTableModel

getColumnClass(int) - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextTableModel

getColumnClass(int) - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

getColumnClass(int) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

getColumnClass(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

getColumnCopy(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Returns a column as vector.

getColumnCount() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

getColumnCount() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

getColumnCount() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableInfo

getColumnCount() - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantTableModel

getColumnCount() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableModel

getColumnCount() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

getColumnCount() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableModel

getColumnCount() - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerTableModel

getColumnCount() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextTableModel

getColumnCount() - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

getColumnCount() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

getColumnCount() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

getColumnCountAnnotation() - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm

getColumnFilter() - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSimpleAlgorithm

getColumnFilter() - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm

getColumnFilter() - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementMergingAlgorithm

getColumnFilter() - Method in class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableIntoColumnsAlgorithm

getColumnHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

getColumnIdentifiers(DefaultTableModel) - Static method in class org.hkijena.jipipe.utils.TableUtils

Gets the table's column names

getColumnIndex(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

getColumnIndex(String) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Returns the index of an existing column

getColumnInfo(int) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

getColumnMatching() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

getColumnMatching() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

getColumnMatching() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

getColumnMetadata() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

getColumnMetadata() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

getColumnMetadata() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

getColumnMetadata() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

getColumnMetadata() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

getColumnName(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

getColumnName(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

getColumnName(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableInfo

getColumnName(int) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantTableModel

getColumnName(int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableModel

getColumnName(int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

getColumnName(int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableModel

getColumnName(int) - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerTableModel

getColumnName(int) - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextTableModel

getColumnName() - Method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurementColumn

getColumnName() - Method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurementColumn

getColumnName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm.Entry

getColumnName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

getColumnName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

getColumnName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

getColumnName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

getColumnName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

getColumnName() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementColumn

getColumnName() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.MeasurementColumn

getColumnName(int) - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

getColumnName(int) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

getColumnName() - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.ExtractJsonDataAsTableAlgorithm.Entry

getColumnName() - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.TextDataToTableAlgorithm.Entry

getColumnName() - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm.Entry

getColumnName(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

getColumnName() - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2.Entry

getColumnNames() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

getColumnNamesAnnotation() - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm

getColumnNormalization() - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.ExtractJsonDataAsTableAlgorithm

getColumnNormalization() - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.TextDataToTableAlgorithm

getColumnNormalization() - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm

getColumnNormalization() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.UnMeltTableAlgorithm

getColumnOperation() - Method in class org.hkijena.jipipe.plugins.expressions.functions.ColumnOperationAdapterFunction

getColumnOperationById(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry

Returns an operation by ID

getColumnRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

getColumnReference(String) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Returns a column as vector.

getColumnReference(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Returns a column as vector.

getColumns() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm

getColumns() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

getColumns() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.MontageToStackAlgorithm

getColumns() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

getColumns() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromTableAlgorithm

getColumns() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm

getColumns() - Method in class org.hkijena.jipipe.plugins.tables.nodes.GenerateColumnAlgorithm

getColumns() - Method in class org.hkijena.jipipe.plugins.tables.nodes.GenerateTableFromExpressionAlgorithm

getColumns() - Method in class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableByColumnsAlgorithm

getColumnT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

getColumnT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

getColumnT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

getColumnT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

getColumnT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

getColumnText() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

getColumnWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

getColumnX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

getColumnX1() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

getColumnX1() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

getColumnX1() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

getColumnX1() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

getColumnX2() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

getColumnX2() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

getColumnY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

getColumnY1() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

getColumnY1() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

getColumnY1() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

getColumnY1() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

getColumnY2() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

getColumnY2() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

getColumnZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

getColumnZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

getColumnZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

getColumnZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

getColumnZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

getCombinationFunction() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SimplifyAnnotationsAlgorithm

getCompartment() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

getCompartment() - Method in class org.hkijena.jipipe.api.project.JIPipeProject.CompartmentAddedEvent

getCompartment() - Method in class org.hkijena.jipipe.api.project.JIPipeProject.CompartmentRemovedEvent

getCompartment() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

getCompartmentAddedEventEmitter() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

getCompartmentDisplayName() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns a display name for the compartment

getCompartmentDisplayNameOf(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns a human-readable name of the compartment.

getCompartmentGraph() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal.Snapshot

getCompartmentGraph() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

getCompartmentId() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm

getCompartmentName() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImagePlusResultImportRun

getCompartmentName() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.OMEImageResultImportRun

getCompartmentRemovedEventEmitter() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

getCompartments() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

getCompartmentsEditorDockLayout() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.DockLayoutSettings

getCompartmentsEditorDockLayoutTemplates() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.DockLayoutSettings

getCompartmentUUID() - Method in class org.hkijena.jipipe.api.project.JIPipeProject.CompartmentRemovedEvent

getCompartmentUUID() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getCompartmentUUIDInGraphAsString() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the compartment UUID in the graph as string.

getCompartmentUUIDInParentGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the compartment UUID within the current graph.

getCompartmentUUIDOf(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Gets the UUID of the compartment

getComponent() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

getComponent(Class<T>) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

getComponentDimension() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm

getComponentDimension() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

getComponentIdAnnotation() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.split.SplitFilamentsIntoConnectedComponentsAlgorithm

getComponentNameAnnotation() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

getComponentNameAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

getComponents() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Action

getComponentSupplier() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

getCompositeBlendLayers() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

getCompression() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm

getCompression() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEExporterSettings

getCompression() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMETIFFCompression

getCompression() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Video2DExporterRun

getCondaExecutable() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectCondaEnvPythonInstaller.Configuration

getCondition() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConditionalInverterAlgorithm

getCondition() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistrationAlgorithmRule

getConfig() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator

getConfiguration() - Method in class org.hkijena.jipipe.api.data.JIPipeSlotConfiguration.SlotConfigurationChangedEvent

getConfiguration() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun

getConfiguredCellposeEnvironment() - Method in interface org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2EnvironmentAccessNode

Gets the correct Python environment.

getConfiguredCellposeEnvironment() - Method in interface org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3EnvironmentAccessNode

Gets the correct Python environment.

getConfiguredIlastikEnvironment() - Method in interface org.hkijena.jipipe.plugins.ilastik.environments.IlastikEnvironmentAccessNode

Gets the correct OMERO environment.

getConfiguredOMEROCredentialsEnvironment() - Method in interface org.hkijena.jipipe.plugins.omero.OMEROCredentialAccessNode

Gets the correct OMERO environment.

getConfiguredOmniposeEnvironment() - Method in interface org.hkijena.jipipe.plugins.omnipose.OmniposeEnvironmentAccessNode

Gets the correct Python environment.

getConfiguredPythonAdapterEnvironment() - Method in interface org.hkijena.jipipe.plugins.python.algorithms.python.PythonEnvironmentAccessNode

Gets the correct JIPipe Python adapter environment.

getConfiguredPythonEnvironment() - Method in interface org.hkijena.jipipe.plugins.python.algorithms.python.PythonEnvironmentAccessNode

Gets the correct Python environment.

getConfiguredREnvironment() - Method in interface org.hkijena.jipipe.plugins.r.REnvironmentAccessNode

Gets the correct R environment.

getConfiguredTesseractOCREnvironment() - Method in class org.hkijena.jipipe.plugins.ijocr.nodes.TesseractOCRAlgorithm

getConfiguredTSOAXEnvironment() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

Gets the correct OMERO environment.

getConnectHighlight() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getConnection(JIPipeDataSlot, JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

getConnectivity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling2DAlgorithm

getConnectivity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling3DAlgorithm

getConnectivity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm

getConnectivity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.SplitLabelsConnectedComponents2DAlgorithm

getConnectivity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMaxima2DAlgorithm

getConnectivity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMaxima3DAlgorithm

getConnectivity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMinima2DAlgorithm

getConnectivity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMinima3DAlgorithm

getConnectivity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMaxima2DAlgorithm

getConnectivity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMaxima3DAlgorithm

getConnectivity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMinima2DAlgorithm

getConnectivity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMinima3DAlgorithm

getConnectivity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm

getConnectivity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm

getConnectivity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologicalReconstruction2DAlgorithm

getConnectivity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologicalReconstruction3DAlgorithm

getConnectivity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm

getConnectivity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm

getConnectivityInspector() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

getConnectNewVerticesToStartSettings() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm

getConnectOverDimensionLinearSettings() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm

getConsensusBitDepth(Collection<ImagePlus>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Returns the lowest ImageJ image type that can contain all images.

getConsensusPhysicalSizeUnit() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

Finds the common unit within the whole vertex set.

getConsensusPhysicalSizeUnit() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

Finds the common unit within the vertex.

getConsistencyWeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

getConstant() - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionConstantEntry

getConstant() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm.OutputType

getContact() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

getContent() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup

getContent() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.FormPanelEntry

getContent() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopMarkdownReader

getContent() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.DocumentTab

getContent() - Method in class org.hkijena.jipipe.JIPipeService.ExtensionContentAddedEvent

getContent() - Method in class org.hkijena.jipipe.JIPipeService.ExtensionContentRemovedEvent

getContent() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameter

getContentClass() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameter

getContentClass() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameter

getContentOrDefault(OMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.OptionalOMEROCredentialsEnvironment

getContentOrDefault(T) - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameter

Returns the content if enabled, otherwise the default value

getContentPane() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

getContentPanel() - Method in class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopTableEditor

getContentPanel() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentPanel

getContentPanel() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

getContents() - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

getContentString() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROAnnotationReferenceData

getContentStyle() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode

getContentSupplier() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.SingletonTab

getContentX() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

getContentY() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

getContext() - Method in interface org.hkijena.jipipe.api.JIPipeWorkbench

getContext() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry

getContext() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

getContext() - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

getContext() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

getContext() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

getContext() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDummyWorkbench

getContext() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

getContext() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopSplashScreen

getContext() - Method in class org.hkijena.jipipe.JIPipeGUICommand

getContext() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

getContextActions() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

List of context actions that are added to this collection.

getContextActions() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getContextHelpEventEmitter() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

getContextObject(Class<T>) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

getContextParent() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

Gets the parent object that is added during the creation of the UI

getContinueOnFailure() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

getContinueOnFailure() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

getContinueOnFailureExportFailedInputs() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

getContinueOnFailureExportFailedInputs() - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

getContinueOnFailureExportFailedInputs() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

getContinueOnFailureSettings() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

getContrastEnhancer() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

getContrastEnhancerSettings() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings

getContrastHigh() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

getContrastLow() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

getContrastThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm

getControlBorderColor() - Static method in class org.hkijena.jipipe.utils.UIUtils

getControlSize() - Method in class org.hkijena.jipipe.utils.ui.CheckBoxIcon

getControlSize() - Method in class org.hkijena.jipipe.utils.ui.CheckBoxMenuItemIcon

getControlTextColor() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

Returns the control text color.

getControlTextColor() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

Returns the control text color.

getConvergenceParameters() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

getConversionDistance(Class<? extends JIPipeData>, Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Returns the number of conversion steps.

getConverter() - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry.DataConverterEdge

The converter if the data types cannot be trivially converted

getCornerSize() - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopDropShadowRenderer

getCornerSize() - Method in class org.hkijena.jipipe.utils.ui.RoundedLineBorder

getCorrespondingOutputSlot(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm

Gets the output slot that correspond to the input slot.

getCorrespondingOutputSlot(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm

Gets the output slot that correspond to the input slot.

getCostesRandomizations() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

getCount() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm.HistogramBin

getCountAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

getCountColumnName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator

getCounterAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.CreateStackAlgorithm

getCountingColumn() - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm

getCounts() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.distribute.DistributeDataRandomlyByCountAlgorithm

getCP2Environment(JIPipeProject, OptionalPythonEnvironment) - Static method in class org.hkijena.jipipe.plugins.cellpose.CellposePlugin

getCP3Environment(JIPipeProject, OptionalPythonEnvironment) - Static method in class org.hkijena.jipipe.plugins.cellpose.CellposePlugin

getCreatedDimension() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackToDimensionMerger2Algorithm

getCreatedDimension() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackToDimensionMergerAlgorithm

getCreationTime() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal.Snapshot

getCreationTime() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournalSnapshot

getCreationTime() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal.Snapshot

getCreationTime() - Method in class org.hkijena.jipipe.desktop.app.history.JIPipeDesktopCurrentStateSnapshot

getCredentials() - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROGateway

getCriteriaMethod() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

getCropRegions() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

getCropRegions() - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

getCumulativeCount() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm.HistogramBin

getCumulativeWeightedCount() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm.HistogramBin

getCurlWeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

getCurrentActiveArea() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

getCurrentBackupPath() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeBackupApplicationSettings

getCurrentCache() - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantUI

getCurrentColor() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

getCurrentColorMap() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

getCurrentConnectionDragSource() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getCurrentConnectionDragTarget() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getCurrentContent() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

getCurrentData() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerTextAnnotationsPanel

getCurrentDataAnnotationColumn() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow.DownloadFullDataRun

getCurrentDataRow() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow.DownloadFullDataRun

getCurrentDirectory() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.FileChooserHistory

Get the current directory in history, or null if history is empty.

getCurrentDirectory() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNext

getCurrentExpressionValue() - Method in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderParameterUI

getCurrentImage() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

getCurrentImagePlus() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

getCurrentIterationStepIndex() - Method in interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationContext

Index of the currently handled iteration step

getCurrentIterationStepIndex() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMutableIterationContext

getCurrentlySelectedSingletonTabId() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Returns the currently selected singleton tab ID.

getCurrentlyVisiblePanelId(JIPipeDesktopDockPanel.PanelLocation, boolean) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

getCurrentMaskSlice() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

getCurrentMax() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl

getCurrentMin() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl

getCurrentMode() - Method in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderParameterUI

getCurrentPlot() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

getCurrentRewireDragSource() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

getCurrentRewireDragTarget() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

getCurrentRun() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

getCurrentRunWorker() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

getCurrentSlice() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin2D

getCurrentSlice() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

getCurrentSliceIndex() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

Returns the currently viewed slice position

getCurrentSlicePosition() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin2D

getCurrentSliceStats() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

getCurrentSnapshot() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal

getCurrentSnapshot() - Method in class org.hkijena.jipipe.api.history.JIPipeDummyGraphHistoryJournal

getCurrentSnapshot() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Gets the snapshot that represents the current state of the data

getCurrentSnapshot() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal

getCurrentState() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

getCurrentTool() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

getCurrentTool() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getCurrentTool() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

getCursor() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

getCursor() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool

getCursor() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

getCursor() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

getCustomAnnotationMatching() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

getCustomAnnotationMatching() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

getCustomAnnotationMatching() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

getCustomAnnotationMatching() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

getCustomBackupPath() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeBackupApplicationSettings

getCustomBeta() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseSettings

getCustomBlur() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseSettings

getCustomColorMap() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

getCustomColumns() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

getCustomColumns() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

getCustomColumns() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

getCustomColumns() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings

getCustomDescription() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference

getCustomDescription() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the custom description that is set by the user

getCustomDownsample() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseSettings

getCustomGBlur() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseSettings

getCustomHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableToImageAlgorithm

getCustomHMax() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm

getCustomHMin() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm

getCustomIcon() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

getCustomInstanceGenerator() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameter

getCustomIsParameterCollectionVisible() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

getCustomIsParameterVisible() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

getCustomMax() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings.ContrastEnhancerSettings

getCustomMax() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm

getCustomMax() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.CalibrationParameters

getCustomMax() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl

getCustomMenuRegistry() - Method in class org.hkijena.jipipe.JIPipe

getCustomMenuRegistry() - Method in interface org.hkijena.jipipe.JIPipeService

getCustomMenus() - Static method in class org.hkijena.jipipe.JIPipe

getCustomMin() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings.ContrastEnhancerSettings

getCustomMin() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm

getCustomMin() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.CalibrationParameters

getCustomMin() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl

getCustomName() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

getCustomName() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference

getCustomName() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

The current custom (user-defined) name

getCustomPoisson() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseSettings

getCustomRange() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.ImageJContrastEnhancerAlgorithm

getCustomRange() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo16BitAutoContrastAlgorithm

getCustomRange() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo8BitAutoContrastAlgorithm

getCustomSizeC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableToImageAlgorithm

getCustomSizeT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableToImageAlgorithm

getCustomSizeZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableToImageAlgorithm

getCustomText() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

getCustomThreshold() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.NucleiSegmentation3DAlgorithm

getCustomWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableToImageAlgorithm

getCycleFinderAlgorithm() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentCyclesToROIAlgorithm

getCycleFinderAlgorithm() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FilamentCyclesToComponentsAlgorithm

getCycleIdAnnotation() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FilamentCyclesToComponentsAlgorithm

getCycleIdAnnotation() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.split.SplitFilamentsIntoCyclesAlgorithm

getDarkBorderColor() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory

getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory

getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory

getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory

getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory

getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory

getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory

getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory

getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory

getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory

getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory

getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory

getDarkBorderColor() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory

The border color for algorithm nodes (dark theme)

getDarkBorderColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsNodeTypeCategory

getDarkFillColor() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory

getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory

getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory

getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory

getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory

getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory

getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory

getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory

getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory

getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory

getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory

getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory

getDarkFillColor() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory

The fill color for algorithm nodes (dark theme)

getDarkFillColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsNodeTypeCategory

getDarkIcons128BasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

getDarkIcons16BasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

getDarkIcons32BasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

getDarkIcons64BasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

getDarkIconURL() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

getData(Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataAnnotation

getData() - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.StoredEvent

getData(Class<T>) - Method in interface org.hkijena.jipipe.api.data.browser.JIPipeDataBrowser

Gets the store for the fully downloaded data

getData(Class<T>, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.data.browser.JIPipeDataBrowser

Gets the store for the fully downloaded data

getData(Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.browser.JIPipeLocalDataBrowser

getData(Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore

Gets the currently stored data.

getData(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore

Gets the currently stored data

getData(int, Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets the data stored in a specific row.

getData() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

getData() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow.DownloadFullDataRun

getData() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataPreview

Returns the stored data or null if it was already cleared

getData() - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData

getData() - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData

getData() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.datatypes.LegacyCellposeModelData

Deprecated.

getData() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.datatypes.LegacyCellposeSizeModelData

Deprecated.

getData() - Method in class org.hkijena.jipipe.plugins.ilastik.datatypes.IlastikModelData

getData() - Method in class org.hkijena.jipipe.plugins.strings.StringData

getData() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.DoubleArrayTableColumnData

getData() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.FloatArrayTableColumnData

getData() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.StringArrayTableColumnData

getData() - Method in class org.hkijena.jipipe.utils.search.RankedData

getData_(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore

Gets the currently stored data

getDataAnnotation(int, String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets a data annotation

getDataAnnotation(int, int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets a data annotation

getDataAnnotation() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeDataTableDataSource

Optional: Data annotation

getDataAnnotation() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeWeakDataTableDataSource

Optional: Data annotation

getDataAnnotation() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotPreview

The data annotation (optional)

getDataAnnotationColumnArray_(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets the annotation data column DOES NOT ENSURE that the output size is equal to getRowCount() NOT THREAD-SAFE, REQUIRES A READ LOCK!

getDataAnnotationColumnNames() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

getDataAnnotationColumns() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

getDataAnnotationColumns() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableInfo

getDataAnnotationColumns() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

getDataAnnotationFilter() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PullDataTableAnnotations

getDataAnnotationFilter() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PushDataTableAnnotations

getDataAnnotationItemStore(int, String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets a data annotation as JIPipeDataItemStore

getDataAnnotationItemStoreMap_(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Returns a map of all data annotations as JIPipeDataItemStore NOT THREAD-SAFE.

getDataAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithData

getDataAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableArchive

getDataAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableDirectory

getDataAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PullDataTableAnnotations

getDataAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PushDataTableAnnotations

getDataAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.ImportJIPipeSlotFolderAlgorithm

getDataAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

getDataAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

getDataAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

getDataAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings

getDataAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithmIterationStepGenerationSettings

getDataAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

getDataAnnotations(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets the list of all data annotations in the specified row

getDataAnnotations(Collection<Integer>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets the list of all data annotations in the specified row

getDataAnnotations() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableRowInfo

getDataAnnotationStores() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopDataTableRowDisplayUtil

getDataAsDetailedString() - Method in interface org.hkijena.jipipe.api.data.browser.JIPipeDataBrowser

Gets the detailed string representation of the data

getDataAsDetailedString(JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.data.browser.JIPipeDataBrowser

Gets the detailed string representation of the data

getDataAsDetailedString(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.browser.JIPipeLocalDataBrowser

getDataAsDouble(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.DoubleArrayTableColumnData

getDataAsDouble(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.FloatArrayTableColumnData

getDataAsDouble(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RelabeledTableColumnData

getDataAsDouble(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RowIndexTableColumnData

getDataAsDouble(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.StringArrayTableColumnData

getDataAsDouble(int) - Method in interface org.hkijena.jipipe.plugins.tables.datatypes.TableColumnData

Returns as many data entries as rows

getDataAsDouble(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ZeroTableColumnData

getDataAsDouble(int) - Method in class org.hkijena.jipipe.plugins.tables.TableColumnDataReference

getDataAsObjectList() - Method in interface org.hkijena.jipipe.plugins.tables.datatypes.TableColumnData

Returns the data as list of objects The objects are strings or numbers depending on the column type

getDataAsString() - Method in interface org.hkijena.jipipe.api.data.browser.JIPipeDataBrowser

Gets the string representation of the data

getDataAsString(JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.data.browser.JIPipeDataBrowser

Gets the string representation of the data

getDataAsString(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.browser.JIPipeLocalDataBrowser

getDataAsString(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.DoubleArrayTableColumnData

getDataAsString(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.FloatArrayTableColumnData

getDataAsString(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RelabeledTableColumnData

getDataAsString(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RowIndexTableColumnData

getDataAsString(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.StringArrayTableColumnData

getDataAsString(int) - Method in interface org.hkijena.jipipe.plugins.tables.datatypes.TableColumnData

Returns as many data entries as rows

getDataAsString(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ZeroTableColumnData

getDataAsString(int) - Method in class org.hkijena.jipipe.plugins.tables.TableColumnDataReference

getDataBatchAssistantUI() - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantBatchPanel

getDataBatchAssistantUI() - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantInputPreviewPanel

getDataBatches() - Method in class org.hkijena.jipipe.api.JIPipeDataBatchGenerationResult

getDataBatchForms() - Method in class org.hkijena.jipipe.plugins.forms.ui.FormsDialog

getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm

getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm

getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm

getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm

getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm

getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.plugins.forms.algorithms.IteratingFormProcessorAlgorithm

getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.plugins.forms.algorithms.MergingFormProcessorAlgorithm

getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.plugins.forms.algorithms.SimpleIteratingFormProcessorAlgorithm

getDataBatchList() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableUI

getDataBrowser() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewer

Gets the current data browser

getDataBrowser() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow

getDataClass() - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataAnnotation

getDataClass() - Method in interface org.hkijena.jipipe.api.data.browser.JIPipeDataBrowser

The data class

getDataClass() - Method in class org.hkijena.jipipe.api.data.browser.JIPipeLocalDataBrowser

getDataClass() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo

getDataClass() - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore

getDataClass() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

getDataClass(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets the true type of the data at given row

getDataClass() - Method in class org.hkijena.jipipe.plugins.parameters.api.graph.SlotMapParameterCollection

getDataContainer() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.CustomColoc2.ColocResult

getDataContext(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets the context of the data in the row

getDataContext() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableRowInfo

getDataContexts() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

getDataConverterFunction() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

getDataDirectoryEnvironment() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImageJSampleAlgorithm

getDataInfo() - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataAnnotation

getDataInfo(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Returns Information about the true data type that is stored at given row

getDataInfo() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.DataTypeDeselectedEvent

getDataInfo() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.DataTypeSelectedEvent

getDataInputSlotCount() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

Returns the number of input slots that are not parameter slots.

getDataInputSlots() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

getDataInputSlots() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Method that can be overwritten by child classes.

getDataInputSlots() - Method in class org.hkijena.jipipe.plugins.forms.algorithms.IteratingFormProcessorAlgorithm

getDataInputSlots() - Method in class org.hkijena.jipipe.plugins.forms.algorithms.MergingFormProcessorAlgorithm

getDataInputSlots() - Method in class org.hkijena.jipipe.plugins.forms.algorithms.SimpleIteratingFormProcessorAlgorithm

getDataItemStore() - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataAnnotation

getDataItemStore(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets the virtual data container at given row

getDataManagerFacility() - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROGateway

getDataOverlays() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

Gets only the overlays that are of type JIPipeData

getDataReference() - Method in class org.hkijena.jipipe.api.data.utils.JIPipeWeakDataReferenceData

getDataset() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.ImageJ2DatasetData

Gets the data set

getDataset(long, long) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROGateway

Gets a dataset

getDataset() - Method in class org.hkijena.jipipe.plugins.r.algorithms.ImportRDatasetAlgorithm

getDatasetFilter() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportOMEZARRFromURIAsImagePlusAlgorithm

getDatasetFilter() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportOMEZARRFromZipDirectoryAsImagePlusAlgorithm

getDatasetId() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMERODatasetReferenceData

getDatasetIds() - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMERODatasetReferenceDataSource

getDataSetMatching() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings

getDatasetNameAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportOMEZARRFromURIAsImagePlusAlgorithm

getDatasetNameAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportOMEZARRFromZipDirectoryAsImagePlusAlgorithm

getDataSource() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

getDataSource() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

Gets the current data source if any is set

getDataSource() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

getDataSourceMenuLocation() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

getDataSourceMenuLocation() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

If the node is of category DataSourceNodeTypeCategory, allows to re-assign them to a new menu If JIPipeEmptyData is returned, no re-assignment is applied

getDataStoreReference() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGenerationRun

getDataTable(JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.data.browser.JIPipeDataTableBrowser

Gets the whole data table

getDataTable(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.browser.JIPipeLocalDataTableBrowser

getDataTable() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeDataTableDataSource

The data slot where the data is sourced

getDataTable() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeWeakDataTableDataSource

The data slot where the data is sourced

getDataTable() - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantDataTableUI

getDataTable() - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantTableModel

getDataTable() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToZIPExporterRun

getDataTable() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopDataTableRowDisplayUtil

getDataTable() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableModel

getDataTable() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableUI

getDataTable() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableUI

getDataTable() - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerDataTableUI

getDataTable() - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerTableModel

getDataTableBrowser() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewer

Gets the current data table browser

getDataTableBrowser() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow

getDataTableInfo() - Method in interface org.hkijena.jipipe.api.data.browser.JIPipeDataTableBrowser

Gets the data table info

getDataTableInfo() - Method in class org.hkijena.jipipe.api.data.browser.JIPipeLocalDataTableBrowser

getDataTables() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToFilesByMetadataExporterRun

getDataTables() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToOutputExporterRun

getDataTableTooltip(JIPipeDataTable) - Static method in class org.hkijena.jipipe.utils.TooltipUtils

Creates a tooltip for an JIPipeDataSlot

getDataTooltip(JIPipeDataInfo) - Static method in class org.hkijena.jipipe.utils.TooltipUtils

Creates a tooltip for data

getDataType() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataRowFolder

getDataType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateZeroImage

getDataTypeDeselectedEventEmitter() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker

getDataTypeId() - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter

getDataTypeId() - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter

getDataTypeInfo() - Method in interface org.hkijena.jipipe.api.data.browser.JIPipeDataBrowser

The data class info

getDatatypeList() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddAlgorithmSlotPanel

getDataTypeOf(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

Returns the true data type (if available) or the accepted data type of the given row

getDataTypePicker() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.DataTypeDeselectedEvent

getDataTypePicker() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.DataTypeSelectedEvent

getDataTypePicker() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.SelectedDataTypesChangedEvent

getDatatypeRegisteredEventEmitter() - Method in class org.hkijena.jipipe.JIPipe

getDatatypeRegisteredEventEmitter() - Method in interface org.hkijena.jipipe.JIPipeService

getDatatypeRegistry() - Method in class org.hkijena.jipipe.JIPipe

getDatatypeRegistry() - Method in interface org.hkijena.jipipe.JIPipeService

getDataTypes() - Static method in class org.hkijena.jipipe.JIPipe

getDataTypesByMenuPaths() - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Gets the registered data types, grouped by their menu paths

getDataTypeSelectedEventEmitter() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker

getDataViewer() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

getDataViewerWindow() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewer

GetDateDayFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.datetime

GetDateDayFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.datetime.GetDateDayFunction

GetDateMonthFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.datetime

GetDateMonthFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.datetime.GetDateMonthFunction

getDateTime() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification

getDateTime() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableLogEntry

GetDateYearFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.datetime

GetDateYearFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.datetime.GetDateYearFunction

getDeactivatedAlgorithms() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Returns a list of all nodes that cannot be executed or are deactivated by the user.

getDeactivatedNodes(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Gets all algorithms and all dependent algorithms that are missing inputs or are deactivated by the user

getDeactivatedNodes(Set<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Gets all algorithms and all dependent algorithms that are missing inputs or are deactivated by the user

getDeactivatedPlugins() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry.Settings

getDecimals() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.RoundFloatImageAlgorithm

getDeclaredBy(JIPipeDependency) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Returns all data infos added by the dependency

getDeclaredBy(JIPipeDependency) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Gets all algorithms declared by the dependency

getDeclaredFieldValue(String, Object) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

Gets the value of a field

getDeclaredFieldValue(String, Object, Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

Gets the value of a field

getDeclaredStaticFieldValue(String, Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

Gets the value of a field

getDefaultAlgorithmUIActionRequestedEventEmitter() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getDefaultAnimationFPS() - Method in class org.hkijena.jipipe.plugins.imageviewer.settings.LegacyImageViewer2DUIApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.api.settings.JIPipeDefaultApplicationsSettingsSheet

Returns one of the predefined categories

getDefaultCategory() - Method in class org.hkijena.jipipe.api.settings.JIPipeDefaultProjectSettingsSheet

Returns one of the predefined categories

getDefaultCategory() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectDirectoriesSettingsSheetWrapper

getDefaultCategory() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectMetadataSettingsSheetWrapper

getDefaultCategory() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectParametersSettingsSheetWrapper

getDefaultCategory() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectPermissionsSettingsSheetWrapper

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.cellpose.Cellpose2PluginApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.cellpose.Cellpose3PluginApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePluginProjectSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironmentApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.filesystem.JIPipeFilesystemPluginApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ImageViewerUIROI3DDisplayApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.FilamentsPluginProjectSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.ImageViewerUIFilamentDisplayApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.TSOAXApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.ijocr.settings.OCRPluginProjectSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.ijocr.settings.TesseractOCRApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUISpotsDisplayApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUITracksDisplayApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginProjectSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesProjectSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageViewerUIROI2DDisplayApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.imageviewer.settings.ImageViewerGeneralUIApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.imageviewer.settings.LegacyImageViewer2DUIApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.napari.NapariPluginApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginProjectSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginProjectSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.processes.JIPipeProcessesPluginApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonPluginAdapterApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.python.PythonPluginApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.python.PythonPluginProjectSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.r.RPluginApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.r.RPluginProjectSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeBackupApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDataStorageProjectSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDownloadsApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeExtensionApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeHistoryJournalApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNodeTemplateApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectAuthorsApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectDefaultsApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

getDefaultCategory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeTableViewerUIApplicationSettings

getDefaultContent() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormHelpPanel

getDefaultCredentials() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginApplicationSettings

getDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

getDefaultDataViewer(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Gets the default data viewer

getDefaultEdgeVisibility() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

getDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.cellpose.Cellpose2PluginApplicationSettings

getDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.cellpose.Cellpose3PluginApplicationSettings

getDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.TSOAXApplicationSettings

getDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.ijocr.settings.TesseractOCRApplicationSettings

getDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

getDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesApplicationSettings

getDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.napari.NapariPluginApplicationSettings

getDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginApplicationSettings

getDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonPluginAdapterApplicationSettings

getDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.python.PythonPluginApplicationSettings

getDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.r.RPluginApplicationSettings

getDefaultExporterFor(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry

Gets the default exporter for a data class

getDefaultImporterFor(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry

Gets the default importer for a data class

getDefaultInstallationPath(Path) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

getDefaultParameterCollectionDescription() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccessGroup

getDefaultParameterCollectionDescription() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeNamedParameterCollection

A default description.

getDefaultParameterCollectionName() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccessGroup

getDefaultParameterCollectionName() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeNamedParameterCollection

A default name.

getDefaultQuickRunThreads() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

getDefaultRunThreads() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

getDefaultRuntimePartition() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration

getDefaultSortOrder() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.SortRowsByAnnotationsAlgorithm

getDefaultTemplateProject() - Static method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

Creates a new project instance based on the current template selection

getDefaultTool() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

getDefaultValues() - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm

getDeletedLabel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByThicknessAlgorithm

getDelta() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

getDependencies() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

getDependencies() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

getDependencies() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo

getDependencies() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo

getDependencies() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Gets all dependencies of all algorithms

getDependencies() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns a list of all dependencies this algorithm currently has.

getDependencies() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

Returns all dependencies

getDependencies() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

getDependencies() - Method in interface org.hkijena.jipipe.JIPipeDependency

List of JIPipe dependencies.

getDependencies() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

getDependencies() - Method in class org.hkijena.jipipe.JIPipeMutableDependency

getDependencies() - Method in class org.hkijena.jipipe.plugins.artifacts.ArtifactsPlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

getDependencies() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.core.CorePlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.forms.FormsPlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.ij3d.IJ3DPlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsPlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingPlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.ijocr.OCRPlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo

getDependencies() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo

getDependencies() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.TrackMatePlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.ijweka.WekaPlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.ilastik.IlastikPlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

getDependencies() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2Plugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.ImageJAlgorithmsPlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesPlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2AlgorithmInfo

getDependencies() - Method in class org.hkijena.jipipe.plugins.plots.PlotsPlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.r.RPlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.scene3d.Scene3DPlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.tables.TablesPlugin

getDependencies() - Method in class org.hkijena.jipipe.plugins.utils.UtilitiesPlugin

getDependencyAlgorithmIds() - Method in class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask

getDependencyCitations() - Method in class org.hkijena.jipipe.api.compartments.JIPipeCompartmentsPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.api.grouping.GroupingPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

getDependencyCitations() - Method in class org.hkijena.jipipe.api.looping.LoopingPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Returns all dependent work

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.annotation.AnnotationsPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.artifacts.ArtifactsPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.batchassistant.BatchAssistantPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.core.CorePlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.dataenvironment.DataDirectoriesPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.dev.DevelopmentPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.filesystem.FilesystemPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.forms.FormsPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.graphannotation.GraphAnnotationPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.ij3d.IJ3DPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.ijocr.OCRPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.TrackMatePlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.ijweka.WekaPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.ilastik.IlastikPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2Plugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.ImageJAlgorithmsPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.imp.ImpPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionLoaderPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.multiparameters.MultiParameterAlgorithmsPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.multiparameters.MultiParametersPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.napari.NapariPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplateBoxToolPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.opencv.OpenCvPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.parameters.StandardParametersPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.pipelinerender.PipelineRenderPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.plots.PlotsPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.processes.ProcessesPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.python.CorePythonPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.python.PythonPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.r.RPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.scene3d.Scene3DPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.settings.StandardSettingsPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.strings.StringsPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.tables.TablesPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.tools.ToolsPlugin

getDependencyCitations() - Method in class org.hkijena.jipipe.plugins.utils.UtilitiesPlugin

getDependencyDatatypeClasses() - Method in class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask

getDependencyDatatypeIds() - Method in class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask

getDependencyGraph() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

Returns a directed graph of all dependencies.

getDependencyId() - Method in class org.hkijena.jipipe.api.compartments.JIPipeCompartmentsPlugin

getDependencyId() - Method in class org.hkijena.jipipe.api.grouping.GroupingPlugin

getDependencyId() - Method in class org.hkijena.jipipe.api.looping.LoopingPlugin

getDependencyId() - Method in interface org.hkijena.jipipe.JIPipeDependency

getDependencyId() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

getDependencyId() - Method in class org.hkijena.jipipe.JIPipeMutableDependency

getDependencyId() - Method in class org.hkijena.jipipe.plugins.annotation.AnnotationsPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.artifacts.ArtifactsPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.batchassistant.BatchAssistantPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.core.CorePlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.dataenvironment.DataDirectoriesPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.dev.DevelopmentPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.filesystem.FilesystemPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.forms.FormsPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.graphannotation.GraphAnnotationPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.ij3d.IJ3DPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.ijocr.OCRPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.TrackMatePlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.ijweka.WekaPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.ilastik.IlastikPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2Plugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.ImageJAlgorithmsPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.imp.ImpPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionLoaderPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.multiparameters.MultiParameterAlgorithmsPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.multiparameters.MultiParametersPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.napari.NapariPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplateBoxToolPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.opencv.OpenCvPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.parameters.StandardParametersPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.pipelinerender.PipelineRenderPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.plots.PlotsPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.processes.ProcessesPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.python.CorePythonPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.python.PythonPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.r.RPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.scene3d.Scene3DPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.settings.StandardSettingsPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.strings.StringsPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.tables.TablesPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.tools.ToolsPlugin

getDependencyId() - Method in class org.hkijena.jipipe.plugins.utils.UtilitiesPlugin

getDependencyLocation() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

getDependencyLocation() - Method in interface org.hkijena.jipipe.JIPipeDependency

Gets the location of the JAR/JSON that defined the dependency

getDependencyLocation() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

getDependencyLocation() - Method in class org.hkijena.jipipe.JIPipeMutableDependency

getDependencyProvides() - Method in class org.hkijena.jipipe.api.compartments.JIPipeCompartmentsPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.api.grouping.GroupingPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.api.looping.LoopingPlugin

getDependencyProvides() - Method in interface org.hkijena.jipipe.JIPipeDependency

The list of alternative IDs that are covered by this dependency

getDependencyProvides() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.JIPipeMutableDependency

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.annotation.AnnotationsPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.artifacts.ArtifactsPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.batchassistant.BatchAssistantPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.core.CorePlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.dataenvironment.DataDirectoriesPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.dev.DevelopmentPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.filesystem.FilesystemPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.forms.FormsPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.graphannotation.GraphAnnotationPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.ij3d.IJ3DPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.ijocr.OCRPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.TrackMatePlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.ijweka.WekaPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.ilastik.IlastikPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2Plugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.ImageJAlgorithmsPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.imp.ImpPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionLoaderPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.multiparameters.MultiParameterAlgorithmsPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.multiparameters.MultiParametersPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.napari.NapariPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplateBoxToolPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.opencv.OpenCvPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.parameters.StandardParametersPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.pipelinerender.PipelineRenderPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.plots.PlotsPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.processes.ProcessesPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.python.CorePythonPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.python.PythonPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.r.RPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.scene3d.Scene3DPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.settings.StandardSettingsPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.strings.StringsPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.tables.TablesPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.tools.ToolsPlugin

getDependencyProvides() - Method in class org.hkijena.jipipe.plugins.utils.UtilitiesPlugin

getDependencyVersion() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

getDependencyVersion() - Method in interface org.hkijena.jipipe.JIPipeDependency

getDependencyVersion() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

getDependencyVersion() - Method in class org.hkijena.jipipe.JIPipeMutableDependency

getDependencyVersion() - Method in class org.hkijena.jipipe.plugins.JIPipePrepackagedDefaultJavaPlugin

getDepth() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.layout.MSTGraphAutoLayoutImplementation.Edge

getDepth() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.layout.MSTGraphAutoLayoutImplementation.Node

getDepth() - Method in class org.hkijena.jipipe.plugins.opencv.nodes.ConvertDepthAlgorithm

getDepth() - Method in enum org.hkijena.jipipe.plugins.opencv.utils.OpenCvType

getDescription() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory

getDescription() - Method in class org.hkijena.jipipe.api.compartments.JIPipeCompartmentsPlugin

getDescription() - Method in interface org.hkijena.jipipe.api.compat.ImageJDataExporter

A documentation description.

getDescription() - Method in interface org.hkijena.jipipe.api.compat.ImageJDataImporter

A documentation description.

getDescription() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation

getDescription() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo

getDescription() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot

getDescription() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

getDescription() - Method in interface org.hkijena.jipipe.api.data.JIPipeLegacyDataOperation

getDescription() - Method in class org.hkijena.jipipe.api.grouping.GroupingPlugin

getDescription() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

getDescription(JIPipeParameterTree) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference

Gets the name or custom name.

getDescription() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess

getDescription() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup

getDescription() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal.Snapshot

getDescription() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournalSnapshot

getDescription() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal.Snapshot

getDescription() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

getDescription() - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

getDescription() - Method in class org.hkijena.jipipe.api.looping.LoopingPlugin

getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory

getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory

getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory

getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory

getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory

getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory

getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory

getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory

getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory

getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory

getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory

getDescription() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewCompartmentNodeDatabaseEntry

getDescription() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

getDescription() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

getDescription() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

getDescription() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

getDescription() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

getDescription() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry

getDescription() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo

getDescription() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

getDescription() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

Returns the algorithm description

getDescription() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory

A description

getDescription() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification

getDescription() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterTypeInfo

getDescription() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess

getDescription() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess

getDescription() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

getDescription() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess

Returns a description

getDescription() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterGenerator

getDescription() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

getDescription() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterTypeInfo

getDescription() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

getDescription() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectDirectories.DirectoryEntry

getDescription() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ColumnOperationEntry

getDescription() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ExpressionFunctionEntry

getDescription() - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry.InstallerEntry

getDescription() - Method in class org.hkijena.jipipe.api.run.JIPipeProjectRunSet

getDescription() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

getDescription() - Method in interface org.hkijena.jipipe.api.settings.JIPipeSettingsSheet

Description of this settings sheet

getDescription() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

getDescription() - Method in class org.hkijena.jipipe.desktop.api.nodes.JIPipeDesktopNodeQuickAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.PinnedDummyNodeTypeCategory

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.TemplatesDummyNodeTypeCategory

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddBookmarkNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewCompartmentUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewParameterSetNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.ClearCacheNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.CollapseIOInterfaceNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DeleteCompartmentUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DeleteNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisablePassThroughNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableSaveOutputsNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableVirtualOutputNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnablePassThroughNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableSaveOutputsNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableVirtualOutputsNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.ExportCompartmentAsJsonNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.GroupNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.InvertSelectionNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.IsolateNodesUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.JsonAlgorithmToGroupNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.LockNodeLocationSizeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.LowerUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIDownContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUILeftContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIRightContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIUpContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeContextActionWrapperUIContextAction

getDescription() - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.OpenCacheBrowserInWindowUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RaiseUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RemoveBookmarkNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RunAndShowIntermediateResultsNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RunAndShowResultsNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SelectAllNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SelectAndMoveNodeHereNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SendToBackgroundUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SendToForegroundUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UnlockNodeLocationSizeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheOnlyPredecessorsNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheShowIntermediateNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsCopyNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsCutNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsPasteNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphCopyNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphCutNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphDuplicateNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphPasteNodeUIContextAction

getDescription() - Method in class org.hkijena.jipipe.desktop.app.history.JIPipeDesktopCurrentStateSnapshot

getDescription() - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderPackage

getDescription() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectDirectoriesSettingsSheetWrapper

getDescription() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectMetadataSettingsSheetWrapper

getDescription() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectParametersSettingsSheetWrapper

getDescription() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectPermissionsSettingsSheetWrapper

getDescription() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddParameterDialog.Settings

getDescription() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterKeyPickerUI.ParameterEntry

getDescription() - Method in class org.hkijena.jipipe.desktop.commons.components.parameters.JIPipeDesktopDynamicParameterEditorDialog.ParameterEntry

getDescription() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

getDescription() - Method in class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency

getDescription() - Method in class org.hkijena.jipipe.plugins.annotation.AnnotationsPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.artifacts.ArtifactsPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.batchassistant.BatchAssistantPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.cellpose.Cellpose2PluginApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.cellpose.Cellpose3PluginApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePluginProjectSettings

getDescription() - Method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseType

getDescription() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.core.CorePlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.core.data.CopyContainingFolderDataImportOperation

getDescription() - Method in class org.hkijena.jipipe.plugins.core.data.DefaultDataDisplayOperation

getDescription() - Method in class org.hkijena.jipipe.plugins.core.data.OpenContainingFolderDataImportOperation

getDescription() - Method in class org.hkijena.jipipe.plugins.core.data.OpenInNativeApplicationDataImportOperation

getDescription() - Method in class org.hkijena.jipipe.plugins.dataenvironment.DataDirectoriesPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironmentApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.dev.DevelopmentPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionConstantEntry

getDescription() - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionOperatorEntry

getDescription() - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameterVariableInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.expressions.ParameterInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.filesystem.FilesystemPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.filesystem.JIPipeFilesystemPluginApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.filesystem.resultanalysis.CopyPathDataDisplayOperation

getDescription() - Method in class org.hkijena.jipipe.plugins.filesystem.resultanalysis.OpenPathDataDisplayOperation

getDescription() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.ParameterFormData

getDescription() - Method in class org.hkijena.jipipe.plugins.forms.FormsPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.graphannotation.GraphAnnotationPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.ij3d.display.AddROI3DToManagerDataDisplayOperation

getDescription() - Method in class org.hkijena.jipipe.plugins.ij3d.IJ3DPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ImageViewerUIROI3DDisplayApplicationSettings

getDescription() - Method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurementColumn

getDescription() - Method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurementColumn

getDescription() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsNodeTypeCategory

getDescription() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.FilamentsPluginProjectSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.ImageViewerUIFilamentDisplayApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.TSOAXApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.ijocr.OCRPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.ijocr.settings.OCRPluginProjectSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.ijocr.settings.TesseractOCRApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.trackscheme.ShowTrackSchemeDataDisplayOperation

getDescription() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUISpotsDisplayApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUITracksDisplayApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.TrackMatePlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.ijweka.WekaPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.ilastik.IlastikPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginProjectSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2Plugin

getDescription() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.ImageJAlgorithmsPlugin

getDescription() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementColumn

getDescription() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OMEAccessorTemplate

getDescription() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.AddToROIManagerDataDisplayOperation

getDescription() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInImageJ3DViewerDataDisplayOperation

getDescription() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInImageJDataDisplayOperation

getDescription() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInNapariDataDisplayOperation

getDescription() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImportImageJPathDataDisplayOperation

getDescription() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesProjectSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageViewerUIROI2DDisplayApplicationSettings

getDescription() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.Measurement

getDescription() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.MeasurementColumn

getDescription() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawer2DTool

getDescription() - Method in class org.hkijena.jipipe.plugins.imageviewer.settings.ImageViewerGeneralUIApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.imageviewer.settings.LegacyImageViewer2DUIApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.imp.ImpPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionLoaderPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.multiparameters.MultiParameterAlgorithmsPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.multiparameters.MultiParametersPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.napari.NapariPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.napari.NapariPluginApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.nodeexamples.LoadExampleContextMenuAction

getDescription() - Method in class org.hkijena.jipipe.plugins.nodetemplate.AddTemplateContextMenuAction

getDescription() - Method in class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplateBoxToolPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage

getDescription() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROAnnotationReferenceData

getDescription() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMERODatasetReferenceData

getDescription() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROImageReferenceData

getDescription() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROProjectReferenceData

getDescription() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

getDescription() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginProjectSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginProjectSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.opencv.OpenCvPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameterItemParameterAccess

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.EnumParameterGenerator

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.EnumParameterTypeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterInputAccess

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterOutputAccess

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterParameterAccess

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterKeyAccess

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterValueAccess

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanParameterTypeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanPrimitiveParameterTypeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ByteParameterTypeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BytePrimitiveParameterTypeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.DoubleParameterTypeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.DoublePrimitiveParameterTypeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.FloatParameterTypeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.FloatPrimitiveParameterTypeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.IntParameterTypeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.IntPrimitiveParameterTypeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.LongParameterTypeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.LongPrimitiveParameterTypeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.NumberRangeParameterGenerator

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ShortParameterTypeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ShortPrimitiveParameterTypeInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ParameterColumn

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableCellAccess

getDescription() - Method in class org.hkijena.jipipe.plugins.parameters.StandardParametersPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.pipelinerender.PipelineRenderPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2AlgorithmInfo

getDescription() - Method in class org.hkijena.jipipe.plugins.plots.PlotsPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.plots.ui.resultanalysis.OpenPlotInJIPipeDataDisplayOperation

getDescription() - Method in class org.hkijena.jipipe.plugins.processes.JIPipeProcessesPluginApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.processes.ProcessesPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonPluginAdapterApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.python.CorePythonPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.python.PythonPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.python.PythonPluginApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.python.PythonPluginProjectSettings

getDescription() - Method in enum org.hkijena.jipipe.plugins.r.algorithms.ImportRDatasetAlgorithm.Dataset

getDescription() - Method in class org.hkijena.jipipe.plugins.r.RPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.r.RPluginApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.r.RPluginProjectSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.scene3d.Scene3DPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeBackupApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDataExporterApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDataStorageProjectSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDefaultCacheDisplayApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDefaultResultImporterApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDownloadsApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeExtensionApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeHistoryJournalApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNodeTemplateApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectAuthorsApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectDefaultsApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeTableViewerUIApplicationSettings

getDescription() - Method in class org.hkijena.jipipe.plugins.settings.StandardSettingsPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.strings.StringsPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.tables.display.CacheAwareOpenResultsTableInJIPipeDataDisplayOperation

getDescription() - Method in class org.hkijena.jipipe.plugins.tables.display.OpenResultsTableInImageJDataDisplayOperation

getDescription() - Method in class org.hkijena.jipipe.plugins.tables.display.OpenResultsTableInJIPipeTabDataDisplayOperation

getDescription() - Method in class org.hkijena.jipipe.plugins.tables.TablesPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.tools.ToolsPlugin

getDescription() - Method in class org.hkijena.jipipe.plugins.utils.contextmenu.ParameterExplorerContextMenuAction

getDescription() - Method in class org.hkijena.jipipe.plugins.utils.display.ImportJIPipeProjectDataDisplayOperation

getDescription() - Method in class org.hkijena.jipipe.plugins.utils.UtilitiesPlugin

getDescriptionAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm

getDescriptionAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm

getDescriptionAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROPlateReferenceAlgorithm

getDescriptionAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm

getDescriptionAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

getDescriptionOf(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData

Returns the description of a data type

getDescriptionOf(Class<? extends JIPipeGraphNode>) - Static method in class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo

Returns the description of an algorithm

getDesktopColor() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

Returns the desktop color.

getDesktopColor() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

Returns the desktop color.

getDesktopProjectWorkbench() - Method in interface org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbenchAccess

getDesktopRenderingHints() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getDesktopRenderingHints() - Static method in class org.hkijena.jipipe.utils.UIUtils

getDesktopWorkbench() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

getDesktopWorkbench() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow

getDesktopWorkbench() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopExternalEnvironmentInstaller

getDesktopWorkbench() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopMenuExtension

getDesktopWorkbench() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCacheManagerUI

getDesktopWorkbench() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopDataTableRowDisplayUtil

getDesktopWorkbench() - Method in class org.hkijena.jipipe.desktop.app.components.JIPipeDesktopAuthorProfileButton

getDesktopWorkbench() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getDesktopWorkbench() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbenchPanel

getDesktopWorkbench() - Method in interface org.hkijena.jipipe.desktop.app.JIPipeDesktopWorkbenchAccess

getDesktopWorkbench() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopWorkbenchPanel

getDesktopWorkbench() - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopInvalidProjectDependenciesInfoDialog

getDesktopWorkbench() - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderRun

getDesktopWorkbench() - Method in class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunNextWindow

getDesktopWorkbench() - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsButton

getDesktopWorkbench() - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopCompactRunnableQueueButton

getDesktopWorkbench() - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

getDesktopWorkbench() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentWorkbenchPanel

getDesktopWorkbench() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopUserFriendlyErrorUI

getDesktopWorkbench() - Method in class org.hkijena.jipipe.desktop.commons.components.parameters.JIPipeDesktopDynamicParameterEditorDialog

getDesktopWorkbench() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

getDesktopWorkbench() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

getDesktopWorkbench() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

getDesktopWorkbench() - Method in class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplatePopupMenu

getDesktopWorkbench() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI.ExternalEditor

getDesktopWorkbench() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableEditorWindow

getDespeckleIterations() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

getDetails() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry

getDevice() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings

getDialog() - Method in class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunExecuteUI

getDialog() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddAlgorithmSlotPanel

getDialog() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddParameterDialog

getDialog() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopEditAlgorithmSlotPanel

getDialogDescription() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstaller

The description of the installation dialog

getDialogHeading() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstaller

The heading of the installation dialog

getDialogType() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

getDiameter() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

getDiameter() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

getDiameter() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

getDiameter() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

getDiameter() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

getDiameter() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

getDiameter() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

getDiameter() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

getDiameter() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

getDiameter() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

getDiameter() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

getDiameter() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

getDiameter() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

getDiameter() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

getDiameter() - Method in class org.hkijena.jipipe.plugins.opencv.nodes.filters.BilateralFilterAlgorithm

getDiameterAnnotation() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

getDiameterAnnotation() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

getDiameterAnnotation() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

getDiameterAnnotation() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

getDiameterAnnotation() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

getDiameterAnnotation() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

getDiameterAnnotation() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

getDiamThreshold() - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationThresholdSettings

getDiceCoefficientAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm

getDifference() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.DifferenceSpotSegmentation3DAlgorithm

getDilationErodeSteps() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm

getDilationIterations() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

getDimension() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm

getDimensionalityOf(Class<? extends ImagePlusData>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

Gets the dimensionality of this

getDimensionCOperation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

getDimensionOrder() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEExporterSettings

getDimensionTOperation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

getDimensionZOperation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

getDirectories() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectDirectories

getDirectories() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

getDirectoriesAsInstance() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectDirectories

getDirectory() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextTableModel

getDirectory() - Method in class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironment

getDirectoryKey() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPathEditorComponent

getDirectoryMap() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Gets a map of user-defined directories

getDirectoryMap(Path) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectDirectories

Gets a map of user-defined directories

getDirectPredecessorNodes(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns DIRECT predecessor algorithms of an algorithm

getDisableStoreToCacheNodes() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

Allows to set a list of nodes where storing to cache is disabled

getDisableStoreToDiskNodes() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

Allows to exclude specific nodes from saving any outputs to the disk

getDisconnectHighlight() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getDismissedEventEmitter() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox

getDisplayedAlgorithms() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopMultiAlgorithmCacheBrowserUI

getDisplayedMax() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.DisplayRange

getDisplayedMin() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.DisplayRange

getDisplayedParameters() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

getDisplayName() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot

Returns a name that includes the algorithm name and the slot name.

getDisplayName() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

getDisplayName() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns a name that provides human-readable information about the name and compartment

getDisplayName() - Method in class org.hkijena.jipipe.api.run.JIPipeProjectRunSet

getDisplayName() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow

getDisplayName() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

getDisplayName(JIPipeDesktopProjectWorkbench, JIPipeDataSlot, JIPipeDataTableRowInfo, JIPipeDataAnnotationInfo) - Static method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotPreview

Returns a name that identifies this row

getDisplayName() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotRowUI

Returns a name that identifies this row

getDisplayName() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImagePlusResultImportRun

getDisplayName() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.OMEImageResultImportRun

getDisplayName() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

getDisplayOperation() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation

getDisplayOperations() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopDataTableRowDisplayUtil

getDistanceExpression() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm

getDistanceMeasure() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm.ClusteringSettings

getDistanceMeasure() - Method in enum org.hkijena.jipipe.plugins.tables.nodes.statistics.DistanceMeasures

getDistanceMeasure() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm.ClusteringSettings

getDistanceMeasure() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm.ClusteringSettings

getDistanceMetadataKey() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FindLinearFilamentVertexOrderAlgorithm

getDivergenceWeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

getDockLayoutSettings() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

getDockPanel() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow

getDockPanel() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

getDockPanel() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorRunManager

getDockPanel() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectOverviewUI

getDockPanel() - Method in class org.hkijena.jipipe.desktop.app.settings.project.JIPipeDesktopProjectOverviewRunManager

getDockStateTemplates() - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmSettingsPanelIOEditor

getDockStateTemplates() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

getDockStateTemplates() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.JIPipeDesktopCompartmentsGraphEditorUI

getDockStateTemplates() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.JIPipeDesktopPipelineGraphEditorUI

getDocument() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.ContextHelpEvent

getDocument() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

getDocument() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopMarkdownReader

getDocumentation() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterCollectionContextAction

getDocumentation() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionContextAction

Documentation of this action

getDocumentation() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

getDocumentation() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterCollectionContextAction

getDocumentationDescription(SetJIPipeDocumentation) - Static method in class org.hkijena.jipipe.utils.DocumentationUtils

Returns the documentation description string if available.

getDocumentationDescription(AddJIPipeDocumentationDescription) - Static method in class org.hkijena.jipipe.utils.DocumentationUtils

Returns the documentation description string if available.

getDocumentationDescription(SetJIPipeDocumentation, Class<?>) - Static method in class org.hkijena.jipipe.utils.DocumentationUtils

Returns the documentation description string if available.

getDocumentationDescription(Class<?>) - Static method in class org.hkijena.jipipe.utils.DocumentationUtils

Returns the documentation description string if available.

getDocumentationPanel() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopDocumentedComponent

getDocumentationTabPane() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

getDocumentTab() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.DocumentTabComponent

getDocumentTabPane() - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

getDocumentTabPane() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopDummyWorkbench

getDocumentTabPane() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

getDocumentTabPane() - Method in interface org.hkijena.jipipe.desktop.app.JIPipeDesktopWorkbench

getDocumentTabPane() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.DocumentTab

getDocumentTabPane() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.DocumentTabComponent

getDocumentTabPane() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.TabRenamedEvent

getDoubleByDialog(Component, String, String, double, double, double) - Static method in class org.hkijena.jipipe.utils.UIUtils

Gets an integer by dialog

getDoubleValue() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.StringOrDouble

getDownloaderQueue() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow

getDragAndDropBehavior() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getDrawer() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.overlay.RenderOverlay3DAlgorithm

getDrawer() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DToRGBAlgorithm

getDrawFilledOutlineMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

getDrawFilledOutlineMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

getDrawFilledOutlineMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

getDrawFilledOutlineMode() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

getDrawnArea(Point, Point, boolean, boolean) - Static method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.RectangleMaskDrawer2DTool

getDrawnFeature() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer.LabelSettings

getDrawnLabel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

getDrawnLabel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

getDrawnLabel() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

getDrawOutlineMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

getDrawOutlineMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

getDrawOutlineMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

getDrawOutlineMode() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

getDtype(Class<T>) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.Hdf5Utils

getDuplicate() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

getDuplicate() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRef

getDuplicateImage() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

Returns a duplicate of the contained image

getDuplicateImage() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.OMEImageData

Returns a duplicate of the contained image

getDynamic() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMaxima2DAlgorithm

getDynamic() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMaxima3DAlgorithm

getDynamic() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMinima2DAlgorithm

getDynamic() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMinima3DAlgorithm

getEdge() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphConnection

getEdge() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

getEdgeFeature(DefaultWeightedEdge, String, double) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

Gets a feature from an edge.

getEdgeFeatureRange(String) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

Returns the range of values for a feature.

getEdgeLength(FilamentEdge, boolean, String) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

Gets the length of an edge in the specified unit

getEdgeMask() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesExpressionAlgorithm

getEdgeMask() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesManuallyAlgorithm

getEdgesBetween(JIPipeGraphNode, JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Gets all edges between two algorithm nodes

getEditor(JIPipeDesktopWorkbench) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.BooleanFormData

getEditor(JIPipeDesktopWorkbench) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.DoubleFormData

getEditor(JIPipeDesktopWorkbench) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.EnumFormData

getEditor(JIPipeDesktopWorkbench) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.FormData

Gets a component that acts as the editor for the form data.

getEditor(JIPipeDesktopWorkbench) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.GroupHeaderFormData

getEditor(JIPipeDesktopWorkbench) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.IntegerFormData

getEditor(JIPipeDesktopWorkbench) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

getEditor(JIPipeDesktopWorkbench) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.StringFormData

getEditor(JIPipeDesktopWorkbench) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.MaskDrawerFormData

getEditor(JIPipeDesktopWorkbench) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.ROIDrawerFormData

getEditPanel() - Method in class org.hkijena.jipipe.plugins.expressions.ui.JIPipeExpressionDesktopParameterEditorUI

getEigenvalueSelection() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

getEigenvalueSelection2D() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.Hessian2DAlgorithm

Deprecated.

getElement() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateStructureElement2DAlgorithm

getElement() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateStructureElement3DAlgorithm

getElement() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm

getElement() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm

getEmail() - Method in class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment

getEmitter() - Method in class org.hkijena.jipipe.api.events.AbstractJIPipeEvent

getEmitter() - Method in interface org.hkijena.jipipe.api.events.JIPipeEvent

The first emitter that published the event Will not change if an event is re-emitted

getEmitter() - Method in class org.hkijena.jipipe.utils.ui.events.MouseClickedEvent

getEmitter() - Method in class org.hkijena.jipipe.utils.ui.events.MouseDraggedEvent

getEmitter() - Method in class org.hkijena.jipipe.utils.ui.events.MouseEnteredEvent

getEmitter() - Method in class org.hkijena.jipipe.utils.ui.events.MouseExitedEvent

getEmitter() - Method in class org.hkijena.jipipe.utils.ui.events.MouseMovedEvent

getEmitter() - Method in class org.hkijena.jipipe.utils.ui.events.MousePressedEvent

getEmitter() - Method in class org.hkijena.jipipe.utils.ui.events.MouseReleasedEvent

getEmptyClusterStrategy() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm.ClusteringSettings

getEnd() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry

getEndBoundary() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm.HistogramBin

getEndpoints() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph

getEngineMode() - Method in class org.hkijena.jipipe.plugins.ijocr.nodes.TesseractOCRAlgorithm

getEnhancementParameters() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

getEnhancementParameters() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

getEnhancementParameters() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

getEnhancementParameters() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

getEnhancementParameters() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

getEnhancementParameters() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

getEnqueuedEventEmitter() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

getEnsureMinNumberOfRows() - Method in class org.hkijena.jipipe.plugins.tables.nodes.GenerateColumnAlgorithm

getEntries() - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase

getEntries() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

getEntries() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm

getEntries() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm

getEntries() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm

getEntries() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo

getEntries() - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.AnnotateWithJsonDataAlgorithm

getEntries() - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.ExtractJsonDataAsTableAlgorithm

getEntries() - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.AnnotateWithTextDataAlgorithm

getEntries() - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.TextDataToTableAlgorithm

getEntries() - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.AnnotateWithXPathDataAlgorithm

getEntries() - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm

getEntries() - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2

getEntries() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.SortRowsByExpressionAlgorithm

getEntry() - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection.LogEntryAddedEvent

getEntryClass() - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

getEnumValues(Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

Gets all enum values via reflection

getEnvironment(JIPipeProject, OptionalIlastikEnvironment) - Static method in class org.hkijena.jipipe.plugins.ilastik.IlastikPlugin

getEnvironment() - Static method in class org.hkijena.jipipe.plugins.napari.NapariPlugin

getEnvironment(JIPipeProject, OptionalOMEROCredentialsEnvironment) - Static method in class org.hkijena.jipipe.plugins.omero.OMEROPlugin

getEnvironment(JIPipeProject, OptionalPythonEnvironment) - Static method in class org.hkijena.jipipe.plugins.omnipose.OmniposePlugin

getEnvironment(JIPipeProject, OptionalPythonEnvironment) - Static method in class org.hkijena.jipipe.plugins.python.CorePythonPlugin

getEnvironment(JIPipeProject, OptionalREnvironment) - Static method in class org.hkijena.jipipe.plugins.r.RPlugin

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Gathers all known external environments

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in interface org.hkijena.jipipe.api.settings.JIPipeProjectSettingsSheet

Gathers all known external environments.

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectDirectoriesSettingsSheetWrapper

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectMetadataSettingsSheetWrapper

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectParametersSettingsSheetWrapper

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectPermissionsSettingsSheetWrapper

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePluginProjectSettings

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.FilamentsPluginProjectSettings

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.ijocr.nodes.TesseractOCRAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.ijocr.settings.OCRPluginProjectSettings

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginProjectSettings

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImageJSampleAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesProjectSettings

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROPlateReferenceAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMERODatasetReferenceDataSource

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROImageReferenceDataSource

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROPlateReferenceDataSource

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROProjectReferenceDataSource

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROScreenReferenceDataSource

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROWellReferenceDataSource

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROImageAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROTableAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.manage.OMEROCreateDatasetAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListDatasetImagesAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListDatasetsAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListGroupsAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListPlatesAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListProjectsAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListScreensAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListWellImagesAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListWellsAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROImageToDatasetAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROTableAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginProjectSettings

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginProjectSettings

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.IteratingPythonScriptAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.MergingPythonScriptAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.PythonScriptAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.python.PythonPluginProjectSettings

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.r.algorithms.ImportRDatasetAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.r.algorithms.IteratingRScriptAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.r.algorithms.MergingRScriptAlgorithm

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.r.RPluginProjectSettings

getEnvironmentDependencies(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDataStorageProjectSettings

getEnvironmentName() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectCondaEnvPythonInstaller.Configuration

getEnvironmentVariables() - Method in class org.hkijena.jipipe.api.environments.JIPipeProcessArtifactEnvironment

getEnvironmentVariables() - Method in class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

getEnvironmentVariables() - Method in class org.hkijena.jipipe.plugins.python.PythonEnvironment

getEnvironmentVariables() - Method in class org.hkijena.jipipe.plugins.r.REnvironment

getEpsilon() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm

getEpsilon() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm.ClusteringSettings

getEquivalentNode(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns the algorithm that has the same UUID as the foreign algorithm in the foreign graph.

getEquivalentRows(Set<String>) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Returns the row indices grouped by the values of the provided columns

getEquivalentSlot(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns the slot with the same name within the algorithm with the same ID.

getErosionIterations() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

getErroneousDataTypes() - Method in class org.hkijena.jipipe.JIPipeRegistryIssues

getErroneousNodes() - Method in class org.hkijena.jipipe.JIPipeRegistryIssues

getErroneousParameterTypes() - Method in class org.hkijena.jipipe.JIPipeRegistryIssues

getErroneousPlugins() - Method in class org.hkijena.jipipe.JIPipeRegistryIssues

getError() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

getErrorExplanation() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.CrasherAlgorithm

getErrorSolution() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.CrasherAlgorithm

getErrorStream() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree

getErrorTitle() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.CrasherAlgorithm

getErrorToolbar() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopValidityReportUI

getEvaluator() - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

Returns the evaluator instance that should evaluate this expression type

getEvaluator() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameter

getEvaluatorInstance() - Static method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameter

getEvolutionParameters() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

getExample() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

getException() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnable.InterruptedEvent

getExecutablePath() - Method in class org.hkijena.jipipe.api.environments.JIPipeProcessArtifactEnvironment

getExecutablePath() - Method in class org.hkijena.jipipe.plugins.python.PythonEnvironment

getExecutablePathLinux() - Method in class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

getExecutablePathOSX() - Method in class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

getExecutablePathWindows() - Method in class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

getExecutorService() - Method in class org.hkijena.jipipe.api.JIPipeFixedThreadPool

Returns the ExecutorService or null.

getExpectedNumberOfObjects() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

getExpectedStep() - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm

getExplanation() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry

getExportDelay() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.MacroWrapperAlgorithm

getExportDummyCanvas() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

A dummy ImageCanvas that is needed by some visualization algorithms for magnification Its magnification should be permanently 1.0

getExportedImageJDataType() - Method in class org.hkijena.jipipe.api.compat.DataTableImageJDataExporter

getExportedImageJDataType() - Method in class org.hkijena.jipipe.api.compat.EmptyImageJDataExporter

getExportedImageJDataType() - Method in interface org.hkijena.jipipe.api.compat.ImageJDataExporter

getExportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.compat.LegacyCellposeModelImageJExporter

getExportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.compat.LegacyCellposeSizeModelImageJExporter

getExportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.clij2.compat.CLIIJ2DataToImageWindowImageJExporter

getExportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.filesystem.compat.PathDataToTableImageJExporter

getExportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.ij3d.compat.ROI3DImageJExporter

getExportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.compat.IJ2DataToImageWindowImageJExporter

getExportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.ImagePlusDataToImageWindowImageJExporter

getExportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.OMEImageToImageWindowImageJExporter

getExportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.RoiManagerImageJExporter

getExportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.tables.compat.ResultsTableDataImageJExporter

getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.api.compat.DataTableImageJDataExporter

getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.api.compat.EmptyImageJDataExporter

getExportedJIPipeDataType() - Method in interface org.hkijena.jipipe.api.compat.ImageJDataExporter

getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.compat.LegacyCellposeModelImageJExporter

getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.compat.LegacyCellposeSizeModelImageJExporter

getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.clij2.compat.CLIIJ2DataToImageWindowImageJExporter

getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.filesystem.compat.PathDataToTableImageJExporter

getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.ij3d.compat.ROI3DImageJExporter

getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.compat.IJ2DataToImageWindowImageJExporter

getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.ImagePlusDataToImageWindowImageJExporter

getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.OMEImageToImageWindowImageJExporter

getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.RoiManagerImageJExporter

getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.tables.compat.ResultsTableDataImageJExporter

getExportedMagnification() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

Returns the magnification that export/render methods should apply

getExportedParameters() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

getExportedParameters() - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

getExportedParameters() - Method in class org.hkijena.jipipe.api.grouping.JsonAlgorithm

getExportedParameters() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

getExportedParameters() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectInfoParameters

getExportedPreviewSizes() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

getExportedSlotNames() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

getExporter() - Method in class org.hkijena.jipipe.api.compat.ImageJDataExporterUI

getExporter() - Method in class org.hkijena.jipipe.api.compat.ImageJDataExportOperation

getExporter() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToFilesByMetadataExporterRun.Settings

getExporter() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportData

getExporter() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter

getExporter() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.ExportROI3DAlgorithm

Deprecated.

getExporter() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

getExporter() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm

getExporter() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm

Deprecated.

getExporter() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm

Deprecated.

getExporter() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm

Deprecated.

getExporter() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsExporterAlgorithm

Deprecated.

getExporter() - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm

Deprecated.

getExporterById(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry

getExporterId() - Method in class org.hkijena.jipipe.api.compat.ImageJDataExportOperation

getExporterSettings() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.OMEImageFromImagePlus

getExporterSettings() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsExporter2Algorithm

getExporterSettings() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsExporterAlgorithm

Deprecated.

getExporterSettings() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.SetBioFormatsExporterSettings

getExporterSettings() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.OMEImageData

getExporterType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.RunImageJExporterAlgorithm

getExportHeight() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

getExportParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.RunImageJExporterAlgorithm

getExportWidth() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

getExpression() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopExpressionCalculatorUI.ResultItem

getExpression() - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

getExpression() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ModifyPath

getExpression() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ModifyPathWithExpression

getExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.ColorToGreyscaleExpression2D

getExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression2DAlgorithm

getExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression3DAlgorithm

getExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyColorMathExpression2DExpression

getExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.FastImageArithmeticsAlgorithm

getExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageCalculator2DExpression

getExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression

getExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm

getExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm

getExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ColorThresholdExpression2D

getExpression() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRange

getExpression() - Method in class org.hkijena.jipipe.plugins.tables.nodes.ModifyTableColumnNamesAlgorithm

getExpression() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.RunExpressionAlgorithm

getExpression() - Method in class org.hkijena.jipipe.utils.ui.ExpressionTesterUI

getExpressionC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

getExpressionList() - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm

Deprecated.

getExpressionRegistry() - Method in class org.hkijena.jipipe.JIPipe

getExpressionRegistry() - Method in interface org.hkijena.jipipe.JIPipeService

getExpressionT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

getExpressionZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

getExtension() - Method in class org.hkijena.jipipe.api.validation.contexts.JavaExtensionValidationReportContext

getExtension() - Method in class org.hkijena.jipipe.JIPipeService.ExtensionContentAddedEvent

getExtension() - Method in class org.hkijena.jipipe.JIPipeService.ExtensionContentRemovedEvent

getExtension() - Method in class org.hkijena.jipipe.JIPipeService.ExtensionDiscoveredEvent

getExtension() - Method in class org.hkijena.jipipe.JIPipeService.ExtensionRegisteredEvent

getExtension() - Method in class org.hkijena.jipipe.plugins.clij2.parameters.OpenCLKernelScript

getExtension() - Method in enum org.hkijena.jipipe.plugins.imp.datatypes.ImpImageOutputFormat

getExtension() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptParameter

Returns the default extension for this script

getExtension() - Method in class org.hkijena.jipipe.plugins.parameters.library.scripts.ImageJMacro

getExtension() - Method in class org.hkijena.jipipe.plugins.parameters.library.scripts.PythonScript

getExtension() - Method in class org.hkijena.jipipe.plugins.r.parameters.RScriptParameter

getExtensionBuilderLogo400() - Static method in class org.hkijena.jipipe.utils.UIUtils

getExtensionContentAddedEventEmitter() - Method in class org.hkijena.jipipe.JIPipe

getExtensionContentAddedEventEmitter() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

getExtensionContentAddedEventEmitter() - Method in interface org.hkijena.jipipe.JIPipeService

getExtensionContentRemovedEventEmitter() - Method in class org.hkijena.jipipe.JIPipe

getExtensionContentRemovedEventEmitter() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

getExtensionContentRemovedEventEmitter() - Method in interface org.hkijena.jipipe.JIPipeService

getExtensionDiscoveredEventEmitter() - Method in class org.hkijena.jipipe.JIPipe

getExtensionDiscoveredEventEmitter() - Method in interface org.hkijena.jipipe.JIPipeService

getExtensionFilters() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPathEditorComponent

getExtensionId() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry.ScheduledActivatePluginEvent

getExtensionId() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry.ScheduledDeactivatePluginEvent

getExtensionRegisteredEventEmitter() - Method in class org.hkijena.jipipe.JIPipe

getExtensionRegisteredEventEmitter() - Method in interface org.hkijena.jipipe.JIPipeService

getExtensions() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextPathTypeMetadata

getExtensions() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

getExtensions() - Method in enum org.hkijena.jipipe.plugins.imp.datatypes.ImpImageOutputFormat

getExternalDownloaderProcess() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDownloadsApplicationSettings

getExternalEnvironmentRegistry() - Method in class org.hkijena.jipipe.JIPipe

getExternalEnvironmentRegistry() - Method in interface org.hkijena.jipipe.JIPipeService

getExternalFactor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

getExternalScriptFile() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptParameter

getExtractedParameters() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.AnnotationsToParametersAlgorithm

getExtraRuntimePartitions() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration

getFactorX() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.SmoothFilamentsAlgorithm

getFactorY() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.SmoothFilamentsAlgorithm

getFactoryData() - Method in class org.hkijena.jipipe.plugins.imagej2.algorithms.CreateIJ2OutOfBoundsFactoryAlgorithm

getFactoryType() - Method in class org.hkijena.jipipe.plugins.imagej2.algorithms.CreateIJ2OutOfBoundsFactoryAlgorithm

getFactorZ() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.SmoothFilamentsAlgorithm

getFadeTrackRange() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

getFailedExtensions() - Method in class org.hkijena.jipipe.JIPipe

getFallbackTemplateId() - Static method in class org.hkijena.jipipe.api.project.JIPipeProjectTemplate

getFalseNegativeErrorAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm

getFalsePositiveErrorAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm

getFalseString() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.BooleanFormData

getFeature() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeatureFilterParameter

getFeature() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeaturePenaltyParameter

getFeature() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeatureFilterParameter

getFeatureDescriptorOrientationBins() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SIFTParameters

getFeatureDescriptorSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SIFTParameters

getFeatureSettings() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingLabels2DAlgorithm

getFeatureSettings() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingLabels2DAlgorithm2

getFeatureSettings() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingMask2DAlgorithm

getFeatureSettings() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingMask2DAlgorithm2

getFeatureSettings() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingROI2DAlgorithm

getFeatureSettings() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingROI3DAlgorithm

getFieldClass() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess

getFieldClass() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterTypeInfo

getFieldClass() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.UserParameterDefinition

getFieldClass() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess

getFieldClass() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess

getFieldClass() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

getFieldClass() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess

Returns the parameter data type

getFieldClass() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterTypeInfo

getFieldClass() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

getFieldClass() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterKeyPickerUI.ParameterEntry

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameterItemParameterAccess

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.EnumParameterTypeInfo

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterInputAccess

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterOutputAccess

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterParameterAccess

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterKeyAccess

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterValueAccess

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanParameterTypeInfo

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanPrimitiveParameterTypeInfo

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ByteParameterTypeInfo

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BytePrimitiveParameterTypeInfo

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.DoubleParameterTypeInfo

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.DoublePrimitiveParameterTypeInfo

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.FloatParameterTypeInfo

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.FloatPrimitiveParameterTypeInfo

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.IntParameterTypeInfo

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.IntPrimitiveParameterTypeInfo

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.LongParameterTypeInfo

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.LongPrimitiveParameterTypeInfo

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ShortParameterTypeInfo

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ShortPrimitiveParameterTypeInfo

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ParameterColumn

getFieldClass() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableCellAccess

getFieldClassInfoId() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

getFieldClassInfoId() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ParameterColumn

getFieldValue(String, Object) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

Gets the value of a field

getFieldValue(String, Object, Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

Gets the value of a field

getFieldValue(Field, Object) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

Gets the value of a field

getFieldValue(Field, Object, Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

Gets the value of a field

getFilamentDrawer() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.ImageViewerUIFilamentDisplayApplicationSettings

getFilamentsDrawer() - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

getFilamentsDrawer() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRGBAlgorithm

getFilamentsListControl() - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

getFilamentsManagerPlugin2D() - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D.SelectionContextPanel

getFileChooserComponent() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

Gets the underlying file chooser component

getFileChooserType() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

getFileFilter() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

getFileFormat() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImage2Algorithm

getFileFormat() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

getFileFormat() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm

getFileFormat() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm

Deprecated.

getFileFormat() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm2

getFileFormat() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportResultsTableAlgorithm

getFileFormat() - Method in class org.hkijena.jipipe.plugins.imp.nodes.ExportImpImageAlgorithm

getFileName() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileDataSource

getFileName() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImageJSampleAlgorithm.Sample

getFileNameAnnotation() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotateWithPathProperties

getFileNameAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROTableAlgorithm

getFileNameGenerator() - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter

getFileNameGenerator() - Method in class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROImageToDatasetAlgorithm

getFileNameGenerator() - Method in class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROTableAlgorithm

getFilePath() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ConvertToExportedPath

getFilePath() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter2

getFilePath() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.ExportROI3DAlgorithm2

getFilePath() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.ExportIlastikHDF5ImageAlgorithm

getFilePath() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImage2Algorithm

getFilePath() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm2

getFilePath() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm2

getFilePath() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2

getFilePath() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsExporter2Algorithm

getFilePath() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm

getFilePath() - Method in class org.hkijena.jipipe.plugins.imp.nodes.ExportImpImageAlgorithm

getFilePath() - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionRegistrationTask

getFilePath() - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm2

getFiles() - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderRepository

getFiles() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileListDataSource

getFiles() - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderRepository

getFileSystemPath() - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeDataStorage

Returns a path on the file system where data can be read/written This path is always ensured to exist.

getFileSystemPath() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage

getFileSystemPath() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage

getFileSystemPath() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage

getFileSystemPath() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPWriteDataStorage

getFill() - Method in class org.hkijena.jipipe.utils.ui.RoundedLineBorder

getFillBox() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Returns the flag that controls whether or not the box is filled.

getFillColor() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory

getFillColor() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory

getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory

getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory

getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory

getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory

getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory

getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory

getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory

getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory

getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory

getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory

getFillColor() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewCompartmentNodeDatabaseEntry

getFillColor() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

getFillColor() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

getFillColor() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

getFillColor() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

getFillColor() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

getFillColor() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry

getFillColor() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory

The fill color for algorithm nodes

getFillColor() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

getFillColor() - Method in interface org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopColorIcon

getFillColor() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.OverlayJIPipeDesktopColorIcon

getFillColor() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.SolidColorIcon

getFillColor() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.TextBoxAnnotationGraphNode.ShapeParameters

getFillColor() - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

getFillColor() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

getFillColor() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

getFillColor() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

getFillColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsNodeTypeCategory

getFillColor() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode

getFillColor() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertTracksToRoiNode

getFillColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualLocationROIProperties

getFillColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualROIProperties

getFillColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

getFillColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

getFillColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

getFillColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

getFillColor() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

getFillColorAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

getFillColorFor(JIPipeNodeInfo) - Static method in class org.hkijena.jipipe.utils.UIUtils

Returns a fill color for JIPipeNodeInfo

getFillGap() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

getFillMeasurement() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ColorRoi3DByStatisticsAlgorithm

getFillMeasurement() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm

getFilter() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.FilterByAnnotation

getFilter() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.FilterByAnnotationIfElse

getFilter() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm

getFilter() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.FilterFilamentEdgesByProperties

getFilter() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.FilterFilamentsByProperties

getFilter() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.FilterFilamentVerticesByProperties

getFilter() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm.NewEdgesSettings

getFilter() - Method in class org.hkijena.jipipe.plugins.ijfilaments.parameters.EdgeMaskParameter

getFilter() - Method in class org.hkijena.jipipe.plugins.ijfilaments.parameters.VertexMaskParameter

getFilter() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SpotFilterNode

getFilter() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.TrackFilterNode

getFilter() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByThicknessAlgorithm

getFilter() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm

getFilter() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromGlobalParametersAlgorithm

getFilter() - Method in class org.hkijena.jipipe.plugins.omero.parameters.AnnotationsToOMEROKeyValuePairExporter

getFilter() - Method in class org.hkijena.jipipe.plugins.omero.parameters.OMEROKeyValuePairToAnnotationImporter

getFilter() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnsToAnnotationsAlgorithm

getFilter() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm

getFilter() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm

getFilteredAndSortedItems() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopPickerDialog

getFilteredItems() - Method in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDataTypeCompendiumUI

getFilteredItems() - Method in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopAlgorithmCompendiumUI

getFilteredItems() - Method in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopCompendiumUI

Returns all items that should be available

getFilterExpression() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.RemoveROI3DMetadataAlgorithm

getFilterExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

getFilterExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata.RemoveImageMetadataAlgorithm

getFilterExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.RemoveROIMetadataAlgorithm

getFilterFunction() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

getFilterFunction() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

getFilterIndex() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersAdaptiveAlgorithm

getFilterIndex() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersAlgorithm

getFilterIndex() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersCloseAlgorithm

getFilterIndex() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersLocalMaxAlgorithm

getFilterIndex() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersMaxAlgorithm

getFilterIndex() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersMeanAlgorithm

getFilterIndex() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersMedianAlgorithm

getFilterIndex() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersMinAlgorithm

getFilterIndex() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersOpenAlgorithm

getFilterIndex() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersSobelAlgorithm

getFilterIndex() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersTopHatAlgorithm

getFilterIndex() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersVarianceAlgorithm

getFilteringParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

getFilterLargeDiameter() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter

getFilters() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.FilterPaths

getFilters() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListFiles

getFilters() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListSubfolders

getFilters() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm

getFilters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm

getFilters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm

getFilters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm

getFilters() - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListDatasetImagesAlgorithm

getFilters() - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListDatasetsAlgorithm

getFilters() - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListGroupsAlgorithm

getFilters() - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListPlatesAlgorithm

getFilters() - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListProjectsAlgorithm

getFilters() - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListScreensAlgorithm

getFilters() - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListWellImagesAlgorithm

getFilters() - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListWellsAlgorithm

getFilters() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnToNumericAlgorithm

getFilters() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnToStringAlgorithm

getFilters() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RemoveColumnAlgorithm

getFilters() - Method in class org.hkijena.jipipe.plugins.tables.nodes.filter.FilterTableRowsAlgorithm

getFilters() - Method in class org.hkijena.jipipe.plugins.tables.nodes.filter.FilterTablesAlgorithm

getFilterSmallDiameter() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter

getFinalOutputPath() - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderPackage

getFinishedEventEmitter() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

getFinishedEventEmitter() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableWorker

getFinishedMessage() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstaller

The message shown after the operation is finished

getFirst() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceCube

getFirstAccess() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess

getFirstColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm

getFirstComponent() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Action

getFirstIndex() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

getFirstInputSlot() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

getFirstInputSlot() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the first input slot according to the slot order.

GetFirstItemFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

GetFirstItemFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.GetFirstItemFunction

getFirstName() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

getFirstOutputSlot() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the first output slot according to the slot order.

getFirstPredecessor(Graph<V, E>, V) - Static method in class org.hkijena.jipipe.utils.GraphUtils

GetFirstSummarizingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.integrating

Implements calculating the sum

GetFirstSummarizingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.integrating.GetFirstSummarizingColumnOperation

getFitMode() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

getFixedName() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectTemplate

Returns the metadata name if the template is resource-based or registered via the Java API.

getFlags() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

getFlipMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformFlip2DAlgorithm

getFloatingPanelMarginBottom() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

getFloatingPanelMarginLeftRight() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

getFloatingPanelMarginTop() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

getFlow3DSmoothing() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTweaksSettings

getFlowThreshold() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationThresholdSettings_Old

Deprecated.

getFlowThreshold() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationThresholdSettings

getFlowThreshold() - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationThresholdSettings

getFolderPath() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderDataSource

getFolderPaths() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderListDataSource

getFollowedDimension() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Video2DExporterRun

getFontFamily() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters

getFontFamily() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings

getFontFamily() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

getFontFamily() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings

getFontFamily() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

getFontFamily() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

getFontSize() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters

getFontSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings

getFontSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

getFontSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

getFontSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

getFontSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings

getFontSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

getFontSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

getFontStyle() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters

getFontStyle() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings

getFontStyle() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

getFontStyle() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings

getFontStyle() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

getFontStyle() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

getForcedLineThickness() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

getForcedLineThickness() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm

getForcedLineThickness() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm

getForcedLineThickness() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm

getForcedLineThickness() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm

getForcedVertexRadius() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

getForcedVertexRadius() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm

getForcedVertexRadius() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm

getForcedVertexRadius() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm

getForcedVertexRadius() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm

getForceNumColumns() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

getForceNumRows() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

getForeground() - Method in enum org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMessagePanel.MessageType

getForegroundColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

getForegroundColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

getFormatName() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Stack2DExporterRun

getFormatVersion() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

Returns the format version for storage in the JSON file.

getFormData() - Method in class org.hkijena.jipipe.plugins.forms.algorithms.SimpleFormGeneratorAlgorithm

getFormPanel() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.ContextHelpEvent

getFrame() - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

getFrame() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.NonSpatialPoint3d

getFrameLocation() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

getFrameLocation() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

getFrameLocation() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

getFramePosition() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

The overall frame position of the ROIs.

getFramesSizeAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

getFramesSizeAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

getFullId() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

Returns a string GroupId.ArtifactId:Version-Classifier

getFullName(JIPipeRuntimePartition) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration

getFunction() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterCollectionContextAction

getFunction() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ExpressionFunctionEntry

getFunction() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

getFunction() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateFromMathExpression2D

getFunction() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

getFunctionName() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.FunctionNode

getFunctionParameter() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterInputAccess

getFunctionParameter() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterOutputAccess

getFunctionParameter() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterParameterAccess

getFunctions() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractAndReplaceAnnotation

getFuzziness() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm

getGamma() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

getGamma() - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaborKernelGenerator

getGateway() - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROGateway

getGaussianAlgorithm() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.IlluminationCorrection2DAlgorithm

getGaussianKernelRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm

getGaussianKernelWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm

getGaussianSigma() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm

getGaussianStd() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXInitializationParameters

getGaussPC() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.GaussianFitSpotSegmentation3DAlgorithm

getGaussSigma() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

getGcEventEmitter() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph

getGeneratedAnnotation() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithDataString

getGeneratedAnnotation() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithSourceSlot

getGeneratedAnnotation() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.GenerateRandomUniqueAnnotation

getGeneratedAnnotation() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.GenerateUniqueAnnotation

getGeneratedAnnotation() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimpleFileAnnotationGenerator

getGeneratedAnnotation() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimpleFolderAnnotationGenerator

getGeneratedAnnotation() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimplePathAnnotationGenerator

getGeneratedAnnotation() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.ExplodeRoi3DListAlgorithm

getGeneratedAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.ExplodeRoiAlgorithm

getGeneratedAnnotation() - Method in class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableIntoColumnsAlgorithm

getGeneratedAnnotationName() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SimplifyAnnotationsAlgorithm

getGeneratedAnnotations() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByProjectPaths

getGeneratedAnnotations() - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateDataWithTableValues

getGeneratedColumns() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator

getGeneratedImageType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageAlgorithm

getGeneratedImageType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

getGeneratedImageType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImagePlusAlgorithm

getGeneratedRows() - Method in class org.hkijena.jipipe.plugins.tables.nodes.GenerateTableFromExpressionAlgorithm

getGeneratedType() - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnGeneratorParameter

getGeneratedValues() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.EnumParameterGenerator

getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.api.looping.LoopStartNode

Deprecated.

getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm

getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm

getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm

getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm

getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm

getGenerationSettingsInterface() - Method in interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationStepAlgorithm

Returns the batch generation settings as interface

getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.plugins.forms.algorithms.IteratingFormProcessorAlgorithm

getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.plugins.forms.algorithms.MergingFormProcessorAlgorithm

getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.plugins.forms.algorithms.SimpleIteratingFormProcessorAlgorithm

getGeneratorsFor(Class<?>) - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry

Returns all generators for the parameter class

getGeneratorType() - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnGeneratorParameter

getGeometry() - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.CreateLineMeshAlgorithm

getGeometry() - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.CreateSphereMeshAlgorithm

getGlobalParameters() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

getGlobalParameters() - Method in class org.hkijena.jipipe.desktop.app.settings.project.JIPipeDesktopMergedProjectSettings

getGlobalTemplates() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

getGpuDevice() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2GPUSettings

getGpuSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

getGpuSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

getGpuSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

getGpuSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

getGpuSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

getGpuSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

getGpuSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

getGpuSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

getGpuSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

getGpuSettings() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

getGpuSettings() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

getGpuSettings() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

getGpuSettings() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

getGPUVersion(String) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

getGradient() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJStructureTensorParameters

getGradientRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

getGradientStops() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.LUTData

getGraph() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

getGraph() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection

Returns the reference to the graph.

getGraph() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal

getGraph() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal.Snapshot

getGraph() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal.Snapshot

getGraph() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

Gets the node type stored inside the data.

getGraph() - Method in class org.hkijena.jipipe.api.looping.LoopGroup

getGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

getGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.GraphChangedEvent

getGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeAddedEvent

getGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeConnectedEvent

getGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeDisconnectedEvent

getGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeRemovedEvent

getGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphConnection

getGraph() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

getGraph() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun

getGraph() - Method in class org.hkijena.jipipe.desktop.app.bookmarks.JIPipeDesktopBookmarkListPanel

getGraph() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

getGraph() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getGraphCanvas() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool

getGraphCanvasUI() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.GraphCanvasUpdatedEvent

getGraphCanvasUI() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

getGraphCanvasUpdatedEventEmitter() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getGraphChangedEventEmitter() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

getGraphEditor() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

getGraphEditor() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool

getGraphEditor() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

getGraphEditor() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool

getGraphEditor() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

getGraphEditor() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

getGraphEditor() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

getGraphEditorCursor() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getGraphEditorToolRegistry() - Method in class org.hkijena.jipipe.JIPipe

getGraphEditorToolRegistry() - Method in interface org.hkijena.jipipe.JIPipeService

getGraphEditorUI() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopGraphEditorToolBarButtonExtension

getGraphEditorUI() - Method in class org.hkijena.jipipe.desktop.app.bookmarks.JIPipeDesktopBookmarkListPanel

getGraphEditorUI() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getGraphEditorUI() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.properties.JIPipeDesktopGraphEditorErrorPanel

getGraphNode() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

getGraphNode() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopAlgorithmCacheBrowserUI

getGraphNodes() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns the set of node instances.

getGraphNodeUUIDs() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns the set of node UUIDs.

getGraphPostprocessing() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

getGraphRun() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNodeRunContext

Gets the JIPipeGraphRun that is currently executing

getGraphUISettings() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

getGreen() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

getGreenRedThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

getGreenThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

getGridColor() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

getGridHeight() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode

getGridHeight() - Method in enum org.hkijena.jipipe.desktop.app.grapheditor.JIPipeGraphViewMode

getGridSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm

getGridWidth() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode

getGridWidth() - Method in enum org.hkijena.jipipe.desktop.app.grapheditor.JIPipeGraphViewMode

getGroupedBySource() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Gets the parameters grouped by the source

getGroupHeaderPanels() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

getGroupId() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

getGroupId() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROGroupReferenceData

getGroupIds() - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROGroupReferenceDataSource

getGroupingDelta() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

getGroupingDistanceThreshold() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

getGroupInput() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

Gets the graphs' input node

getGroupInput() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

Gets the graphs's input node

getGroupName() - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.GroupSceneAlgorithm

getGroupOutput() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

Gets the graphs' output node

getGroupOutput() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

Gets the graphs's output node

getH() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.HoughLineSegments.HoughResult

getHarrisK() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

getHarrisL() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

gethBarWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

getHdf5Path() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.ExportIlastikHDF5ImageAlgorithm

getHdf5Path() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.ImportIlastikHDF5ImageAlgorithm

getHeaderPanelBackground() - Static method in class org.hkijena.jipipe.utils.UIUtils

getHeading() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification

getHeavyIntermediateAlgorithmOutputSlots() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Returns a list of all nodes that generate heavy data (LabelAsJIPipeHeavyData) and are intermediate (see getIntermediateAlgorithms()).

getHeight() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeEmptyThumbnailData

getHeight() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData

getHeight() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData

getHeight() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData

getHeight() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData

getHeight() - Method in interface org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailData

The height if hasSize() is true Otherwise, will return 0

getHeight() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGenerationRun

getHeight() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Action

getHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap

getHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateZeroImage

getHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateFromMathExpression2D

getHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

getHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegImage

Return the full-size image height.

getHeight() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

getHeight() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageDimensions

getHeight() - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

getHeight() - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

getHeight() - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaborKernelGenerator

getHeight() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

getHeightAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

getHeightAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

getHeightTolerance() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm

getHelpPanel() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

getHighlightColor() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

getHighlightedComponents() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.FormPanelContentPanel

getHighThreshold() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.HysteresisSegmentation3DAlgorithm

getHighThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm

getHistogramNameAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

getHistogramType() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

getHistoryChangedEventEmitter() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal

getHistoryChangedEventEmitter() - Method in class org.hkijena.jipipe.api.history.JIPipeDummyGraphHistoryJournal

getHistoryChangedEventEmitter() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

getHistoryChangedEventEmitter() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal

getHistoryJournal() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal.Snapshot

getHistoryJournal() - Method in class org.hkijena.jipipe.api.history.JIPipeHistoryJournal.HistoryChangedEvent

getHistoryJournal() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal.Snapshot

getHistoryJournal() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

getHistoryJournal() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

getHistoryJournal() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getHistoryJournal() - Method in class org.hkijena.jipipe.desktop.app.history.JIPipeDesktopHistoryJournalUI

getHistoryJournal() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddAlgorithmSlotPanel

getHistoryJournal() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopEditAlgorithmSlotPanel

gethLabel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

getHorizontalBarSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

getHorizontalBarSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

getHorizontalLabel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings

getHorizontalLabel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings

getHost() - Method in class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment

getHoughArray() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines

getHoughArrayNMSNeighborhoodSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

getHoughArrayNMSNeighborhoodSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

getHTML() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

getHtml() - Method in class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLText

getHTMLByDialog(JIPipeDesktopWorkbench, Component, String, String, HTMLText) - Static method in class org.hkijena.jipipe.utils.UIUtils

Gets a formatted HTML string by dialog

getHueThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

getIcon() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory

getIcon() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation

getIcon() - Method in interface org.hkijena.jipipe.api.data.JIPipeLegacyDataOperation

getIcon() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData

getIcon() - Method in class org.hkijena.jipipe.api.environments.JIPipeEnvironment

Returns the icon displayed in the UI for the current status

getIcon() - Method in class org.hkijena.jipipe.api.environments.JIPipeProcessArtifactEnvironment

getIcon() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

getIcon() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool

getIcon() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

getIcon() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool

getIcon() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

getIcon() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

getIcon(Object) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm.IterationModeEnumInfo

getIcon() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal.Snapshot

getIcon() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournalSnapshot

getIcon() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal.Snapshot

getIcon() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

getIcon() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory

getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory

getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory

getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory

getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory

getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory

getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory

getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory

getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory

getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory

getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory

getIcon() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewCompartmentNodeDatabaseEntry

getIcon() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

getIcon() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

getIcon() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

getIcon() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

getIcon() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

getIcon() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry

getIcon(Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeColumnMatchingEnumInfo

getIcon() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

Gets the icon for this node info

getIcon() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory

Icon shown in the UI

getIcon() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction

getIcon() - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry.InstallerEntry

getIcon(JIPipeRuntimePartition) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration

getIcon() - Method in enum org.hkijena.jipipe.api.settings.JIPipeDefaultApplicationSettingsSheetCategory

getIcon() - Method in enum org.hkijena.jipipe.api.settings.JIPipeDefaultProjectSettingsSheetCategory

getIcon() - Method in interface org.hkijena.jipipe.api.settings.JIPipeSettingsSheet

The icon of the settings sheet

getIcon() - Method in class org.hkijena.jipipe.desktop.api.nodes.JIPipeDesktopNodeQuickAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.PinnedDummyNodeTypeCategory

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.TemplatesDummyNodeTypeCategory

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddBookmarkNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewCompartmentUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewParameterSetNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.ClearCacheNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.CollapseIOInterfaceNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DeleteCompartmentUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DeleteNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisablePassThroughNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableSaveOutputsNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableVirtualOutputNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnablePassThroughNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableSaveOutputsNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableVirtualOutputsNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.ExportCompartmentAsJsonNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.GroupNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.InvertSelectionNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.IsolateNodesUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.JsonAlgorithmToGroupNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.LockNodeLocationSizeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.LowerUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIDownContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUILeftContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIRightContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIUpContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeContextActionWrapperUIContextAction

getIcon() - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.OpenCacheBrowserInWindowUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RaiseUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RemoveBookmarkNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RunAndShowIntermediateResultsNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RunAndShowResultsNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SelectAllNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SelectAndMoveNodeHereNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SendToBackgroundUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SendToForegroundUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UnlockNodeLocationSizeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheOnlyPredecessorsNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheShowIntermediateNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsCopyNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsCutNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsPasteNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphCopyNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphCutNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphDuplicateNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphPasteNodeUIContextAction

getIcon() - Method in class org.hkijena.jipipe.desktop.app.history.JIPipeDesktopCurrentStateSnapshot

getIcon() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectDirectoriesSettingsSheetWrapper

getIcon() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectMetadataSettingsSheetWrapper

getIcon() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectParametersSettingsSheetWrapper

getIcon() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectPermissionsSettingsSheetWrapper

getIcon() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextPathTypeMetadata

getIcon() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopColorChooserButton

getIcon() - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopGenericListCellRenderer.RenderedItem

getIcon() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.DocumentTab

getIcon() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.SingletonTab

getIcon() - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.cellpose.Cellpose2PluginApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.cellpose.Cellpose3PluginApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePluginProjectSettings

getIcon(Object) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.PretrainedCellposeModelEnumItemInfo

getIcon() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.core.data.CopyContainingFolderDataImportOperation

getIcon() - Method in class org.hkijena.jipipe.plugins.core.data.DefaultDataDisplayOperation

getIcon() - Method in class org.hkijena.jipipe.plugins.core.data.OpenContainingFolderDataImportOperation

getIcon() - Method in class org.hkijena.jipipe.plugins.core.data.OpenInNativeApplicationDataImportOperation

getIcon() - Method in class org.hkijena.jipipe.plugins.core.nodes.JIPipeCommentNode

getIcon() - Method in class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironment

getIcon() - Method in class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironmentApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.filesystem.JIPipeFilesystemPluginApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.filesystem.resultanalysis.CopyPathDataDisplayOperation

getIcon() - Method in class org.hkijena.jipipe.plugins.filesystem.resultanalysis.OpenPathDataDisplayOperation

getIcon() - Method in class org.hkijena.jipipe.plugins.ij3d.display.AddROI3DToManagerDataDisplayOperation

getIcon() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ImageViewerUIROI3DDisplayApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsNodeTypeCategory

getIcon() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.FilamentsPluginProjectSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.ImageViewerUIFilamentDisplayApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.TSOAXApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.ijocr.settings.OCRPluginProjectSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.ijocr.settings.TesseractOCRApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.trackscheme.ShowTrackSchemeDataDisplayOperation

getIcon() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUISpotsDisplayApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUITracksDisplayApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginProjectSettings

getIcon(Object) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelColorMapEnumItemInfo

getIcon() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.AddToROIManagerDataDisplayOperation

getIcon() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInImageJ3DViewerDataDisplayOperation

getIcon() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInImageJDataDisplayOperation

getIcon() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInNapariDataDisplayOperation

getIcon() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImportImageJPathDataDisplayOperation

getIcon() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesProjectSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageViewerUIROI2DDisplayApplicationSettings

getIcon(Object) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.BitDepthEnumItemInfo

getIcon(Object) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.OptionalBitDepthEnumItemInfo

getIcon() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawer2DTool

getIcon() - Method in class org.hkijena.jipipe.plugins.imageviewer.settings.ImageViewerGeneralUIApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.imageviewer.settings.LegacyImageViewer2DUIApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.napari.NapariPluginApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.nodeexamples.LoadExampleContextMenuAction

getIcon() - Method in class org.hkijena.jipipe.plugins.nodetemplate.AddTemplateContextMenuAction

getIcon() - Method in class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment

getIcon() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginProjectSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginProjectSettings

getIcon(Object) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.PretrainedOmnipose0ModelEnumItemInfo

getIcon(Object) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DefaultEnumItemInfo

getIcon(Object) - Method in interface org.hkijena.jipipe.plugins.parameters.api.enums.EnumItemInfo

Extracts an icon for the enum value

getIcon(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.colors.ColorMapEnumItemInfo

getIcon(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeDesktopArtifactQueryParameterEditorUI.ArtifactEnumItemInfo

getIcon() - Method in class org.hkijena.jipipe.plugins.plots.ui.resultanalysis.OpenPlotInJIPipeDataDisplayOperation

getIcon(Object) - Method in class org.hkijena.jipipe.plugins.plots.utils.ColorMapEnumItemInfo

getIcon() - Method in class org.hkijena.jipipe.plugins.processes.JIPipeProcessesPluginApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

getIcon() - Method in class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonPluginAdapterApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.python.PythonEnvironment

getIcon() - Method in class org.hkijena.jipipe.plugins.python.PythonPackageLibraryEnvironment

getIcon() - Method in class org.hkijena.jipipe.plugins.python.PythonPluginApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.python.PythonPluginProjectSettings

getIcon(Object) - Method in class org.hkijena.jipipe.plugins.r.algorithms.ImportRDatasetAlgorithm.DatasetEnumItemInfo

getIcon() - Method in class org.hkijena.jipipe.plugins.r.REnvironment

getIcon() - Method in class org.hkijena.jipipe.plugins.r.RPluginApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.r.RPluginProjectSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeBackupApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDataExporterApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDataStorageProjectSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDefaultCacheDisplayApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDefaultResultImporterApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDownloadsApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeExtensionApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeHistoryJournalApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNodeTemplateApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectAuthorsApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectDefaultsApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeTableViewerUIApplicationSettings

getIcon() - Method in class org.hkijena.jipipe.plugins.tables.display.CacheAwareOpenResultsTableInJIPipeDataDisplayOperation

getIcon() - Method in class org.hkijena.jipipe.plugins.tables.display.OpenResultsTableInImageJDataDisplayOperation

getIcon() - Method in class org.hkijena.jipipe.plugins.tables.display.OpenResultsTableInJIPipeTabDataDisplayOperation

getIcon() - Method in class org.hkijena.jipipe.plugins.utils.contextmenu.ParameterExplorerContextMenuAction

getIcon() - Method in class org.hkijena.jipipe.plugins.utils.display.ImportJIPipeProjectDataDisplayOperation

getIcon() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

getIcon128FromResources(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

Returns an icon from JIPipe resources

getIcon128FromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager

getIcon128URLFromResources(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

Returns the URL of a 128x128 icon.

getIcon12FromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager

getIcon16FromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager

getIcon16URLFromResources(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

Returns the URL of a 16x16 icon.

getIcon32FromResources(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

Returns an icon from JIPipe resources

getIcon32FromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager

getIcon32URLFromResources(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

Returns the URL of a 32x32 icon.

getIcon32URLFromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

getIcon64FromResources(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

Returns an icon from JIPipe resources

getIcon64FromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager

getIcon64URLFromResources(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

Returns the URL of a 64x64 icon.

getIcon8FromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager

getIconBaseColor() - Static method in class org.hkijena.jipipe.utils.UIUtils

getIconFor(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Returns the icon for a datatype

getIconFor(JIPipeNodeInfo) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Returns the icon for a node

getIconFromColor(Color) - Static method in class org.hkijena.jipipe.utils.UIUtils

Creates 16x16 a color icon

getIconFromResources(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

Returns an icon from JIPipe resources

getIconFromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager

getIconHeight() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopAnimatedIcon

getIconHeight() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.MonochromeJIPipeDesktopColorIcon

getIconHeight() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.OverlayJIPipeDesktopColorIcon

getIconHeight() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.SolidColorIcon

getIconHeight() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.SpinnerIcon

getIconHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelColorMapIcon

getIconHeight() - Method in class org.hkijena.jipipe.plugins.parameters.library.colors.ColorMapIcon

getIconHeight() - Method in class org.hkijena.jipipe.plugins.plots.utils.ColorMapIcon

getIconHeight() - Method in class org.hkijena.jipipe.utils.CompositeIcon

getIconHeight() - Method in class org.hkijena.jipipe.utils.ui.CheckBoxIcon

getIconHeight() - Method in class org.hkijena.jipipe.utils.ui.CheckBoxMenuItemIcon

getIconImage() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

getIconInverted12FromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager

getIconInverted32FromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager

getIconInvertedFromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager

getIconName() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.IconRef

getIcons128BasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

getIcons16BasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

getIcons32BasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

getIcons64BasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

getIconSelected() - Method in class org.hkijena.jipipe.utils.CustomStateLessToggleButton

getIconUnselected() - Method in class org.hkijena.jipipe.utils.CustomStateLessToggleButton

getIconURL() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

Gets the icon for this node info

getIconURL() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterCollectionContextAction

getIconURL() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionContextAction

URL to the icon

getIconURL() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

getIconURL() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterCollectionContextAction

getIconURLFor(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

getIconURLFor(JIPipeDataInfo) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

getIconURLFor(JIPipeNodeInfo) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Returns the icon resource path URL for a node

getIconURLFromResources(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

Returns the URL of a 16x16 icon.

getIconURLFromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager

getIconWidth() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopAnimatedIcon

getIconWidth() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.MonochromeJIPipeDesktopColorIcon

getIconWidth() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.OverlayJIPipeDesktopColorIcon

getIconWidth() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.SolidColorIcon

getIconWidth() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.SpinnerIcon

getIconWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelColorMapIcon

getIconWidth() - Method in class org.hkijena.jipipe.plugins.parameters.library.colors.ColorMapIcon

getIconWidth() - Method in class org.hkijena.jipipe.plugins.plots.utils.ColorMapIcon

getIconWidth() - Method in class org.hkijena.jipipe.utils.CompositeIcon

getIconWidth() - Method in class org.hkijena.jipipe.utils.ui.CheckBoxIcon

getIconWidth() - Method in class org.hkijena.jipipe.utils.ui.CheckBoxMenuItemIcon

getId() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory

getId() - Method in interface org.hkijena.jipipe.api.data.context.JIPipeDataContext

Gets the ID of the context

getId() - Method in class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext

getId() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation

getId() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo

getId() - Method in interface org.hkijena.jipipe.api.data.JIPipeLegacyDataOperation

getId() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

getId() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory

getId() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory

getId() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory

getId() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory

getId() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory

getId() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory

getId() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory

getId() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory

getId() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory

getId() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory

getId() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory

getId() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewCompartmentNodeDatabaseEntry

getId() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

getId() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

getId() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

getId() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

getId() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

getId() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry

getId() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo

getId() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

getId() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

Generates an Id for this info

getId() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory

Unique identifier of this category

getId() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification

getId() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterTypeInfo

getId() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterTypeInfo

getId() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectTemplate

getId() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ColumnOperationEntry

getId() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ExpressionFunctionEntry

getId(Class<? extends JIPipeMetadataObject>) - Method in class org.hkijena.jipipe.api.registries.JIPipeMetadataRegistry

getId() - Method in interface org.hkijena.jipipe.api.settings.JIPipeSettingsSheet

The unique ID of the settings sheet

getId() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.PinnedDummyNodeTypeCategory

getId() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.TemplatesDummyNodeTypeCategory

getId() - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderPackage

getId() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectDirectoriesSettingsSheetWrapper

getId() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectMetadataSettingsSheetWrapper

getId() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectParametersSettingsSheetWrapper

getId() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectPermissionsSettingsSheetWrapper

getId() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddParameterDialog.Settings

getId() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

getId() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Task

getId() - Method in class org.hkijena.jipipe.JIPipeService.DatatypeRegisteredEvent

getId() - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.cellpose.Cellpose2PluginApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.cellpose.Cellpose3PluginApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePluginProjectSettings

getId() - Method in enum org.hkijena.jipipe.plugins.cellpose.legacy.PretrainedLegacyCellpose2InferenceModel

Deprecated.

getId() - Method in enum org.hkijena.jipipe.plugins.cellpose.legacy.PretrainedLegacyCellpose2TrainingModel

Deprecated.

getId() - Method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp2.PretrainedCellpose2SegmentationModel

getId() - Method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseType

getId() - Method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp3.PretrainedCellpose3DenoiseModel

getId() - Method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp3.PretrainedCellpose3SegmentationModel

getId() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

getId() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.core.data.CopyContainingFolderDataImportOperation

getId() - Method in class org.hkijena.jipipe.plugins.core.data.DefaultDataDisplayOperation

getId() - Method in class org.hkijena.jipipe.plugins.core.data.OpenContainingFolderDataImportOperation

getId() - Method in class org.hkijena.jipipe.plugins.core.data.OpenInNativeApplicationDataImportOperation

getId() - Method in class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironmentApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.filesystem.JIPipeFilesystemPluginApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.filesystem.resultanalysis.CopyPathDataDisplayOperation

getId() - Method in class org.hkijena.jipipe.plugins.filesystem.resultanalysis.OpenPathDataDisplayOperation

getId() - Method in class org.hkijena.jipipe.plugins.ij3d.display.AddROI3DToManagerDataDisplayOperation

getId() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ImageViewerUIROI3DDisplayApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsNodeTypeCategory

getId() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.FilamentsPluginProjectSettings

getId() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.ImageViewerUIFilamentDisplayApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.TSOAXApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.ijocr.settings.OCRPluginProjectSettings

getId() - Method in class org.hkijena.jipipe.plugins.ijocr.settings.TesseractOCRApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.trackscheme.ShowTrackSchemeDataDisplayOperation

getId() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo

getId() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo

getId() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUISpotsDisplayApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUITracksDisplayApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginProjectSettings

getId() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

getId() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DAlgorithm.Operation

Deprecated.

getId() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.AddToROIManagerDataDisplayOperation

getId() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInImageJ3DViewerDataDisplayOperation

getId() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInImageJDataDisplayOperation

getId() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInNapariDataDisplayOperation

getId() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImportImageJPathDataDisplayOperation

getId() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesProjectSettings

getId() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageViewerUIROI2DDisplayApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.imageviewer.settings.ImageViewerGeneralUIApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.imageviewer.settings.LegacyImageViewer2DUIApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.napari.NapariPluginApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginProjectSettings

getId() - Method in enum org.hkijena.jipipe.plugins.omnipose.legacy.parameters.LegacyOmnipose0Model

Deprecated.

getId() - Method in enum org.hkijena.jipipe.plugins.omnipose.legacy.parameters.LegacyOmnipose0PretrainedModel

Deprecated.

getId() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginProjectSettings

getId() - Method in enum org.hkijena.jipipe.plugins.omnipose.parameters.PretrainedOmnipose0Model

getId() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.EnumParameterTypeInfo

getId() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanParameterTypeInfo

getId() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanPrimitiveParameterTypeInfo

getId() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ByteParameterTypeInfo

getId() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BytePrimitiveParameterTypeInfo

getId() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.DoubleParameterTypeInfo

getId() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.DoublePrimitiveParameterTypeInfo

getId() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.FloatParameterTypeInfo

getId() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.FloatPrimitiveParameterTypeInfo

getId() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.IntParameterTypeInfo

getId() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.IntPrimitiveParameterTypeInfo

getId() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.LongParameterTypeInfo

getId() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.LongPrimitiveParameterTypeInfo

getId() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ShortParameterTypeInfo

getId() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ShortPrimitiveParameterTypeInfo

getId() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExporterRef

getId() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

getId() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImporterRef

getId() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRef

getId() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2AlgorithmInfo

getId() - Method in class org.hkijena.jipipe.plugins.plots.ui.resultanalysis.OpenPlotInJIPipeDataDisplayOperation

getId() - Method in class org.hkijena.jipipe.plugins.processes.JIPipeProcessesPluginApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonPluginAdapterApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.python.PythonPluginApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.python.PythonPluginProjectSettings

getId() - Method in class org.hkijena.jipipe.plugins.r.RPluginApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.r.RPluginProjectSettings

getId() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeBackupApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDataExporterApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDataStorageProjectSettings

getId() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDefaultCacheDisplayApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDefaultResultImporterApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDownloadsApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeExtensionApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeHistoryJournalApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNodeTemplateApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectAuthorsApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectDefaultsApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeTableViewerUIApplicationSettings

getId() - Method in class org.hkijena.jipipe.plugins.tables.display.CacheAwareOpenResultsTableInJIPipeDataDisplayOperation

getId() - Method in class org.hkijena.jipipe.plugins.tables.display.OpenResultsTableInImageJDataDisplayOperation

getId() - Method in class org.hkijena.jipipe.plugins.tables.display.OpenResultsTableInJIPipeTabDataDisplayOperation

getId() - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnConversionParameter

The ID of the selected entry

getId() - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnIntegrationParameter

The ID of the selected entry

getId() - Method in class org.hkijena.jipipe.plugins.utils.display.ImportJIPipeProjectDataDisplayOperation

getId() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

getIdAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm

getIdAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm

getIdAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROPlateReferenceAlgorithm

getIdAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm

getIdAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

getIdAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

getIdAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROImageAlgorithm

getIdOf(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Gets the ID of the data type

getIdOf(ImageJDataImporter) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry

getIdOf(ImageJDataExporter) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry

getIgnoredAnnotationColumns() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

Returns annotation types that should be ignored by the internal logic.

getIgnoredAnnotationColumns() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm

Returns annotation types that should be ignored by the internal logic.

getIgnoredAnnotationColumns() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.CreateStackAlgorithm

getImage() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData

getImage() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Returns the image to render.

getImage() - Method in class org.hkijena.jipipe.plugins.clij2.datatypes.CLIJImageData

getImage() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

getImage() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.ModelData

getImage() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegImage

Return the full-size image array.

getImage() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

The ImageJ image

getImage() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.OMEImageData

getImage() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImagePlusResultImportRun

getImage() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.OMEImageResultImportRun

getImage() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

getImage() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

getImage() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

getImage(int) - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

getImage(ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

getImage(int, int, int) - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

getImage(long, long) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROGateway

Gets a dataset

getImage(int) - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

getImage(ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

getImage(int, int, int) - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

getImage() - Method in class org.hkijena.jipipe.plugins.parameters.library.images.ImageParameter

getImageArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm

getImageArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

getImageFile() - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail

getImageFilters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ImagePlusFromGUI

getImageFiltersOperation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ImagePlusFromGUI

getImageFromClipboard(int) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils

Get an image off the system clipboard.

getImageFromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

getImageHeightAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

getImageHeightAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

getImageHeightAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm

getImageId() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROImageReferenceData

getImageIds() - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROImageReferenceDataSource

getImageImportParameters() - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROImageAlgorithm

getImageJAdapters() - Static method in class org.hkijena.jipipe.JIPipe

getImageJDataAdapterRegistry() - Method in class org.hkijena.jipipe.JIPipe

getImageJDataAdapterRegistry() - Method in interface org.hkijena.jipipe.JIPipeService

getImageJDir() - Static method in class org.hkijena.jipipe.utils.PathUtils

Gets the ImageJ directory

getImageJPlugins() - Method in class org.hkijena.jipipe.JIPipe

getImageJUpdaterRoot() - Static method in class org.hkijena.jipipe.utils.CoreImageJUtils

getImageJUpdateSiteDependencies() - Method in interface org.hkijena.jipipe.JIPipeDependency

List of ImageJ update sites that are dependencies

getImageJUpdateSiteDependencies() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

getImageJUpdateSiteDependencies() - Method in class org.hkijena.jipipe.JIPipeMutableDependency

getImageJUpdateSiteDependencies() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPlugin

getImageJUpdateSiteDependencies() - Method in class org.hkijena.jipipe.plugins.forms.FormsPlugin

getImageJUpdateSiteDependencies() - Method in class org.hkijena.jipipe.plugins.ij3d.IJ3DPlugin

getImageJUpdateSiteDependencies() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingPlugin

getImageJUpdateSiteDependencies() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2Plugin

getImageJUpdateSiteDependencies() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.ImageJAlgorithmsPlugin

getImageJUpdateSiteDependencies() - Method in class org.hkijena.jipipe.plugins.opencv.OpenCvPlugin

getImageJUpdateSites() - Method in interface org.hkijena.jipipe.JIPipeDependency

List of ImageJ update sites that provide the dependency

getImageJUpdateSites() - Method in class org.hkijena.jipipe.JIPipeMutableDependency

getImageOrExpand(ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

getImageOrExpand(int, int, int) - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

getImageOrExpand(ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

getImageOrExpand(int, int, int) - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

getImageParameters() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode

getImageParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

getImagePlus() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.InputEntry

getImagePlus() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelledImage

getImagePlus() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

getImagePlus() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

getImageProcessorType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

Returns the appropriate ImageProcessor that stores the pixel data.

getImageProperties(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Returns the persistent properties of a ImagePlus as map

getImageRegistrationFeatureModel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationParameters

getImageRegistrationModel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationParameters

getImages() - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

getImages() - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

getImageSubsamplingFactor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

getImageTitle() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata.ChangeImageMetadataFromExpressionsAlgorithm

getImageTypeAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

getImageTypeAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

getImageURL() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Return a URL for the image source, or null if it could not be determined.

getImageViewer() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

getImageViewerPanel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.MaskDrawerFormData

getImageViewerPanel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.ROIDrawerFormData

getImageViewerPanel() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerLUTEditor

getImageViewerPanel() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerOpacityLUTEditor

getImageViewerPanel2D() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

getImageWeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

getImageWidthAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

getImageWidthAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

getImageWidthAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm

getImportDelay() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.MacroWrapperAlgorithm

getImportedImageJDataType() - Method in class org.hkijena.jipipe.api.compat.DataTableImageJDataImporter

getImportedImageJDataType() - Method in class org.hkijena.jipipe.api.compat.EmptyImageJDataImporter

getImportedImageJDataType() - Method in interface org.hkijena.jipipe.api.compat.ImageJDataImporter

getImportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.compat.LegacyCellposeModelImageJImporter

getImportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.compat.LegacyCellposeSizeModelImageJImporter

getImportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.clij2.compat.CLIJ2DataFromImageWindowImageJImporter

getImportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.filesystem.compat.PathDataFromTableImageJImporter

getImportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.ij3d.compat.ROI3DImageJImporter

getImportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.compat.IJ2DataFromImageWindowImageJImporter

getImportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.ImagePlusDataFromImageWindowImageJImporter

getImportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.OMEImageFromImageWindowImageJImporter

getImportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.RoiManagerImageJImporter

getImportedImageJDataType() - Method in class org.hkijena.jipipe.plugins.tables.compat.ResultsTableDataImageJImporter

getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.api.compat.DataTableImageJDataImporter

getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.api.compat.EmptyImageJDataImporter

getImportedJIPipeDataType() - Method in interface org.hkijena.jipipe.api.compat.ImageJDataImporter

getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.compat.LegacyCellposeModelImageJImporter

getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.compat.LegacyCellposeSizeModelImageJImporter

getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.clij2.compat.CLIJ2DataFromImageWindowImageJImporter

getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.filesystem.compat.PathDataFromTableImageJImporter

getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.ij3d.compat.ROI3DImageJImporter

getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.compat.IJ2DataFromImageWindowImageJImporter

getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.ImagePlusDataFromImageWindowImageJImporter

getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.OMEImageFromImageWindowImageJImporter

getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.RoiManagerImageJImporter

getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.tables.compat.ResultsTableDataImageJImporter

getImporter() - Method in class org.hkijena.jipipe.api.compat.ImageJDataImporterUI

getImporter() - Method in class org.hkijena.jipipe.api.compat.ImageJDataImportOperation

getImporterById(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry

getImporterId() - Method in class org.hkijena.jipipe.api.compat.ImageJDataImportOperation

getImporterType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.RunImageJImporterAlgorithm

getImportParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.RunImageJImporterAlgorithm

getImprovedStrokeBackgroundColor() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getInactiveControlTextColor() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

Returns the inactive control text color.

getInactiveControlTextColor() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

Returns the inactive control text color.

getInbox() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification

getInbox() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.DismissedEvent

getInbox() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.PushedEvent

getInbox() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.UpdatedEvent

getIncludeReflectionParameters() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

getIncludeReflectionParameters() - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

getIncludeReflectionParameters() - Method in class org.hkijena.jipipe.api.grouping.JsonAlgorithm

getIncludeReflectionParameters() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeCustomParameterCollection

If true, also include parameters discovered via reflection.

getIncludeReflectionParameters() - Method in class org.hkijena.jipipe.desktop.app.settings.project.JIPipeDesktopMergedProjectSettings

getIncrements() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData

getIndent() - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.PrettifyXMLAlgorithm

getIndex() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableRowInfo

getIndex() - Method in class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceParameter

getIndex() - Method in enum org.hkijena.jipipe.plugins.ijmultitemplatematching.TemplateMatchingMethod

getIndexAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm

getIndexAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm

getIndexColumn() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.ExtractROI3DMetadataAlgorithm

getIndexColumn() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.ExtractROIMetadataAlgorithm

getIndexIncrement() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

getIndicesC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm

getIndicesT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm

getIndicesZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm

getInfo() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot

getInfo() - Method in class org.hkijena.jipipe.api.environments.JIPipeEnvironment

Returns more detailed information (e.g., the executed script environment path).

getInfo() - Method in class org.hkijena.jipipe.api.environments.JIPipeProcessArtifactEnvironment

getInfo() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the JIPipeNodeInfo that describes this algorithm

getInfo() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.NodeInfoDeselectedEvent

getInfo() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.NodeInfoSelectedEvent

getInfo() - Method in class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironment

getInfo() - Method in class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment

getInfo() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRef

getInfo() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeNodeInfoRef

getInfo() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeParameterTypeInfoRef

getInfo() - Method in class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

getInfo() - Method in class org.hkijena.jipipe.plugins.python.PythonEnvironment

getInfo() - Method in class org.hkijena.jipipe.plugins.python.PythonPackageLibraryEnvironment

getInfo() - Method in class org.hkijena.jipipe.plugins.r.REnvironment

getInfoByFieldClass(Class<?>) - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry

Return a parameter type by its field class

getInfoById(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Gets a matching info by Id

getInfoById(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry

Returns a parameter type info by ID

getInitialDirectory() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

getInitializationParameters() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

getInitialSigma() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SIFTParameters

getInitialValue() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterKeyPickerUI.ParameterEntry

getInput() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter

getInputAnnotation() - Method in class org.hkijena.jipipe.plugins.forms.utils.SingleAnnotationIOSettings

getInputAnnotationByFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

getInputAnnotationColumnIntersection(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

getInputAnnotationColumnUnion(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

getInputClass() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter

getInputColumn() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm

getInputColumn() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

getInputColumns() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2Algorithm

getInputColumns() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTablesAlgorithm

Deprecated.

getInputColumns() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm

getInputColumns() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm

getInputColumns() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm

getInputData(String, Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets stored data from an input slot

getInputData(String, int, Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets stored data from an input slot

getInputData(JIPipeDataSlot, Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets stored data from an input slot

getInputData(JIPipeDataSlot, int, Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets stored data from an input slot

getInputData(String, Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Gets stored data from an input slot

getInputData(JIPipeDataSlot, Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Gets stored data from an input slot

getInputDataAnnotations(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets the original annotations of given slot This returns all annotations (of all rows)

getInputDataAnnotations(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets the original annotations of given slot This returns all annotations (of all rows)

getInputDataAnnotations(JIPipeDataSlot, Collection<Integer>) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets the original annotations of given slot

getInputDataAnnotations(String, Collection<Integer>) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets the original annotations of given slot

getInputDataAnnotations(JIPipeDataSlot, int) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets the original annotations of given slot

getInputDataAnnotations(String, int) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets the original annotations of given slot

getInputDataAnnotations(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Gets the original annotations of given slot

getInputDataAnnotations(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Gets the original annotations of given slot

getInputDataStore(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets stored data from an input slot

getInputDataStore(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets stored data from an input slot

getInputIncomingSourceSlots(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

If exists, returns the output slots that provide data for the input slot Returns and empty list if there are none

getInputModuleIO() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

getInputNMSNeighborhoodSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

getInputNMSNeighborhoodSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

getInputRow(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Returns the row of the data in the original data slot

getInputRow(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Returns the row of the data in the original data slot

getInputRows(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Returns the row indices that belong to this data interface

getInputRows(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Returns the row indices that belong to this data interface

getInputSlot(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the input slot with the specified name.

getInputSlotImporters() - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration

getInputSlotMap() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Gets all input slot instances

getInputSlotMap() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

getInputSlotName(ModuleItem<?>) - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

getInputSlotNames() - Method in interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationStep

Gets the names of all input slots that are referenced

getInputSlotNames() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

getInputSlotNames() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

getInputSlotOrder() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

getInputSlotOrder() - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration

getInputSlotOrder() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Gets the input slot order

getInputSlotRowIndices(String) - Method in interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationStep

Returns the referenced indices of given input slot name

getInputSlotRowIndices(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

getInputSlotRowIndices(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

getInputSlotRows() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Raw access to all data stored in the batch

getInputSlotRows() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Raw access to all data stored in the batch

getInputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

getInputSlots() - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration

getInputSlots() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewCompartmentNodeDatabaseEntry

getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

getInputSlots() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry

getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo

getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

getInputSlots() - Method in interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationStep

Gets the input slots that are referenced

getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns all input slots ordered by the slot order

getInputSlots() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

Returns general input data.

getInputSlots() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

getInputSlots() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo

getInputSlots() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo

getInputSlots() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

getInputSlots() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2AlgorithmInfo

getInputSlotsWithRole(JIPipeDataSlotRole) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Gets all input slots that have the specified role

getInputSlotToArgIndexMap() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

getInputsString() - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration

getInputStream() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree

getInputTextAnnotations(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets the original annotations of given slot This returns all annotations (of all rows)

getInputTextAnnotations(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets the original annotations of given slot This returns all annotations (of all rows)

getInputTextAnnotations(JIPipeDataSlot, Collection<Integer>) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets the original annotations of given slot

getInputTextAnnotations(String, Collection<Integer>) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets the original annotations of given slot

getInputTextAnnotations(JIPipeDataSlot, int) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets the original annotations of given slot

getInputTextAnnotations(String, int) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets the original annotations of given slot

getInputTextAnnotations(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Gets the original annotations of given slot

getInputTextAnnotations(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Gets the original annotations of given slot

getInputToImageJExporters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.MacroWrapperAlgorithm

getInputType() - Method in interface org.hkijena.jipipe.api.data.JIPipeDataConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ImplicitResultsTableDataConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.clij2.datatypes.CLIJImageToImagePlusDataConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.clij2.datatypes.ImagePlusDataToCLIJImageDataConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImplicitPathTypeConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.FilamentsToRoi3dDataTypeConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.FilamentsToRoiDataTypeConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.SpotsToRoiConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.imagej2.converters.ImageJ1ToImageJ2Converter

getInputType() - Method in class org.hkijena.jipipe.plugins.imagej2.converters.ImageJ2ToImageJ1Converter

getInputType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.ImagePlusToOMEImageTypeConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.ImageToLUTTypeConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.ImplicitImageTypeConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.LUTToImageTypeConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.OMEImageToImagePlusTypeConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.OmeImageToOMEXMLTypeConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.OMEImageToROITypeConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.PlotToImageTypeConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImageJImageToImpImageDataTypeConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageToImageJImageDataTypeConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.multiparameters.converters.ParametersDataToResultsTableDataConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.ImageJToOpenCvDataTypeConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvToImageJDataTypeConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.plots.converters.PlotToTableConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.strings.StringDataConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.tables.DoubleArrayColumnToTableConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.tables.StringArrayColumnToTableConverter

getInputType() - Method in class org.hkijena.jipipe.plugins.utils.datatypes.PathDataToJIPipeOutputConverter

getInsertedObject() - Method in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderInserterUI

getInserterParameterEditorUIList() - Method in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderInserterUI

getInsets() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.OverlayJIPipeDesktopColorIcon

getInsets() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Action

getInsideArea(Rectangle, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

Generates the rectangle defined by the definition.

getInstallDir() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

getInstalledEnvironment() - Method in class org.hkijena.jipipe.api.environments.JIPipeExternalEnvironmentInstaller

Returns the final environment after installation

getInstalledEnvironment() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstaller

getInstalledEnvironment() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectCondaEnvPythonInstaller

getInstalledEnvironment() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectSystemPythonInstaller

getInstalledEnvironment() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectVirtualEnvPythonInstaller

getInstallerClass() - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry.InstallerEntry

getInstallers(Class<? extends JIPipeEnvironment>) - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry

Returns a sorted list of installer items for the environment

getInstance(Class<? extends JIPipeData>) - Static method in class org.hkijena.jipipe.api.data.JIPipeDataInfo

Returns an instance for the data class.

getInstance(String) - Static method in class org.hkijena.jipipe.api.data.JIPipeDataInfo

Returns an instance for the data type ID.

getInstance() - Static method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue

getInstance() - Static method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase

getInstance() - Static method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox

getInstance() - Static method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

getInstance() - Static method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection

getInstance() - Static method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopSplashScreen

getInstance() - Static method in class org.hkijena.jipipe.JIPipe

getInstance() - Method in class org.hkijena.jipipe.JIPipeJavaExtensionInitializationInfo

getInstance() - Static method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.cellpose.Cellpose2PluginApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.cellpose.Cellpose3PluginApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.filesystem.JIPipeFilesystemPluginApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ImageViewerUIROI3DDisplayApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.ijfilaments.settings.ImageViewerUIFilamentDisplayApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.ijfilaments.settings.TSOAXApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.ijocr.settings.TesseractOCRApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUISpotsDisplayApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUITracksDisplayApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageViewerUIROI2DDisplayApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.imageviewer.settings.ImageViewerGeneralUIApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.imageviewer.settings.LegacyImageViewer2DUIApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.napari.NapariPluginApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.omero.OMEROPluginApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginApplicationSettings

getInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExporterRef

getInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

getInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImporterRef

getInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRef

getInstance(JIPipeDesktopWorkbench, Component, JIPipeParameterAccess, ParameterTable, JIPipeDesktopGraphCanvasUI) - Static method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableEditorWindow

getInstance() - Static method in class org.hkijena.jipipe.plugins.processes.JIPipeProcessesPluginApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonPluginAdapterApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.python.PythonPluginApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.r.RPluginApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeBackupApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeDataExporterApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeDefaultCacheDisplayApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeDefaultResultImporterApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeDownloadsApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeExtensionApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeHistoryJournalApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeNodeTemplateApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectAuthorsApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectDefaultsApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

getInstance() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeTableViewerUIApplicationSettings

getInstanceClass() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

getInstanceClass() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo

getInstanceClass() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

getInstanceClass() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

The algorithm class that is generated

getInstanceClass() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

getInstanceClass() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo

getInstanceClass() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo

getInstanceClass() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

getInstanceClass() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2AlgorithmInfo

getInstanceFromRaw() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeExtensionApplicationSettings

Gets an instance from the raw properties file.

getInstanceGenerator() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

getIntegerByDialog(Component, String, String, int, int, int) - Static method in class org.hkijena.jipipe.utils.UIUtils

Gets an integer by dialog

getIntegers(int, int, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRange

Generates the list of integers based on the value

getIntegersFromRangeString(String) - Static method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRange

Converts a range string of format [range];[range];... to a list of integers

getIntegrationFunction() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator

getIntegrationFunction() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm

getIntegrationFunctionBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator

getIntegrationFunctionBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator

getIntegrationFunctionForeground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator

getIntegrationFunctionForeground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator

getIntegrationScale() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.StructureFeatureAlgorithm

getIntensityScaling() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXInitializationParameters

getIntermediateAlgorithms() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Returns all nodes that have at least one connected algorithm that uses its generated data.

getInternalGradientRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

getInternalPath() - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeDataStorage

The current path relative to the root storage

getInternalPath() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage

getInternalPath() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage

getInternalPath() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage

getInternalPath() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPWriteDataStorage

getInternalPath() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableArchive

getInternalStoragePath() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the internal storage path relative to the output folder.

getInterpolationMethod() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

getInterpolationMethod() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm

getInterpolationMethod() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.ImageParameters

getInterruptedEventEmitter() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

getInterruptedEventEmitter() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableWorker

getInvertedMode() - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI.TrackRenderer

getIoInputSlots() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

getIoMode() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNext

getIoMode() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPathEditorComponent

getIoMode() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

getItemComparator() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopPickerDialog

GetItemFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

GetItemFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.GetItemFunction

getItemListRenderer() - Method in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDataTypeCompendiumUI

getItemListRenderer() - Method in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopAlgorithmCompendiumUI

getItemListRenderer() - Method in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopCompendiumUI

Returns the renderer for the items

getItemMargin() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Returns the item margin.

GetItemOrDefaultFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

GetItemOrDefaultFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.GetItemOrDefaultFunction

getItems() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.EnumFormData

getIterationMode() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

getIterationMode() - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

getIterationMode() - Method in class org.hkijena.jipipe.api.grouping.JsonAlgorithm

getIterationMode() - Method in class org.hkijena.jipipe.api.looping.LoopStartNode

Deprecated.

getIterationMode() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

getIterations() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ErodeEndVerticesAlgorithm

getIterations() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm

getIterations() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.RemoveLargestRegionAlgorithm

getIterations() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.RemoveLargestLabelAlgorithm

getIterations() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm

getIterationStepIndexAnnotation() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm

getIterationStepIndexAnnotation() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm

getJaccardIndexAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm

getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeApplicationSettingsRegistry

getJiPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry

getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry

getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry

getJiPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeGraphEditorToolRegistry

getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry

getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeMetadataRegistry

getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

getJiPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry

getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectSettingsRegistry

getJiPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeRecentProjectsRegistry

getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeUtilityRegistry

getJIPipe() - Method in class org.hkijena.jipipe.desktop.api.registries.JIPipeCustomMenuRegistry

getJIPipe() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopSplashScreen

getJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.DatasetImageJ2ModuleInput

getJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.DataSlotModuleInput

getJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.ImagePlusImageJ2ModuleInput

getJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.IntervalImageJ2ModuleInput

getJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.IterableImageJ2ModuleInput

getJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.OutOfBoundsFactoryImageJ2ModuleInput

getJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.RandomAccessibleImageJ2ModuleInput

getJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.ShapeImageJ2ModuleInput

getJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.DatasetImageJ2ModuleOutput

getJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.DataSlotModuleOutput

getJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.ImagePlusImageJ2ModuleOutput

getJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.IntervalImageJ2ModuleOutput

getJIPipeDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.RandomAccessibleImageJ2ModuleOutput

getJIPipeIcon128() - Static method in class org.hkijena.jipipe.utils.UIUtils

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.ByteArrayParameterImageJ2ModuleInput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.DoubleArrayParameterImageJ2ModuleInput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.FloatArrayParameterImageJ2ModuleInput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.IntegerArrayParameterImageJ2ModuleInput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.LongArrayParameterImageJ2ModuleInput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.ShortArrayParameterImageJ2ModuleInput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.StringArrayParameterImageJ2ModuleInput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.ParameterImageJ2ModuleInput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.BooleanParameterImageJ2ModuleInput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.ByteParameterImageJ2ModuleInput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.DoubleParameterImageJ2ModuleInput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.FloatParameterImageJ2ModuleInput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.IntegerParameterImageJ2ModuleInput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.LongParameterImageJ2ModuleInput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.ShortParameterImageJ2ModuleInput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.StringParameterImageJ2ModuleInput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.RealTypeParameterImageJ2ModuleInput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.BooleanParameterImageJ2ModuleOutput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.ByteParameterImageJ2ModuleOutput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.DoubleParameterImageJ2ModuleOutput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.FloatParameterImageJ2ModuleOutput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.IntegerParameterImageJ2ModuleOutput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.LongParameterImageJ2ModuleOutput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.ShortParameterImageJ2ModuleOutput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.StringParameterImageJ2ModuleOutput

getJIPipeParameterClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.RealTypeParameterImageJ2ModuleOutput

GetJIPipeSlotFolderAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms.meta

GetJIPipeSlotFolderAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm

GetJIPipeSlotFolderAlgorithm(GetJIPipeSlotFolderAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm

getJIPipeUserDir() - Static method in class org.hkijena.jipipe.JIPipe

Gets the JIPipe user-writable directory.

getJIPipeUserDir() - Static method in class org.hkijena.jipipe.utils.PathUtils

Returns the JIPipe user directory

getJIPipeUserDirBase() - Static method in class org.hkijena.jipipe.utils.PathUtils

Returns the base directory that contains all profiles

getJIPipeVersion() - Static method in class org.hkijena.jipipe.JIPipe

The current version of JIPipe according to the Maven-proved information

getJIPipeVersion() - Static method in class org.hkijena.jipipe.utils.VersionUtils

The current version of JIPipe according to the Maven-proved information

getJpegQuality() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImage2Algorithm

getJpegQuality() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

getJpegQuality() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm

getJpegQuality() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Video2DExporterRun

getJsonFilePath() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

getJsonNode() - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionRegistrationTask

getJsonPath() - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.AnnotateWithJsonDataAlgorithm.Entry

getJsonPath() - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.ExtractJsonDataAsTableAlgorithm.Entry

getJsonPath() - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.ExtractTextFromJsonAlgorithm

getK() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm

getK() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm

getK() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm

getK() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm

getK() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm

getKernelFunction() - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelIterating

getKernelFunction() - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelSimpleIterating

getKernelScript() - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelIterating

getKernelScript() - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelSimpleIterating

getKernelX() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersAlgorithm

getKernelY() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersAlgorithm

getKernelZ() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersAlgorithm

getKey() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess

getKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess

getKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess

getKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

getKey() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess

Returns the unique ID of this parameter

getKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterChangedEvent

getKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

getKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

getKey() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectDirectories.DirectoryEntry

getKey() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterKeyPickerUI.ParameterEntry

getKey() - Method in class org.hkijena.jipipe.desktop.commons.components.parameters.JIPipeDesktopDynamicParameterEditorDialog.ParameterEntry

getKey() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameterVariableInfo

getKey() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.ProjectUserFolderDataSource

getKey() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.utils.FilamentEdgeMetadataEntry

getKey() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.utils.FilamentsVertexMetadataEntry

getKey() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm.MetadataProperty

getKey() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ConcaveHullMoreiraSantos.Pair

getKey() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column

getKey() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column

getKey() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameterItemParameterAccess

getKey() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterInputAccess

getKey() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterOutputAccess

getKey() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterParameterAccess

getKey() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

getKey() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameter

getKey() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterKeyAccess

getKey() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterValueAccess

getKey() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ParameterColumn

getKey() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableCellAccess

getKey() - Method in class org.hkijena.jipipe.utils.scripting.MacroFlag

getKey() - Method in class org.hkijena.jipipe.utils.scripting.MacroSetting

getKeyBinding() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

getKeyBinding() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool

getKeyBinding() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

getKeyBinding() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool

getKeyBinding() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

getKeyBinding() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

getKeyBinding() - Method in class org.hkijena.jipipe.plugins.graphannotation.tools.ArrowAnnotationGraphNodeTool

getKeyBinding() - Method in class org.hkijena.jipipe.plugins.graphannotation.tools.GroupBoxAnnotationGraphNodeTool

getKeyBinding() - Method in class org.hkijena.jipipe.plugins.graphannotation.tools.ImageBoxAnnotationGraphNodeTool

getKeyBinding() - Method in class org.hkijena.jipipe.plugins.graphannotation.tools.TextBoxAnnotationGraphNodeTool

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewCompartmentUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewNodeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewParameterSetNodeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DeleteCompartmentUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DeleteNodeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableNodeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisablePassThroughNodeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableNodeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnablePassThroughNodeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.IsolateNodesUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.LockNodeLocationSizeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.LowerUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIDownContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUILeftContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIRightContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIUpContextAction

getKeyboardShortcut() - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeUIContextAction

Returns an optional keyboard shortcut.

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RaiseUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RunAndShowResultsNodeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SelectAllNodeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SelectAndMoveNodeHereNodeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SendToBackgroundUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SendToForegroundUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UnlockNodeLocationSizeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheNodeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsCopyNodeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsCutNodeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsPasteNodeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphCopyNodeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphCutNodeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphDuplicateNodeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction

getKeyboardShortcut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphPasteNodeUIContextAction

getKeyClass() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameter

getKeyColumn() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm

getKeyColumnName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator

getKeyColumnName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

getKeyValuePairExporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.manage.OMEROCreateDatasetAlgorithm

getKeyValuePairExporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROImageToDatasetAlgorithm

getKeyValuePairKey() - Method in class org.hkijena.jipipe.plugins.omero.parameters.AnnotationsToOMEROKeyValuePairExporter

getKeyValuePairs(MetadataFacility, SecurityContext, DataObject) - Static method in class org.hkijena.jipipe.plugins.omero.util.OMEROUtils

getKeyValuePairToAnnotationImporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm

getKeyValuePairToAnnotationImporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm

getKeyValuePairToAnnotationImporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROPlateReferenceAlgorithm

getKeyValuePairToAnnotationImporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm

getKeyValuePairToAnnotationImporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

getKeyValuePairToAnnotationImporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

getKeyValuePairToAnnotationImporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROImageAlgorithm

getKeyValuePairToAnnotationImporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROTableAlgorithm

getKeyValuePairValue() - Method in class org.hkijena.jipipe.plugins.omero.parameters.AnnotationsToOMEROKeyValuePairExporter

getkMeansK() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.OutlineRoiConcaveHullMoreiraSantosAlgorithm

getKnownNonAlphanumericOperatorTokens() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

getKnownPluginById(String) - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

Returns a known extension by ID If multiple extensions share the same ID, only one is returned If there is none, null will be returned

getKnownPluginById() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

getKnownPluginsList() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

getKnownTags(SecurityContext) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROGateway

getLabel(Object) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm.IterationModeEnumInfo

getLabel(Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeColumnMatchingEnumInfo

getLabel() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction

getLabel() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.FormPanelEntry

getLabel() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

getLabel() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Task

getLabel() - Method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseType

getLabel(Object) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.PretrainedCellposeModelEnumItemInfo

getLabel() - Method in enum org.hkijena.jipipe.plugins.ijocr.utils.TesseractOCREngineMode

getLabel() - Method in enum org.hkijena.jipipe.plugins.ijocr.utils.TesseractPageSegmentationMethod

getLabel(Object) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelColorMapEnumItemInfo

getLabel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm.ROINameToLabelEntry

getLabel() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJGradientOperator

getLabel() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJVectorFieldType

getLabel() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationType

getLabel() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm.Compression

getLabel(Object) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.BitDepthEnumItemInfo

getLabel() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.Measurement

getLabel(Object) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.OptionalBitDepthEnumItemInfo

getLabel(Object) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.PretrainedOmnipose0ModelEnumItemInfo

getLabel(Object) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DefaultEnumItemInfo

getLabel(Object) - Method in interface org.hkijena.jipipe.plugins.parameters.api.enums.EnumItemInfo

Extracts a custom label for the enum value

getLabel(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.colors.ColorMapEnumItemInfo

getLabel(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeDesktopArtifactQueryParameterEditorUI.ArtifactEnumItemInfo

getLabel(Object) - Method in class org.hkijena.jipipe.plugins.plots.utils.ColorMapEnumItemInfo

getLabel(Object) - Method in class org.hkijena.jipipe.plugins.r.algorithms.ImportRDatasetAlgorithm.DatasetEnumItemInfo

getLabel() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.DoubleArrayTableColumnData

getLabel() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.FloatArrayTableColumnData

getLabel() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RelabeledTableColumnData

getLabel() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RowIndexTableColumnData

getLabel() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.StringArrayTableColumnData

getLabel() - Method in interface org.hkijena.jipipe.plugins.tables.datatypes.TableColumnData

Label of this column

getLabel() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ZeroTableColumnData

getLabel() - Method in class org.hkijena.jipipe.plugins.tables.TableColumnDataReference

getLabelAssignment() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm

getLabelBackground() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.DrawerLabelSettings

getLabelBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

getLabelBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

getLabelBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelParameters

getLabelBackground() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

GetLabelBoundariesAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

GetLabelBoundariesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.GetLabelBoundariesAlgorithm

GetLabelBoundariesAlgorithm(GetLabelBoundariesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.GetLabelBoundariesAlgorithm

getLabelDataAnnotation() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

getLabelDataAnnotation() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

getLabelDataAnnotation() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

getLabelDataAnnotation() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

getLabelDataAnnotation() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

getLabelDataAnnotation() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingLabels2DAlgorithm2

getLabelDataAnnotation() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingMask2DAlgorithm2

getLabelDataAnnotation() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

getLabelDataAnnotation() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

getLabelExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

getLabelFontFamily() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

getLabelFontFamily() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelParameters

getLabelFontFamily() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

getLabelFontSize() - Method in class org.hkijena.jipipe.plugins.pipelinerender.RenderPipelineRunSettings

getLabelFontSize() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.Pie2DJFreeChartPlotData

getLabelFontSize() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.Pie3DJFreeChartPlotData

getLabelForeground() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.DrawerLabelSettings

getLabelForeground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

getLabelForeground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

getLabelForeground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelParameters

getLabelForeground() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

getLabelGenerator() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

getLabelIdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.CropLabelsAlgorithm

getLabelIdLimit() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.CropLabelsAlgorithm

getLabelIndexAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.SeparateLabelsAlgorithm

getLabelLocation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelParameters

getLabelMask(ImageProcessor, int) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageJAlgorithmUtils

getLabelNameExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm

getLabelParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

getLabels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelledImage

getLabels1Settings() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm

getLabels2Settings() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm

getLabelSelected() - Method in class org.hkijena.jipipe.utils.CustomStateLessToggleButton

getLabelSettings() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer

getLabelSize() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.DrawerLabelSettings

getLabelSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

getLabelSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

getLabelSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelParameters

getLabelSize() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

getLabelUnselected() - Method in class org.hkijena.jipipe.utils.CustomStateLessToggleButton

getLambd() - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaborKernelGenerator

getLambdaPerceptual() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

getLambdaReconstruction() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

getLambdaSegmentation() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

getLandmarkWeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

getLanguage() - Method in class org.hkijena.jipipe.plugins.clij2.parameters.OpenCLKernelScript

getLanguage() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptParameter

The language info.

getLanguage() - Method in class org.hkijena.jipipe.plugins.parameters.library.scripts.ImageJMacro

getLanguage() - Method in class org.hkijena.jipipe.plugins.parameters.library.scripts.PythonScript

getLanguage() - Method in class org.hkijena.jipipe.plugins.r.parameters.RScriptParameter

getLanguageName() - Method in class org.hkijena.jipipe.plugins.clij2.parameters.OpenCLKernelScript

getLanguageName() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptParameter

Returns the human-readable name of the language

getLanguageName() - Method in class org.hkijena.jipipe.plugins.parameters.library.scripts.ImageJMacro

getLanguageName() - Method in class org.hkijena.jipipe.plugins.parameters.library.scripts.PythonScript

getLanguageName() - Method in class org.hkijena.jipipe.plugins.r.parameters.RScriptParameter

getLanguages() - Method in class org.hkijena.jipipe.plugins.ijocr.nodes.TesseractOCRAlgorithm

getLargerMajor() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.connections.JIPipeDesktopRectangularLine

getLargerMinor() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.connections.JIPipeDesktopRectangularLine

getLastConfiguredArtifact() - Method in class org.hkijena.jipipe.api.environments.JIPipeArtifactEnvironment

getLastDataDirectory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

getLastDateTimeInfo() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupSessionInfo

getLastDirectoryBy(JIPipeWorkbench, JIPipeFileChooserApplicationSettings.LastDirectoryKey) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

Gets the last directory by key

getLastExternalDirectory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

getLastFillRect() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

getLastIndex() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

getLastInputSlot() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the last input slot according to the slot order.

GetLastItemFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

GetLastItemFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.GetLastItemFunction

getLastModifiedTime() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotateWithPathProperties

getLastMousePosition() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getLastName() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

getLastOutputSlot() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the last output slot according to the slot order.

getLastParametersDirectory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

getLastProjectsDirectory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

GetLastSummarizingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.integrating

Implements calculating the sum

GetLastSummarizingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.integrating.GetLastSummarizingColumnOperation

getLayers() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.BlendImagesAlgorithm

getLearningRate() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

getLearningRate() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2TrainingTweaksSettings

getLearningRate() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

getLearningRate() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTrainingTweaksSettings

getLearningRate() - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeTrainingTweaksSettings

getLeft() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.OperationNode

getLeft() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

getLeft() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.InnerMargin

getLeft() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

getLeftPanelWidth() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

getLeftPanelWidth() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.State

getLeftSplitPaneRatio() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.State

getLegacyImageViewer() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ImagePlusDataViewer

getLegacyImageViewerPlugins() - Method in class org.hkijena.jipipe.plugins.ij3d.viewers.ROI3DListDataViewer

getLegacyImageViewerPlugins() - Method in class org.hkijena.jipipe.plugins.ijfilaments.viewers.Filaments3DGraphDataViewer

getLegacyImageViewerPlugins() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.viewers.TracksSpotsDataViewer

getLegacyImageViewerPlugins() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ImagePlusDataViewer

getLegacyJIPipeUserDir() - Static method in class org.hkijena.jipipe.utils.PathUtils

Gets the legacy user directory.

getLegacySearch() - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase

getLegacyStoragePath() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

getLegendFontSize() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

getLegendItem(int, int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Returns a legend item for a series.

getLengthRange() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

getLevel() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry

getLibraryDirectory() - Method in class org.hkijena.jipipe.plugins.python.PythonPackageLibraryEnvironment

getLicense() - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

getLicense() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

getLicense() - Method in class org.hkijena.jipipe.plugins.JIPipePrepackagedDefaultJavaPlugin

getLightnessThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

getLimit() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

getLimit() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

getLimit() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

getLimit() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings

getLimit() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm.IterationStepGenerationSettings

getLimit() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithmIterationStepGenerationSettings

getLimit() - Method in class org.hkijena.jipipe.plugins.tables.nodes.filter.SliceTableRowsAlgorithm

getLimit() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.SelectDataTableRowsAlgorithm

getLimitConnections() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

getLimitConnections() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

getLimitConnectionsLengthSortOrder() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

getLineColor() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode

getLineColor() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertTracksToRoiNode

getLineColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualLocationROIProperties

getLineColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualROIProperties

getLineColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

getLineColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

getLineColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

getLineColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

getLineColor() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

getLineColorAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

getLineCommentStartAndEnd(int) - Method in class org.hkijena.jipipe.plugins.r.ui.RTokenMaker

getLineDimension() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData

getLineLength() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm

getLineMeasurement() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm

getLines(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines

getLines(int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines

Once points have been added in some way this method extracts the lines and returns them as a Vector of HoughLine objects, which can be used to draw on the

getLineSize() - Method in class org.hkijena.jipipe.utils.ui.RoundedLineBorder

getLineThickness() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ArrowAnnotationGraphNode

getLineThickness() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm

getLineThickness() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm

getLineThickness() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.LineCategoryJFreeChartPlotData

getLineThickness() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.LineStatisticalCategoryJFreeChartPlotData

getLineThickness() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.LineXYJFreeChartPlotData

getLineWidth() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode

getLineWidth() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertTracksToRoiNode

getLineWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualLocationROIProperties

getLineWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualROIProperties

getLineWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

getLineWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

getLineWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

getLineWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

getLineWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

getLineWidth() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

getLineWidthAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

getLinkedPath() - Method in class org.hkijena.jipipe.plugins.ilastik.datatypes.IlastikModelData

getListCellRendererComponent(JList<? extends JIPipeGraphNode>, JIPipeGraphNode, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.bookmarks.JIPipeDesktopBookmarkedNodeListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeDataSlot>, JIPipeDataSlot, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.cache.renderers.JIPipeDesktopCachedOutputDataSlotListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeNodeDatabaseEntry>, JIPipeNodeDatabaseEntry, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodePanelEntryListCellRenderer

getListCellRendererComponent(JList<?>, Object, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI.NavigationRenderer

getListCellRendererComponent(JList<? extends JIPipeDataSlot>, JIPipeDataSlot, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.properties.JIPipeDesktopDataSlotListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeNodeDatabaseEntry>, JIPipeNodeDatabaseEntry, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.nodefinder.JIPipeDesktopNodeFinderDatasetListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeHistoryJournalSnapshot>, JIPipeHistoryJournalSnapshot, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.history.JIPipeDesktopHistorySnapshotListCellRenderer

getListCellRendererComponent(JList<? extends TableColumnData>, TableColumnData, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotDataSeriesColumnListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeDesktopArtifactManagerUI.ArtifactEntry>, JIPipeDesktopArtifactManagerUI.ArtifactEntry, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.plugins.artifactsmanager.JIPipeDesktopArtifactManagerUI.ArtifactEntryListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeDesktopPluginManagerUI.PluginEntry>, JIPipeDesktopPluginManagerUI.PluginEntry, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.plugins.pluginsmanager.JIPipeDesktopPluginManagerUI.PluginEntryListCellRenderer

getListCellRendererComponent(JList<?>, Object, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunNextWindow.RunOptionListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeRunnableLogEntry>, JIPipeRunnableLogEntry, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopLogViewer.LogEntryRenderer

getListCellRendererComponent(JList<? extends JIPipeProjectRunSet>, JIPipeProjectRunSet, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopRunSetListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeRuntimePartition>, JIPipeRuntimePartition, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopRuntimePartitionListCellRenderer

getListCellRendererComponent(JList<? extends FileNameExtensionFilter>, FileNameExtensionFilter, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.FileNameExtensionsFilterListCellRenderer

getListCellRendererComponent(JList<?>, Object, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterKeyPickerUI.NodeListCellRenderer

getListCellRendererComponent(JList<? extends Path>, Path, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopRecentProjectListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeDesktopDynamicParameterEditorDialog.ParameterEntry>, JIPipeDesktopDynamicParameterEditorDialog.ParameterEntry, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.parameters.JIPipeDesktopDynamicParameterEditorDialog.ParameterEntryListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeDataInfo>, JIPipeDataInfo, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.Renderer

getListCellRendererComponent(JList<? extends JIPipeNodeInfo>, JIPipeNodeInfo, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.Renderer

getListCellRendererComponent(JList<? extends JIPipeGraphNode>, JIPipeGraphNode, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopAlgorithmListCellRenderer

getListCellRendererComponent(JList<? extends T>, T, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopComponentListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeDataInfo>, JIPipeDataInfo, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopDataInfoListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeDataInfoRef>, JIPipeDataInfoRef, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopDataInfoRefListCellRenderer

getListCellRendererComponent(JList<? extends T>, T, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopGenericListCellRenderer

getListCellRendererComponent(JList<? extends ImageJDataExporter>, ImageJDataExporter, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopImageJDataExporterListCellRenderer

getListCellRendererComponent(JList<? extends ImageJDataImporter>, ImageJDataImporter, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopImageJDataImporterListCellRenderer

getListCellRendererComponent(JList<? extends Map.Entry<JIPipeDataInfo, JIPipeDataInfo>>, Map.Entry<JIPipeDataInfo, JIPipeDataInfo>, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopInheritanceConversionListCellRenderer

getListCellRendererComponent(JList<? extends String>, String, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopInheritedSlotListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeNodeDatabaseEntry>, JIPipeNodeDatabaseEntry, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopNodeDatabaseEntryListCellRenderer

getListCellRendererComponent(JList<? extends Path>, Path, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopPathListCellRenderer

getListCellRendererComponent(JList<? extends String>, String, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopPrefixedIconListCellRenderer

getListCellRendererComponent(JList<? extends ResultsTableData>, ResultsTableData, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopResultsTableDataListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeProjectTemplate>, JIPipeProjectTemplate, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopTemplateProjectListCellRenderer

getListCellRendererComponent(JList<? extends T>, T, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopWindowListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeNodeInfo>, JIPipeNodeInfo, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeNodeInfoListCellRenderer

getListCellRendererComponent(JList<? extends Object>, Object, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeNodeInfoOrExamplesListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeParameterTypeInfo>, JIPipeParameterTypeInfo, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeParameterTypeInfoListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeDesktopTabPane.DocumentTab>, JIPipeDesktopTabPane.DocumentTab, int, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeExpressionRegistry.ExpressionFunctionEntry>, JIPipeExpressionRegistry.ExpressionFunctionEntry, int, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.expressions.FunctionSelectorList.ExpressionFunctionRenderer

getListCellRendererComponent(JList<? extends ExpressionOperatorEntry>, ExpressionOperatorEntry, int, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.expressions.OperatorSelectorList.ExpressionOperatorRenderer

getListCellRendererComponent(JList<?>, Object, int, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderUI.EntryRenderer

getListCellRendererComponent(JList<? extends JIPipeExpressionParameterVariableInfo>, JIPipeExpressionParameterVariableInfo, int, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.expressions.VariableSelectorList.ExpressionVariableRenderer

getListCellRendererComponent(JList<? extends ROI3D>, ROI3D, int, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROI3DListCellRenderer

getListCellRendererComponent(JList<? extends Filaments3DGraphData>, Filaments3DGraphData, int, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentListCellRenderer

getListCellRendererComponent(JList<? extends Spot>, Spot, int, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotListCellRenderer

getListCellRendererComponent(JList<? extends Integer>, Integer, int, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TrackListCellRenderer

getListCellRendererComponent(JList<? extends Roi>, Roi, int, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.RoiListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeNodeExample>, JIPipeNodeExample, int, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.nodeexamples.JIPipeNodeExampleListCellRenderer

getListCellRendererComponent(JList<? extends JIPipeNodeTemplate>, JIPipeNodeTemplate, int, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.nodetemplate.JIPipeNodeTemplateListCellRenderer

getListCellRendererComponent(JList<? extends T>, T, int, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicEnumDesktopParameterEditorUI.Renderer

getListCellRendererComponent(JList<?>, Object, int, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.EnumDesktopParameterEditorUI.Renderer

getListCellRendererComponent(JList<? extends Boolean>, Boolean, int, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanDesktopParameterEditorUI.BooleanComboBoxItemRenderer

getLoadingImageIcon() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Returns the icon to use while in the process of loading the image.

getLoadsSynchronously() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Returns true if the image should be loaded when first asked for.

getLocalBackground() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.ConstantSpotSegmentation3DAlgorithm

getLocalDataTable() - Method in class org.hkijena.jipipe.api.data.browser.JIPipeLocalDataTableBrowser

getLocalDataTableInfo() - Method in class org.hkijena.jipipe.api.data.browser.JIPipeLocalDataTableBrowser

getLocalPath() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeLocalArtifact

getLocalRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

getLocalSystemRepositoryPath() - Method in class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry

JIPipe's system repository path, which is usually located in IMAGEJ_DIR/jipipe/artifacts This repository is intended for distributors of JIPipe to provide artifacts with JIPipe Can be overwritten by setting the JIPIPE_SYSTEM_REPOSITORY_PATH

getLocalUserRepositoryPath() - Method in class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry

The path to the local repository that is owned by the user.

getLocalWindowHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression

getLocalWindowSigma() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJStructureTensorParameters

getLocalWindowWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression

getLocation(String, String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot

getLocation(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Returns info about the location of this data table.

getLocation(String, String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Returns info about the location of this data table.

getLocation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

getLocation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

getLocation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

getLocation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

getLocation() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

getLocationCAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

getLocationInfo() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

getLocationInfos() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewCompartmentNodeDatabaseEntry

getLocationInfos() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

getLocationInfos() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

getLocationInfos() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

getLocationInfos() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

getLocationInfos() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

getLocationInfos() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry

getLocationMergingFunction() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.SmoothFilamentsAlgorithm

getLocations() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm

getLocations() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.State

getLocationTAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

getLocationXAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

getLocationYAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

getLocationZAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

getLockType() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryApplyInstallUninstallRun

getLockType() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryInstallArtifactRun

getLockType() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryInstallManuallyRun

getLockType() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryOperationRun

getLockType() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryUninstallArtifactRun

getLockType() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryUpdateCachedArtifactsRun

getLog() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

getLog() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableLogEntry

getLogClearedEventEmitter() - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection

getLogEntries() - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection

getLogEntryAddedEventEmitter() - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection

getLogFile() - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROToJIPipeLogger

getLogicalOperation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.BitwiseLogicalOperationAlgorithm

getLogInterval() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfoETA

Gets the log interval (milliseconds)

getLogLimit() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

getLogo() - Method in interface org.hkijena.jipipe.JIPipeJavaPlugin

Deprecated.

getLogo() - Method in class org.hkijena.jipipe.plugins.JIPipePrepackagedDefaultJavaPlugin

getLogo() - Static method in class org.hkijena.jipipe.utils.UIUtils

getLogo400() - Static method in class org.hkijena.jipipe.utils.UIUtils

getLogPanel() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorRunManager

getLogPanel() - Method in class org.hkijena.jipipe.desktop.app.settings.project.JIPipeDesktopProjectOverviewRunManager

getLogPrepend() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

getLogs() - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection.LogClearedEvent

getLogs() - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection.LogEntryAddedEvent

getLogs() - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection.LogUpdatedEvent

getLogService() - Method in class org.hkijena.jipipe.JIPipe

getLogUpdatedEventEmitter() - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection

getLoopEndNodes() - Method in class org.hkijena.jipipe.api.looping.LoopGroup

getLoopIterationIteratingSettings() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

getLoopIterationMergingSettings() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

getLoopStartNode() - Method in class org.hkijena.jipipe.api.looping.LoopGroup

getLowerThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

getLowThreshold() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.HysteresisSegmentation3DAlgorithm

getLowThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm

getLUT() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerLUTEditor

getLUT() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerOpacityLUTEditor

getMacroParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.MacroWrapperAlgorithm

getMagnification() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SpotsToRGBNode

getMagnification() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.TracksToRGBNode

getMagnification() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

getMagnification() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

getMainOperation(Class<? extends JIPipeData>) - Static method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopDataTableRowDisplayUtil

getMainOperation() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopDataTableRowDisplayUtil

getMainOperation(Class<? extends JIPipeData>) - Static method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopDefaultResultDataSlotRowUI

getMaintainer() - Method in class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency

getMandatoryDirectoriesMap(Path) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectDirectories

Gets a map of user-defined directories that must exist

getManifestAttributes() - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

getManualOrder() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.SortTableColumnsAlgorithm

getMapFillColor() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ColorRoi3DByNameAlgorithm

getMapFillColor() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ColorRoi3DByStatisticsAlgorithm

getMapFillColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByNameAlgorithm

getMapFillColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm

getMapFillColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm

Deprecated.

getMapFillColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2

getMapImage() - Method in enum org.hkijena.jipipe.plugins.parameters.library.colors.ColorMap

GetMapKeysFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

GetMapKeysFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.GetMapKeysFunction

getMapLineColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByNameAlgorithm

getMapLineColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm

getMapLineColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm

Deprecated.

getMapLineColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2

GetMapValuesFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

GetMapValuesFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.GetMapValuesFunction

getMarginBottom() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters

getMarginBottom() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

getMarginBottom() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm

getMarginLeft() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters

getMarginLeft() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

getMarginLeft() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm

getMarginRight() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters

getMarginRight() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

getMarginRight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm

getMarginTop() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters

getMarginTop() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

getMarginTop() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm

getMarkdown() - Method in class org.hkijena.jipipe.plugins.parameters.library.markup.MarkdownText

getMask() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ThresholdingResult

getMask(JIPipeSingleIterationStep, ImageSliceIndex, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.MergeImagesAlgorithm

getMask(ImagePlus, ROI2DListData, ImagePlus) - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.ImageROITargetArea

Gets the appropriate mask for the current setting

getMask(JIPipeSingleIterationStep, ImageSliceIndex, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.SimpleImageAndRoiIteratingAlgorithm

getMask() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegMask

Return the full-size mask array.

getMask() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

getMaskChangedEventEmitter() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

getMaskColor() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

getMaskDrawerPlugin() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawer2DTool

getMaskedPixels_16U(ImageProcessor, ImageProcessor, TShortArrayList) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

getMaskedPixels_32F(ImageProcessor, ImageProcessor, TFloatArrayList) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

getMaskedPixels_8U(ImageProcessor, ImageProcessor, TByteArrayList) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

getMaskedPixels_Slow(ImageProcessor, ImageProcessor, List<Float>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

getMaskForSlice(int, int, boolean, boolean, int, ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Generates a mask image from pure ROI data.

getMaskFromMaskOrROI(ImageROITargetArea, JIPipeSingleIterationStep, String, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageJAlgorithmUtils

getMaskGenerator() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

getMaskInfos() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.CustomColoc2

getMaskProcessorFromMaskOrROI(ImageROITargetArea, int, int, ROI2DListData, ImagePlus, ImageSliceIndex) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageJAlgorithmUtils

getMaskProcessorFromMaskOrROI(ImageROITargetArea, JIPipeSingleIterationStep, ImageSliceIndex, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageJAlgorithmUtils

getMaskThreshold() - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationThresholdSettings

getMatrix() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve.ConvolveByParameter2DAlgorithm

getMatrix() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.ImageFromMatrix2DAlgorithm

getMax() - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.FloatNumberRangeParameter

getMax() - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.IntNumberRangeParameter

getMax() - Method in enum org.hkijena.jipipe.utils.ImageJCalibrationMode

getMaxBlueThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

getMaxBlueYellowThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

getMaxBrightnessThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

getMaxCounter() - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm

getMaxDistance() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm

getMaxDistance() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm

getMaxDistance() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm

getMaxDistanceMetadataKey() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FindLinearFilamentVertexOrderAlgorithm

getMaxDownsampling() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseSettings

getMaxEdgeWidth() - Method in class org.hkijena.jipipe.plugins.pipelinerender.RenderPipelineRunSettings

getMaxEntries() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeHistoryJournalApplicationSettings

getMaxEpsilon() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationParameters

getMaxGreenRedThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

getMaxGreenThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

getMaxHueThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

getMaximumBarWidth() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Returns the maximum bar width as a percentage of the available drawing space.

getMaximumCudaVersion() - Static method in class org.hkijena.jipipe.utils.CUDAUtils

Get the maximum CUDA version supported by the installed driver.

getMaximumForeground() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXInitializationParameters

getMaximumIterations() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXConvergenceParameters

getMaximumLength() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SubdivideFilamentEdges

getMaximumNumIterations() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SubdivideFilamentEdges

getMaximumScale() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.FrangiVesselnessFeatures

getMaxInputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

getMaxIterations() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm.ClusteringSettings

getMaxIterations() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm.ClusteringSettings

getMaxIterations() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm.ClusteringSettings

getMaxLength() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

getMaxLightnessThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

getMaxMemory() - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

getMaxNumber() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.NumberRangeParameterGenerator

getMaxNumber() - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.FloatNumberRangeParameter

getMaxNumber() - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.IntNumberRangeParameter

getMaxNumber() - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeParameter

getMaxNumCircles() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

getMaxOutputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

getMaxParticleCircularity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

getMaxParticleSize() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

getMaxParticleSize() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm

getMaxParticleSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

getMaxParticleSphericity() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

getMaxParticleSphericity() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm

getMaxProgress() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

getMaxProgress() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo.StatusUpdatedEvent

getMaxRadius() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.binary.Voronoi3DAlgorithm

getMaxRadius() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.GaussianFitSpotSegmentation3DAlgorithm

getMaxRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

getMaxRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.FastCircularHoughSegmentation2DAlgorithm

getMaxRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.DilateLabelsAlgorithm

getMaxRadiusInUnit(String) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

Converts the radius into units and returns the maximum value

getMaxRedThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

getMaxSaturationThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

getMaxScaleDeformation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

getMaxSelectableValue() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl

getMaxSeriesIdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm

getMaxSigma() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature2DSettings

getMaxSigma() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature3DSettings

getMaxSlope() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer

getMaxTableColumnSize() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

getMaxTheta() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LinesHoughDetection2DAlgorithm

getMaxThreads() - Method in class org.hkijena.jipipe.api.JIPipeFixedThreadPool

getMaxThreads() - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

getMaxThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm

getMaxThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm

getMaxThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm

getMaxThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm

getMaxThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ThresholdByAnnotation2DAlgorithm

getMaxThresholdParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm

getMaxThresholdParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm

getMaxThresholdParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm

getMaxVolumePixels() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

getMaxVolumePixels() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm

getMeanColumnName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator

getMeanDiameter() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationModelSettings_Old

Deprecated.

getMeasurements() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm

getMeasurements() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm

getMeasurements() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DStatisticsAlgorithm

getMeasurements() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

getMeasurements() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm

getMeasurements() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ExtractLabelStatisticsAlgorithm

getMeasurements() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm

getMeasurements() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.OverlapMeasureLabelsAlgorithm

getMeasurements() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm

getMeasurements() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm

getMeasurements() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm

getMeasurements() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm

getMeasurements() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

getMeasurements() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.EnlargeShrinkRoiAlgorithm

getMeasurements() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm

getMeasurements() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm

getMeasurements() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

getMeasurements() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

getMembershipPrefix() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm.OutputSettings

getMembranePatchSize() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature2DSettings

getMembranePatchSize() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature3DSettings

getMembraneSize() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature2DSettings

getMembraneSize() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature3DSettings

getMenuBar() - Method in class org.hkijena.jipipe.utils.MenuManager

getMenuDataSourcesFor(Class<? extends T>) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Returns data source algorithms that can generate the specified data type Adheres to the data source menu location

getMenuDisabledForeground() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

Returns the menu disabled foreground color.

getMenuDisabledForeground() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

Returns the menu disabled foreground color.

getMenuExtensionsTargeting(JIPipeMenuExtensionTarget, JIPipeWorkbench) - Method in class org.hkijena.jipipe.desktop.api.registries.JIPipeCustomMenuRegistry

Gets all extensions for a specific menu

getMenuItem(JComponent, int) - Static method in class org.hkijena.jipipe.utils.UIUtils

getMenuItemCount(JComponent) - Static method in class org.hkijena.jipipe.utils.UIUtils

getMenuPath() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo

getMenuPath() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

getMenuPath() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

getMenuPath() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo

getMenuPath() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

getMenuPath() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

Gets the menu path of this algorithm

getMenuPath() - Method in class org.hkijena.jipipe.api.nodes.JIPipeNodeMenuLocation

getMenuPath() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopMenuExtension

getMenuPath() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

getMenuPath() - Method in class org.hkijena.jipipe.plugins.clij2.ui.CLIJControlPanelJIPipeDesktopMenuExtension

getMenuPath() - Method in class org.hkijena.jipipe.plugins.dev.ExportNodeJsonsTool

getMenuPath() - Method in class org.hkijena.jipipe.plugins.dev.ExportNodeParameterJsonsTool

getMenuPath() - Method in class org.hkijena.jipipe.plugins.dev.ExportNodeSignatureJsonsTool

getMenuPath() - Method in class org.hkijena.jipipe.plugins.dev.TriggerBackupAllTool

getMenuPath() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo

getMenuPath() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo

getMenuPath() - Method in class org.hkijena.jipipe.plugins.ilastik.RunIlastikDesktopMenuExtension

getMenuPath() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

getMenuPath() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.tools.BioFormatsConfigTool

getMenuPath() - Method in class org.hkijena.jipipe.plugins.napari.RunNapariDesktopMenuExtension

getMenuPath() - Method in class org.hkijena.jipipe.plugins.parameters.ExpressionTesterJIPipeDesktopMenuExtension

getMenuPath() - Method in class org.hkijena.jipipe.plugins.parameters.ParameterTesterJIPipeDesktopMenuExtension

getMenuPath() - Method in class org.hkijena.jipipe.plugins.pipelinerender.PipelineRenderTool

getMenuPath() - Method in class org.hkijena.jipipe.plugins.plots.NewPlotJIPipeDesktopMenuExtension

getMenuPath() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2AlgorithmInfo

getMenuPath() - Method in class org.hkijena.jipipe.plugins.tables.NewTableJIPipeDesktopMenuExtension

getMenuPath() - Method in class org.hkijena.jipipe.plugins.tools.CloseAllImageJWindowsTool

getMenuPath() - Method in class org.hkijena.jipipe.plugins.tools.CreateLaunchersTool

getMenuPath() - Method in class org.hkijena.jipipe.plugins.tools.DissolveCompartmentsTool

getMenuPath() - Method in class org.hkijena.jipipe.plugins.tools.OpenImageJConsoleTool

getMenuPath() - Method in class org.hkijena.jipipe.plugins.tools.OpenImageJTool

getMenuPath() - Method in class org.hkijena.jipipe.plugins.tools.OpenImageJUpdateManagerTool

getMenuPath() - Method in class org.hkijena.jipipe.plugins.tools.RebuildAliasIdsTool

getMenuPath() - Method in class org.hkijena.jipipe.plugins.tools.RestartJIPipeDesktopTool

getMenuPathList() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

getMenuPathOf(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData

Returns the menu path of the data type

getMenuPathOf(Class<? extends JIPipeGraphNode>) - Static method in class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo

Returns the menu path of the algorithm

getMenuTarget() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopMenuExtension

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.clij2.ui.CLIJControlPanelJIPipeDesktopMenuExtension

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.dev.ExportNodeJsonsTool

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.dev.ExportNodeParameterJsonsTool

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.dev.ExportNodeSignatureJsonsTool

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.dev.TriggerBackupAllTool

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.ilastik.RunIlastikDesktopMenuExtension

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.tools.BioFormatsConfigTool

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.napari.RunNapariDesktopMenuExtension

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.parameters.ExpressionTesterJIPipeDesktopMenuExtension

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.parameters.ParameterTesterJIPipeDesktopMenuExtension

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.pipelinerender.PipelineRenderTool

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.plots.NewPlotJIPipeDesktopMenuExtension

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.tables.NewTableJIPipeDesktopMenuExtension

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.tools.CloseAllImageJWindowsTool

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.tools.CreateLaunchersTool

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.tools.DissolveCompartmentsTool

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.tools.OpenImageJConsoleTool

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.tools.OpenImageJTool

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.tools.OpenImageJUpdateManagerTool

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.tools.RebuildAliasIdsTool

getMenuTarget() - Method in class org.hkijena.jipipe.plugins.tools.RestartJIPipeDesktopTool

getMergedColumn(Set<String>, String, String) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Returns a column that contains all values of the selected columns

getMergedDataAnnotation(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Returns a merged annotation

getMergedDataAnnotation(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Returns a merged annotation

getMergedDataAnnotations() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets the list of annotations.

getMergedDataAnnotations() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Gets the list of annotations.

getMergedTextAnnotation(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Returns a merged annotation

getMergedTextAnnotation(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Returns a merged annotation

getMergedTextAnnotations() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Gets the list of annotations.

getMergedTextAnnotations() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Gets the list of annotations.

getMergeMode() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByProjectPaths

getMergeMode() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.OverwriteAnnotations

getMergeMode() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.AnnotateWithDataTableProperties

getMergeStrategy() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.ExtractTableAlgorithm

getMeshColor() - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.MaskTo3DMeshAlgorithm

getMeshLengthUnit() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm

getMeshLengthUnit() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

getMeshLengthUnit() - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.MaskTo3DMeshAlgorithm

getMeshName() - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.MaskTo3DMeshAlgorithm

getMeshNamePrefix() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm

getMeshNamePrefix() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

getMessage() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo.StatusUpdatedEvent

getMetadata() - Method in class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment

getMetadata() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

getMetadata() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectTemplate

getMetadata() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

getMetadata() - Method in interface org.hkijena.jipipe.JIPipeDependency

getMetadata() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

getMetadata() - Method in class org.hkijena.jipipe.JIPipeMutableDependency

getMetadata() - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData

getMetadata() - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData

getMetadata() - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

getMetadata() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesExpressionAlgorithm

getMetadata() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesManuallyAlgorithm

getMetadata() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

getMetadata() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

getMetadata() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm.NewEdgesSettings

getMetadata() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentEdge

getMetadata() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

getMetadata() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.OMEImageData

getMetadata() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

Gets the metadata for this plot instance.

getMetadataEntries() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

getMetadataEntries() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

getMetadataFacility() - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROGateway

getMetadataGenerators() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm

getMetadataKey() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetFilamentMetadataToComponentIndexAlgorithm

getMetadataKey() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexMetadataFromImageAlgorithm

getMetadataName() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry

getMetadataName() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm.MetadataEntry

getMetadataRegistry() - Method in class org.hkijena.jipipe.JIPipe

getMetadataRegistry() - Method in interface org.hkijena.jipipe.JIPipeService

getMetadataValue() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry

getMetadataValue() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm.MetadataEntry

getMethod() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeContextActionWrapperUIContextAction

getMethod() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm

getMethod() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm

getMethod() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm

getMethod() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm

getMethod() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm

getMethod() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking.SetToContentAwareAlgorithm

getMethod() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm

getMethod() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm

getMethod() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OMEAccessorTemplate

getMethod() - Method in class org.hkijena.jipipe.plugins.opencv.nodes.InpaintingAlgorithm

getMimeType() - Method in class org.hkijena.jipipe.plugins.clij2.parameters.OpenCLKernelScript

getMimeType() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptParameter

Returns the MIME type of this script

getMimeType() - Method in class org.hkijena.jipipe.plugins.parameters.library.scripts.ImageJMacro

getMimeType() - Method in class org.hkijena.jipipe.plugins.parameters.library.scripts.PythonScript

getMimeType() - Method in class org.hkijena.jipipe.plugins.r.parameters.RScriptParameter

getMimeType() - Method in class org.hkijena.jipipe.plugins.strings.JsonData

getMimeType() - Method in class org.hkijena.jipipe.plugins.strings.StringData

Returns the MIME type of the string

getMimeType() - Method in class org.hkijena.jipipe.plugins.strings.XMLData

getMin() - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.FloatNumberRangeParameter

getMin() - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.IntNumberRangeParameter

getMin() - Method in enum org.hkijena.jipipe.utils.ImageJCalibrationMode

getMinBlueThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

getMinBlueYellowThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

getMinBrightnessThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

getMinContrastExp() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

getMinCounter() - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm

getMinGreenRedThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

getMinGreenThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

getMinHeight() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode

getMinHueThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

getMinimumAngleForSOACLinking() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

getMinimumBackgroundWidth() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

getMinimumCudaVersion() - Static method in class org.hkijena.jipipe.utils.CUDAUtils

Get the minimum CUDA version supported based on GPU compute capability.

getMinimumForeground() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXInitializationParameters

getMinimumNumberOfPixels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm

getMinimumPanelWidth() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

getMinimumScale() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.FrangiVesselnessFeatures

getMinimumSize() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanelImageComponent

getMinimumSnakeLength() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXConvergenceParameters

getMinimumValue() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm

getMinInlierRatio() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationParameters

getMinLength() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

getMinLength() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

getMinLength() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

getMinLevel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

getMinLightnessThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

getMinMaxByDialog(Component, String, String, double, double, double, double) - Static method in class org.hkijena.jipipe.utils.UIUtils

Gets an integer by dialog

getMinNumber() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.NumberRangeParameterGenerator

getMinNumber() - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.FloatNumberRangeParameter

getMinNumber() - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.IntNumberRangeParameter

getMinNumber() - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeParameter

getMinNumCircles() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

getMinNumPoints() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm

getMinParticleCircularity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

getMinParticleSize() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

getMinParticleSize() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm

getMinParticleSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

getMinParticleSphericity() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

getMinParticleSphericity() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm

getMinPixels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.VolumeOpening2DAlgorithm

getMinPixels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.VolumeOpening3DAlgorithm

getMinRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

getMinRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.FastCircularHoughSegmentation2DAlgorithm

getMinRedThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

getMinSaturationThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

getMinScaleDeformation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

getMinScore() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.FastCircularHoughSegmentation2DAlgorithm

getMinSelectableValue() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl

getMinSigma() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature2DSettings

getMinSigma() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature3DSettings

getMinSize() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationThresholdSettings_Old

Deprecated.

getMinSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.AdvancedTurboRegParameters

getMinThickness() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm

getMinThreshold() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.FindMaxima3DAlgorithm

getMinThreshold() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

getMinThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm

getMinThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm

getMinThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm

getMinThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm

getMinThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ThresholdByAnnotation2DAlgorithm

getMinThresholdParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm

getMinThresholdParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm

getMinThresholdParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm

getMinTrainMasks() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

getMinTrainMasks() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2TrainingTweaksSettings

getMinTrainMasks() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTrainingTweaksSettings

getMinTrainMasks() - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeTrainingTweaksSettings

getMinVolumePixels() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

getMinVolumePixels() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm

getMinVoxelNumber() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm

getMinWidth() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode

getMissingImageJSites() - Method in class org.hkijena.jipipe.JIPipeRegistryIssues

getMissingValue() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.RestoreVertexValueBackupAlgorithm

getMissingValueReplacement() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm

getMode() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopImageFrameComponent

getMode() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

getMode() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker

getMode() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker

getMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm

getMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalFeatureContrast2DAlgorithm

getMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm

getMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

getMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

getMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm

getMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromExpressionsAlgorithm

getMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromRoiAlgorithm

getMode() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl

getMode() - Method in class org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtraction

getMode() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.StringOrDouble

getModel() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

getModel() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationModelSettings_Old

Deprecated.

getModel() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.ModelData

getModel() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

getModelChangedEventEmitter() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

getModelNameAnnotation() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.ImportPretrainedCellpose2ModelAlgorithm

getModelNameAnnotation() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.ImportPretrainedCellpose3DenoiseModelAlgorithm

getModelNameAnnotation() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.ImportPretrainedCellpose3SegmentationModelAlgorithm

getModelNameAnnotation() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.ImportPretrainedOmnipose0ModelAlgorithm

getModelNameOrPath() - Method in class org.hkijena.jipipe.plugins.cellpose.utils.CellposeModelInfo

getModelParameters() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

getModels() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.ImportPretrainedCellpose2ModelAlgorithm

getModels() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.ImportPretrainedCellpose3DenoiseModelAlgorithm

getModels() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.ImportPretrainedCellpose3SegmentationModelAlgorithm

getModels() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.ImportPretrainedOmnipose0ModelAlgorithm

getModifiedEventEmitter() - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache

getModifiedEventEmitter() - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache

getModifiedEventEmitter() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectRunSetsConfiguration

getModifier() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm

getModifier() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.ByteArrayParameterImageJ2ModuleInput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.DoubleArrayParameterImageJ2ModuleInput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.FloatArrayParameterImageJ2ModuleInput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.IntegerArrayParameterImageJ2ModuleInput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.LongArrayParameterImageJ2ModuleInput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.ShortArrayParameterImageJ2ModuleInput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.StringArrayParameterImageJ2ModuleInput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.ParameterImageJ2ModuleInput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.BooleanParameterImageJ2ModuleInput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.ByteParameterImageJ2ModuleInput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.DoubleParameterImageJ2ModuleInput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.FloatParameterImageJ2ModuleInput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.IntegerParameterImageJ2ModuleInput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.LongParameterImageJ2ModuleInput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.ShortParameterImageJ2ModuleInput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.StringParameterImageJ2ModuleInput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.RealTypeParameterImageJ2ModuleInput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.BooleanParameterImageJ2ModuleOutput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.ByteParameterImageJ2ModuleOutput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.DoubleParameterImageJ2ModuleOutput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.FloatParameterImageJ2ModuleOutput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.IntegerParameterImageJ2ModuleOutput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.LongParameterImageJ2ModuleOutput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.ShortParameterImageJ2ModuleOutput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.StringParameterImageJ2ModuleOutput

getModuleClass() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.RealTypeParameterImageJ2ModuleOutput

getModuleDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.DatasetImageJ2ModuleInput

getModuleDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.DataSlotModuleInput

getModuleDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.ImagePlusImageJ2ModuleInput

getModuleDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.IntervalImageJ2ModuleInput

getModuleDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.IterableImageJ2ModuleInput

getModuleDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.OutOfBoundsFactoryImageJ2ModuleInput

getModuleDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.RandomAccessibleImageJ2ModuleInput

getModuleDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.ShapeImageJ2ModuleInput

getModuleDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.DatasetImageJ2ModuleOutput

getModuleDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.DataSlotModuleOutput

getModuleDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.ImagePlusImageJ2ModuleOutput

getModuleDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.IntervalImageJ2ModuleOutput

getModuleDataType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.RandomAccessibleImageJ2ModuleOutput

getModuleItemParameterAccess(ModuleItem<?>) - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNode

getModuleNodeInfo() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNode

getModuleParameters() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNode

getMontageCreator() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage2

getMontageCreator() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontage2Algorithm

getMouseClickedEventEmitter() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

getMouseDraggedEventEmitter() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

getMouseEnteredEventEmitter() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

getMouseEvent() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.PixelHoverEvent

getMouseExitedEventEmitter() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

getMouseModelPixelCoordinate(MouseEvent, boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

Gets the pixel coordinates inside the shown image under the mouse.

getMouseMovedEventEmitter() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

getMousePressedEventEmitter() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

getMouseReleasedEventEmitter() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

getMovieAnimatedDimension() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImage2Algorithm

getMovieAnimatedDimension() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

getMovieAnimatedDimension() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm

getMovieFPS() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImage2Algorithm

getMovieFPS() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

getMovieFPS() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm

getMultiChannelMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.HistogramGenerator

getMultiColorIndex() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

getMultiColorMax() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

getMultiLineStringByDialog(Component, String, String, String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Gets a multiline string by dialog

getMultiObjectMaximumBoundingBoxOverlap() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

getMultiObjectScoreThreshold() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

getMultiPartOutputName() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

getMultiplier() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.Warp2DAlgorithm

getName() - Method in interface org.hkijena.jipipe.api.annotation.JIPipeAnnotation

getName() - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataAnnotation

getName() - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

getName() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory

getName() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartmentOutput

getName() - Method in class org.hkijena.jipipe.api.compartments.JIPipeCompartmentsPlugin

getName() - Method in interface org.hkijena.jipipe.api.compat.ImageJDataExporter

A documentation name.

getName() - Method in interface org.hkijena.jipipe.api.compat.ImageJDataImporter

A documentation name.

getName() - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters

getName() - Method in class org.hkijena.jipipe.api.compat.ImageJImportParameters

getName() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation

getName() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo

getName() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot

getName() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

getName() - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail

getName() - Method in interface org.hkijena.jipipe.api.data.JIPipeLegacyDataOperation

getName() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataAnnotationInfo

The name of this data annotation

getName() - Method in class org.hkijena.jipipe.api.environments.JIPipeEnvironment

getName() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

getName() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool

getName() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

getName() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool

getName() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

getName() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

getName() - Method in class org.hkijena.jipipe.api.grouping.GroupingPlugin

getName() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

getName(JIPipeParameterTree) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference

Gets the name or custom name

getName() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess

getName() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup

getName() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal.Snapshot

getName() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournalSnapshot

getName() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal.Snapshot

getName() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

getName() - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

getName() - Method in class org.hkijena.jipipe.api.looping.LoopingPlugin

getName() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

getName() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory

getName() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory

getName() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory

getName() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory

getName() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory

getName() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory

getName() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory

getName() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory

getName() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory

getName() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory

getName() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory

getName() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewCompartmentNodeDatabaseEntry

getName() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

getName() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

getName() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

getName() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

getName() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

getName() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry

getName() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo

getName() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

getName() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the algorithm name

getName() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

Returns the algorithm name

getName() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory

The name displayed in menus and other UI

getName() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterTypeInfo

getName() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.UserParameterDefinition

getName() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess

getName() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess

getName() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

getName() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess

Returns the parameter name that is displayed to the user

getName() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterGenerator

getName() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

getName() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterTypeInfo

getName() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

getName() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectDirectories.DirectoryEntry

getName() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ColumnOperationEntry

getName() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ExpressionFunctionEntry

getName() - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry.InstallerEntry

getName() - Method in class org.hkijena.jipipe.api.run.JIPipeProjectRunSet

getName() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableLogEntry

getName() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

getName() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

getName() - Method in interface org.hkijena.jipipe.api.settings.JIPipeSettingsSheet

The name of the settings sheet as displayed in the UI

getName() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

getName() - Method in class org.hkijena.jipipe.desktop.api.nodes.JIPipeDesktopNodeQuickAction

getName() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEvent

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.PinnedDummyNodeTypeCategory

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.TemplatesDummyNodeTypeCategory

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddBookmarkNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewCompartmentUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewParameterSetNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.ClearCacheNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.CollapseIOInterfaceNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DeleteCompartmentUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DeleteNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisablePassThroughNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableSaveOutputsNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableVirtualOutputNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnablePassThroughNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableSaveOutputsNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableVirtualOutputsNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.ExportCompartmentAsJsonNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.GroupNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.InvertSelectionNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.IsolateNodesUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.JsonAlgorithmToGroupNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.LockNodeLocationSizeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.LowerUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIDownContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUILeftContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIRightContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIUpContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeContextActionWrapperUIContextAction

getName() - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.OpenCacheBrowserInWindowUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RaiseUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RemoveBookmarkNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RunAndShowIntermediateResultsNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RunAndShowResultsNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SelectAllNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SelectAndMoveNodeHereNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SendToBackgroundUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SendToForegroundUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UnlockNodeLocationSizeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheOnlyPredecessorsNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheShowIntermediateNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsCopyNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsCutNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsPasteNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphCopyNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphCutNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphDuplicateNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphPasteNodeUIContextAction

getName() - Method in class org.hkijena.jipipe.desktop.app.history.JIPipeDesktopCurrentStateSnapshot

getName() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotSeriesEditor

getName() - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderPackage

getName() - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderRepository

getName() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectDirectoriesSettingsSheetWrapper

getName() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectMetadataSettingsSheetWrapper

getName() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectParametersSettingsSheetWrapper

getName() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectPermissionsSettingsSheetWrapper

getName() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextPathTypeMetadata

getName() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddParameterDialog.Settings

getName() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterKeyPickerUI.ParameterEntry

getName() - Method in class org.hkijena.jipipe.desktop.commons.components.parameters.JIPipeDesktopDynamicParameterEditorDialog.ParameterEntry

getName() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

Return the name of this theme, "Ocean".

getName() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

Return the name of this theme, "Ocean".

getName() - Method in enum org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopUITheme

getName() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

getName() - Method in class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency

getName() - Method in class org.hkijena.jipipe.plugins.annotation.AnnotationsPlugin

getName() - Method in class org.hkijena.jipipe.plugins.artifacts.ArtifactsPlugin

getName() - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.batchassistant.BatchAssistantPlugin

getName() - Method in class org.hkijena.jipipe.plugins.cellpose.Cellpose2PluginApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.cellpose.Cellpose3PluginApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePlugin

getName() - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePluginProjectSettings

getName() - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData.Metadata

getName() - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData.Metadata

getName() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.datatypes.LegacyCellposeModelData

Deprecated.

getName() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.datatypes.LegacyCellposeSizeModelData

Deprecated.

getName() - Method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp2.PretrainedCellpose2SegmentationModel

getName() - Method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp3.PretrainedCellpose3DenoiseModel

getName() - Method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp3.PretrainedCellpose3SegmentationModel

getName() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

getName() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo.OutputTableColumnInfo

getName() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPlugin

getName() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.core.CorePlugin

getName() - Method in class org.hkijena.jipipe.plugins.core.data.CopyContainingFolderDataImportOperation

getName() - Method in class org.hkijena.jipipe.plugins.core.data.DefaultDataDisplayOperation

getName() - Method in class org.hkijena.jipipe.plugins.core.data.OpenContainingFolderDataImportOperation

getName() - Method in class org.hkijena.jipipe.plugins.core.data.OpenInNativeApplicationDataImportOperation

getName() - Method in class org.hkijena.jipipe.plugins.dataenvironment.DataDirectoriesPlugin

getName() - Method in class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironmentApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.dev.DevelopmentPlugin

getName() - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionConstantEntry

getName() - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionOperatorEntry

getName() - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionPlugin

getName() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.VariableNode

getName() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameterVariableInfo

getName() - Method in class org.hkijena.jipipe.plugins.expressions.ParameterInfo

getName() - Method in class org.hkijena.jipipe.plugins.filesystem.compat.PathDataFromTableImageJImporter

getName() - Method in class org.hkijena.jipipe.plugins.filesystem.FilesystemPlugin

getName() - Method in class org.hkijena.jipipe.plugins.filesystem.JIPipeFilesystemPluginApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.filesystem.resultanalysis.CopyPathDataDisplayOperation

getName() - Method in class org.hkijena.jipipe.plugins.filesystem.resultanalysis.OpenPathDataDisplayOperation

getName() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.ParameterFormData

getName() - Method in class org.hkijena.jipipe.plugins.forms.FormsPlugin

getName() - Method in class org.hkijena.jipipe.plugins.graphannotation.GraphAnnotationPlugin

getName() - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

getName() - Method in class org.hkijena.jipipe.plugins.ij3d.display.AddROI3DToManagerDataDisplayOperation

getName() - Method in class org.hkijena.jipipe.plugins.ij3d.IJ3DPlugin

getName() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ImageViewerUIROI3DDisplayApplicationSettings

getName() - Method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurementColumn

getName() - Method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurementColumn

getName() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsNodeTypeCategory

getName() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsPlugin

getName() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.FilamentsPluginProjectSettings

getName() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.ImageViewerUIFilamentDisplayApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.TSOAXApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingPlugin

getName() - Method in class org.hkijena.jipipe.plugins.ijocr.OCRPlugin

getName() - Method in class org.hkijena.jipipe.plugins.ijocr.settings.OCRPluginProjectSettings

getName() - Method in class org.hkijena.jipipe.plugins.ijocr.settings.TesseractOCRApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.trackscheme.ShowTrackSchemeDataDisplayOperation

getName() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo

getName() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo

getName() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUISpotsDisplayApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUITracksDisplayApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.TrackMatePlugin

getName() - Method in class org.hkijena.jipipe.plugins.ijweka.WekaPlugin

getName() - Method in class org.hkijena.jipipe.plugins.ilastik.datatypes.IlastikModelData

getName() - Method in class org.hkijena.jipipe.plugins.ilastik.IlastikPlugin

getName() - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginProjectSettings

getName() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

getName() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2Plugin

getName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.ImageJAlgorithmsPlugin

getName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm.ROINameToLabelEntry

getName() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementColumn

getName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator.GeneratedColumn

getName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OMEAccessorTemplate

getName() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationType

getName() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.ImagePlusDataFromImageWindowImageJImporter

getName() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.AddToROIManagerDataDisplayOperation

getName() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInImageJ3DViewerDataDisplayOperation

getName() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInImageJDataDisplayOperation

getName() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInNapariDataDisplayOperation

getName() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesPlugin

getName() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImportImageJPathDataDisplayOperation

getName() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesProjectSettings

getName() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageViewerUIROI2DDisplayApplicationSettings

getName() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.MeasurementColumn

getName() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawer2DTool

getName() - Method in class org.hkijena.jipipe.plugins.imageviewer.settings.ImageViewerGeneralUIApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.imageviewer.settings.LegacyImageViewer2DUIApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.imp.ImpPlugin

getName() - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionLoaderPlugin

getName() - Method in class org.hkijena.jipipe.plugins.multiparameters.MultiParameterAlgorithmsPlugin

getName() - Method in class org.hkijena.jipipe.plugins.multiparameters.MultiParametersPlugin

getName() - Method in class org.hkijena.jipipe.plugins.napari.NapariPlugin

getName() - Method in class org.hkijena.jipipe.plugins.napari.NapariPluginApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.nodeexamples.LoadExampleContextMenuAction

getName() - Method in class org.hkijena.jipipe.plugins.nodetemplate.AddTemplateContextMenuAction

getName() - Method in class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplateBoxToolPlugin

getName() - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage

getName() - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderRepository

getName() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROAnnotationReferenceData

getName() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMERODatasetReferenceData

getName() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROImageReferenceData

getName() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROPlateReferenceData

getName() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROProjectReferenceData

getName() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

getName() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

getName() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPlugin

getName() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginProjectSettings

getName() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePlugin

getName() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginProjectSettings

getName() - Method in enum org.hkijena.jipipe.plugins.omnipose.parameters.PretrainedOmnipose0Model

getName() - Method in class org.hkijena.jipipe.plugins.opencv.OpenCvPlugin

getName() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameterItemParameterAccess

getName() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.EnumParameterGenerator

getName() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.EnumParameterTypeInfo

getName() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterInputAccess

getName() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterOutputAccess

getName() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterParameterAccess

getName() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

getName() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterKeyAccess

getName() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterValueAccess

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.filesystem.FileChooserBookmark

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanParameterTypeInfo

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanPrimitiveParameterTypeInfo

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ByteParameterTypeInfo

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BytePrimitiveParameterTypeInfo

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.DoubleParameterTypeInfo

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.DoublePrimitiveParameterTypeInfo

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.FloatParameterTypeInfo

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.FloatPrimitiveParameterTypeInfo

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.IntParameterTypeInfo

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.IntPrimitiveParameterTypeInfo

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.LongParameterTypeInfo

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.LongPrimitiveParameterTypeInfo

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.NumberRangeParameterGenerator

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ShortParameterTypeInfo

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ShortPrimitiveParameterTypeInfo

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRef

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ParameterColumn

getName() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableCellAccess

getName() - Method in class org.hkijena.jipipe.plugins.parameters.StandardParametersPlugin

getName() - Method in class org.hkijena.jipipe.plugins.pipelinerender.PipelineRenderPlugin

getName() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotDataSeries

getName() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2AlgorithmInfo

getName() - Method in class org.hkijena.jipipe.plugins.plots.PlotsPlugin

getName() - Method in class org.hkijena.jipipe.plugins.plots.ui.resultanalysis.OpenPlotInJIPipeDataDisplayOperation

getName() - Method in class org.hkijena.jipipe.plugins.processes.JIPipeProcessesPluginApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.processes.ProcessesPlugin

getName() - Method in class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonPluginAdapterApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.python.CorePythonPlugin

getName() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectCondaEnvPythonInstaller.Configuration

getName() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectSystemPythonInstaller.Configuration

getName() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectVirtualEnvPythonInstaller.Configuration

getName() - Method in class org.hkijena.jipipe.plugins.python.PythonPlugin

getName() - Method in class org.hkijena.jipipe.plugins.python.PythonPluginApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.python.PythonPluginProjectSettings

getName() - Method in class org.hkijena.jipipe.plugins.r.RPlugin

getName() - Method in class org.hkijena.jipipe.plugins.r.RPluginApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.r.RPluginProjectSettings

getName() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DIndexedMeshGeometry

getName() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry

getName() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

getName() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DUnindexedMeshGeometry

getName() - Method in class org.hkijena.jipipe.plugins.scene3d.model.Scene3DGroupNode

getName() - Method in interface org.hkijena.jipipe.plugins.scene3d.model.Scene3DNode

Gets the name of this node

getName() - Method in class org.hkijena.jipipe.plugins.scene3d.Scene3DPlugin

getName() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeBackupApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDataExporterApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDataStorageProjectSettings

getName() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDefaultCacheDisplayApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDefaultResultImporterApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDownloadsApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeExtensionApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeHistoryJournalApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNodeTemplateApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectAuthorsApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectDefaultsApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeTableViewerUIApplicationSettings

getName() - Method in class org.hkijena.jipipe.plugins.settings.StandardSettingsPlugin

getName() - Method in class org.hkijena.jipipe.plugins.strings.StringsPlugin

getName() - Method in class org.hkijena.jipipe.plugins.tables.display.CacheAwareOpenResultsTableInJIPipeDataDisplayOperation

getName() - Method in class org.hkijena.jipipe.plugins.tables.display.OpenResultsTableInImageJDataDisplayOperation

getName() - Method in class org.hkijena.jipipe.plugins.tables.display.OpenResultsTableInJIPipeTabDataDisplayOperation

getName() - Method in class org.hkijena.jipipe.plugins.tables.TablesPlugin

getName() - Method in class org.hkijena.jipipe.plugins.tools.ToolsPlugin

getName() - Method in class org.hkijena.jipipe.plugins.utils.contextmenu.ParameterExplorerContextMenuAction

getName() - Method in class org.hkijena.jipipe.plugins.utils.display.ImportJIPipeProjectDataDisplayOperation

getName() - Method in class org.hkijena.jipipe.plugins.utils.UtilitiesPlugin

getName(Path, int) - Static method in class org.hkijena.jipipe.utils.PathUtils

getName() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

getNameAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

getNameAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm

getNameAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm

getNameAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROPlateReferenceAlgorithm

getNameAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm

getNameAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

getNameColumn() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.ExtractROI3DMetadataAlgorithm

getNameColumn() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.ExtractROIMetadataAlgorithm

getNameFilter() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.DataAnnotationToStringAnnotation

getNameFilter() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveDataAnnotations

getNameGenerator() - Method in class org.hkijena.jipipe.plugins.omero.nodes.manage.OMEROCreateDatasetAlgorithm

getNameOf(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData

Returns the name of a data type

getNameOf(Class<? extends JIPipeGraphNode>) - Static method in class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo

Returns the name of an algorithm

getNamespaceMap() - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.AnnotateWithXPathDataAlgorithm

getNamespaceMap() - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractTextFromXMLAlgorithm

getNamespaceMap() - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm

getNativeLocation() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUIAddSlotButtonActiveArea

getNativeLocation() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

getNativeMeasurementEnumValue() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.MeasurementColumnSortOrder.List

Returns the integer value that describes which measurements to extract

getNativeType(String) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.Hdf5Utils

getNativeValue() - Method in enum org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.TabPlacement

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm.CriteriaMethod

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm.ThresholdMethod

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurement

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurementColumn

getNativeValue() - Method in class org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurementSetParameter

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurement

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurementColumn

getNativeValue() - Method in class org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurementSetParameter

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.ijocr.utils.TesseractOCREngineMode

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.ijocr.utils.TesseractPageSegmentationMethod

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.CycleRemovalMethod

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm.Method

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter.SuppressStripesMode

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.bunwarpj.BUnwarpJMaxScaleDeformation

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.bunwarpj.BUnwarpJMinScaleDeformation

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.bunwarpj.BUnwarpJMode

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm.Mode

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurement

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementColumn

getNativeValue() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementSetParameter

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.InterpolationMethod

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.Neighborhood2D

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.Neighborhood3D

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJGradientOperator

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJVectorFieldType

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationType

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm.Compression

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.AVICompression

getNativeValue() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.ImageStatisticsSetParameter

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.Measurement

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.MeasurementColumn

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.RoiRelationMeasurement

getNativeValue() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.RoiRelationMeasurementSet

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.imp.datatypes.ImpImageOutputFormat

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.opencv.nodes.InpaintingAlgorithm.Method

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.opencv.utils.OpenCvBorderType

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.opencv.utils.OpenCvDepth

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.opencv.utils.OpenCvType

getNativeValue() - Method in enum org.hkijena.jipipe.plugins.parameters.library.primitives.FontStyleParameter

getNativeValue() - Method in enum org.hkijena.jipipe.utils.ui.ListSelectionMode

getNativeValue2D() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.Neighborhood2D3D

getNativeValue3D() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.Neighborhood2D3D

getNativeWidth() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUIAddSlotButtonActiveArea

getNativeWidth() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

getNChannels() - Method in interface org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.ColorSpace

Returns the number of pixel channels.

getNChannels() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.GreyscaleColorSpace

getNChannels() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.HSBColorSpace

getNChannels() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.IgnoreColorSpace

getNChannels() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.LABColorSpace

getNChannels() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.RGBColorSpace

getNChannels() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

getnDirections() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm

getNeighborhood() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi2DToRoi3DConverterAlgorithm

getNeighborhood() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

getNeighborhood() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

getNeighborhood() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.SeparateTouchingLabels2DAlgorithm

getNeighborhoodSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LinesHoughDetection2DAlgorithm

getNewColumnName() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.UnMeltTableAlgorithm

getNewEdgeColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

getNewEdgeColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

getNewEdgeColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

getNewEdgeLength(FilamentVertex, FilamentVertex, boolean, String) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

Gets the length of an edge that might not exist yet in the specified unit

getNewEdgeMetadata() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

getNewEdgeMetadata() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

getNewInstanceGenerator() - Method in class org.hkijena.jipipe.plugins.parameters.api.graph.SlotMapParameterCollection

getNewLabelColumn() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm

getNewLocationExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ReorderHyperstackSlicesExpressionAlgorithm

getNewName() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumns2Algorithm.RenamingEntry

getNewPlugins() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

A set of extensions that are new and should be made known to the user

getNewScratch() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns a new scratch directory that is unique and based on the alias ID of this node

getNewTool() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.ToolChangedEvent

getNextFillPaint() - Method in class org.hkijena.jipipe.plugins.plots.utils.ColorMapSupplier

getNextPaint() - Method in class org.hkijena.jipipe.plugins.plots.utils.ColorMapSupplier

getNextVertices() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph

getNFrames() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

getNiter() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTweaksSettings

getNmsAlgorithm() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

getNmsAlgorithm() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

getNode() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot

getNode() - Method in interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationStep

The node that the iteration step is working on

getNode() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

getNode() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

getNode() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

getNode() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

getNode() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeAddedEvent

getNode() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeRemovedEvent

getNode() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.NodeSlotsChangedEvent

getNode() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectTemplate

getNode() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataDisplayCacheControl

getNode() - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmSettingsPanel

getNode() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

getNode() - Method in class org.hkijena.jipipe.plugins.parameters.api.graph.SlotMapParameterCollection

getNodeAddedEventEmitter() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

getNodeAliasIDAnnotation() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.ExtractParametersAlgorithm

getNodeByUUID(UUID) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Gets a node by its UUID

getNodeClass() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

getNodeConnectedEventEmitter() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

getNodeCount() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

getNodeDatabase() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

getNodeDisconnectedEventEmitter() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

getNodeExamples(String) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Gets all examples for a node type ID.

getNodeExamples(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

getNodeGroup() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.groups.JIPipeDesktopNodeGroupUI

getNodeId() - Method in class org.hkijena.jipipe.api.nodes.JIPipeNodeExample

getNodeId() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm

getNodeInfo() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

getNodeInfo() - Method in class org.hkijena.jipipe.api.nodes.JIPipeNodeExample

getNodeInfo() - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmSettingsPanel

getNodeInfo() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeContextActionWrapperUIContextAction

getNodeInfo() - Method in class org.hkijena.jipipe.JIPipeService.NodeInfoRegisteredEvent

getNodeInfoDeselectedEventEmitter() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker

getNodeInfoRegisteredEventEmitter() - Method in class org.hkijena.jipipe.JIPipe

getNodeInfoRegisteredEventEmitter() - Method in interface org.hkijena.jipipe.JIPipeService

getNodeInfos() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

getNodeInfoSelectedEventEmitter() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker

getNodeInfosFromClass(Class<? extends JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Returns all node infos that create a node of the specified class

getNodeInstances() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterKeyPickerUI

getNodeLegacyCompartmentIDs() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

getNodeName(JIPipeDataSlot) - Static method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotPreview

Returns the name of the algorithm that generated the data

getNodeNameAnnotation() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.ExtractParametersAlgorithm

getNodeParameters() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

getNodeParameters() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

getNodePathMap() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopApplicationSettingsUI

getNodePathMap() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI

getNodeRegistry() - Method in class org.hkijena.jipipe.JIPipe

getNodeRegistry() - Method in interface org.hkijena.jipipe.JIPipeService

getNodeRemovedEventEmitter() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

getNodes() - Method in class org.hkijena.jipipe.api.looping.LoopGroup

getNodes() - Method in class org.hkijena.jipipe.api.run.JIPipeProjectRunSet

getNodes() - Static method in class org.hkijena.jipipe.JIPipe

getNodesAfter(int, int) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getNodeSearchSettings() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

getNodeSelectionChangedEventEmitter() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getNodeSlotsChangedEventEmitter() - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration

getNodeSlotsChangedEventEmitter() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

getNodeSlotsChangedEventEmitter() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

getNodesOfCategory(JIPipeNodeTypeCategory, boolean) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Gets all algorithms of specified category

getNodesWithinCompartment(UUID) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns the algorithms within the specified compartment ID.

getNodeTemplate() - Method in class org.hkijena.jipipe.api.nodes.JIPipeNodeExample

getNodeTemplateDownloadRepositories() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNodeTemplateApplicationSettings

getNodeTemplateRegistry() - Method in class org.hkijena.jipipe.JIPipe

getNodeTemplateRegistry() - Method in interface org.hkijena.jipipe.JIPipeService

getNodeTemplates() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

getNodeTemplates() - Static method in class org.hkijena.jipipe.JIPipe

getNodeTemplatesRefreshedEventEmitter() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

getNodeUI() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.NodeUISelectedEvent

getNodeUI() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorRunManager

getNodeUI() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUIActiveArea

getNodeUIActionRequestedEventEmitter() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getNodeUIActionRequestedEventEmitter() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

getNodeUILocationPerViewModePerCompartment() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Gets the location map (writable) as map from compartment UUID to visual mode to location

getNodeUILocationWithin(String, String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the location within the specified compartment or null if none is set

getNodeUIs() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getNodeUISelectedEventEmitter() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getNodeUIsFor(Set<T>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getNodeUUID() - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.ClearedEvent

getNodeUUID() - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.StoredEvent

getNodeUUID() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeCachedDataSlotDataSource

getNodeUUID() - Method in class org.hkijena.jipipe.plugins.parameters.library.graph.GraphNodeReferenceParameter

getNodeUUIDAnnotation() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.ExtractParametersAlgorithm

getNodeUUIDs() - Method in class org.hkijena.jipipe.api.run.JIPipeProjectRunSet

getNoImageIcon() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Returns the icon to use if the image couldn't be found.

getNoise() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.FindMaxima3DAlgorithm

getNoiseSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

getNoiseType() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseSettings

getNonArtifactIcon() - Method in class org.hkijena.jipipe.api.environments.JIPipeProcessArtifactEnvironment

getNonArtifactIcon() - Method in class org.hkijena.jipipe.plugins.ijfilaments.environments.TSOAXEnvironment

getNonArtifactIcon() - Method in class org.hkijena.jipipe.plugins.ijocr.environments.TesseractOCREnvironment

getNonArtifactIcon() - Method in class org.hkijena.jipipe.plugins.ilastik.environments.IlastikEnvironment

getNonParameterInputSlots() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

getNonSpatialLocation() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

getNormalize() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.SymmetryFilter3DAlgorithm

getNormalizePercentile() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTweaksSettings

getNormals() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DIndexedMeshGeometry

getNormals() - Method in interface org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DMeshGeometry

getNormals() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DUnindexedMeshGeometry

getNormalsIndex() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DIndexedMeshGeometry

getNormalsIndex() - Method in interface org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DMeshGeometry

getNormalsIndex() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DUnindexedMeshGeometry

getNotification() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.DismissedEvent

getNotification() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.PushedEvent

getNotificationInbox() - Method in interface org.hkijena.jipipe.api.JIPipeWorkbench

Allows to send notifications on a workbench-level

getNotificationInbox() - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

getNotificationInbox() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

getNotificationInbox() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDummyWorkbench

getNotifications() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

getNotifications() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox

getNotifications() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableLogEntry

getNotifyInterval() - Method in class org.hkijena.jipipe.api.JIPipePercentageProgressInfo

getNoWindows() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

getNSlices() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

getNSpots() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotsCollectionData

getNTracks() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

getNuclearChannel() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

getNuclearChannel() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2ChannelSettings

getNumArgs() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

getNumberOf(JIPipeValidationReportEntryLevel) - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReport

getNumberOfBackgroundRadialSectors() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

getNumBins() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm

getNumBins() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm

getNumBins() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

getNumChannels() - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

getNumChannels() - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

getNumDataAnnotationColumns() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.AnnotateWithDataTableProperties

getNumDimensions() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageDimensions

getNumEpochs() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

getNumEpochs() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

getNumEpochs() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

getNumEpochs() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

getNumEpochs() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

getNumEpochs() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

getNumEpochs() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

getNumFrames() - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

getNumFrames() - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

getNumIncompleteOptional() - Method in class org.hkijena.jipipe.plugins.batchassistant.DataBatchStatusData

getNumIncompleteRequired() - Method in class org.hkijena.jipipe.plugins.batchassistant.DataBatchStatusData

getNumIterationSteps() - Method in interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationContext

Number of available iteration steps

getNumIterationSteps() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMutableIterationContext

getNumMerging() - Method in class org.hkijena.jipipe.plugins.batchassistant.DataBatchStatusData

getNumPeaks() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

getNumPeaks() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

getNumRows() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

getNumRows() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon

getNumRowsAnnotation() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.AnnotateWithDataTableProperties

getNumScales() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.FrangiVesselnessFeatures

getNumSlices() - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

getNumSlices() - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

getNumTestImagesPerEpoch() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

getNumTestImagesPerEpoch() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTrainingTweaksSettings

getNumTextAnnotationColumns() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.AnnotateWithDataTableProperties

getNumThreads() - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration

getNumThreads() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

getNumThreads() - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

getNumThreads() - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRunSettings

getNumThreads() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersAlgorithm

getNumThreads() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaClassification2DAlgorithm

getNumThreads() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaClassification3DAlgorithm

getNumTilesX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

getNumTilesX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

getNumTilesY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

getNumTilesY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

getNumTrainingImagesPerEpoch() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

getNumTrainingImagesPerEpoch() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTrainingTweaksSettings

getNumTrials() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm

getNumVertices() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DIndexedMeshGeometry

getNumVertices() - Method in interface org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DMeshGeometry

getNumVertices() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DUnindexedMeshGeometry

getNvidiaSmiPath() - Static method in class org.hkijena.jipipe.utils.CUDAUtils

getObject3D() - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

getObjectMapper() - Static method in class org.hkijena.jipipe.utils.json.JsonUtils

getOctaveSizeLimits() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SIFTParameters

getOffset() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.PairOfPointsImageJ2ShapeData

getOldLabelColumn() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm

getOldTool() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.ToolChangedEvent

getOmeXMLDataAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm

getOmnipose0Environment() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginProjectSettings

getOpacity() - Method in class org.hkijena.jipipe.plugins.ij3d.utils.Roi3DDrawer

getOpacity() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

getOpacity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel

Deprecated.

getOpacity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

getOpacity() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

getOpacity() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageBlendLayer

getOpacity() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

getOpacityStep() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopAnimatedIcon

getOpenInputSlots() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns all input slots that do not have data set.

getOpenTabs() - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopJIPipeProjectTabMetadata

getOpenWindows() - Static method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

getOperands() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm

Deprecated.

getOperands() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DAlgorithm

Deprecated.

getOperation() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ColumnOperationEntry

getOperation() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ROI3DCalculatorAlgorithm

getOperation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm

getOperation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm

Deprecated.

getOperation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DAlgorithm

Deprecated.

getOperation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DMergingAlgorithm

Deprecated.

getOperation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm

getOperation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm

getOperation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm

getOperation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm

getOperation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm

getOperation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiCalculatorAlgorithm

getOperation() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.IntegratingColumnOperationEntry

getOperator() - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionOperatorEntry

getOperator() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.OperationNode

getOpInfo() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

getOptionalParameter() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

getOrcid() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

getOrcidUrl() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

getOrCreateBand(String) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Task

getOrCreateBand(String, String) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Task

getOrCreateColumnIndex(String, boolean) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Returns the index of an existing column or creates a new column if it does not exist

getOrCreateDataAnnotationColumnArray_(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets the annotation data column or creates it Ensures that the output size is equal to getRowCount() NOT THREAD-SAFE, REQUIRES A WRITE LOCK!

getOrCreateMenu(String...) - Method in class org.hkijena.jipipe.utils.MenuManager

getOrCreateParameterDataOutputSlot() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

Gets or creates the output slot for exported module parameters The slot has a data type ParametersData

getOrCreateTask(String) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon

getOrCreateTask(String, String) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon

getOrCreateTextAnnotationColumnArray_(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets the annotation column or creates it Ensures that the output size is equal to getRowCount() NOT THREAD-SAFE, REQUIRES A WRITE LOCK!

getOrder() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation

getOrder() - Method in interface org.hkijena.jipipe.api.data.JIPipeLegacyDataOperation

getOrder() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

getOrder() - Method in class org.hkijena.jipipe.plugins.core.data.CopyContainingFolderDataImportOperation

getOrder() - Method in class org.hkijena.jipipe.plugins.core.data.DefaultDataDisplayOperation

getOrder() - Method in class org.hkijena.jipipe.plugins.core.data.OpenContainingFolderDataImportOperation

getOrder() - Method in class org.hkijena.jipipe.plugins.core.data.OpenInNativeApplicationDataImportOperation

getOrder() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExtractParent

getOrder() - Method in class org.hkijena.jipipe.plugins.filesystem.resultanalysis.CopyPathDataDisplayOperation

getOrder() - Method in class org.hkijena.jipipe.plugins.filesystem.resultanalysis.OpenPathDataDisplayOperation

getOrder() - Method in class org.hkijena.jipipe.plugins.ij3d.display.AddROI3DToManagerDataDisplayOperation

getOrder() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.trackscheme.ShowTrackSchemeDataDisplayOperation

getOrder() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.AddToROIManagerDataDisplayOperation

getOrder() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInImageJ3DViewerDataDisplayOperation

getOrder() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInImageJDataDisplayOperation

getOrder() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInNapariDataDisplayOperation

getOrder() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImportImageJPathDataDisplayOperation

getOrder() - Method in class org.hkijena.jipipe.plugins.plots.ui.resultanalysis.OpenPlotInJIPipeDataDisplayOperation

getOrder() - Method in class org.hkijena.jipipe.plugins.tables.display.CacheAwareOpenResultsTableInJIPipeDataDisplayOperation

getOrder() - Method in class org.hkijena.jipipe.plugins.tables.display.OpenResultsTableInImageJDataDisplayOperation

getOrder() - Method in class org.hkijena.jipipe.plugins.tables.display.OpenResultsTableInJIPipeTabDataDisplayOperation

getOrder() - Method in class org.hkijena.jipipe.plugins.utils.display.ImportJIPipeProjectDataDisplayOperation

getOrderAssignment() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackToDimensionMerger2Algorithm

getOrderedCompositeBlendLayers() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

getOrderExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm

Deprecated.

getOrderExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2

getOrderMetadataKey() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FindLinearFilamentVertexOrderAlgorithm

getOriginalBitDepth() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo

getOriginalHeight() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo

getOriginalHeightAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

getOriginalName(JIPipeParameterTree) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference

Gets the name in the original graph Returns null if resolve() is unsuccessful

getOriginalProjectPath() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItem

getOriginalProjectPath() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItemCollection

getOriginalSizeCAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

getOriginalSizeTAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

getOriginalSizeZAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

getOriginalWidth() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo

getOriginalWidthAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

getOrOpenPipelineEditorTab(JIPipeProjectCompartment, boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

Opens the graph editor for specified compartment

getOutline() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process.OutlineRoi3DAlgorithm

getOutline() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.RemoveBorderRoisAlgorithm

getOutline() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.OutlineRoiAlgorithm

getOutput() - Method in class org.hkijena.jipipe.api.backups.CollectBackupsRun

getOutput() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter

getOutputAnnotation() - Method in class org.hkijena.jipipe.plugins.forms.utils.SingleAnnotationIOSettings

getOutputBackgroundColumn() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator

getOutputBackgroundColumn() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator

getOutputBackgroundColumn() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator

getOutputCategoryColumnName() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.MeltTableAlgorithm

getOutputClass() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter

getOutputColumnBinCount() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

getOutputColumnBinMax() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

getOutputColumnBinMin() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

getOutputColumnClusterId() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm.OutputSettings

getOutputColumnClusterId() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm.OutputSettings

getOutputColumnClusterId() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm.OutputSettings

getOutputColumnClusterSize() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm.OutputSettings

getOutputColumnClusterSize() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm.OutputSettings

getOutputColumnClusterSize() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm.OutputSettings

getOutputColumnDistanceToCenter() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm.OutputSettings

getOutputColumnDistanceToCenter() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm.OutputSettings

getOutputColumnName() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ApplyExpressionToTableByColumnAlgorithm.ProcessingItem

getOutputColumnName() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm.OutputColumn

getOutputColumnName() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm.AdditionalColumn

Deprecated.

getOutputColumns() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm

getOutputColumnValues() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ApplyExpressionToTableByColumnAlgorithm.ProcessingItem

getOutputColumnValues() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm.OutputColumn

getOutputColumnValues() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm.AdditionalColumn

Deprecated.

getOutputDimension() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

getOutputDimension() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.CreateStackAlgorithm

getOutputDirectory() - Method in class org.hkijena.jipipe.api.project.JIPipeArchiveProjectToDirectoryRun

getOutputDirectory() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter

getOutputDirectory() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataTableByParameter

getOutputDirectory() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.ExportROI3DAlgorithm

Deprecated.

getOutputDirectory() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

getOutputDirectory() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm

Deprecated.

getOutputDirectory() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm

Deprecated.

getOutputDirectory() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm

Deprecated.

getOutputDirectory() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsExporterAlgorithm

Deprecated.

getOutputDirectory() - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm

Deprecated.

getOutputExtension() - Method in class org.hkijena.jipipe.plugins.strings.JsonData

getOutputExtension() - Method in class org.hkijena.jipipe.plugins.strings.StringData

The extension that is generated by the output function

getOutputExtension() - Method in class org.hkijena.jipipe.plugins.strings.URIData

getOutputExtension() - Method in class org.hkijena.jipipe.plugins.strings.XMLData

getOutputFile() - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderPackage

getOutputFile() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Video2DExporterRun

getOutputFolder() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Stack2DExporterRun

getOutputForegroundColumn() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator

getOutputForegroundColumn() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator

getOutputForegroundColumn() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator

getOutputFormat() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm

getOutputFromImageJImporters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.MacroWrapperAlgorithm

getOutputImage() - Method in class org.hkijena.jipipe.plugins.pipelinerender.RenderPipelineRun

The generated image.

getOutputImageType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.MatrixToImageAlgorithm

getOutputImageType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableToImageAlgorithm

getOutputIndices() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm

getOutputKeyColumn() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator

getOutputKeyColumn() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm

getOutputModuleIO() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

getOutputName() - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.StoredEvent

getOutputNode(String) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

getOutputNodes() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

getOutputOutgoingTargetSlots(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns the list of input slots that are provided by the source slot Returns an empty set if the target is an input or no slot exists

getOutputParameters() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

getOutputParameters() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

getOutputParameters() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

getOutputParameters() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

getOutputParameters() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

getOutputParameters() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

getOutputParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm

getOutputParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm

getOutputParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

getOutputParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm

getOutputPath() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

getOutputPath() - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRunSettings

getOutputSelectedEventEmitter() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI

getOutputSettings() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

getOutputSettings() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm

getOutputSettings() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm

getOutputSettings() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm

getOutputSlot(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the output slot with the specified name.

getOutputSlotExporters() - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration

getOutputSlotMap() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Gets all output slot instances

getOutputSlotMap() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

getOutputSlotName() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartmentOutput

getOutputSlotName(ModuleItem<?>) - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

getOutputSlotOrder() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

getOutputSlotOrder() - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration

getOutputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

getOutputSlots() - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration

getOutputSlots() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

getOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewCompartmentNodeDatabaseEntry

getOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

getOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

getOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

getOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

getOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

getOutputSlots() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry

getOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo

getOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

getOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns all output slots ordered by the slot order

getOutputSlots() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

Returns general output data.

getOutputSlots() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

getOutputSlots() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo

getOutputSlots() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo

getOutputSlots() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

getOutputSlots() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2AlgorithmInfo

getOutputSlotsWithRole(JIPipeDataSlotRole) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Gets all input slots that have the specified role

getOutputSlotToArgIndexMap() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

getOutputsString() - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration

getOutputStream() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree

getOutputTable() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation.ImportDataRun

getOutputTableColumnInfos() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

getOutputTableModel() - Method in class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopSummarizeTableColumnsDialogUI

getOutputThresholdColumn() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator

getOutputThresholdColumn() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator

getOutputThresholdColumn() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator

getOutputType() - Method in interface org.hkijena.jipipe.api.data.JIPipeDataConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ImplicitResultsTableDataConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.clij2.datatypes.CLIJImageToImagePlusDataConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.clij2.datatypes.ImagePlusDataToCLIJImageDataConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImplicitPathTypeConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.FilamentsToRoi3dDataTypeConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.FilamentsToRoiDataTypeConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.SpotsToRoiConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagej2.converters.ImageJ1ToImageJ2Converter

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagej2.converters.ImageJ2ToImageJ1Converter

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling2DAlgorithm

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling3DAlgorithm

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.ColorToGreyscaleExpression2D

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyColorMathExpression2DExpression

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap2DAlgorithm

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap3DAlgorithm

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.GeodesicDistanceMap2DAlgorithm

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.LabelChamferDistanceMap3DAlgorithm

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.ImagePlusToOMEImageTypeConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.ImageToLUTTypeConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.ImageTypeConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.ImplicitImageTypeConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.LUTToImageTypeConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.OMEImageToImagePlusTypeConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.OmeImageToOMEXMLTypeConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.OMEImageToROITypeConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.PlotToImageTypeConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImageJImageToImpImageDataTypeConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageToImageJImageDataTypeConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.multiparameters.converters.ParametersDataToResultsTableDataConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.ImageJToOpenCvDataTypeConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvToImageJDataTypeConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.plots.converters.PlotToTableConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.strings.StringDataConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.tables.DoubleArrayColumnToTableConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.tables.StringArrayColumnToTableConverter

getOutputType() - Method in class org.hkijena.jipipe.plugins.utils.datatypes.PathDataToJIPipeOutputConverter

getOutputValueColumn() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator

getOutputValueColumn() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm

getOutputValueColumnName() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.MeltTableAlgorithm

getOutputVectorSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm

getOutputZipFile() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToZIPExporterRun

getOutsideColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

getOverlapFilter() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

getOverlapFilter() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

getOverlapFilter() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings

getOverlapFilter() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

getOverlapFilter() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

getOverlapFilterMeasurements() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm

getOverlapFilterMeasurements() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

getOverlapFilterMeasurements() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm

getOverlapFilterMeasurements() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm

getOverlapFilterMeasurements() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

getOverlapResolution() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

getOverlapThreshold() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

getOverlapX() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling2DSettings

getOverlapX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

getOverlapX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

getOverlapY() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling2DSettings

getOverlapY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

getOverlapY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

getOverlays() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

Gets overlay data

getOverlays() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

getOverriddenParameters() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

getOverrideArguments() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessIteratingAlgorithm

getOverrideArguments() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessMergingAlgorithm

getOverrideAxes() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.ExportIlastikHDF5ImageAlgorithm

getOverrideAxes() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.ImportIlastikHDF5ImageAlgorithm

getOverrideCharAllowList() - Method in class org.hkijena.jipipe.plugins.ijocr.nodes.TesseractOCRAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROPlateReferenceAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMERODatasetReferenceDataSource

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROImageReferenceDataSource

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROPlateReferenceDataSource

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROProjectReferenceDataSource

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROScreenReferenceDataSource

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROWellReferenceDataSource

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROImageAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROTableAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.manage.OMEROCreateDatasetAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListDatasetImagesAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListDatasetsAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListGroupsAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListPlatesAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListProjectsAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListScreensAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListWellImagesAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListWellsAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROImageToDatasetAlgorithm

getOverrideCredentials() - Method in class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROTableAlgorithm

getOverrideCredentials() - Method in interface org.hkijena.jipipe.plugins.omero.OMEROCredentialAccessNode

getOverrideDPI() - Method in class org.hkijena.jipipe.plugins.ijocr.nodes.TesseractOCRAlgorithm

getOverrideEdgeColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

getOverrideEdgeColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

getOverrideEdgeRadius() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

getOverrideEdgeThickness() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

getOverrideEnvironment() - Method in interface org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2EnvironmentAccessNode

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

getOverrideEnvironment() - Method in interface org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3EnvironmentAccessNode

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

getOverrideEnvironment() - Method in interface org.hkijena.jipipe.plugins.ilastik.environments.IlastikEnvironmentAccessNode

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

getOverrideEnvironment() - Method in interface org.hkijena.jipipe.plugins.omnipose.OmniposeEnvironmentAccessNode

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.IteratingPythonScriptAlgorithm

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.MergingPythonScriptAlgorithm

getOverrideEnvironment() - Method in interface org.hkijena.jipipe.plugins.python.algorithms.python.PythonEnvironmentAccessNode

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.PythonScriptAlgorithm

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectCondaEnvPythonInstaller.Configuration

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.r.algorithms.ImportRDatasetAlgorithm

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.r.algorithms.IteratingRScriptAlgorithm

getOverrideEnvironment() - Method in class org.hkijena.jipipe.plugins.r.algorithms.MergingRScriptAlgorithm

getOverrideEnvironment() - Method in interface org.hkijena.jipipe.plugins.r.REnvironmentAccessNode

getOverrideFillColor() - Method in class org.hkijena.jipipe.plugins.ij3d.utils.Roi3DDrawer

getOverrideFillColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

getOverrideFillColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

getOverrideFillColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

getOverrideFillColor() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

getOverrideInstallationPath() - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

getOverrideLineColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

getOverrideLineColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

getOverrideLineColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

getOverrideLineColor() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

getOverrideLineWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

getOverrideLineWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

getOverrideLineWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

getOverrideLineWidth() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

getOverrideMeshColor() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm

getOverrideRadius() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SubdivideFilamentEdges

getOverrideTempDirectory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDataStorageProjectSettings

getOverrideTesseractOCREnvironment() - Method in class org.hkijena.jipipe.plugins.ijocr.nodes.TesseractOCRAlgorithm

getOverrideValue() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SubdivideFilamentEdges

getOverrideVertexColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

getOverrideVertexColor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

getOverrideVertexRadius() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

getOverrideVertexRadius() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

getOverwriteHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

getOverwriteHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingZeroImage

getOverwriteOutputBitDepth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

getOverwriteOutputBitDepth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingZeroImage

getOverwriteSizeC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawMaskAlgorithm

getOverwriteSizeC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawROIAlgorithm

getOverwriteSizeC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

getOverwriteSizeC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingZeroImage

getOverwriteSizeT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawMaskAlgorithm

getOverwriteSizeT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawROIAlgorithm

getOverwriteSizeT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

getOverwriteSizeT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingZeroImage

getOverwriteSizeZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawMaskAlgorithm

getOverwriteSizeZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawROIAlgorithm

getOverwriteSizeZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

getOverwriteSizeZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingZeroImage

getOverwriteWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

getOverwriteWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingZeroImage

getP() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm

getPageSegmentationMethod() - Method in class org.hkijena.jipipe.plugins.ijocr.nodes.TesseractOCRAlgorithm

getPair() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterKeyAccess

getPair() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterValueAccess

getPanelComponent(String, Class<T>) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

getPanelIcon() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

getPanelIcon() - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

getPanelIcon() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

getPanelIcon() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

getPanelIcon() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

The icon for the category if a new one must be created

getPanelIcon() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.GeneralImageViewerPanelPlugin2D

getPanelIcon() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawer2DTool

getPanelIcon() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

getPanelIcon() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MeasurementDrawerPlugin2D

getPanelIcon() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

getPanelLocation() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

getPanelLocation() - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

getPanelLocation() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

getPanelLocation() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

getPanelLocation() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

getPanelLocation() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.GeneralImageViewerPanelPlugin2D

getPanelLocation() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawer2DTool

getPanelLocation() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

getPanelLocation() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

getPanelName() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

getPanelName() - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

getPanelName() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

getPanelName() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

getPanelName() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

The tool panel category where this tool is shown

getPanelName() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.GeneralImageViewerPanelPlugin2D

getPanelName() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawer2DTool

getPanelName() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

getPanelName() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MeasurementDrawerPlugin2D

getPanelName() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

getPanels() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

getPanelsAtLocation(JIPipeDesktopDockPanel.PanelLocation) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

getPanelSide() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.PanelSideVisibilityChangedEvent

getPanelSideVisibilityChangedEventEmitter() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

getParallelizationBatchSize() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm

getParallelizationBatchSize() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm

getParallelizationBatchSize() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

getParallelizationBatchSize() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm

getParallelizationBatchSize() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm

getParallelizationBatchSize() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

getParallelizationBatchSize() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm

getParallelizationBatchSize() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeParallelizedAlgorithm

Returns how many threads the actual algorithm requires.

getParallelizationBatchSize() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SpotDetectorNode

getParallelizationBatchSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

getParallelizationBatchSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.FrangiVesselnessFeatures

getParameter(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Gets a parameter by its key

getParameter(String, Class<T>) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

Gets a parameter

getParameter(Class<T>) - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

Gets or creates a parameter instance.

getParameter() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter

getParameter(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI.ExternalEditor

getParameter(JIPipeParameterCollection, String, Class<T>) - Static method in class org.hkijena.jipipe.utils.ParameterUtils

Gets a parameter from a JIPipeParameterCollection

getParameterAccess() - Method in class org.hkijena.jipipe.api.environments.JIPipeExternalEnvironmentInstaller

getParameterAccess(String) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

Gets an access instance to a parameter of the defined key

getParameterAccess() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

Gets the parameter accessor

getParameterAccess() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI.InitializationParameters

getParameterAccess() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI.ExternalEditor

getParameterAccess() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableEditorWindow

getParameterAnnotationsPrefix() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings

getParameterAnnotationsPrefix() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

getParameterChangedEventEmitter() - Method in class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection

getParameterChangedEventEmitter() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

getParameterChangedEventEmitter() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

Emitter for changes in the parameter

getParameterChangedEventEmitter() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

getParameterChangedEventEmitter() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

getParameterChangedEventEmitter() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotDataSeries

getParameterChangedEventEmitter() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

getParameterClass() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.io.DefaultSettingsIO

getParameterClass() - Method in interface org.hkijena.jipipe.plugins.ijtrackmate.io.SettingsIO

getParameterClass() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.io.SpotFeaturePenaltyParameterListSettingsIO

getParameterClass() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter

getParameterCollection() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.BeforeAddParameterEvent

getParameterCollection() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

Gets the object that holds the parameter

getParameterCollection() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OMEAccessorTemplate

getParameterCollection() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI.ExternalEditor

getParameterData() - Method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersData

getParameterFieldClass() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

Returns the field class of the parameter

getParameterIds() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OMEAccessorTemplate

getParameterIdToArgIndexMap() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionFunction

Returns info about the parameter at index

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionOperator

Returns info about the parameter at index (left to right)

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionOperatorEntry

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.FirstIndexOfFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.GetFirstItemFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.GetItemFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.GetItemOrDefaultFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.GetLastItemFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.InvertFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.LastIndexOfFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.SliceAfterFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.SliceBeforeFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.SliceFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.SortAscendingArrayFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.SortDescendingArrayFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.SummarizeAnnotationsMapFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.collections.SummarizeMapFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.CreateHSBColorFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.CreateLABColorFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.CreateRGBColorFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.FalseColorsFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.HexToRGBFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.HSBToLABFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.HSBToRGBFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.LABToHSBFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.LABToRGBFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.RGBToHexFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.RGBToHSBFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.color.RGBToLABFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.ColumnOperationAdapterFunction

Returns info about the parameter at index

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.ContainsStringPredicateFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.control.CaseFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.control.IfElseExprFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.control.IfElseFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.control.WhereFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.convert.ToBooleanFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.convert.ToIntegerFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.convert.ToNumber2Function

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.convert.ToNumberFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.convert.ToStringFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.CopyNFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.EvaluateFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.ExpressionSequenceFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.filesystem.GetParentDirectoryFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.filesystem.GetPathNameFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.filesystem.IsDirectoryFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.filesystem.IsFileFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.filesystem.PathExistsFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.ForEachFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.functions.DefineUserFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.functions.EvaluateUserFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.GlobStringPredicateFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.LengthFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.ClampFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.DoubleToStringFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.IsFiniteFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.IsInfiniteFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.IsNaNFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.NaNToNumFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.PercentageFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.RandomFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.math.RoundToDecimalsFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.quantities.QuantityConvertFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.quantities.QuantityGetUnitFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.quantities.QuantityGetValueFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.RemoveDuplicatesFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.RunFunctionFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.scripts.JavaScriptFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.scripts.JythonScriptFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.SequenceFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.AccumulateFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.CumulativeTransformArrayFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.PercentileFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.statistics.TransformArrayFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.EqualsStringPredicateFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.ExtractRegexMatchesFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.RegexStringPredicateFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringEndsWithPredicateFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringFirstIndexOfFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringFormatFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringJoinFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringLastIndexOfFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringRegexReplaceFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringReplaceFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringSliceBeforeFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringSliceFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringSplitFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringStartsWithPredicateFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringToLowerCaseFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringToUpperCaseFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringTruncateFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.SummarizeVariablesFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.VariableExistsFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.variables.GetVariableFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.variables.HasVariableFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.variables.SetMissingVariableFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.variables.SetVariableFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.variables.SetVariableIfFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.functions.variables.SetVariablesFunction

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.AdditionFunctionOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.ContainsOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.ContainsOperator2

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.ElementAccessOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.EqualityPredicateOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.InequalityPredicateOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.LogicalAndOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.LogicalNotOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.LogicalOrOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.LogicalXOrOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericDivideFunctionOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericExponentFunctionOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericGreaterThanOrEqualPredicateOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericGreaterThanPredicateOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericLessThanOrEqualPredicateOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericLessThanPredicateOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericModuloFunctionOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.NumericMultiplyFunctionOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.ResolveVariableOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.SubtractionFunctionOperator

getParameterInfo(int) - Method in class org.hkijena.jipipe.plugins.expressions.operators.VariableExistsOperator

getParameterKey() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI.ExternalEditor

getParameterKeyAssignments() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.PathsToJIPipeProjectParametersAlgorithm

getParameterKeyFilter() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.ExtractParametersAlgorithm

getParameterReferenceGroups() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection

getParameterReferencesChangedEventEmitter() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup

getParameterReferencesChangedEventEmitter() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection

getParameters() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

getParameters() - Method in class org.hkijena.jipipe.api.compat.ImageJDataExportOperation

getParameters() - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

getParameters() - Method in class org.hkijena.jipipe.api.grouping.JsonAlgorithm

getParameters() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccessGroup

getParameters() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccessGroupList

getParameters() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeCustomParameterCollection

Returns all parameters Please note that those parameters must be sourced in this collection.

getParameters() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

getParameters(JIPipeParameterCollection) - Static method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Accesses the parameters of a collection

getParameters() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

getParameters() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

getParameters() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectInfoParameters

getParameters() - Method in class org.hkijena.jipipe.desktop.app.parameterreference.JIPipeDesktopGraphNodeParameterReferenceGroupCollectionEditorUI

getParameters() - Method in class org.hkijena.jipipe.desktop.app.settings.project.JIPipeDesktopMergedProjectSettings

getParameters() - Method in class org.hkijena.jipipe.desktop.app.settings.project.JIPipeDesktopMergedProjectSettingsUserDirectories

getParameters() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNode

getParameters() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo

getParameters() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNode

getParameters() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo

getParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationAlgorithm

getParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OMEAccessorParameter

getParameters() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersAlgorithm

getParametersByPriority() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

getParametersData() - Method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersDataViewerPanel

getParameterSlot() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

Returns the parameter slot if enabled

getParameterSlotAlgorithmSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

getParametersString() - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration

getParameterStructureChangedEventEmitter() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

getParameterStructureChangedEventEmitter() - Method in class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection

getParameterStructureChangedEventEmitter() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

getParameterStructureChangedEventEmitter() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

Emitter for changes in the structure of parameters

getParameterStructureChangedEventEmitter() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

getParameterStructureChangedEventEmitter() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotDataSeries

getParametersUI() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.properties.JIPipeDesktopCompartmentsParametersPanel

getParametersUI() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.properties.JIPipeDesktopPipelineParametersPanel

getParameterTable() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersTableAlgorithm

getParameterTable() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ModelChangedEvent

getParameterTable() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableEditorWindow

getParameterTree(boolean, Set<UUID>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Extracts all parameters as tree.

getParameterTree() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

getParameterTree() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI.InitializationParameters

getParameterTree() - Method in class org.hkijena.jipipe.desktop.app.parameterreference.JIPipeDesktopGraphNodeParameterReferenceGroupCollectionEditorUI

getParameterTree() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

getParameterTree() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI.ExternalEditor

getParameterTypeInfo() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

Returns the info for the current parameter type

getParameterTypeRegistry() - Method in class org.hkijena.jipipe.JIPipe

getParameterTypeRegistry() - Method in interface org.hkijena.jipipe.JIPipeService

getParameterTypes() - Static method in class org.hkijena.jipipe.JIPipe

getParameterUIChangedEventEmitter() - Method in class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection

getParameterUIChangedEventEmitter() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

getParameterUIChangedEventEmitter() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

Emitter for changes in the parameter user interface

getParameterUIChangedEventEmitter() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

getParameterUIChangedEventEmitter() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotDataSeries

getParent() - Method in class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents

getParent() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Gets the tree assigned as parent.

getParent() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

getParent() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun

getParent() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportContext

getParent() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI.InitializationParameters

getParent() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopAnimatedIcon

getParent() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.SpinnerIcon

getParent() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters

getParent() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.GeneratedParameters

getParent() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterInputAccess

getParent() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterOutputAccess

getParent() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterParameterAccess

getParent() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

getParent() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterKeyAccess

getParent() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterValueAccess

GetParentDirectoryFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.filesystem

GetParentDirectoryFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.filesystem.GetParentDirectoryFunction

getParentGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the graph this algorithm is located in.

getParentModel() - Method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp3.PretrainedCellpose3DenoiseModel

getParentPath() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.RelativizeByParameter

getParentPathAnnotation() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotateWithPathProperties

getPassword() - Method in class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment

getPassword() - Method in class org.hkijena.jipipe.plugins.parameters.library.auth.PasswordParameter

getPath() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference

getPath() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

getPath() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectDirectories.DirectoryEntry

getPath() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.CommonDirectory

getPath() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPathEditorComponent

getPath() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathDataSource

getPath() - Method in class org.hkijena.jipipe.plugins.filesystem.dataypes.PathData

getPath() - Method in class org.hkijena.jipipe.plugins.parameters.library.filesystem.FileChooserBookmark

getPathIOMode() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathFromUserDataSource

getPathMode() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPathEditorComponent

getPathName() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.RenameByString

GetPathNameFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.filesystem

GetPathNameFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.filesystem.GetPathNameFunction

getPathNameSafe(Path) - Static method in class org.hkijena.jipipe.utils.PathUtils

getPaths() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathListDataSource

getPathType() - Method in class org.hkijena.jipipe.api.compat.ui.AbstractPathImageJDataExporterUI

getPathType() - Method in class org.hkijena.jipipe.api.compat.ui.AbstractPathImageJDataImporterUI

getPathType() - Method in class org.hkijena.jipipe.api.compat.ui.FileImageJDataExporterUI

getPathType() - Method in class org.hkijena.jipipe.api.compat.ui.FileImageJDataImporterUI

getPathType() - Method in class org.hkijena.jipipe.api.compat.ui.FolderImageJDataExporterUI

getPathType() - Method in class org.hkijena.jipipe.api.compat.ui.FolderImageJDataImporterUI

getPathType() - Method in class org.hkijena.jipipe.api.compat.ui.PathImageJDataExporterUI

getPathType() - Method in class org.hkijena.jipipe.api.compat.ui.PathImageJDataImporterUI

getPathType() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNext

getPathType() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextPathTypeMetadata

getPathType() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathFromUserDataSource

getPathType() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

getPeakThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

getPeakThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

getPenalty() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeaturePenaltyParameter

getPercent() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.AddSaltAndPepperNoise2DAlgorithm

getPercentile() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.PercentileThreshold8U2DAlgorithm

getPerformanceParameters() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

getPermissions() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

getPerpendicularVector(Vector3f) - Static method in class org.hkijena.jipipe.plugins.scene3d.utils.Scene3DUtils

getPersistence() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess

getPersistence() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

getPersistence() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess

Controls the persistence of the parameter

getPersistence() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

getPersistence() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

getPerSlotStatus() - Method in class org.hkijena.jipipe.plugins.batchassistant.DataBatchStatusData

getPhysicalDimensionT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm

getPhysicalDimensionT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm

getPhysicalDimensionT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm

getPhysicalDimensionTAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

getPhysicalDimensionTAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

getPhysicalDimensionValue() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm

getPhysicalDimensionValue() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm

getPhysicalDimensionValue() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm

getPhysicalDimensionValueAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

getPhysicalDimensionValueAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

getPhysicalDimensionX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm

getPhysicalDimensionX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm

getPhysicalDimensionX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm

getPhysicalDimensionXAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

getPhysicalDimensionXAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

getPhysicalDimensionY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm

getPhysicalDimensionY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm

getPhysicalDimensionY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm

getPhysicalDimensionYAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

getPhysicalDimensionYAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

getPhysicalDimensionZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm

getPhysicalDimensionZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm

getPhysicalDimensionZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm

getPhysicalDimensionZAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

getPhysicalDimensionZAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

getPhysicalSizeX() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

getPhysicalSizeX() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

getPhysicalSizeY() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

getPhysicalSizeY() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

getPhysicalSizeZ() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

getPhysicalSizeZ() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

getPhysicalVoxelSizeX() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

getPhysicalVoxelSizeY() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

getPhysicalVoxelSizeZ() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

getPicker() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.NodeInfoDeselectedEvent

getPicker() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.NodeInfoSelectedEvent

getPicker() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.SelectedInfosChangedEvent

getPid() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ExtendedExecutor

getPid() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree

getPinnedNodeDatabaseEntries() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel

getPinnedNodeDatabaseEntries() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.nodefinder.JIPipeDesktopNodeFinderDialogUI

getPinnedNodes() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.NodeSearchSettings

getPinToolBar() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

The toolbar where the window pin controls are added.

getPinToolBar() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentPanel

getPinToolBar() - Method in class org.hkijena.jipipe.plugins.tables.display.TableViewerLegacyCacheDataViewerWindow

getPipelineEditorDockLayout() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.DockLayoutSettings

getPipelineEditorDockLayoutTemplates() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.DockLayoutSettings

getPipelineParameters() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Returns the global parameters for this pipeline

getPixel(ImageProcessor, int, int) - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.SourceWrapMode

getPixelCoordinate() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.PixelHoverEvent

getPixelFloat(ImageProcessor, int, int) - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.SourceWrapMode

getPixelHoverEventEmitter() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

getPixels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.EnlargeShrinkRoiAlgorithm

getPixelSizeX(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

getPixelSizeY(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

getPixelSizeZ(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

getPixelThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LinesHoughDetection2DAlgorithm

getPixelType() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

Returns the appropriate Java type that stores the pixel data.

getPlaceholderAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.UsePlaceholderForMissingDataAlgorithm

getPlaceholderTable() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm

Deprecated.

getPlaceholderTable() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm2

getPlainText() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

getPlaneNumberAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

getPlaneNumberAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

getPlaneStartLocation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ResliceAlgorithm

getPlate(long, int) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROGateway

getPlateId() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROPlateReferenceData

getPlateIds() - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROPlateReferenceDataSource

getPlotBuilderUI() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotSeriesEditor

getPlotDataType() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2AlgorithmInfo

getPlotNameAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

getPlotType() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

getPlotType() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotSeriesEditor

getPlotType() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTablesAlgorithm

Deprecated.

getPlotTypeParameters() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2Algorithm

getPlotTypeParameters() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTablesAlgorithm

Deprecated.

getPlugin() - Method in class org.hkijena.jipipe.desktop.app.plugins.pluginsmanager.JIPipeDesktopPluginManagerUI.PluginEntry

getPlugin(Class<T>) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

getPlugin() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D.MaskChangedEvent

getPluginDirectory() - Static method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionLoaderPlugin

getPluginInfo() - Method in class org.hkijena.jipipe.JIPipeJavaExtensionInitializationInfo

getPluginInfo() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

getPluginRegistry() - Method in class org.hkijena.jipipe.JIPipe

getPluginRegistry() - Method in interface org.hkijena.jipipe.JIPipeService

getPluginResource(String) - Static method in class org.hkijena.jipipe.utils.ResourceUtils

Gets a plugin-internal resource as URL If you want to utilize resources from your Java extension, use JIPipeResourceManager

getPluginResourceAsStream(String) - Static method in class org.hkijena.jipipe.utils.ResourceUtils

Gets a plugin-internal resource as Stream

getPluginResourceAsString(String) - Static method in class org.hkijena.jipipe.utils.ResourceUtils

Gets a plugin resource as string

getPluginResourceInverted(String) - Static method in class org.hkijena.jipipe.utils.ResourceUtils

Gets a plugin-internal resource as URL If you want to utilize resources from your Java extension, use JIPipeResourceManager

getPlugins() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

getPlugins2D() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

getPluginService() - Method in class org.hkijena.jipipe.JIPipe

getPluginType() - Method in class org.hkijena.jipipe.plugins.imagej2.io.DefaultImageJ2JIPipeModuleIOService

getPoint() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegPointHandler

Return the current point as a Point object.

getPoint() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.IndexedDoublePoint

getPoint1() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.HoughLineSegments.Line

getPoint2() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.HoughLineSegments.Line

getPoints() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegPointHandler

Return all landmarks as an array double[transformation / 2][2], except for a rigid-body transformation for which the array has size double[3][2].

getPopupMenu() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.DocumentTab

getPort() - Method in class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment

getPosition() - Method in class org.hkijena.jipipe.utils.ColorUtils.GradientStop

getPositionC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualLocationROIProperties

getPositionC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

getPositionC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

getPositionC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

getPositionC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

getPositionC() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

getPositionT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualLocationROIProperties

getPositionT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

getPositionT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

getPositionT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

getPositionT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

getPositionT() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

getPositionX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

getPositionX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

getPositionX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

getPositionX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

getPositionX() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

getPositionY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

getPositionY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

getPositionY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

getPositionY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

getPositionY() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

getPositionZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualLocationROIProperties

getPositionZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

getPositionZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

getPositionZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

getPositionZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

getPositionZ() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

getPowerSpectrumMean() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo

getPreActivationIssues() - Method in class org.hkijena.jipipe.JIPipeRegistryIssues

getPrecision() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Returns the number of digits displayed to the right of decimal point.

getPredecessors() - Method in interface org.hkijena.jipipe.api.data.context.JIPipeDataContext

Gets the known predecessors

getPredecessors() - Method in class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext

getPredictionMapsDataAnnotation() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

getPreferredSize() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getPreferredSize() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanelImageComponent

getPreferredSize() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

getPreferredSpan(int) - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Determines the preferred span for this view along an axis.

getPrefix() - Method in enum org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactAccelerationPreference

getPrefix() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.TemporaryFileDataSource

getPreprocessingScript() - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelIterating

getPreprocessingScript() - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelSimpleIterating

getPreprocessor() - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.AnnotateWithTextDataAlgorithm.Entry

getPreprocessor() - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.TextDataToTableAlgorithm.Entry

getPresets(Class<?>) - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry

Gets the presets of an environment

getPresets() - Method in class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironmentApplicationSettings

getPresets() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.TSOAXApplicationSettings

getPresets() - Method in class org.hkijena.jipipe.plugins.ijocr.settings.TesseractOCRApplicationSettings

getPresets() - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

getPresets() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginApplicationSettings

getPresets() - Method in class org.hkijena.jipipe.plugins.processes.JIPipeProcessesPluginApplicationSettings

getPresets() - Method in class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonPluginAdapterApplicationSettings

getPresets() - Method in class org.hkijena.jipipe.plugins.python.PythonPluginApplicationSettings

getPresets() - Method in class org.hkijena.jipipe.plugins.r.RPluginApplicationSettings

getPresetsListInterface(Class<?>) - Method in interface org.hkijena.jipipe.api.environments.JIPipeExternalEnvironmentSettings

Returns the presets.

getPresetsListInterface(Class<?>) - Method in class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironmentApplicationSettings

getPresetsListInterface(Class<?>) - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.TSOAXApplicationSettings

getPresetsListInterface(Class<?>) - Method in class org.hkijena.jipipe.plugins.ijocr.settings.TesseractOCRApplicationSettings

getPresetsListInterface(Class<?>) - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

getPresetsListInterface(Class<?>) - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginApplicationSettings

getPresetsListInterface(Class<?>) - Method in class org.hkijena.jipipe.plugins.processes.JIPipeProcessesPluginApplicationSettings

getPresetsListInterface(Class<?>) - Method in class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonPluginAdapterApplicationSettings

getPresetsListInterface(Class<?>) - Method in class org.hkijena.jipipe.plugins.python.PythonPluginApplicationSettings

getPresetsListInterface(Class<?>) - Method in class org.hkijena.jipipe.plugins.r.RPluginApplicationSettings

getPretrainedModel() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

getPretrainedModel() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

getPretrainedModel() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

getPretrainedModelName() - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData

getPreviewHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc.DataToPreviewAlgorithm

getPreviewSize() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

getPreviewWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc.DataToPreviewAlgorithm

getPrimary1() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

Returns the primary 1 color.

getPrimary1() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

Returns the primary 1 color.

getPrimary2() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

Returns the primary 2 color.

getPrimary2() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

Returns the primary 2 color.

getPrimary3() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

Returns the primary 3 color.

getPrimary3() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

Returns the primary 3 color.

getPrimaryMenuLocation() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

A menu location that points towards the primary menu

getPriority() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

getPriority() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

getPriority() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool

getPriority() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

getPriority() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

getPriority() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess

getPriority() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess

getPriority() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess

getPriority() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

getPriority() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess

Returns the priority for (de)serializing this parameter.

getPriority() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

getPriority() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUIActiveArea

getPriority() - Method in class org.hkijena.jipipe.plugins.graphannotation.tools.ArrowAnnotationGraphNodeTool

getPriority() - Method in class org.hkijena.jipipe.plugins.graphannotation.tools.GroupBoxAnnotationGraphNodeTool

getPriority() - Method in class org.hkijena.jipipe.plugins.graphannotation.tools.ImageBoxAnnotationGraphNodeTool

getPriority() - Method in class org.hkijena.jipipe.plugins.graphannotation.tools.TextBoxAnnotationGraphNodeTool

getPriority() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageBlendLayer

getPriority() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameterItemParameterAccess

getPriority() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterInputAccess

getPriority() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterOutputAccess

getPriority() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterParameterAccess

getPriority() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

getPriority() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterKeyAccess

getPriority() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterValueAccess

getPriority() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableCellAccess

getProcess() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ExtendedExecutor

getProcess() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree

getProcessedCategories() - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

Returns the categories of the metadata; processed for ease of use If the categories list is empty, "Uncategorized" is returned

getProcessEnvironment() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessIteratingAlgorithm

getProcessEnvironment() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessMergingAlgorithm

getProcessID(Process) - Static method in class org.hkijena.jipipe.utils.ProcessUtils

Gets the process ID of a process

getProcessorParameters() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ApplyExpressionToColumnsAlgorithm

Deprecated.

getProcessorParameters() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ApplyExpressionToTableByColumnAlgorithm

getProcessorParameters() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ConvertColumnsAlgorithm

getProcessorParameters() - Method in class org.hkijena.jipipe.plugins.tables.nodes.IntegrateColumnsAlgorithm

getProgress() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

getProgress() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo.StatusUpdatedEvent

getProgressEventEmitter() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

getProgressEventEmitter() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableWorker

getProgressInfo() - Method in class org.hkijena.jipipe.api.AbstractJIPipeRunnable

getProgressInfo() - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeDataStorage

Returns the JIPipeProgressInfo instance where information is logged

getProgressInfo() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage

getProgressInfo() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage

getProgressInfo() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage

getProgressInfo() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPWriteDataStorage

getProgressInfo() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo.StatusUpdatedEvent

getProgressInfo() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfoOutputStream

getProgressInfo() - Method in interface org.hkijena.jipipe.api.run.JIPipeRunnable

The info object that allows communication with the run

getProgressInfo() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstaller

getProgressInfo() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToFilesByMetadataExporterRun

getProgressInfo() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToOutputExporterRun

getProgressInfo() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToZIPExporterRun

getProgressInfo() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun

getProgressInfo() - Method in class org.hkijena.jipipe.JIPipe

getProgressInfo() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.JIPipeLogger

getProgressInfo() - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROGateway

getProgressInfo() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectCondaEnvPythonInstaller

getProgressInfo() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectSystemPythonInstaller

getProgressInfo() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectVirtualEnvPythonInstaller

getProgressInfo() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ExtendedExecutor

getProgressInfo() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree

getProject() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal

getProject() - Method in interface org.hkijena.jipipe.api.JIPipeWorkbench

Returns the current project if this workbench has an associated project

getProject() - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase

getProject() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Gets the JIPipeProject if this is a project or project compartment graph.

getProject() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

getProject() - Method in class org.hkijena.jipipe.api.project.JIPipeArchiveProjectRun

getProject() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectInfoParameters

getProject() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun

getProject() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

getProject() - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

getProject() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorRunManager

getProject() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

getProject() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

getProject() - Method in interface org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbenchAccess

getProject() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDummyWorkbench

getProject() - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRun

The project where the run was created

getProject() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopRunSetListCellRenderer

getProject() - Method in class org.hkijena.jipipe.desktop.app.settings.project.JIPipeDesktopMergedProjectSettings

getProject() - Method in class org.hkijena.jipipe.desktop.app.settings.project.JIPipeDesktopProjectOverviewRunManager

getProject() - Method in class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplateBox

getProject(long, long) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROGateway

Gets a project

getProject() - Method in class org.hkijena.jipipe.plugins.pipelinerender.RenderPipelineRun

getProjectAuthors() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectAuthorsApplicationSettings

getProjectCompartment() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Gets the project compartment instance of this node.

getProjectCompartmentTooltip(JIPipeProjectCompartment, JIPipeGraph) - Static method in class org.hkijena.jipipe.utils.TooltipUtils

Creates a tooltip for a project compartment

getProjectCompartmentUUID() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

getProjectDataDirs() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the currently accessible project data directories

getProjectDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.ijocr.settings.OCRPluginProjectSettings

getProjectDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginProjectSettings

getProjectDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesProjectSettings

getProjectDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginProjectSettings

getProjectDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.python.PythonPluginProjectSettings

getProjectDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.r.RPluginProjectSettings

getProjectDefaultTSOAXEnvironment() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.FilamentsPluginProjectSettings

getProjectDirectory() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the current project directory.

getProjectedAxis() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm

getProjectFile() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.RunJIPipeProjectAlgorithm

getProjectId() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROProjectReferenceData

getProjectIds() - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROProjectReferenceDataSource

getProjectOpenedEventEmitter() - Method in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopRecentProjectsListPanel

getProjectOverviewColor() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

getProjectOverviewColor() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartmentOutput

getProjectPath() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItem

getProjectPath() - Method in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopRecentProjectsListPanel.ProjectOpenedEvent

getProjectPythonAdapterLibraryEnvironment() - Method in class org.hkijena.jipipe.plugins.python.PythonPluginProjectSettings

getProjectSavePath() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

getProjectSessionId() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupSessionInfo

getProjectSettingsRegistry() - Method in class org.hkijena.jipipe.JIPipe

getProjectSettingsRegistry() - Method in interface org.hkijena.jipipe.JIPipeService

getProjectStoragePath() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupSessionInfo

getProjectTemplate() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectDefaultsApplicationSettings

getProjectTemplateDownloadRepositories() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectDefaultsApplicationSettings

getProjectTemplateRegistry() - Method in class org.hkijena.jipipe.JIPipe

getProjectTemplateRegistry() - Method in interface org.hkijena.jipipe.JIPipeService

getProjectType() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

getProjectType() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

getProjectUI() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

getProjectValidationMode() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

getProjectValidationMode() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

getProjectValidationMode() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

getProjectValidationMode() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

getProjectValidationMode() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

getProjectWindow() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

getProperties() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.FormPanelEntry

getPropertyFile() - Static method in class org.hkijena.jipipe.api.registries.JIPipeApplicationSettingsRegistry

getPropertyFile() - Static method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

getPropertyFile() - Method in class org.hkijena.jipipe.api.registries.JIPipeRecentProjectsRegistry

getProtocolDescription() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

getProtocolDescriptionAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

getProtocolIdAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

getProtocolIdentifier() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

getPruneCyclesMethod() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.SkeletonToSimplifiedFilamentsFijiAlgorithm

getPruneCyclesMethod() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm

getPruneEndsMethod() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.SkeletonToSimplifiedFilamentsFijiAlgorithm

getPruneEndsMethod() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm

getPsf() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

getPsi() - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaborKernelGenerator

getPushedEventEmitter() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox

getPyramid() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegImage

getPyramid() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegMask

getPyramidDepth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegImage

Return the depth of the image pyramid.

getPyramidDepth(int, int, int, int, int) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegUtils

getPythonExecutable() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectSystemPythonInstaller.Configuration

getQ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm

getQuery() - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeArtifactQueryParameter

getQuerySlot() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.nodefinder.JIPipeDesktopNodeFinderDialogUI

getQueue() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGenerationRun

getQueue() - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase

getQueue() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

getQuickActions(Object) - Static method in class org.hkijena.jipipe.desktop.api.nodes.JIPipeDesktopNodeQuickAction

getR() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm

getR() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm

getR() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines.HoughLine

getRadialFar() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

getRadialNear() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

getRadius() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.binary.Watershed3DSplittingAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.SymmetryFilter3DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SeedSegmentationSettings

getRadius() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

getRadius() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.DiamondImageJ2ShapeData

getRadius() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.DiamondTipsImageJ2ShapeData

getRadius() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HyperSphereImageJ2ShapeData

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurFilter2DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LaplacianOfGaussian2DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateStructureElement2DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateStructureElement3DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMaximumFilter2DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMinimumFilter2DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalVarianceFilter2DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.RemoveNaNFilter2DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyInternalGradient2DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.opencv.nodes.InpaintingAlgorithm

getRadius() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint

getRadius0() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm

getRadius1() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm

getRadius1() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.AlternatingMorphologicalFilters2DAlgorithm

getRadius1() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalFeatureContrast2DAlgorithm

getRadius1() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalTextureContrast2DAlgorithm

getRadius2() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm

getRadius2() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.AlternatingMorphologicalFilters2DAlgorithm

getRadius2() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalFeatureContrast2DAlgorithm

getRadius2() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalTextureContrast2DAlgorithm

getRadiusIncrement() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

getRadiusX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm

getRadiusX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm

getRadiusX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm

getRadiusX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm

getRadiusX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm

getRadiusX() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

getRadiusXY() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.FindMaxima3DAlgorithm

getRadiusY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm

getRadiusY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm

getRadiusY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm

getRadiusY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm

getRadiusY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm

getRadiusY() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

getRadiusZ() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.FindMaxima3DAlgorithm

getRadiusZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm

getRadiusZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm

getRadiusZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm

getRadiusZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm

getRadiusZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm

getRadiusZ() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

getRankAt(int) - Method in class org.hkijena.jipipe.utils.search.RankedData

getRatio() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

getRatio() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ExpandLabelsAlgorithm

getRatio() - Method in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.FixedRatio

getRatio() - Method in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane

getRatio() - Method in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.RatioUpdatedEvent

getRatioUpdatedEventEmitter() - Method in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane

getRawNode() - Static method in class org.hkijena.jipipe.api.registries.JIPipeApplicationSettingsRegistry

Gets the raw property files Json node

getReadOnlyDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.cellpose.Cellpose2PluginApplicationSettings

getReadOnlyDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.cellpose.Cellpose3PluginApplicationSettings

getReadOnlyDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.TSOAXApplicationSettings

getReadOnlyDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.ijocr.settings.TesseractOCRApplicationSettings

getReadOnlyDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

getReadOnlyDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesApplicationSettings

getReadOnlyDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.napari.NapariPluginApplicationSettings

getReadOnlyDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginApplicationSettings

getReadOnlyDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonPluginAdapterApplicationSettings

getReadOnlyDefaultEnvironment() - Method in class org.hkijena.jipipe.plugins.python.PythonPluginApplicationSettings

Gets the (standard) default Python environment

getReadOnlyEnvironment() - Method in class org.hkijena.jipipe.plugins.r.RPluginApplicationSettings

getReadyLabel() - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

getReagentSetDescription() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

getReagentSetDescriptionAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

getReagentSetIdAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

getReagentSetIdentifier() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

getRecentProjects() - Method in class org.hkijena.jipipe.api.registries.JIPipeRecentProjectsRegistry

getRecentProjectsRegistry() - Method in class org.hkijena.jipipe.JIPipe

getRecentProjectsRegistry() - Method in interface org.hkijena.jipipe.JIPipeService

getRectangle(Point, int, int) - Method in enum org.hkijena.jipipe.plugins.parameters.library.roi.Anchor

Reconstructs the rectangle from a location anchored inside

getRectangleCoordinates(Rectangle) - Method in enum org.hkijena.jipipe.plugins.parameters.library.roi.Anchor

Gets the coordinate inside given rectangle

getRectangleMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractROIProfileAlgorithm

getRectangles() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawOvalRoiAlgorithm

Deprecated.

getRectangles() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm

Deprecated.

getRectangles() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.AppendRectangularRoiAlgorithm

Deprecated.

getRectangles() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.DefineRectangularRoiAlgorithm

Deprecated.

getRectangles() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.ReferencedAppendRectangularRoiAlgorithm

Deprecated.

getRectangles() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.ReferencedDefineRectangularRoiAlgorithm

Deprecated.

getRed() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

getRedirectDocumentationTarget() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

getRedirectImage(ImagePlus) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Returns the image selected in the "Redirect To:" popup menu of the Analyze/Set Measurements dialog, or null if "None" is selected, the image was not found or the image is not the same size as currentImage.

getRedirectStats(int, Roi) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

getRedoSnapshot() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal

getRedoSnapshot() - Method in class org.hkijena.jipipe.api.history.JIPipeDummyGraphHistoryJournal

getRedoSnapshot() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Gets the snapshot for the next redo operation

getRedoSnapshot() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal

getRedThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

getReferenceCIndex() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistrationAlgorithmRule

getReferenceColumns() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

getReferenceColumns() - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm

getReferenceColumns() - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementMergingAlgorithm

getReferenceModuleInstance() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNode

getReferencePosition() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Video2DExporterRun

getReferenceTextAnnotationColumns() - Method in class org.hkijena.jipipe.api.JIPipeDataBatchGenerationResult

getReferenceTIndex() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistrationAlgorithmRule

getReferenceZIndex() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistrationAlgorithmRule

getRefreshableDirectories() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.CommonDirectoriesProvider

Gets the refreshable directories (like drives or mounted volumes).

getRegexString() - Method in class org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtraction

getRegisteredCategories() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

getRegisteredContextMenuActions() - Method in class org.hkijena.jipipe.desktop.api.registries.JIPipeCustomMenuRegistry

Gets the registered context menu actions

getRegisteredDataTypes() - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Gets all registered data types

getRegisteredExpressionFunctions() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry

Registered expression functions.

getRegisteredExtensionIds() - Method in class org.hkijena.jipipe.JIPipe

getRegisteredExtensionIds() - Method in interface org.hkijena.jipipe.JIPipeService

getRegisteredExtensions() - Method in class org.hkijena.jipipe.JIPipe

getRegisteredExtensions() - Method in interface org.hkijena.jipipe.JIPipeService

getRegisteredItems() - Method in class org.hkijena.jipipe.api.registries.JIPipeUtilityRegistry

Returns a mutable map of all items

getRegisteredMenuExtensions() - Method in class org.hkijena.jipipe.desktop.api.registries.JIPipeCustomMenuRegistry

getRegisteredNodeClasses() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

getRegisteredNodeInfos() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Gets the set of all known algorithms

getRegisteredParameters() - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry

getRegisteredSheets() - Method in class org.hkijena.jipipe.api.registries.JIPipeApplicationSettingsRegistry

getRegisteredSheetTypes() - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectSettingsRegistry

getRegisteredSources() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

getRegisteredTableColumnOperations() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry

The registered column operations.

getRegisteredTemplates() - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry

getRegisteredTools() - Method in class org.hkijena.jipipe.api.registries.JIPipeGraphEditorToolRegistry

getRegistry() - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry.TemplatesUpdatedEvent

getRegistry() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

getRegistry() - Method in interface org.hkijena.jipipe.JIPipeJavaPlugin

Returns the registry

getRegistry() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

getRegistry() - Method in class org.hkijena.jipipe.JIPipeService.ExtensionDiscoveredEvent

getRegistry() - Method in class org.hkijena.jipipe.JIPipeService.ExtensionRegisteredEvent

getRelativeFileNames() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileListDataSource

getRelativeFolderPaths() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderListDataSource

getRelativeInstallationPath() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstaller

Installation path relative to the ImageJ root

getRelativePaths() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathListDataSource

getRelativeX() - Method in enum org.hkijena.jipipe.plugins.parameters.library.roi.Anchor

getRelativeY() - Method in enum org.hkijena.jipipe.plugins.parameters.library.roi.Anchor

getRelevantParameterKeys() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

Finds the parameter keys that are relevant according to the current anchor setting The anchor key 'anchor' is not part of the result.

getRelevantParameterKeys() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

Finds the parameter keys that are relevant according to the current anchor setting The anchor key 'anchor' is not part of the result.

getRelevantParameters() - Method in enum org.hkijena.jipipe.plugins.parameters.library.roi.Anchor

getRemoveExistingAnnotationsFilter() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.OverwriteAnnotations

getRenameFunction() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SimplifyAnnotationsAlgorithm

getRenamingEntries() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameSingleColumnsAlgorithm

getRenamingEntries() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumns2Algorithm

getRenamingEntries() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumnsAlgorithm

Deprecated.

getRenamingEntries() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm

getRenamingItems() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RenameAnnotation

getRenamingItems() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RenameDataAnnotation

getRenderedHTML() - Method in class org.hkijena.jipipe.plugins.parameters.library.markup.MarkdownText

getRenderedHTMLText() - Method in class org.hkijena.jipipe.plugins.parameters.library.markup.MarkdownText

getRendererComponent(JXMultiThumbSlider) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.CustomGradientTrackRenderer

getRendererComponent(JXMultiThumbSlider) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.TrackRenderer

getRendererComponent(JXMultiThumbSlider) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI.TrackRenderer

getRenderFunction() - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopGenericListCellRenderer

getReplacements() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ReplaceLabelsAlgorithm

getReport() - Method in exception org.hkijena.jipipe.api.validation.JIPipeValidationRuntimeException

getReport() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopReloadableValidityChecker

getRepositories() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstaller

This method should return all repositories that are available

getRepositories() - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

getRepository() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryReference

getRequiredLegacyImageViewerPlugins() - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

getRequiredLegacyImageViewerPlugins() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

getRequiredLegacyImageViewerPlugins() - Method in interface org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerOverlay

getResolution() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

getResourceAsStream(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

Gets a plugin-internal resource as stream

getResourceBasePath() - Static method in class org.hkijena.jipipe.utils.ResourceUtils

getResourceClass() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

getResourceClass() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

getResourcePath(String) - Static method in class org.hkijena.jipipe.utils.ResourceUtils

Gets an internal resource.

getResourceURL(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

Gets a plugin-internal resource as URL

getRestrictToChannels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.RemoveLUTAlgorithm

getRestrictToChannels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorMapAlgorithm

getRestrictToChannels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm

getRestrictToChannels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromImageAlgorithm

getRestrictToIndices() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm

getResult() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopExpressionCalculatorUI.ResultItem

getResultMap() - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopCollectTraceRun

getResultsTable() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Returns the default results table.

getRExecutablePath() - Method in class org.hkijena.jipipe.plugins.r.REnvironment

getRho() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.HoughLineSegments.Line

getRhoMax() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.HoughLineSegments.HoughResult

getRhos() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.HoughLineSegments.HoughResult

getRibbon() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow

getRibbon() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableUI

getRibbon() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableUI

getRibbon() - Method in class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopTableEditor

getRibbon() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentPanel

getRidgeThreshold() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXInitializationParameters

getRight() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.OperationNode

getRight() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

getRight() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.InnerMargin

getRight() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

getRightPanelWidth() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

getRightPanelWidth() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.State

getRightSplitPaneRatio() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.State

getRightX() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

getRod() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationParameters

getRoi() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm

getRoi1Settings() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm

getRoi1Settings() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm

getRoi2Settings() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm

getRoi2Settings() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm

getRoiComment() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

getRoiComment() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

getRoiComment() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

getRoiDataAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractROIProfileAlgorithm

getRoiDrawer() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

getRoiDrawer() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageViewerUIROI2DDisplayApplicationSettings

getRoiDrawer() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

getRoiFilterExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.FilteringParameters

GetRoiImageAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert

Wrapper around RoiManager

GetRoiImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.GetRoiImageAlgorithm

Instantiates a new node type.

GetRoiImageAlgorithm(GetRoiImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.GetRoiImageAlgorithm

Instantiates a new node type.

getRoiIndexAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractROIProfileAlgorithm

getRoiIndexColumn() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.SetROI3DMetadataFromTableAlgorithm

getRoiIndexColumn() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetROIMetadataFromTableAlgorithm

getRoiListControl() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

getRoiListControl() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

getRoiManagerPlugin() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3DSelectionContextPanel

getRoiManagerPlugin() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2DSelectionContextPanel

getRoiName() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

getRoiName() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

getRoiName() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

getRoiName() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentCyclesToROIAlgorithm

getRoiName() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode

getRoiName() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertTracksToRoiNode

getRoiName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualLocationROIProperties

getRoiName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualROIProperties

getRoiName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

getRoiName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

getRoiName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

getRoiName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

getRoiName() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

getRoiNameAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractROIProfileAlgorithm

getRoiNameExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

getRoiNameExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

getRoiNameExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LinesHoughDetection2DAlgorithm

getRoiProperties() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm

getRoiProperties() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawOvalRoiAlgorithm

Deprecated.

getRoiProperties() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm

Deprecated.

getRoiProperties() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

getRoiProperties() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

getRoiProperties() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

getRoiProperties() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

getRoiProperties() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

getRoiProperties() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

getRoiProperties(Roi) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Returns the properties of a Roi as map

getRois() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

getRois() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ThresholdingResult

getRois() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.OMEImageData

getRois() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

getRoiToLabelTransformation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm

getRole() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

getRollingBallRadius() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm

getRoot() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

getRotateTemplate() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

getRotationDirection() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm

getRotationRange() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.register.RegisterRoiToImageByBrightnessAlgorithm

getRotations() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm

getRow(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

getRow() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeDataTableDataSource

The data slot row where the data is sourced

getRow() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeResultSlotDataSource

getRow() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeWeakDataTableDataSource

The data slot row where the data is sourced

getRow() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopDataTableRowDisplayUtil

getRow(int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

Returns the location

getRow() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotPreview

getRow() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotRowUI

Returns the data row that is displayed

getRow() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.FormPanelEntry

getRow() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImagePlusResultImportRun

getRow() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.OMEImageResultImportRun

getRow() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

getRow(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

getRow() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.Index

getRow() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.RowBuilder

getRowAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

getRowAsDouble(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.DoubleArrayTableColumnData

getRowAsDouble(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.FloatArrayTableColumnData

getRowAsDouble(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RelabeledTableColumnData

getRowAsDouble(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RowIndexTableColumnData

getRowAsDouble(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.StringArrayTableColumnData

getRowAsDouble(int) - Method in interface org.hkijena.jipipe.plugins.tables.datatypes.TableColumnData

Returns the data entry as double

getRowAsDouble(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ZeroTableColumnData

getRowAsDouble(int) - Method in class org.hkijena.jipipe.plugins.tables.TableColumnDataReference

getRowAsObject(int) - Method in interface org.hkijena.jipipe.plugins.tables.datatypes.TableColumnData

Gets the data at the specified row as object

getRowAsString(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.DoubleArrayTableColumnData

getRowAsString(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.FloatArrayTableColumnData

getRowAsString(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RelabeledTableColumnData

getRowAsString(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RowIndexTableColumnData

getRowAsString(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.StringArrayTableColumnData

getRowAsString(int) - Method in interface org.hkijena.jipipe.plugins.tables.datatypes.TableColumnData

Returns the data entry as string

getRowAsString(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ZeroTableColumnData

getRowAsString(int) - Method in class org.hkijena.jipipe.plugins.tables.TableColumnDataReference

getRowComparator(ResultsTableData) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.MeasurementColumnSortOrder

Creates a comparator for ResultsTableData rows that is equivalent to the column order in this object

getRowCount() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

getRowCount() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

getRowCount() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableInfo

getRowCount() - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantTableModel

getRowCount() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableModel

getRowCount() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

getRowCount() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableModel

getRowCount() - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerTableModel

getRowCount() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextTableModel

getRowCount() - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

getRowCount() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

getRowCount() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

getRowCount_() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

NOT THREAD-SAFE

getRowCountAnnotation() - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm

getRowGenerator() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

getRowList() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

getRowList() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableInfo

getRowList() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

getRowMergingStrategy() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnsToAnnotationsAlgorithm

getRowNormalization() - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSimpleAlgorithm

getRowNormalization() - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm

getRowNormalization() - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementMergingAlgorithm

getRows() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

getRows() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.MontageToStackAlgorithm

getRows() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

getRows() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.DoubleArrayTableColumnData

getRows() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.FloatArrayTableColumnData

getRows() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RelabeledTableColumnData

getRows(Collection<Integer>) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

getRows(int, int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Extracts rows

getRows() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RowIndexTableColumnData

getRows() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.StringArrayTableColumnData

getRows() - Method in interface org.hkijena.jipipe.plugins.tables.datatypes.TableColumnData

Returns the number of rows that are existing (not generated)

getRows() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ZeroTableColumnData

getRows() - Method in class org.hkijena.jipipe.plugins.tables.TableColumnDataReference

getRowSelector() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

getRowSelector() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

getRowStorageFolder() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataAnnotationInfo

This is a relative path pointing to the row storage folder of this data annotation The path is relative to the storage path of the parent data table

getRowStorageFolder(JIPipeDataSlot, JIPipeDataTableRowInfo, JIPipeDataAnnotationInfo) - Static method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotPreview

Returns the folder where the data is stored

getRowStorageFolder() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotRowUI

Returns the folder where the data is stored

getRowStorageFolder() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImagePlusResultImportRun

getRowStorageFolder() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.OMEImageResultImportRun

getRowStoragePath(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot

Gets the storage path of a data row from a result.

getRowStoragePath(Path, int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

Gets the storage path of the specified row

getRowStoragePath() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeResultSlotDataSource

getRScriptExecutablePath() - Method in class org.hkijena.jipipe.plugins.r.REnvironment

getRules() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DReferencedAlgorithm

getRules() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DSingleAlgorithm

getRuleType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistrationAlgorithmRule

getRun() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnable.EnqueuedEvent

getRun() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnable.FinishedEvent

getRun() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnable.InterruptedEvent

getRun() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnable.ProgressEvent

getRun() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnable.StartedEvent

getRun() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableWorker

getRun() - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmSettingsPanel

getRun() - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

getRun() - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRun

The run that runs the pipeline

getRunnable() - Method in class org.hkijena.jipipe.utils.debounce.StaticDebouncer

getRunnerQueue() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue

getRunnerQueue() - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopCompactRunnableQueueButton

getRunnerQueue() - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

getRunSets() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectRunSetsConfiguration

getRunSetsConfiguration() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

getRunSetsConfiguration() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectRunSetsConfiguration.RunSetsModifiedEvent

getRunSetsConfiguration() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopRunSetListCellRenderer

getRuntimeMillis() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableWorker

getRuntimePartition() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

getRuntimePartition(RuntimePartitionReferenceParameter) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun

getRuntimePartition(int) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun

getRuntimePartitionList() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopRuntimePartitionListCellRenderer

getRuntimePartitions() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

getRuntimeProject() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

getRuntimeProject() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the current project associated with the current run

getRunUUID() - Method in class org.hkijena.jipipe.api.AbstractJIPipeRunnable

getRunUUID() - Method in class org.hkijena.jipipe.api.environments.JIPipeExternalEnvironmentInstaller

getRunUUID() - Method in interface org.hkijena.jipipe.api.run.JIPipeRunnable

Unique ID of this run

getRunUUID() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToFilesByMetadataExporterRun

getRunUUID() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToOutputExporterRun

getRunUUID() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToZIPExporterRun

getRunUUID() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun

getSample() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImageJSampleAlgorithm

getSaturatedPixels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm

getSaturationThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

getSavedState() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

getSavedState() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.StateSavedEvent

getScale() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

getScale() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

getScale2DAlgorithm() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm

getScale2DAlgorithm() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

getScaleFactor() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanelImageComponent

getScaleFactor() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopImageFrameComponent

getScaleMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

getScaleMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.ImageParameters

getScaleRange() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.register.RegisterRoiToImageByBrightnessAlgorithm

getScales() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures

getScaleVectorPercentage() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm

getScaleX() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

getScaleX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

getScaleX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

getScaleX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

getScaleX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

getScaleX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ScaleRoiAlgorithm

getScaleX() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

getScaleY() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

getScaleY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

getScaleY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

getScaleY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

getScaleY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

getScaleY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ScaleRoiAlgorithm

getScaleY() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

getScaling() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.SymmetryFilter3DAlgorithm

getScheduledActivatePluginEventEmitter() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

getScheduledActivatePlugins() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

getScheduledDeactivatePluginEventEmitter() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

getScheduledDeactivatePlugins() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

getScheduledRegistrationTasks() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

getScheduledSelection() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getSchemaBasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

getScore() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm.EdgeCandidate

getScore() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm.EdgeCandidate

getScore() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm.EdgeCandidate

getScore() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ThresholdingResult

getScore() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines.HoughLine

getScoreAccumulationExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ScoreParameters

getScoreExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ScoreParameters

getScoreParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

getScoringFunction() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

getScoringFunction() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

getScratchBaseDirectory() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Gets the scratch directory of the current run associated to this algorithm.

getScreen(long, int) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROGateway

getScreenId() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

getScreenIds() - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROScreenReferenceDataSource

getScript() - Method in class org.hkijena.jipipe.plugins.r.algorithms.IteratingRScriptAlgorithm

getScript() - Method in class org.hkijena.jipipe.plugins.r.algorithms.MergingRScriptAlgorithm

getScriptParameters() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ModifyAnnotationScript

getScriptParameters() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SplitByAnnotationScript

getScriptParameters() - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelIterating

getScriptParameters() - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelSimpleIterating

getScriptParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsScriptAlgorithm

getScriptParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge.FilterAndMergeRoiByStatisticsScriptAlgorithm

getScriptParameters() - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.IteratingJythonScriptAlgorithm

getScriptParameters() - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.JythonScriptAlgorithm

getScriptParameters() - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.MergingJythonScriptAlgorithm

getScriptParameters() - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.SimpleIteratingJythonScriptAlgorithm

getScriptParameters() - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.IteratingPythonScriptAlgorithm

getScriptParameters() - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.MergingPythonScriptAlgorithm

getScriptParameters() - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.PythonScriptAlgorithm

getScriptParameters() - Method in class org.hkijena.jipipe.plugins.tables.nodes.ModifyAndMergeTablesScript

getScriptParameters() - Method in class org.hkijena.jipipe.plugins.tables.nodes.ModifyTablesScript

getScriptParameters() - Method in class org.hkijena.jipipe.plugins.tables.nodes.TablesFromScript

getScrollPane() - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantTableModel

getScrollPane() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableModel

getScrollPane() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

getScrollPane() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableModel

getScrollPane() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableUI

getScrollPane() - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerTableModel

getScrollPane() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

getScrollPane() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getScrollPane() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

getScrollPane() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopMarkdownReader

getScrollPane() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

getSearchField() - Method in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopCompendiumUI

getSearchString(ImageJDataExporter) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopImageJDataExporterPicker

getSearchString(ImageJDataImporter) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopImageJDataImporterPicker

getSearchString(JIPipeParameterTypeInfo) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopParameterTypeInfoPicker

getSearchString(T) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopPickerDialog

Gets the search string for the specified icon

getSearchString(JIPipeNodeExample) - Method in class org.hkijena.jipipe.plugins.nodeexamples.JIPipeNodeExamplePickerDialog

getSearchString(T) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicEnumParameter

The search string used for the searchable mode

getSearchStrings() - Method in class org.hkijena.jipipe.desktop.commons.components.search.JIPipeDesktopSearchTextField

Returns the search strings according to the current text

getSecond() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceCube

getSecondary1() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

Returns the secondary 1 color.

getSecondary1() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

Returns the secondary 1 color.

getSecondary2() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

Returns the secondary 2 color.

getSecondary2() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

Returns the secondary 2 color.

getSecondary3() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

Returns the secondary 3 color.

getSecondary3() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

Returns the secondary 3 color.

getSecondColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm

getSeedSegmentationSettings() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm

getSeedSegmentationSettings() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.Watershed3DSegmentationAlgorithm

getSeedsThreshold() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm

getSeedsThreshold() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.Watershed3DSegmentationAlgorithm

getSegmentation() - Method in class org.hkijena.jipipe.plugins.ijweka.datatypes.WekaModelData

getSegmentationImageDataAnnotation() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

getSegmentationMethod() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm.SpotSegmentationSettings

getSegmentationModel() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

getSegmentationOutputSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

getSegmentationOutputSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

getSegmentationOutputSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

getSegmentationOutputSettings() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

getSegmentationOutputSettings() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

getSegmentedChannel() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

getSegmentedChannel() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2ChannelSettings

getSegmentResultsMethod() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

getSelectColorPrompt() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopColorChooserButton

getSelectedColor() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopColorChooserButton

getSelectedColumn() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableColumnToImageAlgorithm

getSelectedDataTypes() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker

getSelectedDataTypesChangedEventEmitter() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker

getSelectedFilamentsOrAll(String, String) - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

getSelectedFile() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

getSelectedFiles() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

getSelectedIcon() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopIconPickerDialog

getSelectedIndices() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.SliceROIListAlgorithm

getSelectedIndices() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2

getSelectedInfo() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddAlgorithmSlotPanel

getSelectedInfo() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddParameterDialog

getSelectedInfo() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopEditAlgorithmSlotPanel

getSelectedInfos() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker

getSelectedInfosChangedEventEmitter() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker

getSelectedItem() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPickDynamicEnumValueDialog

getSelectedItem() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPickEnumValueDialog

getSelectedItem() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopPickerDialog

getSelectedNode() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopPickNodeDialog

getSelectedNodes() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getSelectedOutput() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI

getSelectedPaths() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNext

getSelectedROIOrAll(String, String) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

getSelectedROIOrAll(String, String) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

getSelectedSlot() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.properties.JIPipeDesktopGraphNodeSlotEditorUI

getSelectedSources() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotSeriesEditor

Returns the currently selected sources.

getSelectedSpotsOrAll(String, String) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

getSelectedTab() - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopJIPipeProjectTabMetadata

getSelectedTask() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon

getSelectedTemplate() - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopJIPipeTemplateSelectionUI

getSelectedTracksOrAll(String, String) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

getSelectedValue() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopToggleButtonPanel

Gets the model value of the selected button.

getSelection() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

getSelection() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getSelection() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm

Deprecated.

getSelectionByDialog(Component, Collection<T>, Collection<T>, String, String, ListCellRenderer<T>, ListSelectionMode) - Static method in class org.hkijena.jipipe.utils.UIUtils

Lets the user select one or multiple items from a list

getSelectionContextPanels() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

getSelectionContextPanels() - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

getSelectionContextPanels() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

getSelectionContextPanels() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

getSelectionContextPanels() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

getSelectionFontFamily() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

getSelectionFontSize() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

getSelectionForegroundColor() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

getSelectorUI() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEvent

getSelectTopN() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LinesHoughDetection2DAlgorithm

getSeries() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

getSeriesAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

getSeriesBuilders() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

getSeriesIdsAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm

getSeriesName() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2Algorithm

getSeriesName() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTablesAlgorithm

Deprecated.

getSeriesNamesAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm

getSeriesToImport() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

getSessionId() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItem

getSessionId() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItemCollection

getSessionId() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

getSettingClass() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.io.DefaultSettingsIO

getSettingClass() - Method in interface org.hkijena.jipipe.plugins.ijtrackmate.io.SettingsIO

getSettingClass() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.io.SpotFeaturePenaltyParameterListSettingsIO

getSettings(Class<?>) - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry

Returns the settings instance

getSettings() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

getSettings() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getSettings() - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRun

Settings for this quick run

getSettings() - Static method in class org.hkijena.jipipe.JIPipe

getSettings() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.ModelData

getSettings() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotDetectorData

getSettings() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotTrackerData

getSettings() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

getSettings() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc.RenderJIPipeProjectAlgorithm

getSettings() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

getSettingsIOMap() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo

getSettingsIOMap() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo

getSettingsPanel() - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmSettingsPanelIOEditor

getSettingsSheet(String, Class<T>) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

getSettingsSheet(Class<T>) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

getSettingsSheets() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

getSettingsToParameterMap() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo

getSettingsToParameterMap() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo

getShadowColor() - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopDropShadowRenderer

getShadowOpacity() - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopDropShadowRenderer

getShadowSize() - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopDropShadowRenderer

getShapeData() - Method in class org.hkijena.jipipe.plugins.imagej2.algorithms.CreateIJ2ShapeAlgorithm

getShapeParameters() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.TextBoxAnnotationGraphNode

getShapeType() - Method in class org.hkijena.jipipe.plugins.imagej2.algorithms.CreateIJ2ShapeAlgorithm

getSheetNameAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportResultsTableAlgorithm

getSheetNameExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm

Deprecated.

getSheetNameExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2

getSheets() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportResultsTableAlgorithm

getShortKey() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess

getShortKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess

getShortKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess

getShortKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

getShortKey() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess

Returns a short form of the ID used, for example to generate a parameter string.

getShortKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

getShortKey() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameterItemParameterAccess

getShortKey() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterInputAccess

getShortKey() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterOutputAccess

getShortKey() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterParameterAccess

getShortKey() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

getShortKey() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterKeyAccess

getShortKey() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterValueAccess

getShortKey() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableCellAccess

getShortName() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ColumnOperationEntry

getShortName() - Method in enum org.hkijena.jipipe.utils.ImageJCalibrationMode

getShowAfterMinRuntime() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

getSideBar() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentPanel

getSiftParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationAlgorithm

getSigma() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.AddNoise2DAlgorithm

getSigma() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm

getSigma() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

getSigma() - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaborKernelGenerator

getSigma() - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaussianKernelGenerator

getSigma0X() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm

getSigma0Y() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm

getSigma1X() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm

getSigma1Y() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm

getSigmaColor() - Method in class org.hkijena.jipipe.plugins.opencv.nodes.filters.BilateralFilterAlgorithm

getSigmaSpace() - Method in class org.hkijena.jipipe.plugins.opencv.nodes.filters.BilateralFilterAlgorithm

getSigmaX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.GaussianBlur2DAlgorithm

getSigmaX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm

getSigmaY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.GaussianBlur2DAlgorithm

getSigmaY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm

getSigmaZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionFunction

Returns the signature of the function

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionOperatorEntry

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.ContainsStringPredicateFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.control.IfElseExprFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.control.IfElseFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.GlobStringPredicateFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.EqualsStringPredicateFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.ExtractRegexMatchesFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.RegexStringPredicateFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringEndsWithPredicateFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringFirstIndexOfFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringJoinFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringLastIndexOfFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringRegexReplaceFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringReplaceFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringSliceBeforeFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringSliceFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringSplitFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringStartsWithPredicateFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringToLowerCaseFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringToUpperCaseFunction

getSignature() - Method in class org.hkijena.jipipe.plugins.expressions.functions.string.StringTruncateFunction

getSilencedPlugins() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry.Settings

getSimplifiedMinimalDependencies() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

getSingletonTabInstances() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

getSingletonTabs() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

getSize() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeRemoteArtifact

getSize() - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail

getSize() - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

getSize() - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

getSize() - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaussianKernelGenerator

getSizeAnnotation() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotateWithPathProperties

getSizeC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateZeroImage

getSizeC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateFromMathExpression2D

getSizeC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

getSizeC() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageDimensions

getSizeInfo() - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderPackage

getSizeInfo() - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage

getSizeT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateZeroImage

getSizeT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateFromMathExpression2D

getSizeT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

getSizeT() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageDimensions

getSizeZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateZeroImage

getSizeZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateFromMathExpression2D

getSizeZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

getSizeZ() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageDimensions

getSlice(TableColumnData, List<Integer>) - Static method in interface org.hkijena.jipipe.plugins.tables.datatypes.TableColumnData

Returns a new table column that contains the selected rows in the provided order

getSliceAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ImageToTableAlgorithm

getSliceAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.MultipleImagesToTableAlgorithm

getSliceAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.HistogramGenerator

getSliceBaseNames() - Method in class org.hkijena.jipipe.plugins.cellpose.utils.CellposeImageInfo

getSliceCLocation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.Merge2DToHyperstackAlgorithm

getSliceFilter() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontage2Algorithm

getSliceIndex(int) - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

getSliceIndex(int) - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

getSliceRange() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.DataSlicer

getSliceRange() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.IterationStepSlicer

getSliceStats(ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

getSlicesToImport() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

getSliceTLocation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.Merge2DToHyperstackAlgorithm

getSliceZero(ImagePlus, ImageSliceIndex) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Gets slice from image

getSliceZero(ImagePlus, int, int, int) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Gets slice from image

getSliceZeroSafe(ImagePlus, ImageSliceIndex) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Gets slice from image.

getSliceZeroSafe(ImagePlus, int, int, int) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Gets slice from image Will not trigger an IndexOutOfBoundsException

getSliceZLocation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.Merge2DToHyperstackAlgorithm

getSlicingMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.FrangiVesselnessFeatures

getSlot(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableInfo

Gets the slot that defined the specified row

getSlot() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeResultSlotDataSource

getSlot() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph.GCEvent

getSlot() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

getSlot() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotPreview

getSlot() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotRowUI

Returns the data slot

getSlot() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImagePlusResultImportRun

getSlot() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.OMEImageResultImportRun

getSlotActiveArea(JIPipeDataSlot) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

getSlotConfiguration() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Gets the slot configuration

getSlotConfigurationChangedEventEmitter() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

getSlotConfigurationChangedEventEmitter() - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration

Emits events when the slots change

getSlotCount() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

getSlotEdges() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns all edges as set of edges

getSlotFilter() - Method in class org.hkijena.jipipe.plugins.parameters.api.graph.SlotMapParameterCollection

getSlotLabel() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

getSlotList() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

getSlotLocation(JIPipeDataSlot) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Returns the UI location of a data slot that is located in the graph

getSlotLocation(JIPipeDataSlot) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

Returns the location of a slot in relative coordinates

getSlotName() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeCachedDataSlotDataSource

getSlotName() - Method in class org.hkijena.jipipe.api.validation.contexts.GraphNodeSlotValidationReportContext

getSlotName() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

getSlotName() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

getSlotName() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm

getSlotNodes() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

getSlots() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

getSlots() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun

getSlotStatus() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

getSlotStoragePath() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot

Gets the storage path that is used during running the algorithm for saving the results This is not used during project creation

getSlotStore(int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

Gets the slot that defined the specified row

getSlotTable(Collection<JIPipeDataSlotInfo>) - Static method in class org.hkijena.jipipe.utils.TooltipUtils

Creates a slot definition table.

getSlotType() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot

getSlotType() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

getSlotType() - Method in class org.hkijena.jipipe.api.validation.contexts.GraphNodeSlotValidationReportContext

getSlotType() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUIAddSlotButtonActiveArea

getSlotType() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

getSmallerMajor() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.connections.JIPipeDesktopRectangularLine

getSmallerMinor() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.connections.JIPipeDesktopRectangularLine

getSmartEdgeSlotBackground() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getSmartEdgeSlotForeground() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getSmoothing() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.HessianFeatureAlgorithm

getSmoothing() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.StructureFeatureAlgorithm

getSmoothing() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.Hessian2DAlgorithm

Deprecated.

getSmoothing() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

getSmoothingScale() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DerivativesFeaturesAlgorithm

getSmoothness() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry

getSmoothness() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

getSnakePointSpacing() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXInitializationParameters

getSnapshotQueue() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

getSnapshots() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal

getSnapshots() - Method in class org.hkijena.jipipe.api.history.JIPipeDummyGraphHistoryJournal

getSnapshots() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Gets the list of all snapshots.

getSnapshots() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal

getSolution() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry

getSortedAndFilteredData(Collection<T>, Function<T, String>, RankingFunction<T>, String[]) - Static method in class org.hkijena.jipipe.utils.search.RankedData

Creates a list of sorted ranked data

getSortedDisplayOperationsFor(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Gets all import operations for a data type ID

getSortedImportOperationsFor(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Gets all import operations for a data type ID

getSortedList(Collection<Class<? extends JIPipeData>>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData

Gets name sorted list of data classes

getSortedList(Set<JIPipeNodeInfo>) - Static method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

Gets a sorted list of algorithms

getSortedOutputNodes() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

getSortedRegisteredTemplates() - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry

getSortingLabelExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

getSortingLabelGenerator() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

getSortLabel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelledImage

getSortOrder() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm

getSortOrder() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm

getSortOrder() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.SortRowsByExpressionAlgorithm.SortEntry

getSortOrderList() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm

Deprecated.

getSortOrderList() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2

getSortOrderList() - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.SortTableRowsAlgorithm

getSortOrderList() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.SortRowsByAnnotationsAlgorithm

getSource() - Method in interface org.hkijena.jipipe.api.data.context.JIPipeDataContext

The ID of the creator of this context

getSource() - Method in class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext

getSource() - Method in class org.hkijena.jipipe.api.environments.JIPipeEnvironment

getSource() - Method in class org.hkijena.jipipe.api.events.AbstractJIPipeEvent

getSource() - Method in interface org.hkijena.jipipe.api.events.JIPipeEvent

The source of the event (set during the creation of the event)

getSource() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess

getSource() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

getSource() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeConnectedEvent

getSource() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeDisconnectedEvent

getSource() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphConnection

getSource() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.UserParameterDefinition

getSource() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess

getSource() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess

getSource() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

getSource() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess

Gets the object that holds the parameter

getSource() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

getSource() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.ConnectHighlight

getSource() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

getSource() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm.EdgeCandidate

getSource() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm.EdgeCandidate

getSource() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm.EdgeCandidate

getSource() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameterItemParameterAccess

getSource() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterInputAccess

getSource() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterOutputAccess

getSource() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterParameterAccess

getSource() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

getSource() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterKeyAccess

getSource() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterValueAccess

getSource() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableCellAccess

getSourceActions(JComponent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodeTransferHandler

getSourceActions(JComponent) - Method in class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplateBoxTransferHandler

getSourceAnnotationFilter() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.OverwriteAnnotations

getSourceArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm

getSourceArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm

getSourceArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator

getSourceArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator

getSourceArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

getSourceArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator

getSourceArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm

getSourceArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm

getSourceArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm

getSourceArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm

getSourceArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm

getSourceArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm

getSourceArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm

getSourceCenter() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

getSourceCollapsed(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Gets information about if the source is collapsed

getSourceColumn() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumns2Algorithm.RenamingEntry

getSourceColumnName() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.IntegratingColumnOperationEntry

getSourceDocumentation(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Gets source documentation

getSourceDocumentationName(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Gets source name

getSourceImageIndex() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo.Entry

getSourceInfo() - Method in class org.hkijena.jipipe.api.nodes.JIPipeNodeExample

An additional info label used by the UI.

getSourceKey(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Gets unique source key

getSourceNode() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphConnection

getSourceNode(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Returns the node of a collection

getSourceOf(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Returns the source that registered that data type

getSourceOf(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Returns the source that registered that data type

getSourceOf(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Returns the source of a registered algorithm

getSourcePoint() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

getSourcePoints() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo.Entry

getSourcePointsAsArray() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo.Entry

getSourceRow() - Method in class org.hkijena.jipipe.plugins.cellpose.utils.CellposeImageInfo

getSourceRow() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.IndexedDoublePoint

getSources() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisconnectHighlight

getSourceUI() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

getSourceUIOrder(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Gets source UI order

getSourceVertexFilter() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

getSourceVertexFilter() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

getSourceWrapMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression

getSpan() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData

getSpan() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData

getSpan() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData

getSpan() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.RectangleImageJ2ShapeData

getSpatialLocation() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

getSpatialLocationInUnit(String) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

getSplashIcons() - Method in interface org.hkijena.jipipe.JIPipeJavaPlugin

Returns icons that will be displayed in the splash screen.

getSplashIcons() - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePlugin

getSplashIcons() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPlugin

getSplashIcons() - Method in class org.hkijena.jipipe.plugins.core.CorePlugin

getSplashIcons() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.TrackMatePlugin

getSplashIcons() - Method in class org.hkijena.jipipe.plugins.ijweka.WekaPlugin

getSplashIcons() - Method in class org.hkijena.jipipe.plugins.ilastik.IlastikPlugin

getSplashIcons() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2Plugin

getSplashIcons() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesPlugin

getSplashIcons() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPlugin

getSplashIcons() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePlugin

getSplashIcons() - Method in class org.hkijena.jipipe.plugins.opencv.OpenCvPlugin

getSplashIcons() - Method in class org.hkijena.jipipe.plugins.python.CorePythonPlugin

getSplashIcons() - Method in class org.hkijena.jipipe.plugins.r.RPlugin

getSplitCharacter() - Method in class org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtraction

getSplitMode() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNode

getSplitPickedIndex() - Method in class org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtraction

getSpotDetectorFactory() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotDetectorData

getSpotDetectorFactory() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo

getSpotDetectors() - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackMateUtils

getSpotDrawer() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

getSpotDrawer() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SpotsToRGBNode

getSpotDrawer() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUISpotsDisplayApplicationSettings

getSpotFeature(Spot, String, double) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotsCollectionData

Gets a feature of a spot.

getSpotFeatureRange(String) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotsCollectionData

Returns the range of values for a feature.

getSpots() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotsCollectionData

getSpotsCollection() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

getSpotSegmentationSettings() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm

getSpotsListControl() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

getSpotsManagerPlugin() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D.SelectionContextPanel

getSpotTrackerFactory() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo

getSpotTrackers() - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackMateUtils

getStackAssignments() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm

getStackIndexInSingleChannel(ImagePlus, int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsAlgorithm

Deprecated.

getStackOrder() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

getStackOrder() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

getStackOrder() - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

getStackPosition() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

The overall stack position of the ROIs.

getStackSizeAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

getStackSizeAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

getStandardErrorLabel() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

Returns a standard error label that simplifies the creation of cache windows.

getStart() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry

getStartAt() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Reslicer

getStartBoundary() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm.HistogramBin

getStartedEventEmitter() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

getStartPointSelectorFunction() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FindLinearFilamentVertexOrderAlgorithm

getStartSlice() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm

getState() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopCheckBoxRibbonAction

getState() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopToggleButtonRibbonAction

getState() - Method in class org.hkijena.jipipe.utils.CustomStateLessToggleButton

getStateSavedEventEmitter() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

getStaticContentPanel() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

The panel that surrounds the scroll pane or content panel

getStaticDirectories() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.CommonDirectoriesProvider

Gets the static directories that should always be present.

getStaticFieldValue(String, Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

Gets the value of a field

getStatistics() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.Measurement3DSettings

getStatistics() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MeasurementDrawerPlugin2D.Settings

getStatistics() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.Measurement2DSettings

getStatistics(List<ResultsTableData.IntegratingColumnOperationEntry>, Set<String>) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Generates a new table that contains statistics.

getStatisticsParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

getStatus() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnable.ProgressEvent

getStatus() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Hough_Circle

getStatus() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

getStatusMessage() - Method in class org.hkijena.jipipe.plugins.batchassistant.DataBatchStatusData

getStatusUpdatedEventEmitter() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

getStepSize() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.NumberRangeParameterGenerator

getStepsPerScale() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SIFTParameters

getStitchThreshold() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationThresholdSettings_Old

Deprecated.

getStitchThreshold() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationThresholdSettings

getStitchThreshold() - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationThresholdSettings

getStopSlice() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm

getStopThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

getStorageDataTablePath() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot

Only valid for slots generated by a JIPipeGraphRun.

getStorageDocumentation(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData

Returns the storage documentation for the data type or null if none was provided.

getStorageDocumentation() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo

getStoragePath() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

The storage path is used in JIPipeGraphRun to indicate where output data is written This is only used internally

getStoragePath() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

getStorageSchema(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData

Returns the URL pointing to a JSON schema that describes the storage of the data type.

getStorageSchema() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo

getStore() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEvent

getStoredEventEmitter() - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache

getStoredEventEmitter() - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache

getStoredGridLocation() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

getStretchFactor() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

getStringBuilder() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.RebuildReportRun

getStringFromClipboard() - Static method in class org.hkijena.jipipe.utils.UIUtils

Returns a string from clipboard or an empty string

getStringRepresentation() - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore

getStringValue() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.StringOrDouble

getStrokeColor() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer

getStrokeColor() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

getStrokeColorEdgeFeature() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

getStrokeColorFeature() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer

getStrokeColorMode() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

getStrokeColorTrackFeature() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

getStrokeDefault() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getStrokeDefaultBorder() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getStrokeHighlight() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getStrokeWidth() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer

getStrokeWidth() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

getStructureElement() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.AlternatingMorphologicalFilters2DAlgorithm

getStructureElement() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalFeatureContrast2DAlgorithm

getStructureElement() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalTextureContrast2DAlgorithm

getStructureTensorParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm

getStructureTensorParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

getStructureTensorParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm

getStyle() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction

getStyleSheet() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Convenience method to get the StyleSheet.

getSubFolder() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListFiles

getSubFolder() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListSubfolders

getSubPath() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ConcatenateByParameter

getSuffix() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.TemporaryFileDataSource

getSuggestedName() - Method in class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment

getSumColumnName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator

getSummary() - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

getSummary() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

A short summary

getSuppressStripesMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter

getT() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

getT() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndices

getTab() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.TabRenamedEvent

getTab() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.FormData.TabSettings

getTabAnnotation() - Method in class org.hkijena.jipipe.plugins.forms.algorithms.IteratingFormProcessorAlgorithm

getTabAnnotation() - Method in class org.hkijena.jipipe.plugins.forms.algorithms.MergingFormProcessorAlgorithm

getTabAnnotation() - Method in class org.hkijena.jipipe.plugins.forms.algorithms.SimpleIteratingFormProcessorAlgorithm

getTabAnnotation() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.FormData.TabSettings

getTabAreaBounds() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPane

getTabbedPane() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

getTabComponent() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.DocumentTab

getTabContainingContent(Component) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Returns the tab that contains the specified content

getTabContainingTabComponent(Component) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Returns the tab that contains the specified tab component

getTabCount() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

getTabLabelShiftX(int, int, boolean) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

Overridden to do nothing for the Java L&F.

getTabLabelShiftY(int, int, boolean) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

Overridden to do nothing for the Java L&F.

getTable() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableUI

getTable() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotPreview

getTable() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerTextAnnotationsPanel.Renderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantDataTableUI.BatchIndexCellRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantDataTableUI.WrapperColumnHeaderRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataViewerAnnotationInfoPanel.Renderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopDataInfoCellRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableUI.WrapperColumnHeaderRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableUI.MultiDataSlotTableColumnRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerDataTableUI.WrapperColumnHeaderRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopAnnotationTableCellRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopDataSlotTableColumnHeaderRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopMergedDataSlotTableColumnHeaderRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopNodeTableCellRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopProjectCompartmentTableCellRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopRowDataAnnotationMergedTableCellRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopRowDataAnnotationTableCellRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopRowDataMergedTableCellRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopRowDataTableCellRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopRowIndexTableCellRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextDateTableCellRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextPathTableCellRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextSizeTableCellRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopComponentCellRenderer

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.plugins.forms.ui.DataBatchStatusTableCellRenderer

getTableColumn() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column

getTableColumnOperationsOfType(Class<? extends ColumnOperation>) - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry

Returns all operations that are assignable to the filter class

getTableData() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.RowBuilder

getTableMergeSettings() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithAnnotationTable

getTableModel() - Method in class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopTableEditor

getTableModelEvent() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ModelChangedEvent

getTableOperationRegistry() - Method in class org.hkijena.jipipe.JIPipe

getTableOperationRegistry() - Method in interface org.hkijena.jipipe.JIPipeService

getTableOperations() - Static method in class org.hkijena.jipipe.JIPipe

getTableRow() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataAnnotationInfo

getTables() - Method in class org.hkijena.jipipe.plugins.tables.nodes.DefineTablesAlgorithm

getTabPane() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon

getTabPane() - Method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersDataViewerPanel

getTabPanelBorder() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

getTabPlacement() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

getTabRenamedEventEmitter() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.DocumentTab

getTabRunOverlay(int) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

getTabs() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

getTabsContaining(Class<? extends Component>) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Returns all tabs that contain components of provided type or components that inherit from it

getTabSettings() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.FormData

getTagExporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.manage.OMEROCreateDatasetAlgorithm

getTagExporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROImageToDatasetAlgorithm

getTagListAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.parameters.AnnotationsToOMEROTagExporter

getTags(MetadataFacility, SecurityContext, DataObject) - Static method in class org.hkijena.jipipe.plugins.omero.util.OMEROUtils

getTagsToListAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.parameters.OMEROTagToAnnotationImporter

getTagsToListFilter() - Method in class org.hkijena.jipipe.plugins.omero.parameters.OMEROTagToAnnotationImporter

getTagToAnnotationImporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm

getTagToAnnotationImporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm

getTagToAnnotationImporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROPlateReferenceAlgorithm

getTagToAnnotationImporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm

getTagToAnnotationImporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

getTagToAnnotationImporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

getTagToAnnotationImporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROImageAlgorithm

getTagToAnnotationImporter() - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROTableAlgorithm

getTarget() - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata

getTarget() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeConnectedEvent

getTarget() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeDisconnectedEvent

getTarget() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphConnection

getTarget() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterCollectionContextAction

getTarget() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.ConnectHighlight

getTarget() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisconnectHighlight

getTarget() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

getTarget() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm.EdgeCandidate

getTarget() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm.EdgeCandidate

getTarget() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm.EdgeCandidate

getTargetArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnnotateByImageStatisticsExpressionAlgorithm

getTargetArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm

getTargetArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm

getTargetArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm

getTargetArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.MergeImagesAlgorithm

getTargetArea() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.SimpleImageAndRoiIteratingAlgorithm

getTargetC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm

getTargetC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ReorderRoiDimensionsAlgorithm

getTargetCenter() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

getTargetChannel() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerLUTEditor

getTargetChannel() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerOpacityLUTEditor

getTargetColumnName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ImageToTableColumnAlgorithm

getTargetColumnName() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.IntegratingColumnOperationEntry

getTargetDimension() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm

getTargetDimension() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackCombinerAlgorithm

getTargetDimensionAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm

getTargetImageIndex() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo.Entry

getTargetNode() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphConnection

getTargetNodeCopies() - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRun

getTargetNodes() - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRun

getTargetPackage() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstaller

getTargetPackage() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerDialog

getTargetPackages() - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderUI

getTargetPackages() - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderDialog

getTargetPoint() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

getTargetPoints() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo.Entry

getTargetPointsAsArray() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo.Entry

getTargetSlots() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SplitByAnnotation

getTargetT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm

getTargetT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ReorderRoiDimensionsAlgorithm

getTargetTabIndex(Point) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPane

getTargetUI() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

getTargetVertexFilter() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

getTargetVertexFilter() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

getTargetZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm

getTargetZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ReorderRoiDimensionsAlgorithm

getTaskLabel() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryApplyInstallUninstallRun

getTaskLabel() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryInstallArtifactRun

getTaskLabel() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryInstallManuallyRun

getTaskLabel() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryUninstallArtifactRun

getTaskLabel() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryUpdateCachedArtifactsRun

getTaskLabel() - Method in class org.hkijena.jipipe.api.backups.CollectBackupsRun

getTaskLabel() - Method in class org.hkijena.jipipe.api.backups.DeleteOldBackupsRun

getTaskLabel() - Method in class org.hkijena.jipipe.api.backups.PruneBackupsRun

getTaskLabel() - Method in class org.hkijena.jipipe.api.cache.JIPipeCacheClearAllRun

getTaskLabel() - Method in class org.hkijena.jipipe.api.cache.JIPipeCacheClearOutdatedRun

getTaskLabel() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation.ImportDataRun

getTaskLabel() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGenerationRun

getTaskLabel() - Method in class org.hkijena.jipipe.api.InlinedJIPipeRunnable

getTaskLabel() - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseBuilderRun

getTaskLabel() - Method in class org.hkijena.jipipe.api.project.JIPipeArchiveProjectToDirectoryRun

getTaskLabel() - Method in class org.hkijena.jipipe.api.project.JIPipeArchiveProjectToZIPRun

getTaskLabel() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun

getTaskLabel() - Method in interface org.hkijena.jipipe.api.run.JIPipeRunnable

A name for the runnable

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow.DownloadFullDataRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataExporterRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToFilesByMetadataExporterRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToOutputExporterRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToZIPExporterRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.cache.importers.JIPipeDesktopImportCachedSlotOutputRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopCollectTraceRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.ReloadListRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopLegacyAddNodePanel.ReloadListRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.nodefinder.JIPipeDesktopNodeFinderDialogUI.ReloadListRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.RebuildReportRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.plugins.artifactsmanager.JIPipeDesktopApplyPluginManagerRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopLoadResultDirectoryIntoCacheRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopLoadResultZipIntoCacheRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopSaveProjectAndCacheToDirectoryRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopSaveProjectAndCacheToZipRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeExtractTemplateZipFileRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRun

getTaskLabel() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun

getTaskLabel() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImagePlusResultImportRun

getTaskLabel() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.OMEImageResultImportRun

getTaskLabel() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.RawImage2DExporterRun

getTaskLabel() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Stack2DExporterRun

getTaskLabel() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Stack2DRendererRun

getTaskLabel() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Video2DExporterRun

getTaskLabel() - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderRun

getTaskLabel() - Method in class org.hkijena.jipipe.plugins.pipelinerender.RenderPipelineRun

getTaskLabel() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectCondaEnvPythonInstaller

getTaskLabel() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectSystemPythonInstaller

getTaskLabel() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectVirtualEnvPythonInstaller

getTaskLabel() - Method in class org.hkijena.jipipe.plugins.scene3d.utils.Scene3DToColladaExporter

getTasks() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon

getTasksFinishedLabel() - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

getTaskSingleEnqueuedRunningLabel() - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

getTaskSingleRunningLabel() - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

gettAxis() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm

getTempDirectory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

getTemplate() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

getTemplate() - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionFunction

Returns a template function that can be used to get users started

getTemplate() - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionOperatorEntry

getTemplate() - Method in class org.hkijena.jipipe.plugins.parameters.library.collections.ParameterCollectionList

Returns the template object for new items

getTemplateBasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

getTemplateDescription() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

getTemplateFile() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectTemplate

getTemplateMap() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OMEAccessorStorage

getTemplateMatchingMethod() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

getTemplatesUpdatedEventEmitter() - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry

getTemporaryBaseDirectory() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

getTemporaryBaseDirectory() - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

getTemporaryDirectory(String) - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

Generates a temporary directory

getTemporaryDocument() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopMarkdownReader

getTemporaryFile(String, String) - Static method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

Generates a temporary directory

getTesseractOCREnvironment(JIPipeProject, OptionalTesseractOCREnvironment) - Static method in class org.hkijena.jipipe.plugins.ijocr.OCRPlugin

getText() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData

getText() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData

getText() - Method in enum org.hkijena.jipipe.api.notifications.JIPipeNotificationAction.Style

getText() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyPasswordField

getText() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyReadOnlyTextArea

getText() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyReadOnlyTextField

getText() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyTextField

getText() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopReadonlyCopyableTextField

getText() - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopGenericListCellRenderer.RenderedItem

getText() - Method in class org.hkijena.jipipe.desktop.commons.components.search.JIPipeDesktopSearchTextField

getText() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

getTextAnnotation(int, int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets an annotation at a specific index

getTextAnnotation(int, String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets an annotation at a specific column

getTextAnnotationColumnArray_(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets the annotation column or creates it DOES NOT ENSURE that the output size is equal to getRowCount() NOT THREAD-SAFE, REQUIRES A WRITE LOCK!

getTextAnnotationColumnNames() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

getTextAnnotationColumns() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

getTextAnnotationColumns() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

getTextAnnotationFilter() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PullDataTableAnnotations

getTextAnnotationFilter() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PushDataTableAnnotations

getTextAnnotationMap(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Returns annotations of a row as map

getTextAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableArchive

getTextAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableDirectory

getTextAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PullDataTableAnnotations

getTextAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PushDataTableAnnotations

getTextAnnotationMergeMode() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.ImportJIPipeSlotFolderAlgorithm

getTextAnnotationOr(int, String, JIPipeTextAnnotation) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Returns the annotation of specified type or the alternative value.

getTextAnnotations(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets the list of annotations for a specific data row

getTextAnnotations(Collection<Integer>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Gets the list of annotations for specific data rows

getTextAnnotations() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableRowInfo

getTextArea() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyReadOnlyTextArea

getTextColor() - Method in class org.hkijena.jipipe.plugins.core.nodes.JIPipeCommentNode

getTextColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings

getTextColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

getTextColor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings

getTextContent() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode

getTextDescription(StringBuilder, UUID, Map<UUID, Integer>, int) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Gets a description of the graph as text

getTextDescription(StringBuilder) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Gets a description of the node as text

getTextDescription() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeCustomTextDescriptionParameter

Gets the parameter as custom text description

getTextDescription() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

getTextDescription(StringBuilder, int) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Gets a description of the project as text

getTextDescription() - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

getTextDescription() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameter

getTextDescription() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameter

getTextDescription() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameter

getTextDescription() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRange

getTextDescriptionOf(Object) - Static method in interface org.hkijena.jipipe.api.parameters.JIPipeCustomTextDescriptionParameter

Get the text description of an object.

getTextField() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyReadOnlyTextField

getTextField() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyTextField

getTextField() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopReadonlyCopyableTextField

getTextField() - Method in class org.hkijena.jipipe.desktop.commons.components.search.JIPipeDesktopSearchTextField

getTextLocation() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode

getTextProcessor() - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.ProcessTextDataAlgorithm

getTextSettings() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

getTextSettings() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

getTextTitle() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode

getTheme() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

getTheme() - Static method in class org.hkijena.jipipe.utils.UIUtils

getThemeFromRawSettings() - Static method in class org.hkijena.jipipe.utils.UIUtils

getTheta() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.HoughLineSegments.Line

getTheta() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines.HoughLine

getTheta() - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaborKernelGenerator

getThetas() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

getThetas() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

getThetas() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.HoughLineSegments.HoughResult

getThreadPool() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNodeRunContext

Gets the thread pool for parallelization

getThreads() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.RunJIPipeProjectAlgorithm

getThreshold() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.binary.DistanceMap3DAlgorithm

getThreshold() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.binary.ErodedVolumeFraction3DAlgorithm

getThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

getThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm

getThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm

getThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.MaskToRoiAlgorithm

getThreshold(JIPipeExpressionVariablesMap, ImageStatistics, boolean, TShortArrayList) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters

getThreshold(JIPipeExpressionVariablesMap, ImageStatistics, boolean, TFloatArrayList) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters

getThreshold(JIPipeExpressionVariablesMap, ImageStatistics, boolean, TByteArrayList) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters

getThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ThresholdingResult

getThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm

getThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm

getThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm

getThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm

getThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters

getThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm

getThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters

getThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm

getThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters

getThresholdAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm

getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm

getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm

getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm

getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm

getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm

getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm

getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm

getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm

getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm

getThresholdCalculationExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm

getThresholdCalculationExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters

getThresholdCalculationExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm

getThresholdCalculationExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters

getThresholdCalculationExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm

getThresholdCalculationExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters

getThresholdCombinationExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm

getThresholdCombinationExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm

getThresholdCombinationExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters

getThresholdCombinationExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm

getThresholdCombinationExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters

getThresholdCombinationExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm

getThresholdCombinationExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters

getThresholdCombinationExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

getThresholdCriteriaExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.FilteringParameters

getThresholdMask(ImageProcessor, float) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageJAlgorithmUtils

getThresholdMethod() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

getThresholdMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm

getThresholdMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm

getThresholdMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm

getThresholdMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm

getThresholdMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm

getThresholdMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm

getThresholdMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm

getThresholdParameters() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

getThresholdParameters() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

getThresholdParameters() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

getThresholdParameters() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

getThresholdParameters() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

getThresholdParameters() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

getThresholdRegression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

getThresholds() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

getThumbnail() - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore

Gets the currently stored thumbnail

getThumbnailGeneratedEventEmitter() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue

getThumbnails() - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata

getThumbRendererComponent(JXMultiThumbSlider, int, boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.CustomGradientThumbRenderer

getThumbRendererComponent(JXMultiThumbSlider, int, boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.ThumbRenderer

getThumbRendererComponent(JXMultiThumbSlider, int, boolean) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI.ThumbRenderer

getTightenedTo(PointRange, Point) - Static method in class org.hkijena.jipipe.utils.PointRange

Gets a point within the range that is closest to the target point

getTightenedTo(PointRange, PointRange) - Static method in class org.hkijena.jipipe.utils.PointRange

Gets a point within the range that is closest to the target point range

getTileHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

getTileInsetXAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

getTileInsetXAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

getTileInsetXAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm

getTileInsetYAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

getTileInsetYAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

getTileInsetYAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm

getTileOverlap() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationPerformanceSettings_Old

Deprecated.

getTileRealXAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

getTileRealXAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

getTileRealXAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm

getTileRealYAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

getTileRealYAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

getTileRealYAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm

getTileSizeX() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling2DSettings

getTileSizeX() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling3DSettings

getTileSizeX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

getTileSizeX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

getTileSizeY() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling2DSettings

getTileSizeY() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling3DSettings

getTileSizeY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

getTileSizeY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

getTileSizeZ() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling3DSettings

getTileWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

getTileXAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

getTileXAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

getTileYAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

getTileYAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

getTilingParameters() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaClassification3DAlgorithm

getTilingSettings() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaClassification2DAlgorithm

GetTimeHoursFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.datetime

GetTimeHoursFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.datetime.GetTimeHoursFunction

GetTimeMinutesFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.datetime

GetTimeMinutesFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.datetime.GetTimeMinutesFunction

getTimeout() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.SleepAlgorithm

getTimePerFrame() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Video2DExporterRun

getTimer() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopAnimatedIcon

getTimer() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.SpinnerIcon

GetTimeSecondsFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.datetime

GetTimeSecondsFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.datetime.GetTimeSecondsFunction

getTitle() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

getTitle() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry

getTitle() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.DocumentTab

getTitle() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.SingletonTab

getTitle() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

getTitleAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

getTitleAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

getTitleAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

getTitleAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImagePlusAlgorithm

getTitleAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROImageAlgorithm

getTitleFilterExpression() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ResultsTableFromGUI

getTitleFontSize() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

getTitleLabel() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.DocumentTabComponent

getTitleStyle() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode

getToggledEventEmitter() - Method in class org.hkijena.jipipe.utils.CustomStateLessToggleButton

getToken(int) - Method in class org.hkijena.jipipe.api.nodes.database.WeightedTokens

getTokenList(Segment, int, int) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluatorSyntaxTokenMaker

getTokenList(Segment, int, int) - Method in class org.hkijena.jipipe.plugins.r.ui.RTokenMaker

Returns the first token in the linked list of tokens generated from text.

getTokens() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewCompartmentNodeDatabaseEntry

getTokens() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

getTokens() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

getTokens() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

getTokens() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

getTokens() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

getTokens() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry

getTolerance() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm

getToleranceOfDirectionPercentage() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter

getTool() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

getToolBar() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

Returns the toolbar that contains

getToolBar() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel

getToolBar() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopLegacyAddNodePanel

getToolBar() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentPanel

getToolBar() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

getToolBar() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopUserFriendlyErrorUI

getToolBar() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopMarkdownReader

getToolBar() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.algorithms.TrackmateLegacyCacheDataViewerWindow

getToolBar() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.trackscheme.TrackSchemeLegacyCacheDataViewerWindow

getToolBar() - Method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersLegacyDataViewerWindow

getToolBar() - Method in class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplateBox

getToolBar() - Method in class org.hkijena.jipipe.plugins.strings.TextLegacyCacheDataViewerWindow

getToolBar() - Method in class org.hkijena.jipipe.plugins.tables.display.TableViewerLegacyCacheDataViewerWindow

getToolbarWithLabelsWidth() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

getToolbarWithoutLabelsWidth() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

getToolChangedEventEmitter() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

getToolCursor() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.EllipseMaskDrawer2DTool

getToolCursor() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.FloodFillMaskDrawer2DTool

getToolCursor() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MouseMaskDrawer2DTool

getToolCursor() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PencilMaskDrawer2DTool

getToolCursor() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PolygonMaskDrawer2DTool

getToolCursor() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.RectangleMaskDrawer2DTool

getToolCursor() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIPicker2DTool

getToolCursor() - Method in interface org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2DTool

Cursor for the tool

getToolInfoDistance() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

getToolName() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawer2DTool

getToolName() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIPicker2DTool

getToolName() - Method in interface org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2DTool

Name of the tool

getTools() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

getTooltip() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

getTooltip() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool

getTooltip() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

getTooltip() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool

getTooltip() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

getTooltip() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

getTooltip(Object) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm.IterationModeEnumInfo

getTooltip() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

getTooltip(Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeColumnMatchingEnumInfo

getTooltip() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction

getTooltip(Object) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.PretrainedCellposeModelEnumItemInfo

getTooltip(Object) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelColorMapEnumItemInfo

getTooltip(Object) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.BitDepthEnumItemInfo

getTooltip(Object) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.OptionalBitDepthEnumItemInfo

getTooltip(Object) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.PretrainedOmnipose0ModelEnumItemInfo

getTooltip(Object) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DefaultEnumItemInfo

getTooltip(Object) - Method in interface org.hkijena.jipipe.plugins.parameters.api.enums.EnumItemInfo

Extracts a custom tooltip for the enum value

getTooltip(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.colors.ColorMapEnumItemInfo

getTooltip(Object) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeDesktopArtifactQueryParameterEditorUI.ArtifactEnumItemInfo

getTooltip(Object) - Method in class org.hkijena.jipipe.plugins.plots.utils.ColorMapEnumItemInfo

getTooltip(Object) - Method in class org.hkijena.jipipe.plugins.r.algorithms.ImportRDatasetAlgorithm.DatasetEnumItemInfo

getToolTipText(float, float, Shape) - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

For images the tooltip text comes from text specified with the ALT attribute.

getTop() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

getTop() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.InnerMargin

getTop() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

getTotalOverlapAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm

getTrack() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.layout.MSTGraphAutoLayoutImplementation.Node

getTrackAnnotationName() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

getTrackAnnotationName() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXResultAnalysisAlgorithm

getTrackBackgroundGenerator() - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI.TrackRenderer

getTrackDisplayMode() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

getTrackDrawer() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

getTrackDrawer() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.TracksToRGBNode

getTrackDrawer() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUITracksDisplayApplicationSettings

getTrackerFactory() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotTrackerData

getTrackFeature(int, String, double) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

Gets a feature from a track.

getTrackFeatureRange(String) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

Returns the range of values for a feature.

getTrackIDAnnotation() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode

getTrackIds() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

getTrackModel() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

getTracksCollection() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

getTracksListControl() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

getTracksManagerPlugin() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D.SelectionContextPanel

getTrackSpots(int) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

getTrainingFeatures() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature2DSettings

getTrainingFeatures() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature3DSettings

getTransferData(DataFlavor) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneTabTransferable

getTransferDataFlavors() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneTabTransferable

getTransformation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyMathExpression2DAlgorithm

getTransformation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyTransform2DAlgorithm

getTransformation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm

getTransformation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyApplyMath2DAlgorithm

Deprecated.

getTransformation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegResult

getTransformationType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DReferencedAlgorithm

getTransformationType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DSingleAlgorithm

getTransformationType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo.Entry

getTransformedTargetImage() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegResult

getTree() - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchTree

getTree() - Method in class org.hkijena.jipipe.desktop.app.cache.cachetree.JIPipeDesktopCacheTreePanel

getTree() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCacheBrowserUI

getTree() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultAlgorithmTree

getTree() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterAccessTreeUI

getTree() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopProjectOutputTreePanel

getTreeCellRendererComponent(JTree, Object, boolean, boolean, boolean, int, boolean) - Method in class org.hkijena.jipipe.desktop.app.backups.JIPipeDesktopBackupManagerTreeCellRenderer

getTreeCellRendererComponent(JTree, Object, boolean, boolean, boolean, int, boolean) - Method in class org.hkijena.jipipe.desktop.app.cache.cachetree.JIPipeDesktopCacheStateTreeCellRenderer

getTreeCellRendererComponent(JTree, Object, boolean, boolean, boolean, int, boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.properties.JIPipeDesktopDataSlotTreeCellRenderer

getTreeCellRendererComponent(JTree, Object, boolean, boolean, boolean, int, boolean) - Method in class org.hkijena.jipipe.desktop.app.parameterreference.JIPipeDesktopParameterReferenceGroupCollectionTreeCellRenderer

getTreeCellRendererComponent(JTree, Object, boolean, boolean, boolean, int, boolean) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopResultTreeCellRenderer

getTreeCellRendererComponent(JTree, Object, boolean, boolean, boolean, int, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterAccessTreeUI.Renderer

getTreeCellRendererComponent(JTree, Object, boolean, boolean, boolean, int, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterKeyPickerUI.ParameterTreeCellRenderer

getTreeComponent() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterAccessTreeUI

getTrueDataType() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataAnnotationInfo

ID of the data type stored in this data annotation

getTrueDataType() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableRowInfo

getTrueString() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.BooleanFormData

getTSOAXEnvironment(JIPipeProject, OptionalTSOAXEnvironment) - Static method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsPlugin

getTweaksSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

getTweaksSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

getTweaksSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

getTweaksSettings() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

getTweaksSettings() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

getTweaksSettings() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

getType() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryReference

getType() - Method in class org.hkijena.jipipe.api.data.browser.JIPipeDataBrowser.UpdatedEvent

getType() - Method in class org.hkijena.jipipe.api.data.browser.JIPipeDataTableBrowser.UpdatedEvent

getType() - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderPackage

getType() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.CommonDirectory

getType() - Method in class org.hkijena.jipipe.desktop.commons.components.parameters.JIPipeDesktopDynamicParameterEditorDialog.ParameterEntry

getType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm

getType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm.Entry

getType() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column

getType() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column

getType() - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage

getType() - Method in class org.hkijena.jipipe.plugins.opencv.nodes.ConvertTypeAlgorithm

getType() - Method in class org.hkijena.jipipe.plugins.python.PythonEnvironment

getTypeAnnotation() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotateWithPathProperties

getTypeAnnotation() - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

getTypeInfo(HDF5DataSetInformation) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.Hdf5Utils

getTypeName() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.BitDepth

getTypeName() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.OptionalBitDepth

getTypeName(opencv_core.Mat) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

getTypes() - Method in class org.hkijena.jipipe.plugins.expressions.ParameterInfo

getUi() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.layout.MSTGraphAutoLayoutImplementation.Node

getUi() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI.DefaultNodeUIActionRequestedEvent

getUi() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI.NodeUIActionRequestedEvent

getUiAllowedParameterTypes() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeParameterTypeInfoRef

Non-serialized list of allowed parameter types.

getUIControlStyleType() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

Returns the "style" of the control.

getUIControlStyleType() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListDesktopParameterEditorUI

getUIControlStyleType() - Method in class org.hkijena.jipipe.plugins.parameters.library.collections.DesktopParameterCollectionListEditorUI

getUIControlStyleType() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanDesktopParameterEditorUI

getUIForResultSlot(JIPipeDesktopProjectWorkbench, JIPipeDataSlot, JIPipeDataTableRowInfo) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Generates a UI for a result data slot

getUIInputSlotIcon(String) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

getUIInputSlotIcon(String) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

getUIInputSlotIcon(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

An icon that is displayed on the right-hand side of the input slot Can be null

getUIInputSlotIconBaseDimensions(String) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

getUIInputSlotIconBaseDimensions(String) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

getUIInputSlotIconBaseDimensions(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Size of the icon returned by getUIInputSlotIcon Should be at most 16x16 Defaults to 12x12

getUIManhattanDistance() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

getUIOrder() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory

getUIOrder() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess

getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory

getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory

getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory

getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory

getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory

getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory

getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory

getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory

getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory

getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory

getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory

getUIOrder() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory

Categories are sorted by this value (lower value = first)

getUIOrder() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess

getUIOrder() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess

getUIOrder() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

getUIOrder() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess

Controls how the parameter is ordered within the user interface

getUiOrder() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

getUIOrder() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

getUIOrder() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsNodeTypeCategory

getUIOrder() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameterItemParameterAccess

getUIOrder() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterInputAccess

getUIOrder() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterOutputAccess

getUIOrder() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterParameterAccess

getUIOrder() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

getUIOrder() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterKeyAccess

getUIOrder() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterValueAccess

getUIOrder() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableCellAccess

getUiOrder() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

getUiRestrictToCompartments() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection

getUiShape() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphEdge

getUISlot() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotButtonActiveArea

getUISourceOrder(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Gets source UI order

getUiVisibility() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphEdge

getUMeans() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Returns an array containing the first 20 uncalibrated means.

getUnconnectedSlots() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

getUndoSnapshot() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal

getUndoSnapshot() - Method in class org.hkijena.jipipe.api.history.JIPipeDummyGraphHistoryJournal

getUndoSnapshot() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Gets the snapshot for the next undo operation

getUndoSnapshot() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal

getUnhiddenRegisteredDataTypes() - Static method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Returns a collection of all unhidden slot data types

getUnhiddenRegisteredDataTypes() - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Gets all data types that are not hidden

getUniqueKey(JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Gets the unique key of an parameter access

getUniqueStringByDialog(Component, String, String, Predicate<String>) - Static method in class org.hkijena.jipipe.utils.UIUtils

Continuously asks for an unique string

getUniqueValues() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm.HistogramBin

getUnit() - Method in class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

getUpdatedEventEmitter() - Method in interface org.hkijena.jipipe.api.data.browser.JIPipeDataBrowser

Gets the emitter for the updated event

getUpdatedEventEmitter() - Method in class org.hkijena.jipipe.api.data.browser.JIPipeLocalDataBrowser

getUpdatedEventEmitter() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox

getUpdatedEventEmitter() - Method in class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry

getUpdater() - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase

getUpdateSiteDependencies() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

getUpdateSiteDependenciesParameter() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

getUpperThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

getUriList() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.URIListDataSource

getUrl() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryReference

getUrl() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeRemoteArtifact

getUrl() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

getUrl() - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderPackage

getUrl() - Method in class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency

getUrl() - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage

getUrl() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROAnnotationReferenceData

getUrl() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMERODatasetReferenceData

getUrl() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROImageReferenceData

getUrl() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROPlateReferenceData

getUrl() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROProjectReferenceData

getUrl() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

getUrl() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

getUrlMultiPart() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

getUrls() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.DownloadFilesDataSource

getUseOutlinePaintForWhiskers() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Returns the flag that, if true, causes the whiskers to be drawn using the series outline paint.

getUser() - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROGateway

getUserDirectoriesSettings() - Method in class org.hkijena.jipipe.desktop.app.settings.project.JIPipeDesktopMergedProjectSettings

getUserName() - Method in class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment

getUtilitiesFor(Class<?>) - Method in class org.hkijena.jipipe.api.registries.JIPipeUtilityRegistry

getUtilityRegistry() - Method in class org.hkijena.jipipe.JIPipe

getUtilityRegistry() - Method in interface org.hkijena.jipipe.JIPipeService

getUuid() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentEdge

getUuid() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

getUuidCache() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectRunSetsConfiguration

getUUIDInParentGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns the UUID within the current graph.

getUUIDOf(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Gets the UUID of a node

getValidationExpression() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.DoubleFormData

getValidationExpression() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.IntegerFormData

getValidationExpression() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

getValidationExpression() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.StringFormData

getValidRuntimePartitionIndex(int) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun

getValue() - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

getValue(String, Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Gets a parameter value

getValue() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

getValue() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterKeyPickerUI.ParameterEntry

getValue() - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionConstant

getValue() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.NumberNode

getValue() - Method in class org.hkijena.jipipe.plugins.expressions.TableColumnSourceExpressionParameter

getValue() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.BooleanFormData

getValue() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.DoubleFormData

getValue() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.EnumFormData

getValue() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.IntegerFormData

getValue() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

getValue() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.StringFormData

getValue() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

getValue() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

getValue() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.utils.FilamentEdgeMetadataEntry

getValue() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.utils.FilamentsVertexMetadataEntry

getValue() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

getValue() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeatureFilterParameter

getValue() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeatureFilterParameter

getValue() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.ByteConstantValueImageJ2OutOfBoundsFactoryData

getValue() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.DoubleConstantValueImageJ2OutOfBoundsFactoryData

getValue() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.FloatConstantValueImageJ2OutOfBoundsFactoryData

getValue() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.IntegerConstantValueImageJ2OutOfBoundsFactoryData

getValue() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.LongConstantValueImageJ2OutOfBoundsFactoryData

getValue() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.ShortConstantValueImageJ2OutOfBoundsFactoryData

getValue() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking.SetToValueAlgorithm

getValue() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyApplyMath2DAlgorithm

Deprecated.

getValue() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm.MetadataProperty

getValue() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator.GeneratedColumn

getValue() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ConcaveHullMoreiraSantos.Pair

getValue() - Method in enum org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D.MaskColor

getValue() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicEnumParameter

getValue() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameter

getValue() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRange

getValue() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.StringOrDouble

Returns the current value

getValue() - Method in class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

getValue() - Method in class org.hkijena.jipipe.plugins.strings.datasources.StringDefinitionDataSource

getValue() - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2.Entry

getValue() - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnConversionParameter

getValue() - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnIntegrationParameter

getValue() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.SortRowsByExpressionAlgorithm.SortEntry

getValue() - Method in class org.hkijena.jipipe.utils.scripting.MacroSetting

getValueAsDouble(int, int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Returns a table value as double.

getValueAsDouble(int, String) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Returns a table value as double

getValueAsString(int, int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Returns a table value as string

getValueAsString(int, String) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Returns a table value as string

getValueAt(int, int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Returns the data.

getValueAt(int, int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

getValueAt(int, int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableInfo

getValueAt(int, int) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantTableModel

getValueAt(int, int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableModel

getValueAt(int, int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

getValueAt(int, int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableModel

getValueAt(int, int) - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerTableModel

getValueAt(int, int) - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextTableModel

getValueAt(int, int) - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

getValueAt(int, int) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

getValueAt(int, int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

getValueAxisFontSize() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CategoryJFreeChartPlotData

getValueAxisFontSize() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

getValueAxisLabel() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CategoryJFreeChartPlotData

getValueAxisLabel() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

getValueAxisMaximum() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CategoryJFreeChartPlotData

getValueAxisMaximum() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

getValueAxisMinimum() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CategoryJFreeChartPlotData

getValueAxisMinimum() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

getValueBackups() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

getValueClass() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameter

getValueColumn() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm

getValueColumn() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.UnMeltTableAlgorithm

getValueColumns() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.MeltTableAlgorithm

getValueFilter() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm

getValueFilter() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

getValueMethod() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

getValues() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByIdAlgorithm

getValues() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column

getValues() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetParameter

getValues() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm.HistogramBin

GetVariableFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.variables

GetVariableFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.variables.GetVariableFunction

GetVariableKeysFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.variables

GetVariableKeysFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.variables.GetVariableKeysFunction

getVariableName() - Method in enum org.hkijena.jipipe.plugins.r.algorithms.ImportRDatasetAlgorithm.Dataset

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.JIPipeCustomAnnotationMatchingExpressionVariables

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByExpression.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SetSingleAnnotation.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.expressions.AnnotationGeneratorExpressionVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.expressions.AnnotationQueryExpressionVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.expressions.custom.JIPipeCustomExpressionVariablesParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.expressions.DataAnnotationQueryExpressionVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.expressions.DataRowQueryExpression.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in interface org.hkijena.jipipe.plugins.expressions.JIPipeExpressionVariablesInfo

Returns the list of known variables for the user interface.

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeProjectDirectoriesVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.expressions.NumberQueryExpressionVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.expressions.NumericFunctionExpression.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.expressions.SingleExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.expressions.StringQueryExpressionVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.expressions.TableCellExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.expressions.TableCellValueExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.expressions.TableColumnSourceExpressionParameter.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.expressions.TableColumnValuesExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.expressions.variables.JIPipeTextAnnotationsExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.expressions.variables.PathFilterExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.expressions.variables.UndefinedExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.expressions.WindowQueryExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.ij3d.utils.AllROI3DMeasurementExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.ij3d.utils.AllROI3DRelationMeasurementExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurementExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurementExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.AllFilamentComponentVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.AllFilamentEdgeVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.AllFilamentVertexVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentComponentVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentEdgeVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentEndpointsVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentUnconnectedEdgeVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertexVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotFeatureVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackFeatureVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackSpotFeatureVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConditionalInverterAlgorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression2DAlgorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression3DAlgorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelOverlapStatisticsVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.RoiOverlapStatisticsVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm.GraphPostprocessingVariables

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ThresholdsExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.AlignedImage5DSliceIndexExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Image5DSliceIndexExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.ImageQueryExpressionVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ColorPixel5DExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.GreyscalePixel5DExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.Image5DExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImagePlusPropertiesExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageStatistics5DExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.LocalPixelCoordinate5DExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.AllMeasurementExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.MeasurementExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.PixelCoordinate2DExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.PixelCoordinate5DExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.VectorPixel2DExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.VectorPixel5DExpressionParameterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRange.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTablesAlgorithm.VariablesInfo

Deprecated.

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.processes.ProcessEnvironment.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.python.PythonEnvironment.PythonArgumentsVariablesInfo

getVariables() - Method in class org.hkijena.jipipe.plugins.r.algorithms.IteratingRScriptAlgorithm

getVariables() - Method in class org.hkijena.jipipe.plugins.r.algorithms.MergingRScriptAlgorithm

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.r.REnvironment.RArgumentsVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.tables.nodes.filter.FilterTablesAlgorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm.CounterVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm.DefaultValuesVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm.VariablesInfo

Deprecated.

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.ProcessEnvironmentVariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.RunExpressionAlgorithm.VariablesInfo

getVariables(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.utils.EnvironmentVariablesSource

GetVariablesAsMapFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.variables

GetVariablesAsMapFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.variables.GetVariablesAsMapFunction

GetVariableValuesFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.variables

GetVariableValuesFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.variables.GetVariableValuesFunction

getvBarHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

getVectorDimension() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.Warp2DAlgorithm

getVectorFieldType() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm

getVersion() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

getVersion() - Method in class org.hkijena.jipipe.api.environments.JIPipeEnvironment

getVersion() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

getVersionComponents(String) - Static method in class org.hkijena.jipipe.utils.VersionUtils

getVersionRevision() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

getVersionString(Class<?>) - Static method in class org.hkijena.jipipe.utils.VersionUtils

Returns a version string for a class

getVersionWithoutRevision() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

getVertexMask() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

getVertexMask() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

getVertexMask() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ErodeEndVerticesAlgorithm

getVertexMask() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm

getVertexMask() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.RemoveVertexValueBackupsAlgorithm

getVertexMask() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.RestoreVertexValueBackupAlgorithm

getVertexMask() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexRadiusFromImageAlgorithm

getVertexMask() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexValueFromImageAlgorithm

getVertexMask() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm

getVerticalBarSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

getVerticalBarSize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

getVerticalLabel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings

getVerticalLabel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings

getVertices() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DIndexedMeshGeometry

getVertices() - Method in interface org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DMeshGeometry

getVertices() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DUnindexedMeshGeometry

getVerticesIndex() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DIndexedMeshGeometry

getVerticesIndex() - Method in interface org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DMeshGeometry

getVerticesIndex() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DUnindexedMeshGeometry

getViewedImage(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

The image used by viewers

getViewerPanel() - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D.SelectionContextPanel

getViewerPanel() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D.SelectionContextPanel

getViewerPanel() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D.SelectionContextPanel

getViewerPanel() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

getViewerPanel() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2DSelectionContextPanel

getViewerPanel() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Stack2DExporterRun

getViewerPanel() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Stack2DRendererRun

getViewerPanel() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Video2DExporterRun

getViewerPanel2D() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin2D

getViewerPanel2D() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

getViewerRunnerQueue() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

getViewFactory() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditorKit

getViewMode() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getViewMode() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

getViewPort() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopZoomViewPort.ZoomChangedEvent

getVirtualData(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Deprecated.

use getDataItemStore

getVirtualDataAnnotation(int, String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Deprecated.

use getDataAnnotationItemStore

getVirtualDataAnnotationMap(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Deprecated.

use getDataAnnotationItemStoreMap

getVirtualEnvDirectory() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectVirtualEnvPythonInstaller.Configuration

getVisibilities() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.State

getVisibility() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewCompartmentNodeDatabaseEntry

getVisibility() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

getVisibility() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

getVisibility() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

getVisibility() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

getVisibility() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

getVisibility() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry

getVisibleCompartmentUUIDsOf(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Gets the compartment UUIDs where the node is also visible inside

getVisibleNodes() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getVisibleParameters() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionVisibilities

getVisitors() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterChangedEvent

getVisitors() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterStructureChangedEvent

getVisitors() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterUIChangedEvent

getvLabel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

getVolumeSimilarityAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm

getVoxelsThreshold() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.Watershed3DSegmentationAlgorithm

getWatchdog() - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog.CancelledEvent

getWebclientUrl() - Method in class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment

getWebsite() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

getWebsite() - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

getWebsite() - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderPackage

getWebsite() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

getWebsite() - Method in class org.hkijena.jipipe.plugins.JIPipePrepackagedDefaultJavaPlugin

getWebsite() - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage

getWeight(int) - Method in class org.hkijena.jipipe.api.nodes.database.WeightedTokens

getWeight() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.layout.MSTGraphAutoLayoutImplementation.Edge

getWeight() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm

getWeightColumn() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm

getWeightColumn() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

getWeightDecay() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

getWeightDecay() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2TrainingTweaksSettings

getWeightDecay() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

getWeightDecay() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTrainingTweaksSettings

getWeightedCount() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm.HistogramBin

getWeights() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.distribute.DistributeDataRandomlyByPercentageAlgorithm

getWell(long, int) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROGateway

getWellId() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

getWellIds() - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROWellReferenceDataSource

getWellType() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

getWhiskerWidth() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Returns the width of the whiskers as fraction of the bar width.

getWidth() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeEmptyThumbnailData

getWidth() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData

getWidth() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData

getWidth() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData

getWidth() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData

getWidth() - Method in interface org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailData

The width if hasSize() is true Otherwise, will return 0

getWidth() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGenerationRun

getWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap

getWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateZeroImage

getWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateFromMathExpression2D

getWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

getWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegImage

Return the full-size image width.

getWidth() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

getWidth() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageDimensions

getWidth() - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

getWidth() - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

getWidth() - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaborKernelGenerator

getWidth() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

getWidthAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

getWidthAnnotation() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

getWindow() - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

getWindow() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopDummyWorkbench

getWindow() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

getWindow() - Method in interface org.hkijena.jipipe.desktop.app.JIPipeDesktopWorkbench

Returns the window

getWindow() - Method in class org.hkijena.jipipe.desktop.commons.events.WindowClosedEvent

getWindow() - Method in class org.hkijena.jipipe.desktop.commons.events.WindowOpenedEvent

getWindowFor(JIPipeProject) - Static method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

Tries to find the window that belongs to the provided project

getWordsToHighlight() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluatorSyntaxTokenMaker

getWordsToHighlight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.FastImageArithmeticsAlgorithm.FastImageArithmeticsTokenMaker

getWorkbench() - Method in class org.hkijena.jipipe.api.environments.JIPipeExternalEnvironmentInstaller

getWorkbench() - Method in interface org.hkijena.jipipe.api.JIPipeWorkbenchAccess

getWorkbench() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

getWorkbench() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow

getWorkbench() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopGraphEditorToolBarButtonExtension

getWorkbench() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI.InitializationParameters

getWorkbench() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCacheManagerUI

getWorkbench() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopDataTableRowDisplayUtil

getWorkbench() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

getWorkbench() - Method in class org.hkijena.jipipe.desktop.app.components.JIPipeDesktopAuthorProfileButton

getWorkbench() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getWorkbench() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbenchPanel

getWorkbench() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopWorkbenchPanel

getWorkbench() - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopInvalidProjectDependenciesInfoDialog

getWorkbench() - Method in class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunNextWindow

getWorkbench() - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsButton

getWorkbench() - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopCompactRunnableQueueButton

getWorkbench() - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

getWorkbench() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNext

getWorkbench() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentWorkbenchPanel

getWorkbench() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopUserFriendlyErrorUI

getWorkbench() - Method in class org.hkijena.jipipe.desktop.commons.components.parameters.JIPipeDesktopDynamicParameterEditorDialog

getWorkbench() - Method in class org.hkijena.jipipe.desktop.commons.notifications.JIPipeDesktopGenericNotificationButton

getWorkbench() - Method in class org.hkijena.jipipe.desktop.commons.notifications.JIPipeDesktopNotificationButton

getWorkbench() - Method in class org.hkijena.jipipe.plugins.forms.ui.FormsDialog

getWorkbench() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImagePlusResultImportRun

getWorkbench() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.OMEImageResultImportRun

getWorkbench() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

getWorkbench() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

getWorkbench() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

getWorkbench() - Method in class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplatePopupMenu

getWorkbench() - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderRun

getWorkbench() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI.ExternalEditor

getWorkDirectory() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Gets the folder where the project is currently working in

getWorkDirectory() - Method in class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

getWorker() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnable.EnqueuedEvent

getWorker() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnable.FinishedEvent

getWorker() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnable.InterruptedEvent

getWorker() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnable.ProgressEvent

getWorker() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnable.StartedEvent

getWorkload() - Method in class org.hkijena.jipipe.desktop.api.nodes.JIPipeDesktopNodeQuickAction

getWrapMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.Warp2DAlgorithm

getWrapped() - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.SettingsSheetWrapper

getWrappedGraph() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

getWrappedGraph() - Method in class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents

getWrappedStream() - Method in class org.hkijena.jipipe.utils.UnclosableInputStream

getWrappedStream() - Method in class org.hkijena.jipipe.utils.UnclosableOutputStream

getWriteToAnnotation() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.RunExpressionAlgorithm

getWriteToAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.RunExpressionAlgorithm

getX() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.Point3d

getX() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2dParameter

getX() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2iParameter

getX() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3dParameter

getX() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3iParameter

getX() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint

getX1() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm.Entry

getX1() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromExpressionsAlgorithm

getX2() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm.Entry

getX2() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromExpressionsAlgorithm

getxAxis() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.CanvasEqualizer

getxAxis() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm

getxAxis() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm

getxAxis() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

getxAxis() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm

getxAxisFontSize() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

getxAxisLabel() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

getxAxisMaximum() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

getxAxisMinimum() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

getXGradient() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegImage

Return the full-size horizontal gradient of the image, if available.

getXMax(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

getXMin(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

getxOrder() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DerivativesFeaturesAlgorithm

getxPath() - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.AnnotateWithXPathDataAlgorithm.Entry

getxPath() - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractTextFromXMLAlgorithm

getxPath() - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm.Entry

getXyAnchor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm

getXyAnchor() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

getXYSliceDims(long[]) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.Hdf5Utils

getXyStep() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.register.RegisterRoiToImageByBrightnessAlgorithm

getY() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.Point3d

getY() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2dParameter

getY() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2iParameter

getY() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3dParameter

getY() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3iParameter

getY() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint

getY1() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm.Entry

getY1() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromExpressionsAlgorithm

getY2() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm.Entry

getY2() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromExpressionsAlgorithm

getyAxis() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.CanvasEqualizer

getyAxis() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm

getyAxis() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm

getyAxis() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

getyAxis() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm

getyAxisFontSize() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

getyAxisLabel() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

getyAxisMaximum() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

getyAxisMinimum() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

getYGradient() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegImage

Return the full-size vertical gradient of the image, if available.

getYMax(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

getYMin(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

getyOrder() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DerivativesFeaturesAlgorithm

getZ() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.Point3d

getZ() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

getZ() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndices

getZ() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3dParameter

getZ() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3iParameter

getZ() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint

getzAnnotationName() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAX2DAlgorithm

getzAxis() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm

getzAxis() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm

getZipFile() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectTemplate

getZMax(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

getZMin(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

getZoom() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getZoom() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

getZoom() - Method in interface org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopZoomViewPort

getZoom() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

getZoomBaseSpeed() - Method in class org.hkijena.jipipe.plugins.imageviewer.settings.LegacyImageViewer2DUIApplicationSettings

getZoomChangedEventEmitter() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

getZoomChangedEventEmitter() - Method in interface org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopZoomViewPort

getZoomDynamicSpeed() - Method in class org.hkijena.jipipe.plugins.imageviewer.settings.LegacyImageViewer2DUIApplicationSettings

getZoomedDummyCanvas() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

A dummy ImageCanvas that is needed by some visualization algorithms for magnification It is updated by ImageViewerPanelCanvas2D Please do not make any changes to the display properties here, as the image viewer has its own canvas

getZoomedHitArea() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUIActiveArea

getZoomedHitAreaCenter() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUIActiveArea

getzOrder() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode

getzOrder() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DerivativesFeaturesAlgorithm

GlobalLinesHoughDetection2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect

GlobalLinesHoughDetection2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

GlobalLinesHoughDetection2DAlgorithm(GlobalLinesHoughDetection2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

GlobStringPredicateFunction - Class in org.hkijena.jipipe.plugins.expressions.functions

GlobStringPredicateFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.GlobStringPredicateFunction

goBack() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.FileChooserHistory

Moves back in the history.

goForward() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.FileChooserHistory

Moves forward in the history.

gotoNextRow() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

goToSnapshot(JIPipeHistoryJournalSnapshot, UUID) - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal

goToSnapshot(JIPipeHistoryJournalSnapshot, UUID) - Method in class org.hkijena.jipipe.api.history.JIPipeDummyGraphHistoryJournal

goToSnapshot(JIPipeHistoryJournalSnapshot, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Attempts to go to a specified snapshot

goToSnapshot(JIPipeHistoryJournalSnapshot, UUID) - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal

grabAttentionAnimation() - Method in class org.hkijena.jipipe.desktop.commons.components.search.JIPipeDesktopSearchTextField

GradientStop() - Constructor for class org.hkijena.jipipe.utils.ColorUtils.GradientStop

GradientStop(float, Color) - Constructor for class org.hkijena.jipipe.utils.ColorUtils.GradientStop

GradientStop(ColorUtils.GradientStop) - Constructor for class org.hkijena.jipipe.utils.ColorUtils.GradientStop

GRAPH_TOOL_CURSOR_FONT - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

GraphAnnotationPlugin - Class in org.hkijena.jipipe.plugins.graphannotation

GraphAnnotationPlugin() - Constructor for class org.hkijena.jipipe.plugins.graphannotation.GraphAnnotationPlugin

GraphAnnotationsNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories

GraphAnnotationsNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory

GraphCanvasUpdatedEvent(JIPipeDesktopGraphCanvasUI) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.GraphCanvasUpdatedEvent

GraphCanvasUpdatedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.GraphCanvasUpdatedEventEmitter

GraphChangedEvent(JIPipeGraph) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.GraphChangedEvent

GraphChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.GraphChangedEventEmitter

graphEditorToolBarButtonExtensionsFor(AbstractJIPipeDesktopGraphEditorUI) - Method in class org.hkijena.jipipe.desktop.api.registries.JIPipeCustomMenuRegistry

GraphNodeParameterCollectionReference - Class in org.hkijena.jipipe.api.grouping.parameters

GraphNodeParameterCollectionReference() - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterCollectionReference

GraphNodeParameterReference - Class in org.hkijena.jipipe.api.grouping.parameters

References a parameter in a graph

GraphNodeParameterReference() - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference

Creates a new empty instance

GraphNodeParameterReference(GraphNodeParameterReference) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference

Creates a copy

GraphNodeParameterReference(JIPipeParameterAccess, JIPipeParameterTree) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference

Instantiates with an existing access within a tree

GraphNodeParameterReferenceAccess - Class in org.hkijena.jipipe.api.grouping.parameters

A parameter access that references to another one, but hides the source

GraphNodeParameterReferenceAccess(GraphNodeParameterReference, JIPipeParameterTree, JIPipeParameterCollection, boolean) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess

Creates a new instance

GraphNodeParameterReferenceAccessGroup - Class in org.hkijena.jipipe.api.grouping.parameters

Contains GraphNodeParameterReferenceAccess

GraphNodeParameterReferenceAccessGroup(GraphNodeParameterReferenceGroup) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccessGroup

Creates a new instance

GraphNodeParameterReferenceAccessGroupList - Class in org.hkijena.jipipe.api.grouping.parameters

Contains GraphNodeParameterReferenceAccess

GraphNodeParameterReferenceAccessGroupList(GraphNodeParameterReferenceGroupCollection, JIPipeParameterTree, boolean) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccessGroupList

Creates a new instance

GraphNodeParameterReferenceGroup - Class in org.hkijena.jipipe.api.grouping.parameters

A list of GraphNodeParameterReference.

GraphNodeParameterReferenceGroup() - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup

Creates a new instance

GraphNodeParameterReferenceGroup(GraphNodeParameterReferenceGroup) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup

Creates a copy

GraphNodeParameterReferenceGroupCollection - Class in org.hkijena.jipipe.api.grouping.parameters

Contains a list of GraphNodeParameterReferenceGroup and GraphNodeParameterCollectionReference Stores references to parameters within an JIPipeGraph

GraphNodeParameterReferenceGroupCollection() - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection

Creates a new instance

GraphNodeParameterReferenceGroupCollection(GraphNodeParameterReferenceGroupCollection) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection

Makes a copy

GraphNodeParameterReferenceGroupCollectionDesktopParameterEditorUI - Class in org.hkijena.jipipe.api.grouping.parameters

Editor for GraphNodeParameterReferenceGroupCollection

GraphNodeParameterReferenceGroupCollectionDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollectionDesktopParameterEditorUI

GraphNodeReferenceParameter - Class in org.hkijena.jipipe.plugins.parameters.library.graph

GraphNodeReferenceParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.graph.GraphNodeReferenceParameter

GraphNodeReferenceParameter(GraphNodeReferenceParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.graph.GraphNodeReferenceParameter

GraphNodeReferenceParameter(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.graph.GraphNodeReferenceParameter

GraphNodeReferenceParameter.List - Class in org.hkijena.jipipe.plugins.parameters.library.graph

GraphNodeReferenceParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.graph

GraphNodeReferenceParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.graph.GraphNodeReferenceParameterEditorUI

GraphNodeSlotValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts

GraphNodeSlotValidationReportContext(JIPipeGraphNode, String, JIPipeSlotType) - Constructor for class org.hkijena.jipipe.api.validation.contexts.GraphNodeSlotValidationReportContext

GraphNodeSlotValidationReportContext(JIPipeValidationReportContext, JIPipeGraphNode, String, JIPipeSlotType) - Constructor for class org.hkijena.jipipe.api.validation.contexts.GraphNodeSlotValidationReportContext

GraphNodeValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts

GraphNodeValidationReportContext(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.validation.contexts.GraphNodeValidationReportContext

GraphNodeValidationReportContext(JIPipeValidationReportContext, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.validation.contexts.GraphNodeValidationReportContext

GraphPostprocessingVariables() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm.GraphPostprocessingVariables

GraphUtils - Class in org.hkijena.jipipe.utils

Helper class for graph

GraphValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts

GraphValidationReportContext(JIPipeGraph) - Constructor for class org.hkijena.jipipe.api.validation.contexts.GraphValidationReportContext

GraphValidationReportContext(JIPipeValidationReportContext, JIPipeGraph) - Constructor for class org.hkijena.jipipe.api.validation.contexts.GraphValidationReportContext

GraphWrapperAlgorithmInput - Class in org.hkijena.jipipe.api.grouping

GraphWrapperAlgorithmInput(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.grouping.GraphWrapperAlgorithmInput

GraphWrapperAlgorithmInput(GraphWrapperAlgorithmInput) - Constructor for class org.hkijena.jipipe.api.grouping.GraphWrapperAlgorithmInput

GraphWrapperAlgorithmOutput - Class in org.hkijena.jipipe.api.grouping

GraphWrapperAlgorithmOutput(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.grouping.GraphWrapperAlgorithmOutput

GraphWrapperAlgorithmOutput(GraphWrapperAlgorithmOutput) - Constructor for class org.hkijena.jipipe.api.grouping.GraphWrapperAlgorithmOutput

GRAY - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

GRAY - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

GrayscaleAttributeFiltering2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

GrayscaleAttributeFiltering2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm

GrayscaleAttributeFiltering2DAlgorithm(GrayscaleAttributeFiltering2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm

GrayscaleAttributeFiltering2DAlgorithm.Attribute - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

GrayscaleAttributeFiltering2DAlgorithm.Operation - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

GrayscaleAttributeFiltering3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

GrayscaleAttributeFiltering3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm

GrayscaleAttributeFiltering3DAlgorithm(GrayscaleAttributeFiltering3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm

GrayscaleAttributeFiltering3DAlgorithm.Attribute - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

GrayscaleAttributeFiltering3DAlgorithm.Operation - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

GreyscaleColorSpace - Class in org.hkijena.jipipe.plugins.imagejdatatypes.colorspace

A ColorSpace that indicates that no color space information is set.

GreyscaleColorSpace() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.GreyscaleColorSpace

GreyscaleImageData - Interface in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale

Annotates an image as greyscale image

GreyscalePixel5DExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

Variable source that allows to address x, y, and value

GreyscalePixel5DExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.GreyscalePixel5DExpressionParameterVariablesInfo

GridCoordinates - Class in org.hkijena.jipipe.plugins.ilastik.utils

Iterate over offset and block (cell) dimensions of a grid in the flat, column-major order.

GridCoordinates(CellGrid) - Constructor for class org.hkijena.jipipe.plugins.ilastik.utils.GridCoordinates

GridCoordinates.Block - Class in org.hkijena.jipipe.plugins.ilastik.utils

Container for block offset and block dimensions.

gridHorizontal(Component...) - Static method in class org.hkijena.jipipe.utils.UIUtils

gridToRealLocation(Point, double) - Method in enum org.hkijena.jipipe.desktop.app.grapheditor.JIPipeGraphViewMode

gridToRealSize(Dimension, double) - Method in enum org.hkijena.jipipe.desktop.app.grapheditor.JIPipeGraphViewMode

gridVertical(Component...) - Static method in class org.hkijena.jipipe.utils.UIUtils

GroupBoxAnnotationGraphNode - Class in org.hkijena.jipipe.plugins.graphannotation.nodes

GroupBoxAnnotationGraphNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.graphannotation.nodes.GroupBoxAnnotationGraphNode

GroupBoxAnnotationGraphNode(TextBoxAnnotationGraphNode) - Constructor for class org.hkijena.jipipe.plugins.graphannotation.nodes.GroupBoxAnnotationGraphNode

GroupBoxAnnotationGraphNodeTool - Class in org.hkijena.jipipe.plugins.graphannotation.tools

GroupBoxAnnotationGraphNodeTool() - Constructor for class org.hkijena.jipipe.plugins.graphannotation.tools.GroupBoxAnnotationGraphNodeTool

groupByMenuPath(Collection<Class<? extends JIPipeData>>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData

Groups the data types by their menu path

groupByMenuPaths(Collection<JIPipeNodeTemplate>) - Static method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

groupByMenuPaths(JIPipeNodeTypeCategory, Set<JIPipeNodeInfo>) - Static method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

Gets the registered algorithms, grouped by their menu paths

groupByPosition(boolean, boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

Groups the ROI by their image positions

groupByPosition(boolean, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Groups the ROI by their image positions

groupByReferenceImage() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Groups the ROI by their reference image

GroupHeaderFormData - Class in org.hkijena.jipipe.plugins.forms.datatypes

GroupHeaderFormData() - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.GroupHeaderFormData

GroupHeaderFormData(GroupHeaderFormData) - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.GroupHeaderFormData

GroupHeaderFormGeneratorAlgorithm - Class in org.hkijena.jipipe.plugins.forms.algorithms.generators

GroupHeaderFormGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.generators.GroupHeaderFormGeneratorAlgorithm

GroupHeaderFormGeneratorAlgorithm(GroupHeaderFormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.generators.GroupHeaderFormGeneratorAlgorithm

GroupHeaderPanel(String, Icon, int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.GroupHeaderPanel

GroupingPlugin - Class in org.hkijena.jipipe.api.grouping

Extension for anything that is related to JIPipeGraphWrapperAlgorithm

GroupingPlugin() - Constructor for class org.hkijena.jipipe.api.grouping.GroupingPlugin

GroupNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

GroupNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.GroupNodeUIContextAction

GroupSceneAlgorithm - Class in org.hkijena.jipipe.plugins.scene3d.nodes

GroupSceneAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.scene3d.nodes.GroupSceneAlgorithm

GroupSceneAlgorithm(GroupSceneAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.scene3d.nodes.GroupSceneAlgorithm

groupVerticesByLocation() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

GrowEndVerticesAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

GrowEndVerticesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm

GrowEndVerticesAlgorithm(GrowEndVerticesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm

guessAxes(long[]) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.ImgUtils

Guess axes from image dimensions.

H

handleDefaultAction() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopDataTableRowDisplayUtil

Runs the currently set default action for this data

handleDefaultAction() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopDefaultResultDataSlotRowUI

handleDefaultAction() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotRowUI

Action that is triggered when the user double-clicks on the entry in the table

handleDefaultActionOrDisplayDataAnnotation(int) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopDataTableRowDisplayUtil

Runs the currently set default action for this data.

handleDefaultActionOrDisplayDataAnnotation(int) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopDefaultResultDataSlotRowUI

handleDefaultActionOrDisplayDataAnnotation(int) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotRowUI

Runs the currently set default action for this data.

handlesInput() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.DataSlotModuleInput

handlesInput() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.DataSlotModuleOutput

handlesInput() - Method in interface org.hkijena.jipipe.plugins.imagej2.io.ImageJ2ModuleIO

handlesInput() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.ParameterImageJ2ModuleInput

handlesInput() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput

handlesInput() - Method in class org.hkijena.jipipe.plugins.imagej2.io.ServiceImageJ2ModuleIO

handlesOutput() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.DataSlotModuleInput

handlesOutput() - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.DataSlotModuleOutput

handlesOutput() - Method in interface org.hkijena.jipipe.plugins.imagej2.io.ImageJ2ModuleIO

handlesOutput() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.ParameterImageJ2ModuleInput

handlesOutput() - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput

handlesOutput() - Method in class org.hkijena.jipipe.plugins.imagej2.io.ServiceImageJ2ModuleIO

hasAttachmentOfType(Class<?>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Returns true if there is an attachment of given type

hasCudaSupport() - Static method in class org.hkijena.jipipe.utils.CUDAUtils

hasCycle(DefaultDirectedGraph<V, E>) - Static method in class org.hkijena.jipipe.utils.GraphUtils

hasDataType(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Returns true if the specified data type class is registered

hasDatatypeWithId(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Returns true if there is a data type with given ID

hasDefaultConstructor(Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

Returns true if the class has a default constructor

hasEditorFor(Class<?>) - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry

Returns true if there is an editor for the parameter

hasFlag(int) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

hasGhost - Variable in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPane

hashCode() - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

hashCode() - Method in class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext

hashCode() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo

hashCode() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

hashCode() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference

hashCode() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

hashCode() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification

hashCode() - Method in class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceParameter

hashCode() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry

hashCode() - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

hashCode() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameterVariableInfo

hashCode() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm.EdgeCandidate

hashCode() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm.EdgeCandidate

hashCode() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm.EdgeCandidate

hashCode() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

hashCode() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.Point3d

hashCode() - Method in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetDescription

hashCode() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceCube

hashCode() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

hashCode() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndices

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicEnumParameter

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetParameter

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameter

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameter

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptParameter

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.library.auth.PasswordParameter

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.library.filesystem.FileChooserBookmark

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.library.images.ImageParameter

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLText

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRange

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeParameter

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExporterRef

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImporterRef

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRef

hashCode() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRef

hashCode() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.IndexedDoublePoint

hashCode() - Method in class org.hkijena.jipipe.utils.data.OwningStore

hashCode() - Method in class org.hkijena.jipipe.utils.data.WeakStore

hasInputSlot(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Returns true if there is an input slot with name

hasInputSlot(String) - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration

Return true if there is an input slot with given name

hasInputSlot(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns true if the algorithm contains an input slot with given name.

hasInputSlot(String) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

If the current node info contains a slot with given name

hasInternetConnection() - Static method in class org.hkijena.jipipe.utils.NetworkUtils

hasKnownGlobalAuthor() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

hasNext() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.TokenIterator

hasNodeInfoWithId(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Returns true if the algorithm ID already exists

hasNotifications() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox

hasOutputSlot(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Returns true if there is an output slot with name

hasOutputSlot(String) - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration

Return true if there is an output slot with given name

hasOutputSlot(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Returns true if the algorithm contains an output slot with given name.

hasOutputSlot(String) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

If the current node info contains a slot with given name

hasParameterDataOutputSlot() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

hasSize() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeEmptyThumbnailData

hasSize() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData

hasSize() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData

hasSize() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData

hasSize() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData

hasSize() - Method in interface org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailData

Returns true if the thumbnail data has a specific size

HasVariableFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.variables

HasVariableFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.variables.HasVariableFunction

Hdf5 - Class in org.hkijena.jipipe.plugins.ilastik.utils.hdf5

HDF5DatasetEntryProvider - Class in org.hkijena.jipipe.plugins.ilastik.utils.hdf5

HDF5DatasetEntryProvider(LogService) - Constructor for class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.HDF5DatasetEntryProvider

Hdf5Utils - Class in org.hkijena.jipipe.plugins.ilastik.utils

Hdf5Utils() - Constructor for class org.hkijena.jipipe.plugins.ilastik.utils.Hdf5Utils

height - Variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines

HELP_URL - Static variable in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

Hessian2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Deprecated.

Hessian2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.Hessian2DAlgorithm

Deprecated.

Instantiates a new node type.

Hessian2DAlgorithm(Hessian2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.Hessian2DAlgorithm

Deprecated.

Instantiates a new node type.

HessianFeatureAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

HessianFeatureAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.HessianFeatureAlgorithm

Instantiates a new node type.

HessianFeatureAlgorithm(HessianFeatureAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.HessianFeatureAlgorithm

Instantiates a new node type.

HessianSegmentation2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

Segments using a Hessian

HessianSegmentation2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

HessianSegmentation2DAlgorithm(HessianSegmentation2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

Copies the algorithm

hexStringToColor(String) - Static method in class org.hkijena.jipipe.utils.ColorUtils

Converts a hex color string #RRGGBB or #RRGGBBAA to a color

HexToRGBFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.color

HexToRGBFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.color.HexToRGBFunction

hideErrorUI() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

Instruction to remove the error UI By default, it will hide the standard error label

hideErrorUI() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.algorithms.TrackmateLegacyCacheDataViewerWindow

hideErrorUI() - Method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersLegacyDataViewerWindow

hideErrorUI() - Method in class org.hkijena.jipipe.plugins.strings.TextLegacyCacheDataViewerWindow

hideErrorUI() - Method in class org.hkijena.jipipe.plugins.tables.display.TableViewerLegacyCacheDataViewerWindow

hideSplash() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopSplashScreen

highlightResults(JIPipeDataBatchGenerationResult) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantInputPreviewPanel

highlightResults(JIPipeDataBatchGenerationResult) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantInputPreviewPanelTable

HistogramBin(double, double) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm.HistogramBin

HistogramContrastEnhancerAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast

This class is based on ContrastEnhancer This class is not very portable, so I adapted the code here

HistogramContrastEnhancerAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm

HistogramContrastEnhancerAlgorithm(HistogramContrastEnhancerAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm

HistogramContrastEnhancerAlgorithm.Method - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast

HistogramFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramFunction

HistogramGenerator - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics

Algorithm that generates ResultsTableData as histogram

HistogramGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.HistogramGenerator

Creates a new instance

HistogramGenerator(HistogramGenerator) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.HistogramGenerator

Creates a copy

HistogramGenerator.MultiChannelMode - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics

Available modes that determine which greyscale value is generated if a multi-channel image is provided

HistogramJFreeChartPlotData - Class in org.hkijena.jipipe.plugins.plots.datatypes

Contains data to generate a histogram plot Series table colums: Value (Numeric) Multiple series: Yes

HistogramJFreeChartPlotData() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

Creates a new instance

HistogramJFreeChartPlotData(HistogramJFreeChartPlotData) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

Creates a copy

HistogramJFreeChartPlotData.HistogramType_ - Enum in org.hkijena.jipipe.plugins.plots.datatypes

Available histogram types

HistogramThresholdFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramThresholdFunction(String) - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdFunction

HistogramThresholdHuang - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramThresholdHuang() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdHuang

HistogramThresholdImageJDefault - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramThresholdImageJDefault() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdImageJDefault

HistogramThresholdImageJIsoData - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramThresholdImageJIsoData() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdImageJIsoData

HistogramThresholdIntermodes - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramThresholdIntermodes() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdIntermodes

HistogramThresholdIsoData - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramThresholdIsoData() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdIsoData

HistogramThresholdLi - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramThresholdLi() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdLi

HistogramThresholdMaxEntropy - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramThresholdMaxEntropy() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdMaxEntropy

HistogramThresholdMean - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramThresholdMean() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdMean

HistogramThresholdMinError - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramThresholdMinError() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdMinError

HistogramThresholdMinimum - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramThresholdMinimum() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdMinimum

HistogramThresholdMoments - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramThresholdMoments() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdMoments

HistogramThresholdOtsu - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramThresholdOtsu() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdOtsu

HistogramThresholdPercentile - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramThresholdPercentile() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdPercentile

HistogramThresholdRenyi - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramThresholdRenyi() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdRenyi

HistogramThresholdShanbhag - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramThresholdShanbhag() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdShanbhag

HistogramThresholdTriangle - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramThresholdTriangle() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdTriangle

HistogramThresholdYen - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

HistogramThresholdYen() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.HistogramThresholdYen

HistoryChangedEvent(JIPipeHistoryJournal) - Constructor for class org.hkijena.jipipe.api.history.JIPipeHistoryJournal.HistoryChangedEvent

HistoryChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.history.JIPipeHistoryJournal.HistoryChangedEventEmitter

HorizontalLineImageJ2ShapeData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.shapes

HorizontalLineImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData

HorizontalLineImageJ2ShapeData(HorizontalLineImageJ2ShapeData) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData

HorizontalLineImageJ2ShapeData(HorizontalLineShape) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData

hough(ImageProcessor, List<Double>) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.HoughLineSegments

Hough_Circle - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

Hough_Circle() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Hough_Circle

houghArray - Variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines

houghGlobalLines(ImageProcessor, List<Double>, List<Double>, List<Point>, double, Dimension, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.HoughLineSegments

houghHeight - Variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines

HoughLine(double, double, int, int, float) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines.HoughLine

Initialises the hough line

HoughLineSegments - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

Implementation of Octave's Hough Line segments Based on code by Hartmut Gimpel

HoughLineSegments() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.HoughLineSegments

houghLineSegments(ImageProcessor, List<Double>, List<Double>, List<Point>, double, double, boolean, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.HoughLineSegments

HoughLineSegments.HoughResult - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

HoughLineSegments.Line - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

HoughLinesNMSAlgorithm - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect

houghPeaks(FloatProcessor, int, double, int[], JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.HoughLineSegments

Implementation of Hough Peaks

HoughResult(FloatProcessor, List<Double>, int) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.HoughLineSegments.HoughResult

HSBColorSpace - Class in org.hkijena.jipipe.plugins.imagejdatatypes.colorspace

HSBColorSpace() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.HSBColorSpace

HSBHueTrackBackground - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

HSBHueTrackBackground() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.HSBHueTrackBackground

HSBToLABFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.color

HSBToLABFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.color.HSBToLABFunction

HSBToRGBFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.color

HSBToRGBFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.color.HSBToRGBFunction

HTMLText - Class in org.hkijena.jipipe.plugins.parameters.library.markup

HTMLText() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLText

HTMLText(String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLText

HTMLText(HTMLText) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLText

HTMLText.Deserializer - Class in org.hkijena.jipipe.plugins.parameters.library.markup

HTMLText.Serializer - Class in org.hkijena.jipipe.plugins.parameters.library.markup

HTMLTextDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.markup

Parameter editor for HTMLText

HTMLTextDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLTextDesktopParameterEditorUI

HyperbolicCosineColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a sine function

HyperbolicCosineColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.HyperbolicCosineColumnOperation

HyperbolicSineColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a sine function

HyperbolicSineColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.HyperbolicSineColumnOperation

HyperbolicTangentColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a sine function

HyperbolicTangentColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.HyperbolicTangentColumnOperation

HyperSphereImageJ2ShapeData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.shapes

HyperSphereImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HyperSphereImageJ2ShapeData

HyperSphereImageJ2ShapeData(HyperSphereImageJ2ShapeData) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HyperSphereImageJ2ShapeData

HyperSphereImageJ2ShapeData(HyperSphereShape) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HyperSphereImageJ2ShapeData

HYPERSTACK - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageScienceUtils

HyperstackDimension - Enum in org.hkijena.jipipe.plugins.imagejdatatypes.util

HyperstackDimensionPairParameter - Class in org.hkijena.jipipe.plugins.imagejalgorithms.parameters

HyperstackDimensionPairParameter() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.HyperstackDimensionPairParameter

HyperstackDimensionPairParameter(HyperstackDimension, HyperstackDimension) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.HyperstackDimensionPairParameter

HyperstackDimensionPairParameter(PairParameter<HyperstackDimension, HyperstackDimension>) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.HyperstackDimensionPairParameter

HyperstackDimensionPairParameter.List - Class in org.hkijena.jipipe.plugins.imagejalgorithms.parameters

HyperstackSlicerAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

HyperstackSlicerAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm

HyperstackSlicerAlgorithm(HyperstackSlicerAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm

HysteresisSegmentation3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.segmentation

HysteresisSegmentation3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.HysteresisSegmentation3DAlgorithm

HysteresisSegmentation3DAlgorithm(HysteresisSegmentation3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.HysteresisSegmentation3DAlgorithm

I

ICON_FROM_RESOURCES_CACHE - Static variable in class org.hkijena.jipipe.utils.UIUtils

ICON_INVERTED_FROM_RESOURCES_CACHE - Static variable in class org.hkijena.jipipe.utils.UIUtils

IconRef - Class in org.hkijena.jipipe.plugins.parameters.library.references

Used by JsonNodeInfo to setup icons

IconRef() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.IconRef

Creates a new instance

IconRef(String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.IconRef

IconRef(IconRef) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.IconRef

Copies an instance

IconRef.Deserializer - Class in org.hkijena.jipipe.plugins.parameters.library.references

Deserializes IconRef

IconRef.Serializer - Class in org.hkijena.jipipe.plugins.parameters.library.references

Serializes IconRef

IconRefDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.references

Editor for IconRef

IconRefDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.IconRefDesktopParameterEditorUI

ID - Static variable in class org.hkijena.jipipe.api.compat.DataTableImageJDataExporter

ID - Static variable in class org.hkijena.jipipe.api.compat.DataTableImageJDataImporter

ID - Static variable in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.cellpose.Cellpose2PluginApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.cellpose.Cellpose3PluginApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.cellpose.CellposePluginProjectSettings

ID - Static variable in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironmentApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.filesystem.JIPipeFilesystemPluginApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ImageViewerUIROI3DDisplayApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.ijfilaments.settings.FilamentsPluginProjectSettings

ID - Static variable in class org.hkijena.jipipe.plugins.ijfilaments.settings.ImageViewerUIFilamentDisplayApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.ijfilaments.settings.TSOAXApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.ijocr.settings.OCRPluginProjectSettings

ID - Static variable in class org.hkijena.jipipe.plugins.ijocr.settings.TesseractOCRApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUISpotsDisplayApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUITracksDisplayApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginProjectSettings

ID - Static variable in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesProjectSettings

ID - Static variable in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageViewerUIROI2DDisplayApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.imageviewer.settings.ImageViewerGeneralUIApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.imageviewer.settings.LegacyImageViewer2DUIApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.napari.NapariPluginApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.omero.OMEROPluginApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.omero.OMEROPluginProjectSettings

ID - Static variable in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginProjectSettings

ID - Static variable in class org.hkijena.jipipe.plugins.processes.JIPipeProcessesPluginApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonPluginAdapterApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.python.PythonPluginApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.python.PythonPluginProjectSettings

ID - Static variable in class org.hkijena.jipipe.plugins.r.RPluginApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.r.RPluginProjectSettings

ID - Static variable in class org.hkijena.jipipe.plugins.settings.JIPipeBackupApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.settings.JIPipeDataExporterApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.settings.JIPipeDataStorageProjectSettings

ID - Static variable in class org.hkijena.jipipe.plugins.settings.JIPipeDefaultCacheDisplayApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.settings.JIPipeDefaultResultImporterApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.settings.JIPipeDownloadsApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.settings.JIPipeExtensionApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.settings.JIPipeHistoryJournalApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.settings.JIPipeNodeTemplateApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.settings.JIPipeProjectAuthorsApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.settings.JIPipeProjectDefaultsApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

ID - Static variable in class org.hkijena.jipipe.plugins.settings.JIPipeTableViewerUIApplicationSettings

IfElseExprFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.control

IfElseExprFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.control.IfElseExprFunction

IfElseFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.control

IfElseFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.control.IfElseFunction

ifNullOr(T, boolean, Predicate<T>) - Static method in class org.hkijena.jipipe.utils.StreamUtils

Returns ifNull if the nullable is null.

IGNORE_CUSTOM - Static variable in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Whether to ignore all custom parameters

IGNORE_REFLECTION - Static variable in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Whether to ignore all reflection parameters

IgnoreColorSpace - Class in org.hkijena.jipipe.plugins.imagejdatatypes.colorspace

A ColorSpace that indicates that no color space information is set.

IgnoreColorSpace() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.IgnoreColorSpace

IJ1Hdf5 - Class in org.hkijena.jipipe.plugins.ilastik.utils.hdf5

IJ2DataFromImageWindowImageJImporter - Class in org.hkijena.jipipe.plugins.imagej2.compat

IJ2DataFromImageWindowImageJImporter() - Constructor for class org.hkijena.jipipe.plugins.imagej2.compat.IJ2DataFromImageWindowImageJImporter

IJ2DataToImageWindowImageJExporter - Class in org.hkijena.jipipe.plugins.imagej2.compat

IJ2DataToImageWindowImageJExporter() - Constructor for class org.hkijena.jipipe.plugins.imagej2.compat.IJ2DataToImageWindowImageJExporter

IJ3DPlugin - Class in org.hkijena.jipipe.plugins.ij3d

IJ3DPlugin() - Constructor for class org.hkijena.jipipe.plugins.ij3d.IJ3DPlugin

IJ3DUtils - Class in org.hkijena.jipipe.plugins.ij3d

IJ3DUtils() - Constructor for class org.hkijena.jipipe.plugins.ij3d.IJ3DUtils

IJLogToJIPipeProgressInfoPump - Class in org.hkijena.jipipe.utils

Takes control of the log in IJ and pumps its messages into a JIPipeProgressInfo

IJLogToJIPipeProgressInfoPump(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.utils.IJLogToJIPipeProgressInfoPump

IlastikAutoContextAlgorithm - Class in org.hkijena.jipipe.plugins.ilastik.nodes

IlastikAutoContextAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

IlastikAutoContextAlgorithm(IlastikAutoContextAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

IlastikAutoContextAlgorithm.OutputParameters - Class in org.hkijena.jipipe.plugins.ilastik.nodes

IlastikEnvironment - Class in org.hkijena.jipipe.plugins.ilastik.environments

Parameter that describes a Python environment

IlastikEnvironment() - Constructor for class org.hkijena.jipipe.plugins.ilastik.environments.IlastikEnvironment

IlastikEnvironment(IlastikEnvironment) - Constructor for class org.hkijena.jipipe.plugins.ilastik.environments.IlastikEnvironment

IlastikEnvironment.List - Class in org.hkijena.jipipe.plugins.ilastik.environments

A list of IlastikEnvironment

IlastikEnvironmentAccessNode - Interface in org.hkijena.jipipe.plugins.ilastik.environments

Interface that should be used by nodes that access the OMERO credentials environments

IlastikModelData - Class in org.hkijena.jipipe.plugins.ilastik.datatypes

IlastikModelData(Path, boolean) - Constructor for class org.hkijena.jipipe.plugins.ilastik.datatypes.IlastikModelData

IlastikModelData(IlastikModelData) - Constructor for class org.hkijena.jipipe.plugins.ilastik.datatypes.IlastikModelData

IlastikObjectClassificationAlgorithm - Class in org.hkijena.jipipe.plugins.ilastik.nodes

IlastikObjectClassificationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

IlastikObjectClassificationAlgorithm(IlastikObjectClassificationAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

IlastikObjectClassificationAlgorithm.OutputParameters - Class in org.hkijena.jipipe.plugins.ilastik.nodes

IlastikPixelClassificationAlgorithm - Class in org.hkijena.jipipe.plugins.ilastik.nodes

IlastikPixelClassificationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

IlastikPixelClassificationAlgorithm(IlastikPixelClassificationAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

IlastikPixelClassificationAlgorithm.OutputParameters - Class in org.hkijena.jipipe.plugins.ilastik.nodes

IlastikPlugin - Class in org.hkijena.jipipe.plugins.ilastik

IlastikPlugin() - Constructor for class org.hkijena.jipipe.plugins.ilastik.IlastikPlugin

IlastikPluginApplicationSettings - Class in org.hkijena.jipipe.plugins.ilastik.settings

IlastikPluginApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

IlastikPluginProjectSettings - Class in org.hkijena.jipipe.plugins.ilastik.settings

IlastikPluginProjectSettings() - Constructor for class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginProjectSettings

IlastikPredictionMapsObjectClassificationAlgorithm - Class in org.hkijena.jipipe.plugins.ilastik.nodes

IlastikPredictionMapsObjectClassificationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

IlastikPredictionMapsObjectClassificationAlgorithm(IlastikPredictionMapsObjectClassificationAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters - Class in org.hkijena.jipipe.plugins.ilastik.nodes

IlastikProjectValidationMode - Enum in org.hkijena.jipipe.plugins.ilastik.parameters

IlastikSegmentationImageObjectClassificationAlgorithm - Class in org.hkijena.jipipe.plugins.ilastik.nodes

IlastikSegmentationImageObjectClassificationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

IlastikSegmentationImageObjectClassificationAlgorithm(IlastikSegmentationImageObjectClassificationAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters - Class in org.hkijena.jipipe.plugins.ilastik.nodes

IlastikUtils - Class in org.hkijena.jipipe.plugins.ilastik.utils

IlastikUtils() - Constructor for class org.hkijena.jipipe.plugins.ilastik.utils.IlastikUtils

IlluminationCorrection2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast

Applies illumination correction

IlluminationCorrection2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.IlluminationCorrection2DAlgorithm

IlluminationCorrection2DAlgorithm(IlluminationCorrection2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.IlluminationCorrection2DAlgorithm

Copies the algorithm

Image2DData - Interface in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2

Annotates an image as 2D image

Image3DData - Interface in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3

Annotates an image as 3D image

Image4DData - Interface in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4

Annotates an image as 2D image

IMAGE5D - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageScienceUtils

Image5DData - Interface in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5

Annotates an image as 2D image

Image5DExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

Variable source that contains basic information about an image

Image5DExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.Image5DExpressionParameterVariablesInfo

Image5DSliceIndexExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

Image5DSliceIndexExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Image5DSliceIndexExpressionParameterVariablesInfo

Image_16_32_Filter - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary

Image_16_32_Filter() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.Image_16_32_Filter

Image_8_16_32_Filter - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary

Image_8_16_32_Filter() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.Image_8_16_32_Filter

IMAGE_FROM_RESOURCES_CACHE - Static variable in class org.hkijena.jipipe.utils.UIUtils

ImageBlendLayer - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

ImageBlendLayer() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageBlendLayer

ImageBlendLayer(ImageBlendLayer) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageBlendLayer

ImageBlendMode - Enum in org.hkijena.jipipe.plugins.imagejdatatypes.util

ImageBoxAnnotationGraphNode - Class in org.hkijena.jipipe.plugins.graphannotation.nodes

ImageBoxAnnotationGraphNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode

ImageBoxAnnotationGraphNode(ImageBoxAnnotationGraphNode) - Constructor for class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode

ImageBoxAnnotationGraphNode.ImageParameters - Class in org.hkijena.jipipe.plugins.graphannotation.nodes

ImageBoxAnnotationGraphNodeTool - Class in org.hkijena.jipipe.plugins.graphannotation.tools

ImageBoxAnnotationGraphNodeTool() - Constructor for class org.hkijena.jipipe.plugins.graphannotation.tools.ImageBoxAnnotationGraphNodeTool

ImageCalculator2DExpression - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

ImageCalculator2DExpression(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageCalculator2DExpression

ImageCalculator2DExpression(ImageCalculator2DExpression) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageCalculator2DExpression

ImageComparer2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Deprecated.

ImageComparer2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm

Deprecated.

Instantiates a new node type.

ImageComparer2DAlgorithm(ImageComparer2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm

Deprecated.

Instantiates a new node type.

ImageComparer2DAlgorithm.Operand - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Deprecated.

Determines the order of input images

ImageComparer2DAlgorithm.Operation - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Deprecated.

Available math operations

ImageDataPreview - Class in org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis

ImageDataPreview(JIPipeDesktopProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableRowInfo, JIPipeDataAnnotationInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImageDataPreview

Creates a new renderer

ImageDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.images

ImageDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.images.ImageDesktopParameterEditorUI

ImageDimensions - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

Encapsulates the dimensions of an image.

ImageDimensions(int, int, int, int, int) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageDimensions

ImageDimensions(int, int) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageDimensions

ImageFromMatrix2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate

Wrapper around Convolver

ImageFromMatrix2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.ImageFromMatrix2DAlgorithm

Instantiates a new node type.

ImageFromMatrix2DAlgorithm(ImageFromMatrix2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.ImageFromMatrix2DAlgorithm

Creates a copy

ImageImportParameters - Class in org.hkijena.jipipe.plugins.omero.parameters

ImageImportParameters() - Constructor for class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

ImageImportParameters(ImageImportParameters) - Constructor for class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

ImageJ1ToImageJ2Converter - Class in org.hkijena.jipipe.plugins.imagej2.converters

ImageJ1ToImageJ2Converter() - Constructor for class org.hkijena.jipipe.plugins.imagej2.converters.ImageJ1ToImageJ2Converter

ImageJ2DatasetData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes

ImageJ2DatasetData(Dataset) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.ImageJ2DatasetData

ImageJ2DatasetData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.ImageJ2DatasetData

ImageJ2DatasetDataViewer - Class in org.hkijena.jipipe.plugins.imagej2.viewers

ImageJ2DatasetDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.imagej2.viewers.ImageJ2DatasetDataViewer

ImageJ2JIPipeModuleIOService - Interface in org.hkijena.jipipe.plugins.imagej2.io

Service to communicate between ImageJ and JIPipe

ImageJ2ModuleIO - Interface in org.hkijena.jipipe.plugins.imagej2.io

An object that is responsible for transferring inputs and outputs between JIPipe slots/parameters and ImageJ2 parameters

ImageJ2OpNode - Class in org.hkijena.jipipe.plugins.imagej2

ImageJ2OpNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNode

ImageJ2OpNode(ImageJ2OpNode) - Constructor for class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNode

ImageJ2OpNodeInfo - Class in org.hkijena.jipipe.plugins.imagej2

A JIPipeNodeInfo implementation that reads its information from an ImageJ2 Command

ImageJ2OpNodeInfo(Context, OpInfo, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

ImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds

ImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.ImageJ2OutOfBoundsFactoryData

ImageJ2Plugin - Class in org.hkijena.jipipe.plugins.imagej2

Extension that adds ImageJ2 algorithms

ImageJ2Plugin() - Constructor for class org.hkijena.jipipe.plugins.imagej2.ImageJ2Plugin

ImageJ2ShapeData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.shapes

ImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.ImageJ2ShapeData

ImageJ2ToImageJ1Converter - Class in org.hkijena.jipipe.plugins.imagej2.converters

ImageJ2ToImageJ1Converter() - Constructor for class org.hkijena.jipipe.plugins.imagej2.converters.ImageJ2ToImageJ1Converter

ImageJAlgorithmsPlugin - Class in org.hkijena.jipipe.plugins.imagejalgorithms

Extension that adds ImageJ2 algorithms

ImageJAlgorithmsPlugin() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.ImageJAlgorithmsPlugin

ImageJAlgorithmUtils - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

ImageJAlgorithmUtils() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageJAlgorithmUtils

ImageJCalibrationMode - Enum in org.hkijena.jipipe.utils

ImageJContrastEnhancerAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast

ImageJContrastEnhancerAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.ImageJContrastEnhancerAlgorithm

ImageJContrastEnhancerAlgorithm(ImageJContrastEnhancerAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.ImageJContrastEnhancerAlgorithm

ImageJDataExporter - Interface in org.hkijena.jipipe.api.compat

ImageJDataExporterRef - Class in org.hkijena.jipipe.plugins.parameters.library.references

Helper to allow easy serialization of ImageJDataExporter references

ImageJDataExporterRef(String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExporterRef

ImageJDataExporterRef() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExporterRef

New instance

ImageJDataExporterRef(ImageJDataExporter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExporterRef

ImageJDataExporterRef(ImageJDataExporterRef) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExporterRef

ImageJDataExporterRef.Deserializer - Class in org.hkijena.jipipe.plugins.parameters.library.references

Deserializes the reference from a string

ImageJDataExporterRef.Serializer - Class in org.hkijena.jipipe.plugins.parameters.library.references

Serializes the reference as ID

ImageJDataExporterRefDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.references

Parameter for JIPipeNodeInfoRef

ImageJDataExporterRefDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExporterRefDesktopParameterEditorUI

ImageJDataExporterUI - Class in org.hkijena.jipipe.api.compat

User interface around a ImageJDataExportOperation

ImageJDataExporterUI(JIPipeDesktopWorkbench, ImageJDataExportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ImageJDataExporterUI

ImageJDataExportOperation - Class in org.hkijena.jipipe.api.compat

Combines a ImageJDataExporter with its appropriate parameters.

ImageJDataExportOperation() - Constructor for class org.hkijena.jipipe.api.compat.ImageJDataExportOperation

ImageJDataExportOperation(ImageJDataExporter) - Constructor for class org.hkijena.jipipe.api.compat.ImageJDataExportOperation

ImageJDataExportOperationRef - Class in org.hkijena.jipipe.plugins.parameters.library.references

Helper to allow easy serialization of ImageJDataExporter references

ImageJDataExportOperationRef(String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

ImageJDataExportOperationRef() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

New instance

ImageJDataExportOperationRef(ImageJDataExporter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

ImageJDataExportOperationRef(ImageJDataExportOperationRef) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

ImageJDataExportOperationRefDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.references

Parameter for JIPipeNodeInfoRef

ImageJDataExportOperationRefDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRefDesktopParameterEditorUI

ImageJDataImporter - Interface in org.hkijena.jipipe.api.compat

ImageJDataImporterRef - Class in org.hkijena.jipipe.plugins.parameters.library.references

Helper to allow easy serialization of ImageJDataImporter references

ImageJDataImporterRef(String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImporterRef

ImageJDataImporterRef() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImporterRef

New instance

ImageJDataImporterRef(ImageJDataImporterRef) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImporterRef

ImageJDataImporterRef(ImageJDataImporter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImporterRef

ImageJDataImporterRef.Deserializer - Class in org.hkijena.jipipe.plugins.parameters.library.references

Deserializes the reference from a string

ImageJDataImporterRef.Serializer - Class in org.hkijena.jipipe.plugins.parameters.library.references

Serializes the reference as ID

ImageJDataImporterRefDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.references

Parameter for JIPipeNodeInfoRef

ImageJDataImporterRefDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImporterRefDesktopParameterEditorUI

ImageJDataImporterUI - Class in org.hkijena.jipipe.api.compat

User interface around a ImageJDataImportOperation

ImageJDataImporterUI(JIPipeDesktopWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ImageJDataImporterUI

ImageJDataImportOperation - Class in org.hkijena.jipipe.api.compat

Runs a ImageJDataImporter import operation.

ImageJDataImportOperation() - Constructor for class org.hkijena.jipipe.api.compat.ImageJDataImportOperation

ImageJDataImportOperation(ImageJDataImporter) - Constructor for class org.hkijena.jipipe.api.compat.ImageJDataImportOperation

ImageJDataImportOperationRef - Class in org.hkijena.jipipe.plugins.parameters.library.references

Helper to allow easy serialization of ImageJDataImporter references

ImageJDataImportOperationRef(String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRef

ImageJDataImportOperationRef() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRef

New instance

ImageJDataImportOperationRef(ImageJDataImportOperationRef) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRef

ImageJDataImportOperationRef(ImageJDataImporter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRef

ImageJDataImportOperationRefDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.references

Parameter for JIPipeNodeInfoRef

ImageJDataImportOperationRefDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRefDesktopParameterEditorUI

ImageJDataTypesApplicationSettings - Class in org.hkijena.jipipe.plugins.imagejdatatypes

ImageJDataTypesApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesApplicationSettings

ImageJDataTypesPlugin - Class in org.hkijena.jipipe.plugins.imagejdatatypes

Provides ImageJ data types

ImageJDataTypesPlugin() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesPlugin

ImageJExporterParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.parameters.library.references

ImageJExportParameters - Class in org.hkijena.jipipe.api.compat

Describes how data should be exported into ImageJ

ImageJExportParameters() - Constructor for class org.hkijena.jipipe.api.compat.ImageJExportParameters

ImageJExportParameters(boolean, boolean, boolean, String) - Constructor for class org.hkijena.jipipe.api.compat.ImageJExportParameters

ImageJExportParameters(ImageJExportParameters) - Constructor for class org.hkijena.jipipe.api.compat.ImageJExportParameters

ImageJImageToImpImageDataTypeConverter - Class in org.hkijena.jipipe.plugins.imp.datatypes

ImageJImageToImpImageDataTypeConverter() - Constructor for class org.hkijena.jipipe.plugins.imp.datatypes.ImageJImageToImpImageDataTypeConverter

ImageJImporterParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.parameters.library.references

ImageJImportParameters - Class in org.hkijena.jipipe.api.compat

Describes how data should be imported into ImageJ

ImageJImportParameters() - Constructor for class org.hkijena.jipipe.api.compat.ImageJImportParameters

ImageJImportParameters(String) - Constructor for class org.hkijena.jipipe.api.compat.ImageJImportParameters

ImageJImportParameters(ImageJImportParameters) - Constructor for class org.hkijena.jipipe.api.compat.ImageJImportParameters

ImageJMacro - Class in org.hkijena.jipipe.plugins.parameters.library.scripts

Encapsulates ImageJ macro code to be detected by the parameter system

ImageJMacro() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.scripts.ImageJMacro

ImageJMacro(ImageJMacro) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.scripts.ImageJMacro

ImageJNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories

ImageJNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory

ImageJToOpenCvDataTypeConverter - Class in org.hkijena.jipipe.plugins.opencv.datatypes

ImageJToOpenCvDataTypeConverter() - Constructor for class org.hkijena.jipipe.plugins.opencv.datatypes.ImageJToOpenCvDataTypeConverter

ImageJUtils - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

Utility functions for ImageJ

ImageJUtils() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

ImageMeasurementUtils - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util.measure

Custom implementation of Analyzer

ImageMeasurementUtils() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.ImageMeasurementUtils

ImageParameter - Class in org.hkijena.jipipe.plugins.parameters.library.images

ImageParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.images.ImageParameter

ImageParameter(BufferedImage) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.images.ImageParameter

ImageParameter(ImageParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.images.ImageParameter

ImageParameter(URL) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.images.ImageParameter

ImageParameter.Deserializer - Class in org.hkijena.jipipe.plugins.parameters.library.images

ImageParameter.Serializer - Class in org.hkijena.jipipe.plugins.parameters.library.images

ImageParameters() - Constructor for class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

ImageParameters(ImageBoxAnnotationGraphNode.ImageParameters) - Constructor for class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

ImageParameters() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.ImageParameters

ImageParameters(MontageCreator.ImageParameters) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.ImageParameters

ImageParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.parameters.library.images

ImagePlus2DColorData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color

A colored image without dimension.

ImagePlus2DColorData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorData

ImagePlus2DColorData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorData

ImagePlus2DColorHSBData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color

RGB colored 2D image

ImagePlus2DColorHSBData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorHSBData

ImagePlus2DColorHSBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorHSBData

ImagePlus2DColorHSBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorHSBData

Creates an empty image with given dimensions

ImagePlus2DColorLABData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color

RGB colored 2D image

ImagePlus2DColorLABData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorLABData

ImagePlus2DColorLABData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorLABData

ImagePlus2DColorLABData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorLABData

Creates an empty image with given dimensions

ImagePlus2DColorRGBData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color

RGB colored 2D image

ImagePlus2DColorRGBData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorRGBData

ImagePlus2DColorRGBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorRGBData

ImagePlus2DColorRGBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorRGBData

Creates an empty image with given dimensions

ImagePlus2DData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2

2D image

ImagePlus2DData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.ImagePlus2DData

ImagePlus2DData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.ImagePlus2DData

ImagePlus2DGreyscale16UData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale

16-bit greyscale 2D image

ImagePlus2DGreyscale16UData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale16UData

ImagePlus2DGreyscale16UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale16UData

Creates an empty image with given dimensions

ImagePlus2DGreyscale16UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale16UData

ImagePlus2DGreyscale32FData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale

32 bit float greyscale 2D image

ImagePlus2DGreyscale32FData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale32FData

ImagePlus2DGreyscale32FData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale32FData

Creates an empty image with given dimensions

ImagePlus2DGreyscale32FData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale32FData

ImagePlus2DGreyscale8UData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale

8-bit greyscale 2D image

ImagePlus2DGreyscale8UData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale8UData

ImagePlus2DGreyscale8UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale8UData

Creates an empty image with given dimensions

ImagePlus2DGreyscale8UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale8UData

ImagePlus2DGreyscaleData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale

Greyscale 2D image

ImagePlus2DGreyscaleData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleData

ImagePlus2DGreyscaleData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleData

ImagePlus2DGreyscaleMaskData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale

8-bit mask 2D image

ImagePlus2DGreyscaleMaskData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleMaskData

ImagePlus2DGreyscaleMaskData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleMaskData

Creates an empty image with given dimensions

ImagePlus2DGreyscaleMaskData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleMaskData

ImagePlus3DColorData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color

A colored image without dimension.

ImagePlus3DColorData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorData

ImagePlus3DColorData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorData

ImagePlus3DColorHSBData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color

RGB color 3D image

ImagePlus3DColorHSBData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorHSBData

ImagePlus3DColorHSBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorHSBData

Creates an empty image with given dimensions

ImagePlus3DColorHSBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorHSBData

ImagePlus3DColorLABData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color

RGB color 3D image

ImagePlus3DColorLABData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorLABData

ImagePlus3DColorLABData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorLABData

ImagePlus3DColorLABData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorLABData

Creates an empty image with given dimensions

ImagePlus3DColorRGBData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color

RGB color 3D image

ImagePlus3DColorRGBData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorRGBData

ImagePlus3DColorRGBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorRGBData

ImagePlus3DColorRGBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorRGBData

Creates an empty image with given dimensions

ImagePlus3DData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3

3D image

ImagePlus3DData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.ImagePlus3DData

ImagePlus3DData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.ImagePlus3DData

ImagePlus3DGreyscale16UData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale

16-bit greyscale 3D image

ImagePlus3DGreyscale16UData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale16UData

ImagePlus3DGreyscale16UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale16UData

Creates an empty image with given dimensions

ImagePlus3DGreyscale16UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale16UData

ImagePlus3DGreyscale32FData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale

32-bit floating point greyscale 3D image

ImagePlus3DGreyscale32FData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale32FData

ImagePlus3DGreyscale32FData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale32FData

Creates an empty image with given dimensions

ImagePlus3DGreyscale32FData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale32FData

ImagePlus3DGreyscale8UData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale

8-bit greyscale 3D image

ImagePlus3DGreyscale8UData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale8UData

ImagePlus3DGreyscale8UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale8UData

Creates an empty image with given dimensions

ImagePlus3DGreyscale8UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale8UData

ImagePlus3DGreyscaleData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale

Greyscale 3D image

ImagePlus3DGreyscaleData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleData

ImagePlus3DGreyscaleData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleData

ImagePlus3DGreyscaleMaskData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale

8-bit mask 3D image

ImagePlus3DGreyscaleMaskData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleMaskData

ImagePlus3DGreyscaleMaskData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleMaskData

Creates an empty image with given dimensions

ImagePlus3DGreyscaleMaskData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleMaskData

ImagePlus4DColorData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color

A colored image without dimension.

ImagePlus4DColorData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorData

ImagePlus4DColorData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorData

ImagePlus4DColorHSBData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color

RGB color 4D image

ImagePlus4DColorHSBData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorHSBData

ImagePlus4DColorHSBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorHSBData

ImagePlus4DColorHSBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorHSBData

Creates an empty image with given dimensions

ImagePlus4DColorLABData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color

RGB color 4D image

ImagePlus4DColorLABData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorLABData

ImagePlus4DColorLABData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorLABData

ImagePlus4DColorLABData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorLABData

Creates an empty image with given dimensions

ImagePlus4DColorRGBData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color

RGB color 4D image

ImagePlus4DColorRGBData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorRGBData

ImagePlus4DColorRGBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorRGBData

ImagePlus4DColorRGBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorRGBData

Creates an empty image with given dimensions

ImagePlus4DData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4

4D image

ImagePlus4DData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.ImagePlus4DData

ImagePlus4DData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.ImagePlus4DData

ImagePlus4DGreyscale16UData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale

16-bit greyscale 4D image

ImagePlus4DGreyscale16UData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale16UData

ImagePlus4DGreyscale16UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale16UData

Creates an empty image with given dimensions

ImagePlus4DGreyscale16UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale16UData

ImagePlus4DGreyscale32FData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale

32-bit floating point greyscale 4D image

ImagePlus4DGreyscale32FData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale32FData

ImagePlus4DGreyscale32FData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale32FData

Creates an empty image with given dimensions

ImagePlus4DGreyscale32FData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale32FData

ImagePlus4DGreyscale8UData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale

8-bit greyscale 4D image

ImagePlus4DGreyscale8UData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale8UData

ImagePlus4DGreyscale8UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale8UData

Creates an empty image with given dimensions

ImagePlus4DGreyscale8UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale8UData

ImagePlus4DGreyscaleData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale

Greyscale 4D image

ImagePlus4DGreyscaleData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleData

ImagePlus4DGreyscaleData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleData

ImagePlus4DGreyscaleMaskData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale

Mask 4D image

ImagePlus4DGreyscaleMaskData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleMaskData

ImagePlus4DGreyscaleMaskData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleMaskData

Creates an empty image with given dimensions

ImagePlus4DGreyscaleMaskData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleMaskData

ImagePlus5DColorData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color

A colored image without dimension.

ImagePlus5DColorData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorData

ImagePlus5DColorData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorData

ImagePlus5DColorHSBData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color

RGB color 5D image

ImagePlus5DColorHSBData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorHSBData

ImagePlus5DColorHSBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorHSBData

ImagePlus5DColorHSBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorHSBData

Creates an empty image with given dimensions

ImagePlus5DColorLABData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color

RGB color 5D image

ImagePlus5DColorLABData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorLABData

ImagePlus5DColorLABData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorLABData

ImagePlus5DColorLABData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorLABData

Creates an empty image with given dimensions

ImagePlus5DColorRGBData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color

RGB color 5D image

ImagePlus5DColorRGBData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorRGBData

ImagePlus5DColorRGBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorRGBData

ImagePlus5DColorRGBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorRGBData

Creates an empty image with given dimensions

ImagePlus5DData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5

5D image

ImagePlus5DData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.ImagePlus5DData

ImagePlus5DData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.ImagePlus5DData

ImagePlus5DGreyscale16UData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale

16-bit greyscale 5D image

ImagePlus5DGreyscale16UData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale16UData

ImagePlus5DGreyscale16UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale16UData

Creates an empty image with given dimensions

ImagePlus5DGreyscale16UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale16UData

ImagePlus5DGreyscale32FData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale

32-bit floating point greyscale image

ImagePlus5DGreyscale32FData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale32FData

ImagePlus5DGreyscale32FData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale32FData

Creates an empty image with given dimensions

ImagePlus5DGreyscale32FData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale32FData

ImagePlus5DGreyscale8UData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale

8-bit greyscale 5D image

ImagePlus5DGreyscale8UData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale8UData

ImagePlus5DGreyscale8UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale8UData

Creates an empty image with given dimensions

ImagePlus5DGreyscale8UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale8UData

ImagePlus5DGreyscaleData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale

Greyscale 5D image

ImagePlus5DGreyscaleData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleData

ImagePlus5DGreyscaleData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleData

ImagePlus5DGreyscaleMaskData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale

Mask 5D image

ImagePlus5DGreyscaleMaskData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleMaskData

ImagePlus5DGreyscaleMaskData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleMaskData

Creates an empty image with given dimensions

ImagePlus5DGreyscaleMaskData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleMaskData

ImagePlusColorData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color

A colored image without dimension.

ImagePlusColorData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorData

ImagePlusColorData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorData

ImagePlusColorHSBData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color

HSV colored image without dimension.

ImagePlusColorHSBData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorHSBData

ImagePlusColorHSBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorHSBData

ImagePlusColorHSBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorHSBData

Creates an empty image with given dimensions

ImagePlusColorLABData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color

LAB colored image without dimension.

ImagePlusColorLABData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorLABData

ImagePlusColorLABData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorLABData

ImagePlusColorLABData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorLABData

Creates an empty image with given dimensions

ImagePlusColorRGBData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color

RGB colored image without dimension.

ImagePlusColorRGBData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorRGBData

ImagePlusColorRGBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorRGBData

ImagePlusColorRGBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorRGBData

Creates an empty image with given dimensions

ImagePlusData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes

ImageJ image

ImagePlusData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

ImagePlusData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

ImagePlusDataFromImageWindowImageJImporter - Class in org.hkijena.jipipe.plugins.imagejdatatypes.compat

ImagePlusDataFromImageWindowImageJImporter(Class<? extends ImagePlusData>) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.compat.ImagePlusDataFromImageWindowImageJImporter

ImagePlusDataToCLIJImageDataConverter - Class in org.hkijena.jipipe.plugins.clij2.datatypes

Converter from ImagePlusData to CLIJImageData

ImagePlusDataToCLIJImageDataConverter() - Constructor for class org.hkijena.jipipe.plugins.clij2.datatypes.ImagePlusDataToCLIJImageDataConverter

ImagePlusDataToImageWindowImageJExporter - Class in org.hkijena.jipipe.plugins.imagejdatatypes.compat

ImagePlusDataToImageWindowImageJExporter() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.compat.ImagePlusDataToImageWindowImageJExporter

ImagePlusDataViewer - Class in org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers

ImagePlusDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ImagePlusDataViewer

ImagePlusFFT2DData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft

2D image in frequency space

ImagePlusFFT2DData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFT2DData

Creates a new instance

ImagePlusFFT3DData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft

3D image in frequency space

ImagePlusFFT3DData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFT3DData

Creates a new instance

ImagePlusFFT4DData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft

4D image in frequency space

ImagePlusFFT4DData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFT4DData

Creates a new instance

ImagePlusFFT5DData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft

5D image in frequency space

ImagePlusFFT5DData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFT5DData

Creates a new instance

ImagePlusFFTData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft

Image in frequency space

ImagePlusFFTData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFTData

Creates a new instance

ImagePlusFFTData.FFTInfo - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft

Class that stores info about the FHT object

ImagePlusFromGUI - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

Imports ImagePlusData from the GUI

ImagePlusFromGUI(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ImagePlusFromGUI

ImagePlusFromGUI(ImagePlusFromGUI) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ImagePlusFromGUI

ImagePlusGreyscale16UData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale

16-bit greyscale image without dimension.

ImagePlusGreyscale16UData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale16UData

ImagePlusGreyscale16UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale16UData

Creates an empty image with given dimensions

ImagePlusGreyscale16UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale16UData

ImagePlusGreyscale32FData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale

32 bit float greyscale image without dimension.

ImagePlusGreyscale32FData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale32FData

ImagePlusGreyscale32FData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale32FData

Creates an empty image with given dimensions

ImagePlusGreyscale32FData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale32FData

ImagePlusGreyscale8UData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale

8-bit greyscale image without dimension.

ImagePlusGreyscale8UData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale8UData

ImagePlusGreyscale8UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale8UData

Creates an empty image with given dimensions

ImagePlusGreyscale8UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale8UData

ImagePlusGreyscaleData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale

Greyscale image without dimension.

ImagePlusGreyscaleData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleData

ImagePlusGreyscaleData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleData

ImagePlusGreyscaleMaskData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale

8-bit mask without dimension.

ImagePlusGreyscaleMaskData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleMaskData

ImagePlusGreyscaleMaskData(ImageDimensions) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleMaskData

Creates an empty image with given dimensions

ImagePlusGreyscaleMaskData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleMaskData

ImagePlusImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.data.input

Handling of ImagePlus It is assumed that these refer to images (conversion to ImageJ2DatasetData)

ImagePlusImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.data.input.ImagePlusImageJ2ModuleInput

ImagePlusImageJ2ModuleOutput - Class in org.hkijena.jipipe.plugins.imagej2.io.data.output

Handling of ImagePlus It is assumed that these refer to images (conversion to ImageJ2DatasetData)

ImagePlusImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.data.output.ImagePlusImageJ2ModuleOutput

ImagePlusPropertiesExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

Variable source that contains image statistics

ImagePlusPropertiesExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImagePlusPropertiesExpressionParameterVariablesInfo

ImagePlusResultImportRun - Class in org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis

ImagePlusResultImportRun(JIPipeDataSlot, JIPipeDataTableRowInfo, Path, String, String, String, JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImagePlusResultImportRun

ImagePlusToGUI - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

Imports ImagePlusData from the GUI

ImagePlusToGUI(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ImagePlusToGUI

ImagePlusToGUI(ImagePlusToGUI) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ImagePlusToGUI

ImagePlusToOMEImageTypeConverter - Class in org.hkijena.jipipe.plugins.imagejdatatypes.converters

ImagePlusToOMEImageTypeConverter() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.converters.ImagePlusToOMEImageTypeConverter

ImagePlusWindowImageJImporterUI - Class in org.hkijena.jipipe.plugins.imagejdatatypes.compat

Imports an ImagePlus

ImagePlusWindowImageJImporterUI(JIPipeDesktopWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.compat.ImagePlusWindowImageJImporterUI

ImagePropertiesToAnnotationAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate

Adds data annotations that contain the image properties

ImagePropertiesToAnnotationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

Creates a new instance

ImagePropertiesToAnnotationAlgorithm(ImagePropertiesToAnnotationAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

Creates a copy

ImageQueryExpressionVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejdatatypes.parameters

ImageQueryExpressionVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.ImageQueryExpressionVariablesInfo

ImageROITargetArea - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.parameters

ImageSamplesApplicationSettings - Class in org.hkijena.jipipe.plugins.imagejdatatypes.settings

ImageSamplesApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesApplicationSettings

ImageSamplesProjectSettings - Class in org.hkijena.jipipe.plugins.imagejdatatypes.settings

ImageSamplesProjectSettings() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesProjectSettings

ImageScienceUtils - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

ImageScienceUtils() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageScienceUtils

imagesHaveSameSize(ImagePlus...) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

imagesHaveSameSize(Collection<ImagePlus>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

ImageSliceCube - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

ImageSliceCube() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceCube

ImageSliceCube(ImageSliceIndex, ImageSliceIndex) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceCube

ImageSliceCube(ImageSliceCube) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceCube

ImageSliceIndex - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

Helper class that identifies an image slice.

ImageSliceIndex(int, int, int) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

Initializes a slice index

ImageSliceIndex() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

Initializes a slice index where all values are -1

ImageSliceIndex(ImageSliceIndex) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

Creates a copy

ImageSliceIndices - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

ImageSliceIndices() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndices

ImageSliceIndices(TIntList, TIntList, TIntList) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndices

ImageSliceIndices(ImageSliceIndices) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndices

ImagesNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories

ImagesNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory

IMAGESTACK - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageScienceUtils

ImageStackFromFolder - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources

Loads an image data from a file via IJ.openFile()

ImageStackFromFolder(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

ImageStackFromFolder(ImageStackFromFolder) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

Copies the algorithm

ImageStatistics5DExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

Variable source that contains image statistics

ImageStatistics5DExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageStatistics5DExpressionParameterVariablesInfo

ImageStatisticsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze

Wrapper around RoiManager

ImageStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm

Instantiates a new node type.

ImageStatisticsAlgorithm(ImageStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm

Instantiates a new node type.

ImageStatisticsExpressionAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze

Wrapper around RoiManager

ImageStatisticsExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm

Instantiates a new node type.

ImageStatisticsExpressionAlgorithm(ImageStatisticsExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm

Instantiates a new node type.

ImageStatisticsSetParameter - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util.measure

A DynamicSetParameter that contains image statistics measurements.

ImageStatisticsSetParameter() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.ImageStatisticsSetParameter

ImageStatisticsSetParameter(ImageStatisticsSetParameter) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.ImageStatisticsSetParameter

ImageStatisticsSetParameter(Set<Measurement>) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.ImageStatisticsSetParameter

imageSubPixelCoordinateToScreen(Point2D.Double) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

Finds the screen coordinate for a pixel coordinate

imageToBase64(BufferedImage, String) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils

ImageToLUTTypeConverter - Class in org.hkijena.jipipe.plugins.imagejdatatypes.converters

ImageToLUTTypeConverter() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.converters.ImageToLUTTypeConverter

ImageToMatrixAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert

Algorithm that generates ResultsTableData as histogram

ImageToMatrixAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ImageToMatrixAlgorithm

Creates a new instance

ImageToMatrixAlgorithm(ImageToMatrixAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ImageToMatrixAlgorithm

Creates a copy

ImageToTableAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert

Algorithm that generates ResultsTableData as histogram

ImageToTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ImageToTableAlgorithm

Creates a new instance

ImageToTableAlgorithm(ImageToTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ImageToTableAlgorithm

Creates a copy

ImageToTableColumnAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert

ImageToTableColumnAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ImageToTableColumnAlgorithm

ImageToTableColumnAlgorithm(ImageToTableColumnAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ImageToTableColumnAlgorithm

ImageTypeConverter - Class in org.hkijena.jipipe.plugins.imagejdatatypes.converters

Converts ImageJ data type into each other

ImageTypeConverter(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.converters.ImageTypeConverter

Creates a new instance

ImageTypeConverter(ImageTypeConverter) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.converters.ImageTypeConverter

Copies the algorithm

ImageTypeInfo - Annotation Type in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes

Carries information about an ImagePlusData type that can be used for filtering the image

ImageViewer2DCompositeLayerEditor - Class in org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d

ImageViewer2DCompositeLayerEditor(JIPipeDesktopLegacyImageViewerPanel2D, int) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DCompositeLayerEditor

ImageViewer2DDisplayRangeControl - Class in org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d

ImageViewer2DDisplayRangeControl(CalibrationPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl

ImageViewer2DDisplayRangeControl.DisplayRangeStop - Enum in org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d

ImageViewer2DDisplayRangeControl.ThumbRenderer - Class in org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d

ImageViewer2DDisplayRangeControl.TrackRenderer - Class in org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d

ImageViewer2DLUTEditor - Class in org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d

ImageViewer2DLUTEditor(JIPipeDesktopLegacyImageViewer, int) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DLUTEditor

ImageViewerGeneralUIApplicationSettings - Class in org.hkijena.jipipe.plugins.imageviewer.settings

All settings for AbstractJIPipeDesktopGraphEditorUI

ImageViewerGeneralUIApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.imageviewer.settings.ImageViewerGeneralUIApplicationSettings

ImageViewerLUTEditor - Class in org.hkijena.jipipe.plugins.imageviewer.utils

Based on JXGradientChooser

ImageViewerLUTEditor(JIPipeDesktopLegacyImageViewer, int) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerLUTEditor

ImageViewerOpacityLUTEditor - Class in org.hkijena.jipipe.plugins.imageviewer.utils

Based on JXGradientChooser

ImageViewerOpacityLUTEditor(JIPipeDesktopLegacyImageViewer, int) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerOpacityLUTEditor

ImageViewerPanelCanvas2D - Class in org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d

ImageViewerPanelCanvas2D(JIPipeDesktopLegacyImageViewerPanel2D) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

ImageViewerPanelCanvas2D.PixelHoverEvent - Class in org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d

ImageViewerPanelCanvas2D.PixelHoverEventEmitter - Class in org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d

ImageViewerPanelCanvas2D.PixelHoverEventListener - Interface in org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d

ImageViewerPanelCanvas2D.ToolChangedEvent - Class in org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d

ImageViewerPanelCanvas2D.ToolChangedEventEmitter - Class in org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d

ImageViewerPanelCanvas2D.ToolChangedEventListener - Interface in org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d

ImageViewerPanelCanvas2DTool - Interface in org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d

Tool for the ImageViewerPanelCanvas2D

ImageViewerUIFilamentDisplayApplicationSettings - Class in org.hkijena.jipipe.plugins.ijfilaments.settings

ImageViewerUIFilamentDisplayApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.settings.ImageViewerUIFilamentDisplayApplicationSettings

ImageViewerUIROI2DDisplayApplicationSettings - Class in org.hkijena.jipipe.plugins.imagejdatatypes.settings

ImageViewerUIROI2DDisplayApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageViewerUIROI2DDisplayApplicationSettings

ImageViewerUIROI3DDisplayApplicationSettings - Class in org.hkijena.jipipe.plugins.ij3d.imageviewer

ImageViewerUIROI3DDisplayApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.ij3d.imageviewer.ImageViewerUIROI3DDisplayApplicationSettings

ImageViewerUISpotsDisplayApplicationSettings - Class in org.hkijena.jipipe.plugins.ijtrackmate.settings

ImageViewerUISpotsDisplayApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUISpotsDisplayApplicationSettings

ImageViewerUITracksDisplayApplicationSettings - Class in org.hkijena.jipipe.plugins.ijtrackmate.settings

ImageViewerUITracksDisplayApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUITracksDisplayApplicationSettings

ImgUtils - Class in org.hkijena.jipipe.plugins.ilastik.utils

ImpImageData - Class in org.hkijena.jipipe.plugins.imp.datatypes

ImpImageData(BufferedImage) - Constructor for class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

ImpImageData(Map<ImageSliceIndex, BufferedImage>) - Constructor for class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

ImpImageData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

ImpImageData(List<BufferedImage>, int, int, int) - Constructor for class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

ImpImageData(ImpImageData) - Constructor for class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

ImpImageDataBuilder - Class in org.hkijena.jipipe.plugins.imp.utils

ImpImageDataBuilder() - Constructor for class org.hkijena.jipipe.plugins.imp.utils.ImpImageDataBuilder

ImpImageDataViewer - Class in org.hkijena.jipipe.plugins.imp.viewers

ImpImageDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.imp.viewers.ImpImageDataViewer

ImpImageOutputFormat - Enum in org.hkijena.jipipe.plugins.imp.datatypes

ImpImageToImageJImageDataTypeConverter - Class in org.hkijena.jipipe.plugins.imp.datatypes

ImpImageToImageJImageDataTypeConverter() - Constructor for class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageToImageJImageDataTypeConverter

ImpImageUtils - Class in org.hkijena.jipipe.plugins.imp.utils

ImplicitImageTypeConverter - Class in org.hkijena.jipipe.plugins.imagejdatatypes.converters

An implicit converter between ImagePlusData types

ImplicitImageTypeConverter(Class<? extends JIPipeData>, Class<? extends JIPipeData>) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.converters.ImplicitImageTypeConverter

ImplicitPathTypeConverter - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Converts between the PathData types (non-trivial conversions)

ImplicitPathTypeConverter(Class<? extends JIPipeData>, Class<? extends JIPipeData>) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImplicitPathTypeConverter

ImplicitResultsTableDataConverter - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Converts ResultsTableData to AnnotationTableData

ImplicitResultsTableDataConverter() - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.ImplicitResultsTableDataConverter

ImportCellposeModelFromFileAlgorithm - Class in org.hkijena.jipipe.plugins.cellpose.algorithms

ImportCellposeModelFromFileAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.ImportCellposeModelFromFileAlgorithm

ImportCellposeModelFromFileAlgorithm(ImportCellposeModelFromFileAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.ImportCellposeModelFromFileAlgorithm

ImportCellposeSizeModelFromFileAlgorithm - Class in org.hkijena.jipipe.plugins.cellpose.algorithms

ImportCellposeSizeModelFromFileAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.ImportCellposeSizeModelFromFileAlgorithm

ImportCellposeSizeModelFromFileAlgorithm(ImportCellposeSizeModelFromFileAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.ImportCellposeSizeModelFromFileAlgorithm

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.compartments.datatypes.JIPipeCompartmentOutputData

importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compat.DataTableImageJDataImporter

importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compat.EmptyImageJDataImporter

importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.compat.ImageJDataImporter

Imports JIPipe data from ImageJ

importData(Object, ImageJImportParameters, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.compat.ImageJDataImporter

Imports JIPipe data from ImageJ.

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Imports this data from the path

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.data.JIPipeEmptyData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeEmptyThumbnailData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData

importData(JIPipeReadDataStorage, Class<T>) - Static method in class org.hkijena.jipipe.api.data.utils.JIPipeSerializedJsonObjectData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.data.utils.JIPipeWeakDataReferenceData

importData(JFreeChartPlotDataSeries) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

Adds data into the data storage

importData(TableModel, String) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

Imports data from a table model

importData(JIPipeReadDataStorage, Class<T>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.JIPipe

Imports data of given data type from its output folder.

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.batchassistant.DataBatchStatusData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData

importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.compat.LegacyCellposeModelImageJImporter

importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.compat.LegacyCellposeSizeModelImageJImporter

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.cellpose.legacy.datatypes.LegacyCellposeModelData

Deprecated.

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.cellpose.legacy.datatypes.LegacyCellposeSizeModelData

Deprecated.

importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.clij2.compat.CLIJ2DataFromImageWindowImageJImporter

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.clij2.datatypes.CLIJImageData

importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.compat.PathDataFromTableImageJImporter

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.filesystem.dataypes.FileData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.filesystem.dataypes.FolderData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.filesystem.dataypes.PathData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.forms.datatypes.BooleanFormData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.forms.datatypes.DoubleFormData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.forms.datatypes.EnumFormData

importData(JIPipeReadDataStorage, Class<T>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.forms.datatypes.FormData

Helper method that simplifies the importData() method definition

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.forms.datatypes.GroupHeaderFormData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.forms.datatypes.IntegerFormData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.forms.datatypes.StringFormData

importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.compat.ROI3DImageJImporter

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

importData(Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.ModelData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotDetectorData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotsCollectionData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotTrackerData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ijweka.datatypes.WekaModelData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ilastik.datatypes.IlastikModelData

importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.compat.IJ2DataFromImageWindowImageJImporter

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.ImageJ2DatasetData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.BorderImageJ2OutOfBoundsFactoryData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.ByteConstantValueImageJ2OutOfBoundsFactoryData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.DoubleConstantValueImageJ2OutOfBoundsFactoryData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.FloatConstantValueImageJ2OutOfBoundsFactoryData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.IntegerConstantValueImageJ2OutOfBoundsFactoryData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.LongConstantValueImageJ2OutOfBoundsFactoryData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.ShortConstantValueImageJ2OutOfBoundsFactoryData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.EmptyImageJ2OutOfBoundsFactory

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.MirrorImageJ2OutOfBoundsFactoryData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.PeriodicImageJ2OutOfBoundsFactoryData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.DiamondImageJ2ShapeData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.DiamondTipsImageJ2ShapeData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.EmptyImageJ2ShapeData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HyperSphereImageJ2ShapeData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.PairOfPointsImageJ2ShapeData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.RectangleImageJ2ShapeData

importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.ImagePlusDataFromImageWindowImageJImporter

importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.OMEImageFromImageWindowImageJImporter

importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.compat.RoiManagerImageJImporter

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorHSBData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorLABData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorRGBData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorHSBData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorLABData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorRGBData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale16UData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale32FData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale8UData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleMaskData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.ImagePlus2DData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorHSBData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorLABData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorRGBData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale16UData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale32FData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale8UData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleMaskData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.ImagePlus3DData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorHSBData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorLABData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorRGBData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale16UData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale32FData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale8UData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleMaskData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.ImagePlus4DData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorHSBData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorLABData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorRGBData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale16UData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale32FData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale8UData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleMaskData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.ImagePlus5DData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFT2DData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFT3DData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFT4DData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFT5DData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFTData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale16UData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale32FData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale8UData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleMaskData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.LUTData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.OMEImageData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Loads Roi from a path that contains a zip/roi file

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROAnnotationReferenceData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.omero.datatypes.OMERODatasetReferenceData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROGroupReferenceData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROImageReferenceData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROPlateReferenceData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROProjectReferenceData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.plots.datatypes.BarBoxAndWhiskerCategoryJFreeChartPlotData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.plots.datatypes.BarCategoryJFreeChartPlotData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.plots.datatypes.BarStatisticalCategoryJFreeChartPlotData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

importData(JIPipeReadDataStorage, Class<T>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotDataSeries

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.plots.datatypes.LineCategoryJFreeChartPlotData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.plots.datatypes.LineStatisticalCategoryJFreeChartPlotData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.plots.datatypes.LineXYJFreeChartPlotData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.plots.datatypes.Pie2DJFreeChartPlotData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.plots.datatypes.Pie3DJFreeChartPlotData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.plots.datatypes.ScatterXYJFreeChartPlotData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.plots.datatypes.StackedBarCategoryJFreeChartPlotData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.strings.JsonData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.strings.StringData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.strings.URIData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.strings.XMLData

importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.compat.ResultsTableDataImageJImporter

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.tables.datatypes.AnnotationTableData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.tables.datatypes.DoubleArrayTableColumnData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.tables.datatypes.FloatArrayTableColumnData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.tables.datatypes.RowIndexTableColumnData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.tables.datatypes.StringArrayTableColumnData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.tables.datatypes.ZeroTableColumnData

importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.utils.datatypes.JIPipeOutputData

ImportDataRowFolder - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

ImportDataRowFolder(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataRowFolder

ImportDataRowFolder(ImportDataRowFolder) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataRowFolder

ImportDataRun(Path, Class<? extends JIPipeData>, JIPipeDataTableRowInfo) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation.ImportDataRun

ImportDataTableArchive - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

ImportDataTableArchive(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableArchive

ImportDataTableArchive(ImportDataTableArchive) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableArchive

ImportDataTableDirectory - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

ImportDataTableDirectory(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableDirectory

ImportDataTableDirectory(ImportDataTableDirectory) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableDirectory

importExistingPlot(JFreeChartPlotData) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

Imports an existing plot data into this builder.

ImportFilamentsFromJsonAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.generate

ImportFilamentsFromJsonAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.ImportFilamentsFromJsonAlgorithm

ImportFilamentsFromJsonAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.ImportFilamentsFromJsonAlgorithm

ImportIlastikHDF5ImageAlgorithm - Class in org.hkijena.jipipe.plugins.ilastik.nodes

ImportIlastikHDF5ImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.ImportIlastikHDF5ImageAlgorithm

ImportIlastikHDF5ImageAlgorithm(ImportIlastikHDF5ImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.ImportIlastikHDF5ImageAlgorithm

ImportIlastikModel - Class in org.hkijena.jipipe.plugins.ilastik.nodes

ImportIlastikModel(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.ImportIlastikModel

ImportIlastikModel(ImportIlastikModel) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.ImportIlastikModel

ImportImageJPathDataDisplayOperation - Class in org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis

ImportImageJPathDataDisplayOperation() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImportImageJPathDataDisplayOperation

ImportImageJSampleAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io

ImportImageJSampleAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImageJSampleAlgorithm

ImportImageJSampleAlgorithm(ImportImageJSampleAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImageJSampleAlgorithm

ImportImageJSampleAlgorithm.Sample - Enum in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io

ImportImagePlusAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io

Loads an image data from a file via IJ.openFile()

ImportImagePlusAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImagePlusAlgorithm

ImportImagePlusAlgorithm(ImportImagePlusAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImagePlusAlgorithm

Copies the algorithm

importImagePlusFrom(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

importImages(ImportLibrary, OMEROMetadataStoreClient, ImportConfig, ImportCandidates) - Static method in class org.hkijena.jipipe.plugins.omero.util.OMEROUtils

Copy of importCandidates in ImportLibrary that returns the list of uploaded images.

ImportImpImageAlgorithm - Class in org.hkijena.jipipe.plugins.imp.nodes

ImportImpImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imp.nodes.ImportImpImageAlgorithm

ImportImpImageAlgorithm(ImportImpImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imp.nodes.ImportImpImageAlgorithm

importInputsFromImageJ(JIPipeGraphNode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration

Pushes selected ImageJ data into the algorithm input slots

ImportJIPipeProjectDataDisplayOperation - Class in org.hkijena.jipipe.plugins.utils.display

ImportJIPipeProjectDataDisplayOperation() - Constructor for class org.hkijena.jipipe.plugins.utils.display.ImportJIPipeProjectDataDisplayOperation

ImportJIPipeSlotFolderAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms

ImportJIPipeSlotFolderAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.ImportJIPipeSlotFolderAlgorithm

ImportJIPipeSlotFolderAlgorithm(ImportJIPipeSlotFolderAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.ImportJIPipeSlotFolderAlgorithm

ImportJsonAlgorithm - Class in org.hkijena.jipipe.plugins.strings.datasources

ImportJsonAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.strings.datasources.ImportJsonAlgorithm

ImportJsonAlgorithm(ImportJsonAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.strings.datasources.ImportJsonAlgorithm

ImportLegacyCellposeModelAlgorithm - Class in org.hkijena.jipipe.plugins.cellpose.legacy.algorithms

Deprecated.

ImportLegacyCellposeModelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.ImportLegacyCellposeModelAlgorithm

Deprecated.

ImportLegacyCellposeModelAlgorithm(ImportLegacyCellposeModelAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.ImportLegacyCellposeModelAlgorithm

Deprecated.

ImportLegacyCellposeSizeModelAlgorithm - Class in org.hkijena.jipipe.plugins.cellpose.legacy.algorithms

Deprecated.

ImportLegacyCellposeSizeModelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.ImportLegacyCellposeSizeModelAlgorithm

Deprecated.

ImportLegacyCellposeSizeModelAlgorithm(ImportLegacyCellposeSizeModelAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.ImportLegacyCellposeSizeModelAlgorithm

Deprecated.

importLUT(LUT, boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerLUTEditor

Imports a LUT into the editor.

importLUT(LUTData) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerLUTEditor

importLUT(LUT, boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerOpacityLUTEditor

Imports a LUT into the editor.

importLUT(LUTData) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerOpacityLUTEditor

ImportLUTAsRGBFromFileAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io

ImportLUTAsRGBFromFileAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportLUTAsRGBFromFileAlgorithm

ImportLUTAsRGBFromFileAlgorithm(ImportLUTAsRGBFromFileAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportLUTAsRGBFromFileAlgorithm

ImportOMEZARRFromURIAsImagePlusAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io

ImportOMEZARRFromURIAsImagePlusAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportOMEZARRFromURIAsImagePlusAlgorithm

ImportOMEZARRFromURIAsImagePlusAlgorithm(ImportOMEZARRFromURIAsImagePlusAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportOMEZARRFromURIAsImagePlusAlgorithm

ImportOMEZARRFromZipDirectoryAsImagePlusAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io

ImportOMEZARRFromZipDirectoryAsImagePlusAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportOMEZARRFromZipDirectoryAsImagePlusAlgorithm

ImportOMEZARRFromZipDirectoryAsImagePlusAlgorithm(ImportOMEZARRFromZipDirectoryAsImagePlusAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportOMEZARRFromZipDirectoryAsImagePlusAlgorithm

importParametersFromProject(JIPipeWorkbench) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm

importParametersFromProject(JIPipeWorkbench) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.JIPipeProjectParameterDefinition

importParametersFromProject(JIPipeWorkbench) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.PathsToJIPipeProjectParametersAlgorithm

ImportPretrainedCellpose2ModelAlgorithm - Class in org.hkijena.jipipe.plugins.cellpose.algorithms.cp2

ImportPretrainedCellpose2ModelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.ImportPretrainedCellpose2ModelAlgorithm

ImportPretrainedCellpose2ModelAlgorithm(ImportPretrainedCellpose2ModelAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.ImportPretrainedCellpose2ModelAlgorithm

ImportPretrainedCellpose3DenoiseModelAlgorithm - Class in org.hkijena.jipipe.plugins.cellpose.algorithms.cp3

ImportPretrainedCellpose3DenoiseModelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.ImportPretrainedCellpose3DenoiseModelAlgorithm

ImportPretrainedCellpose3DenoiseModelAlgorithm(ImportPretrainedCellpose3DenoiseModelAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.ImportPretrainedCellpose3DenoiseModelAlgorithm

ImportPretrainedCellpose3SegmentationModelAlgorithm - Class in org.hkijena.jipipe.plugins.cellpose.algorithms.cp3

ImportPretrainedCellpose3SegmentationModelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.ImportPretrainedCellpose3SegmentationModelAlgorithm

ImportPretrainedCellpose3SegmentationModelAlgorithm(ImportPretrainedCellpose3SegmentationModelAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.ImportPretrainedCellpose3SegmentationModelAlgorithm

ImportPretrainedOmnipose0ModelAlgorithm - Class in org.hkijena.jipipe.plugins.omnipose.algorithms

ImportPretrainedOmnipose0ModelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omnipose.algorithms.ImportPretrainedOmnipose0ModelAlgorithm

ImportPretrainedOmnipose0ModelAlgorithm(ImportPretrainedOmnipose0ModelAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omnipose.algorithms.ImportPretrainedOmnipose0ModelAlgorithm

ImportRDatasetAlgorithm - Class in org.hkijena.jipipe.plugins.r.algorithms

ImportRDatasetAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.r.algorithms.ImportRDatasetAlgorithm

ImportRDatasetAlgorithm(ImportRDatasetAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.r.algorithms.ImportRDatasetAlgorithm

ImportRDatasetAlgorithm.Dataset - Enum in org.hkijena.jipipe.plugins.r.algorithms

ImportRDatasetAlgorithm.DatasetEnumItemInfo - Class in org.hkijena.jipipe.plugins.r.algorithms

ImportResultsTableAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io

Imports ResultsTableData from a file

ImportResultsTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportResultsTableAlgorithm

ImportResultsTableAlgorithm(ImportResultsTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportResultsTableAlgorithm

ImportResultsTableAlgorithm.FileFormat - Enum in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io

ImportRoi2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io

Loads ROI data from a file via IJ.openFile()

ImportRoi2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportRoi2DAlgorithm

ImportRoi2DAlgorithm(ImportRoi2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportRoi2DAlgorithm

Copies the algorithm

ImportROI3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes

ImportROI3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.ImportROI3DAlgorithm

ImportROI3DAlgorithm(ImportROI3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.ImportROI3DAlgorithm

importROIs(ROI2DListData, boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

importROIsFromManager(boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

ImportStringAlgorithm - Class in org.hkijena.jipipe.plugins.strings.datasources

ImportStringAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.strings.datasources.ImportStringAlgorithm

ImportStringAlgorithm(ImportStringAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.strings.datasources.ImportStringAlgorithm

importTableFromCSV(Path, JIPipeDesktopProjectWorkbench) - Static method in class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopTableEditor

Imports a table from CSV and creates a new editor tab

ImportWekaModelFromFileAlgorithm - Class in org.hkijena.jipipe.plugins.ijweka.nodes

ImportWekaModelFromFileAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijweka.nodes.ImportWekaModelFromFileAlgorithm

ImportWekaModelFromFileAlgorithm(ImportWekaModelFromFileAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijweka.nodes.ImportWekaModelFromFileAlgorithm

ImportXMLAlgorithm - Class in org.hkijena.jipipe.plugins.strings.datasources

ImportXMLAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.strings.datasources.ImportXMLAlgorithm

ImportXMLAlgorithm(ImportXMLAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.strings.datasources.ImportXMLAlgorithm

ImposeMaxima2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

ImposeMaxima2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ImposeMaxima2DAlgorithm

Instantiates a new node type.

ImposeMaxima2DAlgorithm(ImposeMaxima2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ImposeMaxima2DAlgorithm

Instantiates a new node type.

ImposeMaxima3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

ImposeMaxima3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ImposeMaxima3DAlgorithm

Instantiates a new node type.

ImposeMaxima3DAlgorithm(ImposeMaxima3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ImposeMaxima3DAlgorithm

Instantiates a new node type.

ImpPlugin - Class in org.hkijena.jipipe.plugins.imp

Python nodes

ImpPlugin() - Constructor for class org.hkijena.jipipe.plugins.imp.ImpPlugin

INACTIVE_CONTROL_TEXT_COLOR - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

INACTIVE_CONTROL_TEXT_COLOR - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

include(RowFilter.Entry<? extends TableModel, ? extends Integer>) - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextTableFilter

include(RowFilter.Entry<? extends TableModel, ? extends Integer>) - Method in class org.hkijena.jipipe.desktop.commons.components.search.JIPipeDesktopExtendedDataTableSearchTextFieldTableRowFilter

include(RowFilter.Entry<? extends TableModel, ? extends Integer>) - Method in class org.hkijena.jipipe.desktop.commons.components.search.JIPipeDesktopSearchTextFieldTableRowFilter

includes(int, ROI3DMeasurement) - Static method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurement

includes(int, ROI3DRelationMeasurement) - Static method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurement

includes(int, ROI2DRelationMeasurement) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurement

includes(int, Measurement) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.Measurement

includes(int, RoiRelationMeasurement) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.RoiRelationMeasurement

increment(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJLogWrapper

increment(double, double) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm.HistogramBin

incrementProgress() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

Index() - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.Index

Creates a new instance.

Index(int, int) - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.Index

Creates a new instance and initializes it

IndexedDoublePoint - Class in org.hkijena.jipipe.plugins.tables.nodes.statistics

IndexedDoublePoint(int, double[]) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.IndexedDoublePoint

Build an instance wrapping a double array.

IndexedDoublePoint(int, int[]) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.IndexedDoublePoint

Build an instance wrapping an integer array.

indexOf(Object) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

indexOf(JIPipeRuntimePartition) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration

indexOf(Object) - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

InequalityPredicateOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

InequalityPredicateOperator(String, int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.InequalityPredicateOperator

info(Object, String) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROToJIPipeLogger

info(Object, LogMessage) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROToJIPipeLogger

inheritedSlot() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeOutputSlot

Deprecated.

initGlassPane(Point) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPane

initialise(int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines

Initialises the hough array.

initialise(Graphics2D, Rectangle2D, CategoryPlot, int, PlotRenderingInfo) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Initialises the renderer.

InitializationParameters() - Constructor for class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI.InitializationParameters

InitializationParameters(JIPipeDesktopWorkbench, JIPipeParameterTree, Object, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI.InitializationParameters

InitializationParameters(JIPipeDesktopWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI.InitializationParameters

initialize() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

initialize() - Method in class org.hkijena.jipipe.JIPipe

Initializes JIPipe.

initialize(JIPipeExtensionApplicationSettings, JIPipeRegistryIssues, boolean) - Method in class org.hkijena.jipipe.JIPipe

Initializes JIPipe

initialize() - Method in class org.hkijena.jipipe.JIPipeRunAlgorithmCommand

initialize(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OMEAccessorStorage

initializeAddDataSourceMenu(AbstractJIPipeDesktopGraphEditorUI, JPopupMenu, Set<JIPipeNodeInfo>) - Static method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel

Initializes a menu that adds data sources

initializeCLIJ(Context, boolean) - Static method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings

Initializes CLIJ based on the settings

initializeLibNoImageJ(List<Class<? extends JIPipeJavaPlugin>>) - Method in class org.hkijena.jipipe.JIPipe

Initializes JIPipe as part of a library with a custom initialization step No settings are loaded and SciJava services are not used.

initializeMenuForCategory(AbstractJIPipeDesktopGraphEditorUI, JPopupMenu, JIPipeNodeTypeCategory, Set<JIPipeNodeInfo>) - Static method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel

Initializes a menu for one algorithm category

initializeSettings(ImagePlus, ImagePlus, ImagePlus, AutoThresholdRegression.Implementation, boolean, boolean, boolean, boolean, boolean, boolean, boolean, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.CustomColoc2

initializeSourceAndTargetPoints(ImagePlus, double[][], double[][], TurboRegTransformationType) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegUtils

initializeVariablesIfNeeded() - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotFeatureVariablesInfo

initializeVariablesIfNeeded() - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackFeatureVariablesInfo

initializeVariablesIfNeeded() - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackSpotFeatureVariablesInfo

initTargetLine(int) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPane

InlinedJIPipeRunnable - Class in org.hkijena.jipipe.api

Helper class

InlinedJIPipeRunnable(String, Consumer<JIPipeProgressInfo>) - Constructor for class org.hkijena.jipipe.api.InlinedJIPipeRunnable

InnerMargin - Class in org.hkijena.jipipe.plugins.parameters.library.roi

Related to Margin, but with fixed-size objects

InnerMargin() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.InnerMargin

Creates a new instance

InnerMargin(double, double, double, double) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.InnerMargin

InnerMargin(InnerMargin) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.InnerMargin

Creates a copy

InnerMargin.List - Class in org.hkijena.jipipe.plugins.parameters.library.roi

List parameter of InnerMargin

InnerMarginEditorUIDesktop - Class in org.hkijena.jipipe.plugins.parameters.library.roi

Editor for FixedMargin

InnerMarginEditorUIDesktop(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.InnerMarginEditorUIDesktop

InpaintingAlgorithm - Class in org.hkijena.jipipe.plugins.opencv.nodes

InpaintingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.opencv.nodes.InpaintingAlgorithm

InpaintingAlgorithm(InpaintingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.opencv.nodes.InpaintingAlgorithm

InpaintingAlgorithm.Method - Enum in org.hkijena.jipipe.plugins.opencv.nodes

INPUT_PRETRAINED_MODEL - Static variable in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

INPUT_PRETRAINED_MODEL - Static variable in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

INPUT_PRETRAINED_MODEL - Static variable in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

INPUT_PRETRAINED_MODEL - Static variable in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

inputBlockDims(long[], int[]) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.ImgUtils

Compute block dimensions suitable for reading.

InputEntry(ImagePlus, List<JIPipeTextAnnotation>, JIPipeExpressionVariablesMap) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.InputEntry

InputImagesToMontage - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage

Deprecated.

InputImagesToMontage(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

InputImagesToMontage(InputImagesToMontage) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

InputImagesToMontage2 - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage

InputImagesToMontage2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage2

InputImagesToMontage2(InputImagesToMontage2) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage2

InputSlotMapParameterCollection - Class in org.hkijena.jipipe.plugins.parameters.library.graph

Parameter that holds a value for each data slot

InputSlotMapParameterCollection(Class<?>, JIPipeGraphNode, Function<JIPipeDataSlotInfo, Object>, boolean) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.graph.InputSlotMapParameterCollection

Creates a new instance

InputSlotMapParameterCollection(Class<?>, JIPipeGraphNode, Function<JIPipeDataSlotInfo, Object>) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.graph.InputSlotMapParameterCollection

Creates a new instance

InputSlotMapParameterCollection(Class<?>, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.graph.InputSlotMapParameterCollection

Creates a new instance

inputSlotsToPython(StringBuilder, Map<String, Path>) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

inputSlotsToR(StringBuilder, Map<String, Path>, List<JIPipeInputDataSlot>) - Static method in class org.hkijena.jipipe.plugins.r.RUtils

insert(Path) - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.FileChooserHistory

Set a new directory, adding it to the history.

insertAtCaret(String, boolean) - Method in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderUI

insertBrackets() - Method in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderUI

insertFunction(JIPipeExpressionRegistry.ExpressionFunctionEntry, List<ExpressionBuilderParameterUI>) - Method in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderUI

insertNode(UUID, JIPipeGraphNode, UUID) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Inserts an algorithm into the graph

insertNode(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Inserts a node into the graph.

insertNode(JIPipeGraphNode, UUID) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Inserts a node into the graph.

insertOperator(ExpressionOperatorEntry, List<ExpressionBuilderParameterUI>) - Method in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderUI

insertUpdate(DocumentEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopDocumentChangeListener

insertVariableAtCaret(String) - Method in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderUI

install() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataDisplayCacheControl

install() - Static method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueNotifier

Installs the notifier.

install() - Method in enum org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopUITheme

Activates the theme.

install(ImageJ2OpNode, ModuleItem<?>) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.DataSlotModuleInput

install(ImageJ2OpNodeInfo, ModuleItem<?>) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.DataSlotModuleInput

install(ImageJ2OpNode, ModuleItem<?>) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.DataSlotModuleOutput

install(ImageJ2OpNodeInfo, ModuleItem<?>) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.DataSlotModuleOutput

install(ImageJ2OpNodeInfo, ModuleItem<?>) - Method in interface org.hkijena.jipipe.plugins.imagej2.io.ImageJ2ModuleIO

Applies changes to an ImageJ2OpNodeInfo required for this IO

install(ImageJ2OpNode, ModuleItem<?>) - Method in interface org.hkijena.jipipe.plugins.imagej2.io.ImageJ2ModuleIO

Applies changes to an ImageJ2OpNode required for this IO

install(ImageJ2OpNodeInfo, ModuleItem<?>) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.ParameterImageJ2ModuleInput

install(ImageJ2OpNode, ModuleItem<?>) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.ParameterImageJ2ModuleInput

install(ImageJ2OpNodeInfo, ModuleItem<?>) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput

install(ImageJ2OpNode, ModuleItem<?>) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput

install(ImageJ2OpNodeInfo, ModuleItem<?>) - Method in class org.hkijena.jipipe.plugins.imagej2.io.ServiceImageJ2ModuleIO

install(ImageJ2OpNode, ModuleItem<?>) - Method in class org.hkijena.jipipe.plugins.imagej2.io.ServiceImageJ2ModuleIO

installAdapterCodeIfNeeded(JIPipePythonAdapterLibraryEnvironment, StringBuilder) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

installComponentHighlighter(JComponent, Set<Component>) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

installComponents(JFileChooser) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser.FileChooserComponentUI

installDefaults() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

InstallerEntry(Class<? extends JIPipeExternalEnvironmentInstaller>, Icon) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry.InstallerEntry

installEvents() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Install registration events.

installInputLoaderCode(StringBuilder) - Static method in class org.hkijena.jipipe.plugins.r.RUtils

installInputSlots(StringBuilder, JIPipeSingleIterationStep, JIPipeGraphNode, List<JIPipeInputDataSlot>, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

installInputSlots(StringBuilder, List<JIPipeInputDataSlot>, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

installInputSlots(StringBuilder, JIPipeMultiIterationStep, JIPipeGraphNode, List<JIPipeInputDataSlot>, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

installMenuExtension(JIPipeWorkbench, JMenu, JIPipeMenuExtensionTarget, boolean) - Static method in class org.hkijena.jipipe.utils.UIUtils

Installs an extension menu

installOutputGeneratorCode(StringBuilder) - Static method in class org.hkijena.jipipe.plugins.r.RUtils

installOutputSlots(StringBuilder, List<JIPipeOutputDataSlot>, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

installPostprocessorCode(StringBuilder) - Static method in class org.hkijena.jipipe.plugins.r.RUtils

installRefreshOnActivate(Runnable) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataDisplayCacheControl

installTool(MaskDrawer2DTool) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

installUIOverrideParameterEditor(JIPipeDesktopParameterFormPanel, JIPipeDesktopParameterEditorUI) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParametersAlgorithm

installUIOverrideParameterEditor(JIPipeDesktopParameterFormPanel, JIPipeDesktopParameterEditorUI) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

Allows to replace the UI that is inserted into the parameter panel with a different component Labels are not affected Please note that the root parameter collection handles this task for all sub-parameters

installUIParameterOptions(JIPipeDesktopParameterFormPanel, JIPipeDesktopParameterEditorUI, JPopupMenu) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParametersAlgorithm

installUIParameterOptions(JIPipeDesktopParameterFormPanel, JIPipeDesktopParameterEditorUI, JPopupMenu) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

Allows to install additional operations into the context menu of each parameter (triangle menu next to the help) Please note that the root parameter collection handles this task for all sub-parameters

INSTANCE - Static variable in class org.hkijena.jipipe.plugins.ij3d.imageviewer.Measurement3DSettings

INSTANCE - Static variable in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.GreyscaleColorSpace

INSTANCE - Static variable in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.HSBColorSpace

INSTANCE - Static variable in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.LABColorSpace

INSTANCE - Static variable in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.RGBColorSpace

INSTANCE - Static variable in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.Measurement2DSettings

INSTANCE - Static variable in class org.hkijena.jipipe.utils.NaturalOrderComparator

InstantFuture<T> - Class in org.hkijena.jipipe.utils

A dummy Future

InstantFuture(T) - Constructor for class org.hkijena.jipipe.utils.InstantFuture

Initializes a new instance

IntegerAndIntegerPairParameter - Class in org.hkijena.jipipe.plugins.parameters.library.pairs

A parameter that renames an integer into another integer

IntegerAndIntegerPairParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.IntegerAndIntegerPairParameter

Creates a new instance

IntegerAndIntegerPairParameter(int, int) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.IntegerAndIntegerPairParameter

IntegerAndIntegerPairParameter(IntegerAndIntegerPairParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.IntegerAndIntegerPairParameter

Creates a copy

IntegerAndIntegerPairParameter.List - Class in org.hkijena.jipipe.plugins.parameters.library.pairs

A collection of multiple IntegerAndIntegerPairParameter

IntegerArrayParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays

IntegerArrayParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.IntegerArrayParameterImageJ2ModuleInput

IntegerConstantValueImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant

IntegerConstantValueImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.IntegerConstantValueImageJ2OutOfBoundsFactoryData

IntegerConstantValueImageJ2OutOfBoundsFactoryData(OutOfBoundsConstantValueFactory<?, ?>) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.IntegerConstantValueImageJ2OutOfBoundsFactoryData

IntegerConstantValueImageJ2OutOfBoundsFactoryData(IntegerConstantValueImageJ2OutOfBoundsFactoryData) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.IntegerConstantValueImageJ2OutOfBoundsFactoryData

IntegerFormData - Class in org.hkijena.jipipe.plugins.forms.datatypes

IntegerFormData() - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.IntegerFormData

IntegerFormData(IntegerFormData) - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.IntegerFormData

IntegerFormGeneratorAlgorithm - Class in org.hkijena.jipipe.plugins.forms.algorithms.generators

IntegerFormGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.generators.IntegerFormGeneratorAlgorithm

IntegerFormGeneratorAlgorithm(IntegerFormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.generators.IntegerFormGeneratorAlgorithm

IntegerList - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.list

A list of Integer

IntegerList() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.list.IntegerList

Creates a new empty list

IntegerList(IntegerList) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.list.IntegerList

Creates a copy

IntegerParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives

IntegerParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.IntegerParameterImageJ2ModuleInput

IntegerParameterImageJ2ModuleOutput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives

IntegerParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.IntegerParameterImageJ2ModuleOutput

IntegerRange - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.ranges

Parameter that contains an integer range as string.

IntegerRange() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRange

Creates a new instance with a null value

IntegerRange(String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRange

Creates a new instance and initializes it

IntegerRange(IntegerRange) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRange

Creates a copy

IntegerRange.VariablesInfo - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.ranges

IntegerRangeDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.ranges

Editor for IntegerRange

IntegerRangeDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRangeDesktopParameterEditorUI

integral - Variable in enum org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetType

true for integers, false for floats.

IntegrateColumnsAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes

Algorithm that integrates columns

IntegrateColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.IntegrateColumnsAlgorithm

Creates a new instance

IntegrateColumnsAlgorithm(IntegrateColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.IntegrateColumnsAlgorithm

Creates a copy

IntegratingColumnOperationEntry(String, String, SummarizingColumnOperation) - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.IntegratingColumnOperationEntry

Creates a new entry

IntegratingTableColumnProcessorParameter - Class in org.hkijena.jipipe.plugins.tables.parameters.processors

A parameter that models processing an input column via an integration function and generating an output column

IntegratingTableColumnProcessorParameter() - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.processors.IntegratingTableColumnProcessorParameter

IntegratingTableColumnProcessorParameter(IntegratingTableColumnProcessorParameter) - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.processors.IntegratingTableColumnProcessorParameter

IntegratingTableColumnProcessorParameterList - Class in org.hkijena.jipipe.plugins.tables.parameters.collections

IntegratingTableColumnProcessorParameterList() - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.collections.IntegratingTableColumnProcessorParameterList

Creates a new instance

IntegratingTableColumnProcessorParameterList(IntegratingTableColumnProcessorParameterList) - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.collections.IntegratingTableColumnProcessorParameterList

Creates a copy

InternalErrorValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts

InternalErrorValidationReportContext() - Constructor for class org.hkijena.jipipe.api.validation.contexts.InternalErrorValidationReportContext

InternalErrorValidationReportContext(JIPipeValidationReportContext) - Constructor for class org.hkijena.jipipe.api.validation.contexts.InternalErrorValidationReportContext

InternalGradientSegmentation2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

Internal gradient segmenter

InternalGradientSegmentation2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

InternalGradientSegmentation2DAlgorithm(InternalGradientSegmentation2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

Copies the algorithm

InternalNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories

InternalNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory

InterpolationMethod - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.parameters

Available interpolation methods

InterruptedEvent(JIPipeRunnableWorker, Throwable) - Constructor for class org.hkijena.jipipe.api.run.JIPipeRunnable.InterruptedEvent

InterruptedEventEmitter() - Constructor for class org.hkijena.jipipe.api.run.JIPipeRunnable.InterruptedEventEmitter

interruptThreads(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Hough_Circle

intersect(JIPipeDesktopRectangularLine) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.connections.JIPipeDesktopRectangularLine

Returns number of pixels that intersect with another line

intersectROI(Roi, Roi) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

IntervalImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.data.input

Handling of Interval, assumed to be ImgPlus It is assumed that these refer to images (conversion to ImageJ2DatasetData)

IntervalImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.data.input.IntervalImageJ2ModuleInput

IntervalImageJ2ModuleOutput - Class in org.hkijena.jipipe.plugins.imagej2.io.data.output

Handling of Interval, assumed to be ImgPlus It is assumed that these refer to images (conversion to ImageJ2DatasetData)

IntervalImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.data.output.IntervalImageJ2ModuleOutput

IntNumberRangeParameter - Class in org.hkijena.jipipe.plugins.parameters.library.ranges

IntNumberRangeParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.ranges.IntNumberRangeParameter

IntNumberRangeParameter(IntNumberRangeParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.ranges.IntNumberRangeParameter

IntNumberRangeParameter(float, float) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.ranges.IntNumberRangeParameter

IntParameterTypeInfo - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Info for Integer

IntParameterTypeInfo() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.IntParameterTypeInfo

IntPrimitiveParameterTypeInfo - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Info for Integer

IntPrimitiveParameterTypeInfo() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.IntPrimitiveParameterTypeInfo

IntRangeAndIntegerPairParameter - Class in org.hkijena.jipipe.plugins.parameters.library.pairs

A parameter that renames an integer into another integer

IntRangeAndIntegerPairParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.IntRangeAndIntegerPairParameter

Creates a new instance

IntRangeAndIntegerPairParameter(IntRangeAndIntegerPairParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.IntRangeAndIntegerPairParameter

Creates a copy

IntRangeAndIntegerPairParameter.List - Class in org.hkijena.jipipe.plugins.parameters.library.pairs

A collection of multiple IntRangeAndIntegerPairParameter

INVALID_FILESYSTEM_CHARACTERS - Static variable in class org.hkijena.jipipe.utils.StringUtils

INVALID_JSONIFY_CHARACTERS - Static variable in class org.hkijena.jipipe.utils.StringUtils

invalidateAssets() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode

InvertColorsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

Wrapper around ImageProcessor

InvertColorsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.InvertColorsAlgorithm

Instantiates a new node type.

InvertColorsAlgorithm(InvertColorsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.InvertColorsAlgorithm

Instantiates a new node type.

InvertFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

InvertFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.InvertFunction

invertRGB(Color) - Static method in class org.hkijena.jipipe.utils.ColorUtils

invertRGBA(Color) - Static method in class org.hkijena.jipipe.utils.ColorUtils

invertSelection() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

InvertSelectionNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

InvertSelectionNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.InvertSelectionNodeUIContextAction

invokeMethod(Object, String, Object...) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

Calls a function and returns its output

invokeMuchLater(int, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils

invokeScrollToBottom(JScrollPane) - Static method in class org.hkijena.jipipe.utils.UIUtils

invokeScrollToTop(JScrollPane) - Static method in class org.hkijena.jipipe.utils.UIUtils

IOInterfaceAlgorithm - Class in org.hkijena.jipipe.api.compartments.algorithms

Algorithm that passes the input to the output

IOInterfaceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.compartments.algorithms.IOInterfaceAlgorithm

IOInterfaceAlgorithm(IOInterfaceAlgorithm) - Constructor for class org.hkijena.jipipe.api.compartments.algorithms.IOInterfaceAlgorithm

is2D() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

is2D() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

is2D() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageDimensions

is3D() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageDimensions

is4D() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageDimensions

is5D() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageDimensions

isAbove() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeatureFilterParameter

isAbove() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeatureFilterParameter

isAbsoluteCoordinates() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.Warp2DAlgorithm

isAbstractOrInterface(Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

isAccessPixels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm

isAccessPixels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm

isAccessPixels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm

isAccessPixels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm

isAccessPixels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm

isAccessPixels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm

isActivate() - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters

isActivated() - Method in interface org.hkijena.jipipe.JIPipePlugin

Returns true if the extension is activated.

isActive() - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

isActive() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

isActive() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

isActive() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

isActive() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

isAddAcknowledgements() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

isAddAnnotations() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.CountROIAlgorithm

isAddAsAnnotations() - Method in class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableByColumnsAlgorithm

isAddAuthors() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

isAddBorder() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm

isAddCitation() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

isAddContextActionsToContextMenu() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

isAddDependencies() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

isAddDependencyCitations() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

isAddDescription() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

isAddFileExtension() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

isAddGlobalParameters() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

isAddLastIdentityField() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm

isAddLastIdentityField() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm

isAddLastIdentityField() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm

isAddLicence() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

isAddListOfUsedNodes() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

isAddNameToTable() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm

isAddPipelineTextDescription() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

isAddSummary() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

isAddTitle() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

isAddToProject() - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderDialog

isAddToSelection() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.NodeUISelectedEvent

isAddUserDirectories() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

isAddWebsite() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

isAllChannels() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2ChannelSettings

isAllowCache() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

isAllowChangePanels() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.actions.JIPipeDesktopUpdateCacheAction

isAllowDefaultCollapsedParameters() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

isAllowEmptyIterationStep() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm

If true, allow the execution of an empty iteration step if all inputs are optional and are empty

isAllowEmptyIterationStep() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

If true, allow the execution of an empty iteration step if all inputs are optional and are empty

isAllowEmptyIterationStep() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm

If true, allow the execution of an empty iteration step if all inputs are optional and are empty

isAllowEmptyIterationStep() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateZeroImage

isAllowEmptyIterationStep() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateFromMathExpression2D

isAllowEmptyIterationStep() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

isAllowEmptyIterationStep() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromGlobalParametersAlgorithm

isAllowEmptyIterationStep() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm

isAllowEmptyIterationStep() - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListProjectsAlgorithm

isAllowEmptyIterationStep() - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListScreensAlgorithm

isAllowEmptyIterationStep() - Method in class org.hkijena.jipipe.plugins.tables.nodes.GenerateTableFromExpressionAlgorithm

isAllowMerging() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings

isAllowSkipAlgorithmsWithoutInput() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

isAllowUserModification() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

isAlwaysExportCompartmentOutputs() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings

isAnnotateWithChannelIndex() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsAlgorithm

Deprecated.

isAnnotateWithSlotName() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsAlgorithm

Deprecated.

isAnnotateWithValues() - Method in class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableIntoRowsAlgorithm

isAntialiased() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

isAntialiased() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

isAppend() - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters

isAppend() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ApplyExpressionToColumnsAlgorithm

Deprecated.

isAppend() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ConvertColumnsAlgorithm

isAppendDirectoryNameToTarget() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.CopyPath

isApplyDespeckle() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

isApplyDilation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologicalReconstruction2DAlgorithm

isApplyDilation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologicalReconstruction3DAlgorithm

isApplyFirstCLAHE() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

isApplyGaussian() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

isApplyInternalGradient() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

isApplyMerging() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

isApplyPerChannel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm

isApplyPerChannel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm

isApplyPerChannel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm

isApplyPerChannel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiCalculatorAlgorithm

isApplyPerFrame() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm

isApplyPerFrame() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm

isApplyPerFrame() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm

isApplyPerFrame() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiCalculatorAlgorithm

isApplyPerSlice() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm

isApplyPerSlice() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm

isApplyPerSlice() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConditionalInverterAlgorithm

isApplyPerSlice() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ImageToTableAlgorithm

isApplyPerSlice() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.MultipleImagesToTableAlgorithm

isApplyPerSlice() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm

isApplyPerSlice() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiCalculatorAlgorithm

isApplyPerSlice() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm

isApplyPerSlice() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm

isApplyPerSlice() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.HistogramGenerator

isApplySecondCLAHE() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

isApplyTiling() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling2DSettings

isApplyTiling() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling3DSettings

isApplyToAllPlanes() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings.ContrastEnhancerSettings

isApplyToAllPlanes() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.LUTInverterAlgorithm

isArray() - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

Returns true if the value is an array

isAskOnDeleteCompartment() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

isAskOnDeleteNode() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

isAskOnDeleteParameter() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

isAssembleTemplates() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

isAssignableTo(Class<?>, Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

More powerful variant of Class.isAssignableFrom that supports primitives.

isAttachOnlyNonDefaultParameterAnnotations() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings

isAttachOnlyNonDefaultParameterAnnotations() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

isAttachParameterAnnotations() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings

isAttachParameterAnnotations() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

isAugment() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationEnhancementSettings_Old

Deprecated.

isAutoAddAuthors() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

isAutoCalibrateAfterPulling() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings

isAutoClamp() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.SliceROIListAlgorithm

isAutoClamp() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm

Deprecated.

isAutoClamp() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2

isAutoConfigureAccelerationOnNextStartup() - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

isAutoDownload() - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

isAutoLabelOutputWithFileName() - Method in class org.hkijena.jipipe.plugins.filesystem.JIPipeFilesystemPluginApplicationSettings

isAutoLayoutMovesOtherNodes() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

isAutomaticallyAddToProjects() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectAuthorsApplicationSettings

isAutoMuteBySelection() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

isAutoMuteEdges() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

isAutoMuteEdgesEnabled() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

isAutoRemoveOutdatedCachedData() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

isAutoSaveLastDisplay() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

isAutoSaveLastImporter() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

isAutoScale() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

isAutoScale() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

isAutoScale() - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

isAutoShowProgress() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorLogPanel

isAutoShowResults() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorLogPanel

isAvoidGPUMemory() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNode

isAvoidLabelOnImage() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelParameters

isAvoidScaling() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.ImageParameters

isAvoidUnnecessaryScaling() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

isBalanceClasses() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.WekaClassifierSettings

isBeta() - Method in interface org.hkijena.jipipe.JIPipePlugin

Returns whether this extension is in beta testing.

isBeta() - Method in class org.hkijena.jipipe.plugins.ij3d.IJ3DPlugin

isBeta() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsPlugin

isBeta() - Method in class org.hkijena.jipipe.plugins.ijocr.OCRPlugin

isBeta() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.TrackMatePlugin

isBeta() - Method in class org.hkijena.jipipe.plugins.ilastik.IlastikPlugin

isBeta() - Method in class org.hkijena.jipipe.plugins.omero.OMEROPlugin

isBeta() - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePlugin

isBeta() - Method in class org.hkijena.jipipe.plugins.python.CorePythonPlugin

isBeta() - Method in class org.hkijena.jipipe.plugins.python.PythonPlugin

isBeta() - Method in class org.hkijena.jipipe.plugins.r.RPlugin

isBeta() - Method in class org.hkijena.jipipe.plugins.scene3d.Scene3DPlugin

isBinarize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.Voronoi2DAlgorithm

isBlackBackground() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

isBlackBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

isBlackBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.FindHoles2DAlgorithm

isBlackBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyFillHoles2DAlgorithm

isBlackToAlpha() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel

Deprecated.

isBookmarked() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

isBorderOpaque() - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopDropShadowRenderer

isBuffered() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

isBuildingCustomPanel() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

isBuildingCustomPanel() - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

isBuildingCustomPanel() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

isBuildingCustomPanel() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

isBuildingCustomPanel() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

isBuildingCustomPanel() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

isCanceled() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

isCancelled() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

isCancelled() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.BeforeAddParameterEvent

isCancelled() - Method in class org.hkijena.jipipe.plugins.forms.ui.FormsDialog

isCancelled() - Method in class org.hkijena.jipipe.utils.InstantFuture

isCancelled() - Method in class org.hkijena.jipipe.utils.OKCancelDialog

isCellEditable(int, int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

isCellEditable(int, int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

isCellEditable(int, int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableInfo

isCellEditable(int, int) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantTableModel

isCellEditable(int, int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableModel

isCellEditable(int, int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

isCellEditable(int, int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableModel

isCellEditable(int, int) - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerTableModel

isCellEditable(int, int) - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextTableModel

isCellEditable(int, int) - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

isCellEditable(int, int) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

isCellEditable(int, int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

isCenter() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanelImageComponent

isCenter() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopImageFrameComponent

isCenter() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawOvalRoiAlgorithm

Deprecated.

isCenter() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm

Deprecated.

isCenter() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

isCenterX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

isCenterY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.IteratingPythonScriptAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.MergingPythonScriptAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.PythonScriptAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.r.algorithms.IteratingRScriptAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.r.algorithms.MergingRScriptAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessIteratingAlgorithm

isCleanUpAfterwards() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessMergingAlgorithm

isCleanupOutputsAfterFailure() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

isCleanupOutputsAfterSuccess() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

isClearBeforeWrite() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.SetROI3DMetadataFromTableAlgorithm

isClearBeforeWrite() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata.SetImageMetadataFromTableAlgorithm

isClearBeforeWrite() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm

isClearBeforeWrite() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetROIMetadataFromTableAlgorithm

isClosed() - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore

Returns true if this object is closed and thus should not be used anymore

isCluster() - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationTweaksSettings

isCollapsed() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

isCollapsed() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetParameter

isCollapsed() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptParameter

isColorSelectedNodeEdges() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

isCommon(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData

Returns true if this data is commonly used (only for UI)

isCompactMode() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.DocumentTabComponent

isCompareAbsolute() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.HessianFeatureAlgorithm

isCompareAbsolute() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.Hessian2DAlgorithm

Deprecated.

isCompareAbsolute() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

isCompatible() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

Returns true if this artifact is compatible with the current system Includes non-native compatibility (e.g., x86 is compatible to amd64)

isComposite() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

isCompositeROI() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

isConcatenate() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

isConcatenate() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

isConcatenate() - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

isConcatenateDownsampledLayers() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

isConcatenateDownsampledLayers() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2TrainingTweaksSettings

isConcatenateDownsampledLayers() - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeTrainingTweaksSettings

isConfigured() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectAuthorsApplicationSettings

isConnectAcrossC() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

isConnectAcrossC() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

isConnectAcrossC() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

isConnectAcrossT() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

isConnectAcrossT() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

isConnectAcrossT() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

isConnectNewVerticesToStart() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm

isConnectOverDimensionLinear() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm

isConsumeOnOverlap() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

isConsumeOnOverlap() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

isContinueLoading() - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopInvalidProjectDependenciesInfoDialog

isContinueOnFailure() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

isContinueOnFailure() - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

isContinueOnFailure() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.ContinueOnFailureSettings

isConvertible(Class<? extends JIPipeData>, Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Returns true if the input data type can be converted into the output data type.

isCopyOriginalEdges() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm

isCopySlices() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm

isCopySlices() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

isCopySlices() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm

isCorePlugin() - Method in class org.hkijena.jipipe.api.compartments.JIPipeCompartmentsPlugin

isCorePlugin() - Method in class org.hkijena.jipipe.api.grouping.GroupingPlugin

isCorePlugin() - Method in class org.hkijena.jipipe.api.looping.LoopingPlugin

isCorePlugin() - Method in interface org.hkijena.jipipe.JIPipePlugin

Returns whether this extension is a core extension and thus cannot be disabled by users.

isCorePlugin() - Method in class org.hkijena.jipipe.plugins.artifacts.ArtifactsPlugin

isCorePlugin() - Method in class org.hkijena.jipipe.plugins.batchassistant.BatchAssistantPlugin

isCorePlugin() - Method in class org.hkijena.jipipe.plugins.core.CorePlugin

isCorePlugin() - Method in class org.hkijena.jipipe.plugins.dataenvironment.DataDirectoriesPlugin

isCorePlugin() - Method in class org.hkijena.jipipe.plugins.dev.DevelopmentPlugin

isCorePlugin() - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionPlugin

isCorePlugin() - Method in class org.hkijena.jipipe.plugins.graphannotation.GraphAnnotationPlugin

isCorePlugin() - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionLoaderPlugin

isCorePlugin() - Method in class org.hkijena.jipipe.plugins.multiparameters.MultiParameterAlgorithmsPlugin

isCorePlugin() - Method in class org.hkijena.jipipe.plugins.multiparameters.MultiParametersPlugin

isCorePlugin() - Method in class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplateBoxToolPlugin

isCorePlugin() - Method in class org.hkijena.jipipe.plugins.parameters.StandardParametersPlugin

isCorePlugin() - Method in class org.hkijena.jipipe.plugins.pipelinerender.PipelineRenderPlugin

isCorePlugin() - Method in class org.hkijena.jipipe.plugins.processes.ProcessesPlugin

isCorePlugin() - Method in class org.hkijena.jipipe.plugins.python.CorePythonPlugin

isCorePlugin() - Method in class org.hkijena.jipipe.plugins.settings.StandardSettingsPlugin

isCorePlugin() - Method in class org.hkijena.jipipe.plugins.tools.ToolsPlugin

isCorrectCorners() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm

isCorrespondingAuthor() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

isCostesSignificanceTest() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

isCreateCheckerboard() - Method in class org.hkijena.jipipe.plugins.imp.nodes.ConvertImpImageToImagePlusAlgorithm

isCreateComposite() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeChannelsAlgorithm

isCreatePyramid() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm

isCrop() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

isCrop() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

isCrop() - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

isCropC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

isCropC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm

isCropT() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode

isCropT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

isCropT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm

isCropXY() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode

isCropXY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

isCropXY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm

isCropZ() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode

isCropZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

isCropZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm

isCumulative() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator

isCumulative() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm

isCumulative() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

isCurrentlyDraggingConnection() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

isCurrentlyDraggingNode() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

isDampZ() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

isDark() - Method in enum org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopUITheme

isDarkBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologySkeletonize2DAlgorithm

isDarkBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm

isDarkBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm

isDarkBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm

isDarkBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm

isDarkBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm

isDarkBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm

isDarkBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm

isDarkLine() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

isDataFlavorSupported(DataFlavor) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneTabTransferable

isDeallocate() - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2PullAlgorithm

isDeduplicate() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

isDeleteMaskedLabels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByMaskAlgorithm

isDeprecated() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

isDeprecated() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewCompartmentNodeDatabaseEntry

isDeprecated() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry

isDeprecated() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry

isDeprecated() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodesByTemplateDatabaseEntry

isDeprecated() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry

isDeprecated() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry

isDeprecated() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry

isDeprecated() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo

isDeprecated() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

isDeprecated() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

Returns true if this node is deprecated

isDetachedProgress() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

Returns true if the progress was detached from the root progress

isDetailedDataString() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithDataString

isDetailedDataString() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.ToDataStringAlgorithm

isDirectory(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage

isDirectory(String) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage

Returns true if the element with given name is a directory

isDirectory(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage

Returns true if the element with given name is a directory

isDirectory() - Method in class org.hkijena.jipipe.plugins.parameters.library.filesystem.FileChooserBookmark

IsDirectoryFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.filesystem

IsDirectoryFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.filesystem.IsDirectoryFunction

isDisableOnUpdateCache() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.ContinueOnFailureSettings

isDisableResample() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationTweaksSettings

isDisableResample() - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationTweaksSettings

isDiscardExistingAnnotations() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithAnnotationTable

isDismiss() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction

isDisplayed() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

isDisplayedInForeignCompartment() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

isDisplayedInToolbar() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DeleteCompartmentUIContextAction

isDisplayedInToolbar() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DeleteNodeUIContextAction

isDisplayedInToolbar() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableNodeUIContextAction

isDisplayedInToolbar() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisablePassThroughNodeUIContextAction

isDisplayedInToolbar() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableNodeUIContextAction

isDisplayedInToolbar() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnablePassThroughNodeUIContextAction

isDisplayedInToolbar() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.IsolateNodesUIContextAction

isDisplayedInToolbar() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.LockNodeLocationSizeUIContextAction

isDisplayedInToolbar() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.LowerUIContextAction

isDisplayedInToolbar() - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeUIContextAction

Determines if the item should be displayed in the context toolbar

isDisplayedInToolbar() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RaiseUIContextAction

isDisplayedInToolbar() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SendToBackgroundUIContextAction

isDisplayedInToolbar() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SendToForegroundUIContextAction

isDisplayedInToolbar() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UnlockNodeLocationSizeUIContextAction

isDisplayedInToolbar() - Method in class org.hkijena.jipipe.plugins.nodetemplate.AddTemplateContextMenuAction

isDoCorrectPosition() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

isDoEstimateWidth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

isDoExtendLine() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

isDone() - Method in class org.hkijena.jipipe.utils.InstantFuture

isDoScaling() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter

isDoScaling() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm

isDrawArrowHeads() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

isDrawBorder() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.OverlayJIPipeDesktopColorIcon

isDrawEdges() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

isDrawFill() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.OverlayJIPipeDesktopColorIcon

isDrawFilledOutline() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm

isDrawFilledOutline() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm

isDrawHorizontal() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

isDrawHorizontal() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

isDrawImprovedEdges() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

isDrawLabel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

isDrawLabel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelParameters

isDrawLabels() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.DrawerLabelSettings

isDrawLabels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

isDrawLabelsOnHover() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

isDrawName() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer.LabelSettings

isDrawNodeShadows() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

isDrawOutline() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm

isDrawOutline() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm

isDrawOutline() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm

isDrawOutline() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm

isDrawOutsideEdges() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

isDrawOver() - Method in class org.hkijena.jipipe.plugins.ij3d.utils.Roi3DDrawer

isDrawOver() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm

isDrawOver() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

isDrawOver() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

isDrawOver() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

isDrawOverReference() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRGBAlgorithm

isDrawShadow() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopAnnotationGraphNodeUI

isDrawShadow() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

isDrawVertical() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

isDrawVertical() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

isDrawVertices() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

isDrawWithAntialiasing() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode

isDrawWithAntialiasing() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

isDrawWithAntialiasing() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode

isDrawWithAntialiasing() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ArrowAnnotationGraphNode

isDrawWithAntialiasing() - Method in class org.hkijena.jipipe.plugins.graphannotation.tools.ArrowAnnotationGraphNodeTool

isDuplicate() - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters

isDuplicate() - Method in class org.hkijena.jipipe.api.compat.ImageJImportParameters

isDuplicateImage() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings.ContrastEnhancerSettings

isDuplicateImage() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.LUTInverterAlgorithm

isDuplicateImage() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.RemoveLUTAlgorithm

isDuplicateImage() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorMapAlgorithm

isDuplicateImage() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm

isDuplicateImage() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromImageAlgorithm

isEdgesAreBackground() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ApplyDistanceTransform2DAlgorithm

isEditable() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.EdgeFeature

isEditable() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeature

isEditable() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeature

isEditable() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicEnumParameter

If this returns true, the user can freely edit the entry

isEditable() - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

isEmpty() - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache

isEmpty() - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache

isEmpty() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

isEmpty() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

isEmpty() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Returns true if no data is referenced

isEmpty() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

isEmpty() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox

isEmpty() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

isEmpty() - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

Returns true if the expression is empty

isEmpty() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

isEmpty() - Method in class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLText

isEmpty() - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

isEnable3D() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

isEnable3D() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

isEnable3D() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

isEnable3D() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

isEnable3D() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

isEnable3D() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

isEnable3DDenoising() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

isEnable3DSegmentation() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

isEnable3DSegmentation() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

isEnable3DSegmentation() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

isEnable3DSegmentation() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

isEnable3DSegmentation() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

isEnable3DSegmentation() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

isEnable3DSegmentation() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

isEnable3DSegmentation() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

isEnable3DSegmentation() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

isEnable3DSegmentation() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

isEnableBackups() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeBackupApplicationSettings

isEnabled() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

isEnabled() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

isEnabled() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotSeriesEditor

isEnabled() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

isEnabled() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings

isEnabled() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

isEnabled() - Method in class org.hkijena.jipipe.plugins.omero.parameters.AnnotationsToOMEROKeyValuePairExporter

isEnabled() - Method in class org.hkijena.jipipe.plugins.omero.parameters.OMEROKeyValuePairToAnnotationImporter

isEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameter

isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

Returns true if the default custom expression variables are shown in the UI (defaults to true)

isEnableFilter() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.FilterByAnnotation

isEnableFilter() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.FilterPaths

isEnableFilter() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm

isEnableFilter() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm

isEnableFiltering() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

isEnableGPU() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationModelSettings_Old

Deprecated.

isEnableGPU() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2GPUSettings

isEnableMultiChannel() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

isEnableMultiChannel() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

isEnableMultiChannel() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

isEnableNotifications() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

isEnableParallelization() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

isEnableTabContextMenu() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

isEnableWatershed() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm

isEnforceEdgesWithinMask() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

isEnforceEdgesWithinMask() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

isEnforceEdgesWithinMask() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

isEnforceOverlap() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings

isEnforceOverlap() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

isEnforceSameComponent() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

isEnforceSameComponent() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.SmoothFilamentsAlgorithm

isEnsureNoPathExists() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

isEqualHyperstackDimensions() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm

isEqualHyperstackDimensions() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

isEqualizeFrequencies() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm

isEqualizeReplicateLast() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNode

isEqualWidthAndHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm

isEqualWidthAndHeight() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

isEstimateHighThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

isEstimateLowThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

isEstimateSigma() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

isExcludeEdgeROIs() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

isExcludeEdges() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

isExcludeEdges() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm

isExcludeEdges() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

isExcludeExistingEndpoints() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

isExcludeOnEdges() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationThresholdSettings

isExcludeOnEdges() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm

isExcludeOnEdges() - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationThresholdSettings

isExcludeSelected() - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRunSettings

isExcludeZero() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByThicknessAlgorithm

isExcludeZero() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm

isExcludeZero() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm

isExcludeZero() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm

isExecutable(Path) - Static method in class org.hkijena.jipipe.utils.PathUtils

Checks if a file exists and is an executable

isExpandCanvas() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm

isExportAsDisplayed() - Method in class org.hkijena.jipipe.plugins.imageviewer.settings.LegacyImageViewer2DUIApplicationSettings

isExportAsROIFile() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm

Deprecated.

isExportAsROIFile() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm2

isExportFailedLoopInputs() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.ContinueOnFailureSettings

isExportFailedPartitionInputs() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.ContinueOnFailureSettings

isExportHeavyData() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings

isExportLightweightData() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings

isExportLoopIntermediateResults() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings

isExportLoopTerminating() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings

isExtendTarget() - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm

isExtendTarget() - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementMergingAlgorithm

isExtractRois() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

isExtractRois() - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

isFast() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi2DToRoi3DConverterAlgorithm

isFastMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer

isFastMode() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

isFastMode() - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationTweaksSettings

isFastSegmentDetection() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

isFile(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage

isFile(String) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage

Returns true if the element with given name is a file

isFile(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage

Returns true if the element with given name is a file

isFile(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage

IsFileFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.filesystem

IsFileFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.filesystem.IsFileFunction

isFilesystemCompatible(String) - Static method in class org.hkijena.jipipe.utils.StringUtils

Returns if the string does not contain invalid characters.

isFileSystemPathInitialized() - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeDataStorage

Returns true if the file system path is initialized.

isFileSystemPathInitialized() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage

isFileSystemPathInitialized() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage

isFileSystemPathInitialized() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage

isFileSystemPathInitialized() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPWriteDataStorage

isFillOutline() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm

isFillOutline() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm

isFillSpots() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer

isFilterListHideInvisible() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

isFilterListOnlySelected() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

isFilterListOnlySelected() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

isFindPath() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

IsFiniteFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.math

IsFiniteFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.math.IsFiniteFunction

isFirstAuthor() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

isFlattenC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.FlattenRoiAlgorithm

isFlattenT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.FlattenRoiAlgorithm

isFlattenZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.FlattenRoiAlgorithm

isFlip() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Reslicer

isFlipTemplateHorizontally() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

isFlipTemplateVertically() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

isFlipVertical() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ResliceAlgorithm

isFloatingPointOutput() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DAlgorithm

Deprecated.

isFloatingPointOutput() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DMergingAlgorithm

Deprecated.

isForce2D() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi2DToRoi3DConverterAlgorithm

isForce2D() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.SkeletonToFilaments2DAlgorithm

isForce2D() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DerivativesFeaturesAlgorithm

isForce2D() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.HessianFeatureAlgorithm

isForce2D() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.StructureFeatureAlgorithm

isForceFlowGraphSolver() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

isForceFlowGraphSolver() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

isForceFlowGraphSolver() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

isForceFlowGraphSolver() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings

isForceFlowGraphSolver() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

isForceGlobalTempDirectory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDataStorageProjectSettings

isForceMeshLengthUnit() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm

isForceMeshLengthUnit() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

isForceMeshLengthUnit() - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.MaskTo3DMeshAlgorithm

isForceNAIsAny() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

isForceNAIsAny() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

isForceName() - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter

isForceName() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter2

isForceNativeImport() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

isForceNativeImport() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImagePlusAlgorithm

isForcePassThroughLoopIterationInCaching() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

isForceReflection() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

isForceRGB() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

isFromExtension() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

isFullPath() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimplePathAnnotationGenerator

isFunctional() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

isGenerateCachePreviews() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

isGenerateConnectedComponents() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

isGenerateConnectedComponents() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2TrainingTweaksSettings

isGenerateConnectedComponents() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

isGenerateConnectedComponents() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTrainingTweaksSettings

isGenerateConnectedComponents() - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeTrainingTweaksSettings

isGenerateOnePerBatch() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

isGenerateOnePerBatch() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingZeroImage

isGenerateResultPreviews() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

isGeneratingTableColumn(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.plugins.tables.datatypes.TableColumnData

Returns true if the parameter is a generating table column.

isGetDams() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm

isGPUCompatible(JIPipeArtifactAccelerationPreference, Vector2iParameter) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

isGraphAnnotationsLocked() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

isGrayscale() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

Returns true if the image is grayscale

isGreyscale(Color) - Static method in class org.hkijena.jipipe.utils.ColorUtils

isGreyscaleCorrection() - Method in class org.hkijena.jipipe.plugins.imp.nodes.ImportImpImageAlgorithm

isGrouping() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

isHasNotifications() - Method in class org.hkijena.jipipe.desktop.commons.notifications.JIPipeDesktopWorkbenchNotificationInboxUI

isHasParameterSlot() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings

isHasVerticalGlue() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

isHeavy(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData

Returns true if this data is considered as having a large size

isHeavy() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo

isHidden(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData

Returns true if this data should be be accessible by the user

isHidden() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo

isHidden() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

isHidden() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess

isHidden() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo

isHidden() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

isHidden() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

Returns true if this algorithm should not appear in the list of available algorithms.

isHidden() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess

isHidden() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess

isHidden() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

isHidden() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess

Returns if the parameter should be hidden from the user

isHidden() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

isHidden() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

isHidden(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Returns true if the data type with given ID is hidden

isHidden() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIDownContextAction

isHidden() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUILeftContextAction

isHidden() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIRightContextAction

isHidden() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIUpContextAction

isHidden() - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeUIContextAction

Determines if the item is never shown (even if it applies) Keyboard shortcuts still work

isHidden() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

isHidden() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

isHidden() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo

isHidden() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo

isHidden() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

isHidden() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameterItemParameterAccess

isHidden() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterInputAccess

isHidden() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterOutputAccess

isHidden() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterParameterAccess

isHidden() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

isHidden() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterKeyAccess

isHidden() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterValueAccess

isHidden() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableCellAccess

isHidden() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2AlgorithmInfo

isHiddenLocalParameter(JIPipeParameterTree, JIPipeParameterAccess, String...) - Static method in class org.hkijena.jipipe.utils.ParameterUtils

Returns true if the provided parameter is local (i.e. only shown if its not a sub-parameter) and therefore should be hidden

isHiddenLocalParameterCollection(JIPipeParameterTree, JIPipeParameterCollection, String...) - Static method in class org.hkijena.jipipe.utils.ParameterUtils

Returns true if the collection is not a direct child of the tree root

isHideLabels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings

isHideLabels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings

isHideText() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

isHideToolbars() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

isHollowVertices() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

isHollowVertices() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

isHyperstack() - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

isHyperstack() - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

isIgnoreAnnotationColumnsOnTrivialMatch() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

isIgnoreC() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

isIgnoreC() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm

isIgnoreC() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

isIgnoreC() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

isIgnoreC() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

isIgnoreC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

isIgnoreC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

isIgnoreC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

isIgnoreC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

isIgnoreC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

isIgnoreC() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

isIgnoreCustomParameters() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

isIgnoreDeactivatedInputs() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

If true, the run will ignore cascading checks for deactivated inputs and run any node, that is not explicitly deactivated.

isIgnoreDeclaration() - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.PrettifyXMLAlgorithm

isIgnoreEmptyTables() - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm

isIgnoreErrors() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process.OutlineRoi3DAlgorithm

isIgnoreIfHasPath() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

isIgnoreImportedDataAnnotations() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableArchive

isIgnoreImportedDataAnnotations() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableDirectory

isIgnoreImportedDataAnnotations() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.ImportJIPipeSlotFolderAlgorithm

isIgnoreImportedTextAnnotations() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableArchive

isIgnoreImportedTextAnnotations() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableDirectory

isIgnoreImportedTextAnnotations() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.ImportJIPipeSlotFolderAlgorithm

isIgnoreInputDataAnnotations() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableArchive

isIgnoreInputDataAnnotations() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableDirectory

isIgnoreInputDataAnnotations() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.ImportJIPipeSlotFolderAlgorithm

isIgnoreInputTextAnnotations() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableArchive

isIgnoreInputTextAnnotations() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableDirectory

isIgnoreInputTextAnnotations() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.ImportJIPipeSlotFolderAlgorithm

isIgnoreInvalidSlices() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

isIgnoreInvalidValues() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.AnnotationsToParametersAlgorithm

isIgnoreLimitConnectionsForSource() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

isIgnoreLimitConnectionsForSource() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

isIgnoreLimitConnectionsForTarget() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

isIgnoreLimitConnectionsForTarget() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

isIgnoreMissingAnnotations() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractDataAnnotation

isIgnoreMissingAnnotations() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm

isIgnoreMissingChannels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm

isIgnoreMissingChannels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsAlgorithm

Deprecated.

isIgnoreMissingChannels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

isIgnoreMissingColumns() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm

isIgnoreMissingImages() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

isIgnoreMissingOutputs() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

isIgnoreMissingRoiIndices() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.SetROI3DMetadataFromTableAlgorithm

isIgnoreMissingRoiIndices() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetROIMetadataFromTableAlgorithm

isIgnoreMissingSheets() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportResultsTableAlgorithm

isIgnoreMissingSlices() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm

isIgnoreNodeFunctionalEquals() - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache

isIgnoreNon2DEdges() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm

isIgnorePreActivationChecks() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeExtensionApplicationSettings

isIgnoreReflectionParameters() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

isIgnoreT() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

isIgnoreT() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm

isIgnoreT() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

isIgnoreT() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

isIgnoreT() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

isIgnoreT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

isIgnoreT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

isIgnoreT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

isIgnoreT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

isIgnoreT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

isIgnoreT() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

isIgnoreValidation() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.RunJIPipeProjectAlgorithm

isIgnoreZ() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

isIgnoreZ() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

isIgnoreZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

isIgnoreZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

isIgnoreZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

isIgnoreZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

isIgnoreZ() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

isIgnoreZero() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm

isImmutable() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.FormData

Return true if this form data is replaceable via the "Apply to ..." function

isImportant() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess

isImportant() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess

isImportant() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess

isImportant() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

isImportant() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess

Returns true if the parameter should be marked in the UI as important

isImportant() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

isImportant() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameterItemParameterAccess

isImportant() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterInputAccess

isImportant() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterOutputAccess

isImportant() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterParameterAccess

isImportant() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

isImportant() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterKeyAccess

isImportant() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterValueAccess

isImportant() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableCellAccess

isImproved() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.SymmetryFilter3DAlgorithm

isIncludeHoles() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

isIncludeRowInDisplayName() - Method in interface org.hkijena.jipipe.desktop.api.data.JIPipeDesktopDataDisplayOperation

If true, the information about the row and data annotation is included in the display name

isIncludeRowInDisplayName() - Method in class org.hkijena.jipipe.plugins.core.data.DefaultDataDisplayOperation

isIncomplete() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Returns true if there is at least one slot that has no rows attached to it

isIndexMeshes() - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm

Deprecated.

isIndexMeshes() - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm2

isIndexMeshes() - Method in class org.hkijena.jipipe.plugins.scene3d.utils.Scene3DToColladaExporter

IsInfiniteFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.math

IsInfiniteFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.math.IsInfiniteFunction

isInGlobal(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

isInitialized() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

isInitializing() - Method in class org.hkijena.jipipe.JIPipe

isInitZ() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXInitializationParameters

isInProject(JIPipeNodeTemplate, JIPipeProject) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

isInput() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot

isInput() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

isInput() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

isInputIsEDM() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm

isInputMasks() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

isInputSlotsSealed() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

isInputSlotsSealed() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

isInserterCommitted() - Method in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderInserterUI

isInstanceOfAny(Object, Class<?>...) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

isInstantiated() - Static method in class org.hkijena.jipipe.JIPipe

isIntensityHistogram2D() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

isInterpolate() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationEnhancementSettings_Old

Deprecated.

isInterpolate() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationTweaksSettings

isInterpolate() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTweaksSettings

isInterpolate() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationParameters

isInterpolate() - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationTweaksSettings

isInverse() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.binary.DistanceMap3DAlgorithm

isInverse() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.binary.ErodedVolumeFraction3DAlgorithm

isInvert() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2ChannelSettings

isInvert() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

isInvert() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.BinarizeAlgorithm

isInvert() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.FrangiVesselnessFeatures

isInvert() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures

isInvert() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings

isInvert() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm

Deprecated.

isInvert() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

isInvertThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.MaskToRoiAlgorithm

isInvertThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator

isInvertThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator

isInvertThreshold() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator

isInvertTransform() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.Warp2DAlgorithm

isIsotropicGaussian() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DerivativesFeaturesAlgorithm

isIsotropicGaussian() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.HessianFeatureAlgorithm

isIsotropicGaussian() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.StructureFeatureAlgorithm

isIteratePerC() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

isIteratePerT() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

isIteratePerZ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

isKeepAnnotationColumns() - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.ConvertAnnotationTableToAnnotatedTables

isKeepCurrentAnnotation() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractDataAnnotation

isKeepDataAnnotations() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.DataAnnotationToStringAnnotation

isKeepOriginalAnnotations() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm

isKeepOriginalAnnotations() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm

isKeepOriginalAnnotations() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm

isKeepOriginalAnnotations() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm

isKeepOtherDataAnnotations() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractDataAnnotation

isKeepSameChannelCount() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm

isKeepValues() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByIdAlgorithm

isKendallTauRankCorrelation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

isKnownDependency(String) - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

isLabelAll() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

isLabeling() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.HysteresisSegmentation3DAlgorithm

isLabels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

isLayoutAfterAlgorithmFinder() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

isLayoutAfterConnect() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

isLeftPanelIsFloating() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

isLeftPanelVisible() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

isLegacy() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItemCollection

isLiHistogramChannel1() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

isLiHistogramChannel2() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

isLiICQ() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

isLimitWithEllipsis() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelParameters

isLink() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.ImportIlastikModel

isLinked() - Method in class org.hkijena.jipipe.plugins.ilastik.datatypes.IlastikModelData

isLoaded() - Method in class org.hkijena.jipipe.JIPipeJavaExtensionInitializationInfo

isLoadFromArtifact() - Method in class org.hkijena.jipipe.api.environments.JIPipeArtifactEnvironment

isLoadFromCache() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

isLoadFromCache() - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRunSettings

isLocal() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

isLogarithmic() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.TrackRenderer

isLogarithmic() - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI.TrackRenderer

isLogSilent() - Method in interface org.hkijena.jipipe.api.run.JIPipeRunnable

Determines if this run is being logged silently

isLogToStdOut() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

isMakeFilesystemCompatible() - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter

isMandersCorrelation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

isMaximizeWindows() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

isMeanVisible() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Returns the flag that controls whether or not the mean indicator is draw for each item.

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.Measurement3DSettings

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DStatisticsAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ColorRoi3DByStatisticsAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ExtractLabelStatisticsAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractROIProfileAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.EnlargeShrinkRoiAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MeasurementDrawerPlugin2D.Settings

isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.Measurement2DSettings

isMedianVisible() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Returns the flag that controls whether or not the median indicator is draw for each item.

isMergeAnnotations() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.ExtractTableAlgorithm

isMergeInputAnnotations() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithData

isMergeLabelAnnotations() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithData

isMergeToLargerLabel() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm

isModelPretrained() - Method in class org.hkijena.jipipe.plugins.cellpose.utils.CellposeModelInfo

isModern() - Method in enum org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopUITheme

isMouseIsEntered() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

isMultiple() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathFromUserDataSource

isMustExist() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectDirectories.DirectoryEntry

isMutableTableColumn(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.plugins.tables.datatypes.TableColumnData

Returns true if the parameter is a mutable table column.

IsNaNFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.math

IsNaNFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.math.IsNaNFunction

isNative() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

Returns true if the artifact is perfectly compatible with the current system (excludes translation layers like x86 to amd64)

isNeedsToExist() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileDataSource

isNeedsToExist() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderDataSource

isNeedsToExist() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathDataSource

isNetAverage() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationEnhancementSettings_Old

Deprecated.

isNetAverage() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationTweaksSettings

isNetAverage() - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationTweaksSettings

isNeverAskOnClosingTabs() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

isNewPlugin() - Method in class org.hkijena.jipipe.desktop.app.plugins.pluginsmanager.JIPipeDesktopPluginManagerUI.PluginEntry

isNodeRunnable() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

isNoInterpolate() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Reslicer

isNoInterpolation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ResliceAlgorithm

isNoLUT() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEExporterSettings

isNormalize() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationEnhancementSettings_Old

Deprecated.

isNormalize() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationTweaksSettings

isNormalize() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTweaksSettings

isNormalize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve.ConvolveByImage2DAlgorithm

isNormalize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve.ConvolveByParameter2DAlgorithm

isNormalize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap2DAlgorithm

isNormalize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap3DAlgorithm

isNormalize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.GeodesicDistanceMap2DAlgorithm

isNormalize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.LabelChamferDistanceMap3DAlgorithm

isNormalize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.HistogramGenerator

isNormalize() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator

isNormalize() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm

isNormalize() - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

isNormalizeContrast() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm

isNotifyInvalidDragAndDrop() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

isNoWindows() - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters

IsNullFunction - Class in org.hkijena.jipipe.plugins.expressions.functions

IsNullFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.IsNullFunction

isNullOrEmpty(Object) - Static method in class org.hkijena.jipipe.utils.StringUtils

Returns true if the string is null or empty

isNumeric() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.DoubleArrayTableColumnData

isNumeric() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.FloatArrayTableColumnData

isNumeric() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RelabeledTableColumnData

isNumeric() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RowIndexTableColumnData

isNumeric() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.StringArrayTableColumnData

isNumeric() - Method in interface org.hkijena.jipipe.plugins.tables.datatypes.TableColumnData

Returns true if this column contains double entries.

isNumeric() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ZeroTableColumnData

isNumeric() - Method in class org.hkijena.jipipe.plugins.tables.TableColumnDataReference

isNumericColumn(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Returns true if a column is numeric

isNumericColumn(String) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

IsolateNodesUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

IsolateNodesUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.IsolateNodesUIContextAction

isOneBasedPositions() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

isOneBasedPositions() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

isOneBasedPositions() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

isOneBasedPositions() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

isOneBasedPositions() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

isOnlyActiveImage() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ImagePlusFromGUI

isOnlyFirst() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

isOnlyIfPossible() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnToNumericAlgorithm

isOnlyPinned() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

isOnlyPredecessors() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.actions.JIPipeDesktopUpdateCacheAction

isOnlySameComponent() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.RemoveDuplicateVerticesAlgorithm

isOpenAllSeries() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

isOpenDataWindowsAlwaysOnTop() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

isOpenUtilityWindowsAlwaysOnTop() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

isOptional() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

isOutput() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot

isOutput() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

isOutput() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

isOutput32bit() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm

isOutputBlockwiseObjectPredictions() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters

isOutputBlockwiseObjectPredictions() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters

isOutputBlockwiseObjectPredictions() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters

isOutputBlockwiseObjectProbabilities() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters

isOutputBlockwiseObjectProbabilities() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters

isOutputBlockwiseObjectProbabilities() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters

isOutputBranchTable() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters

isOutputCoherency() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm.OutputParameters

isOutputCoherency() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm.OutputParameters

isOutputCoherency() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm.OutputParameters

isOutputEmptyLists() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm

isOutputEmptyLists() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm

isOutputEmptyLists() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm

isOutputEmptyLists() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm

isOutputEmptyLists() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm

isOutputEnergy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm.OutputParameters

isOutputEnergy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm.OutputParameters

isOutputEnergy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm.OutputParameters

isOutputFeatures() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters

isOutputFeatures() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters

isOutputFeatures() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters

isOutputFeatures() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters

isOutputFeaturesStage1() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

isOutputFeaturesStage2() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

isOutputFiles() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.FilterPaths

isOutputFlows() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationOutputSettings_Old

Deprecated.

isOutputFlowsD() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationOutputSettings

isOutputFlowsXY() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationOutputSettings

isOutputFlowsZ() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationOutputSettings

isOutputFolders() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.FilterPaths

isOutputGradientX() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm.OutputParameters

isOutputGradientY() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm.OutputParameters

isOutputHarrisIndex() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm.OutputParameters

isOutputInputStage1() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

isOutputInputStage2() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

isOutputLabels() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationOutputSettings_Old

Deprecated.

isOutputLabels() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationOutputSettings

isOutputLabels() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters

isOutputLabelsStage1() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

isOutputLabelsStage2() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

isOutputLargestShortestPaths() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters

isOutputMatchedTemplates() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

isOutputNonExisting() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.FilterPaths

isOutputObjectPredictions() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters

isOutputObjectPredictions() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters

isOutputObjectPredictions() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters

isOutputObjectProbabilities() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters

isOutputObjectProbabilities() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters

isOutputObjectProbabilities() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters

isOutputOrientation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm.OutputParameters

isOutputOrientation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm.OutputParameters

isOutputOrientation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm.OutputParameters

isOutputOutputFolder() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessIteratingAlgorithm

isOutputOutputFolder() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessMergingAlgorithm

isOutputOverlaps() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

isOutputOverlaps() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings

isOutputOverlaps() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

isOutputPixelProbabilities() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters

isOutputPixelProbabilities() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters

isOutputPixelProbabilities() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters

isOutputPolarCoordinates() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm

isOutputPolarCoordinates() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm

isOutputPolarCoordinates() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm

isOutputProbabilities() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationOutputSettings_Old

Deprecated.

isOutputProbabilities() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationOutputSettings

isOutputProbabilities() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters

isOutputProbabilitiesAllStages() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

isOutputProbabilitiesStage1() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

isOutputProbabilitiesStage2() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

isOutputProbabilityMaps() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaClassification2DAlgorithm

isOutputProbabilityMaps() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaClassification3DAlgorithm

isOutputROI() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationOutputSettings_Old

Deprecated.

isOutputROI() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationOutputSettings

isOutputRoi() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm

isOutputSimpleSegmentation() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters

isOutputSimpleSegmentationStage1() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

isOutputSimpleSegmentationStage2() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

isOutputSkeletonLabels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters

isOutputSkeletonTable() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters

isOutputSlotsSealed() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

isOutputSlotsSealed() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

isOutputStyles() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationOutputSettings_Old

Deprecated.

isOutputTaggedSkeletons() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters

isOutputUncertainty() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters

isOutputUncertaintyStage1() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

isOutputUncertaintyStage2() - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

isOutputWarnings() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

isPadded() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEExporterSettings

isPaintNodeShadow() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode

isPaintNodeShadow() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode

isPaintNodeShadow() - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ArrowAnnotationGraphNode

isPaintScrollArea - Variable in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPane

isParameterAnnotationsUseInternalNames() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings

isParameterAnnotationsUseInternalNames() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.environments.JIPipeArtifactEnvironment

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.environments.JIPipeProcessArtifactEnvironment

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.grouping.JsonAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

Allows to override the visibility of parameters inside the UI

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

Allows to override the visibility of sub-parameters inside the UI

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectMetadataSettingsSheetWrapper

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectMetadataSettingsSheetWrapper

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectParametersSettingsSheetWrapper

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectParametersSettingsSheetWrapper

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectPermissionsSettingsSheetWrapper

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectPermissionsSettingsSheetWrapper

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.desktop.app.settings.project.JIPipeDesktopMergedProjectSettings

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SimplifyAnnotationsAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationModelSettings_Old

Deprecated.

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseSettings

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNode

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.plugins.forms.algorithms.IteratingFormProcessorAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.plugins.forms.algorithms.MergingFormProcessorAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.plugins.forms.algorithms.SimpleIteratingFormProcessorAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo16BitAutoContrastAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo8BitAutoContrastAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImage2Algorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.InpaintingAlgorithm

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.python.PythonEnvironment

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.python.PythonPackageLibraryEnvironment

isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.plugins.r.REnvironment

isPassThrough() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

isPerProjectTempDirectory() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

isPhysicalSizes() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm

isPhysicalSizes() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

isPhysicalSizes() - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.MaskTo3DMeshAlgorithm

isPinned() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

isPinned() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess

Returns true if the parameter is pinned to the top

isPinned() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

isPixelsUnit(String) - Static method in class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

isPluginTemplate(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

isPolarCoordinates() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.Warp2DAlgorithm

isPostprocessor() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

Indicates if the node should be run after all other nodes.

isPreciseColocalization() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

isPreciseColocalization() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm

isPreciseColocalization() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

isPreciseColocalization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm

isPreferAssociatedImage() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm

isPreferAssociatedImage() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

isPreferCustomDownloader() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDownloadsApplicationSettings

isPreferIsotropicFilter() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersAlgorithm

isPreferRenderViaOverlay() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

isPreferRenderViaOverlay() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

isPreprocessor() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

Indicates if the node should be run before all other nodes.

isPresent() - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore

isPresent() - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter.LambdaSubscriber

isPresent() - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter.StrongObjectSubscriber

isPresent() - Method in interface org.hkijena.jipipe.api.events.JIPipeEventEmitter.Subscriber

isPresent() - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter.WeakObjectSubscriber

isPresent() - Method in class org.hkijena.jipipe.utils.data.OwningStore

isPresent() - Method in interface org.hkijena.jipipe.utils.data.Store

Returns true if the stored data is present

isPresent() - Method in class org.hkijena.jipipe.utils.data.WeakStore

isPreSmoothing() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm

isPretrained() - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData

isPretrained() - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData.Metadata

isPretrained() - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData

isPretrained() - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData.Metadata

isPreventAddingDeletingNodes() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectPermissions

isPreventModifyingSlots() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectPermissions

isPreventUpdateSlots() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

isPrimitiveWrapperOf(Class<?>, Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

Returns true if the class is a primitive wrapper

isProcessing3D() - Method in class org.hkijena.jipipe.plugins.ijweka.datatypes.WekaModelData.Metadata

isProcessing3D() - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.ImportWekaModelFromFileAlgorithm

isProjectAllHyperstackTimePoints() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm

isProjectCompartmentGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

isProjectGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

isProjectModified() - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

isProjectModified() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopDummyWorkbench

isProjectModified() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

isProjectModified() - Method in interface org.hkijena.jipipe.desktop.app.JIPipeDesktopWorkbench

Method that returns whether the underlying project was modified

isProvidedByEnvironment() - Method in class org.hkijena.jipipe.plugins.python.PythonPackageLibraryEnvironment

isQuadrantSwapNeeded() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo

isRadians() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm

isRadians() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

isRadians() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm

isRead() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableLogEntry

isRecalibrate() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.DivideByMaximumAlgorithm

isRecursive() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListFiles

isRecursive() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListSubfolders

isRecursiveFollowsLinks() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListFiles

isRecursiveFollowsLinks() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListSubfolders

isRedirectImage() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Returns true if an image is selected in the "Redirect To:" popup menu of the Analyze/Set Measurements dialog box.

isRegistered(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

isReinterpret() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color.ColorSpaceConverterAlgorithm

isRelativeDistances() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm

isRelativeDistances() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm

isRelativeDistances() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm

isRelativeToProjectDir() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter

isRelativeToProjectDir() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataTableByParameter

isRelativeToProjectDir() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.ExportROI3DAlgorithm

Deprecated.

isRelativeToProjectDir() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

isRelativeToProjectDir() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm

Deprecated.

isRelativeToProjectDir() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm

Deprecated.

isRelativeToProjectDir() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm

Deprecated.

isRelativeToProjectDir() - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm

Deprecated.

isRelativizePaths() - Method in class org.hkijena.jipipe.plugins.filesystem.JIPipeFilesystemPluginApplicationSettings

isRememberSettings() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToFilesByMetadataExporterRun.Settings

isRemoveColumn() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveArrayAnnotationsAlgorithm

isRemoveDuplicates() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

isRemoveExtensions() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimplePathAnnotationGenerator

isRemoveInX() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm

isRemoveInX() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.RemoveBorderFilaments

isRemoveInY() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm

isRemoveInY() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.RemoveBorderFilaments

isRemoveInZ() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm

isRemoveInZ() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.RemoveBorderFilaments

isRemoveLut() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

isRemoveLut() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImagePlusAlgorithm

isRemoveNegativeValues() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm

isRemoveOutputAnnotations() - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ConvertToAnnotationTable

isRemoveOverlay() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImagePlusAlgorithm

isRenderCursor() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

isRenderedOrRendering() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataPreview

isRenderGreyscaleImages() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.BlendImagesAlgorithm

isRenderLabel() - Method in class org.hkijena.jipipe.plugins.pipelinerender.RenderPipelineRunSettings

isRenderOutsideEdges() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

isRenderROIAsOverlay() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageViewerUIROI2DDisplayApplicationSettings

isRenderROIAsVolume() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ImageViewerUIROI3DDisplayApplicationSettings

isRenderShadow() - Method in class org.hkijena.jipipe.plugins.pipelinerender.RenderPipelineRunSettings

isReplaceIfExists() - Method in class org.hkijena.jipipe.plugins.tables.nodes.GenerateColumnAlgorithm

isRequireColocalization() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

isRequireColocalization() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm

isRequireColocalization() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

isRequireColocalization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm

isRequireDirection() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

isRequireGPU() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

isResample() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationPerformanceSettings_Old

Deprecated.

isResample() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTweaksSettings

isResizeLeftSidebar() - Method in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.DynamicSidebarRatio

isRestarting() - Static method in class org.hkijena.jipipe.JIPipe

Returns true if a JIPipe restart is in progress.

isRestoreAnnotations() - Method in class org.hkijena.jipipe.plugins.forms.algorithms.IteratingFormProcessorAlgorithm

isRestoreOriginalAnnotations() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DReferencedAlgorithm

isRestoreOriginalAnnotations() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DSingleAlgorithm

isRestoreOriginalAnnotations() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

isRestoreOriginalAnnotations() - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementMergingAlgorithm

isRestoreTabs() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

isRestoreTabs() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectDefaultsApplicationSettings

isRestrictToROI() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

isReverseSortOrder() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm

isReverseSortOrder() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.SortTableColumnsAlgorithm

isReverseSortOrder() - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.SortTableRowsAlgorithm

isRgbUseRender() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

isRightPanelIsFloating() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

isRightPanelVisible() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

isRotate() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ResliceAlgorithm

isRotate() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Reslicer

isRunnable() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory

isRunnable() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

isRunnable() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

Indicates that the node should carry a workload.

isRunnable() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory

Returns true if nodes of this category can be run in a single run

isRunningOrEnqueued(JIPipeRunnable) - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

Determines if a runnable is enqueued or running

isSaturate() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter

isSaveRGBWithImageJ() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesApplicationSettings

isSaveROI() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEExporterSettings

isSaveToDisk() - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRunSettings

isScheduledForActivation() - Method in interface org.hkijena.jipipe.JIPipePlugin

Returns true if the extension is scheduled to be activated upon the next restart

isScheduledForDeactivation() - Method in interface org.hkijena.jipipe.JIPipePlugin

Returns true if the extension is scheduled to be deactivated upon the next restart

isScrollable() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

isSearchFindExistingNodes() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.NodeSearchSettings

isSearchFindNewNodes() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.NodeSearchSettings

isSelected() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.MainCategoryFilter

isSelected() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopCheckBoxRibbonAction

isSelected() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopToggleButtonRibbonAction

isSeparateChannels() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm

isSeparateNuclei() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.NucleiSegmentation3DAlgorithm

isSet() - Method in class org.hkijena.jipipe.plugins.parameters.library.graph.GraphNodeReferenceParameter

isShowBottomShadow() - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopDropShadowRenderer

isShowCompartmentsRunPanelInOverview() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

isShowConnectionIssueBallon() - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

isShowDescriptions() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel

isShowDescriptions() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.NodeSearchSettings

isShowFilaments() - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.ImageViewerUIFilamentDisplayApplicationSettings

isShowHierarchySelection() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.NodeSearchSettings

isShowHorizontal() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

isShowInProjectOverview() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

isShowInProjectOverview() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartmentOutput

isShowIntroduction() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

isShowLeftShadow() - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopDropShadowRenderer

isShowLimitedParameters() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

isShowLimitedParameters() - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

isShowName() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.GroupHeaderFormData

isShowName() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.ParameterFormData

isShowNotificationsAfterFirstStart() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

isShowParameterSearchBar() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

isShowProjectInfo() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

isShowRightShadow() - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopDropShadowRenderer

isShowROI() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ImageViewerUIROI3DDisplayApplicationSettings

isShowROI() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageViewerUIROI2DDisplayApplicationSettings

isShowRunNotifications() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

isShowRunOnlyIfInactive() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

isShowSideBar() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeTableViewerUIApplicationSettings

isShowSpots() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUISpotsDisplayApplicationSettings

isShowToolbarLabels() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.DockLayoutSettings

isShowToolbarLabels() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

isShowToolInfo() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

isShowTopShadow() - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopDropShadowRenderer

isShowTracks() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUITracksDisplayApplicationSettings

isShowVertical() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

isShuffleLut() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToRGBAlgorithm

isSideBarVisible() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentPanel

isSilent() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

If true, exceptions are discarded

isSilent() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

isSilent() - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRunSettings

isSilent() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeExtensionApplicationSettings

isSilentlyOverride() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ReorderHyperstackSlicesExpressionAlgorithm

isSingle() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Returns true if each slot only has one row

isSkipCache() - Method in class org.hkijena.jipipe.api.data.JIPipeOutputDataSlot

isSkipCenter() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData

isSkipCenter() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData

isSkipCenter() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.RectangleImageJ2ShapeData

isSkipDataGathering() - Method in class org.hkijena.jipipe.api.data.JIPipeInputDataSlot

isSkipEmpty() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator.GeneratedColumn

isSkipEmptyTarget() - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm

isSkipEmptyTarget() - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementMergingAlgorithm

isSkipExisting() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.CopyPath

isSkipExport() - Method in class org.hkijena.jipipe.api.data.JIPipeOutputDataSlot

isSkipGC() - Method in class org.hkijena.jipipe.api.data.JIPipeOutputDataSlot

isSkipIncompleteDataSets() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

isSkipIncompleteDataSets() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

isSkipInvalid() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.CopyPath

isSkipInvalidInputs() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.OutlineRoiConcaveHullMoreiraSantosAlgorithm

isSkipped() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

Used internally to mark an algorithm as (not) executed without triggering isFunctionallyEquals() Affects JIPipeGraph's getDeactivatedNodes This is not serialized, but copied

isSlotLabelIsCustom() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

isSlotsInputsEditable() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

isSlotsOutputsEditable() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

isSmooth() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm

isSmooth() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm

isSortedStackIds() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm

isSortFilesNumerically() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

isSourceHidden(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Gets source visibility

isSpearmanRankCorrelation() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

isSplit() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.DefineRectangularRoiAlgorithm

Deprecated.

isSplit() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.ReferencedDefineRectangularRoiAlgorithm

Deprecated.

isSplitAfterwards() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiCalculatorAlgorithm

isSplitAtJunctions() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

isSplitBySlotName() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToFilesByMetadataExporterRun.Settings

isSplitBySlotName() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportData

isSplitBySlotName() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter

isSplitByTrack() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

isSplitByTrack() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXResultAnalysisAlgorithm

isSplitC() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEExporterSettings

isSplitChannels() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

isSplitChannels() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

isSplitChannels() - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

isSplitFocalPlanes() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

isSplitFocalPlanes() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

isSplitFocalPlanes() - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

isSplitIntoConnectedComponents() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

isSplitSlices() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

isSplitT() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEExporterSettings

isSplitTimePoints() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

isSplitTimePoints() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

isSplitTimePoints() - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

isSplitZ() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEExporterSettings

isStartsAtMean() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

isStatic() - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeArtifactQueryParameter

isStatusValid() - Method in class org.hkijena.jipipe.plugins.batchassistant.DataBatchStatusData

isStitchTiles() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

isStitchTiles() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

isStitchTiles() - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

isStoreIntermediateResults() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.actions.JIPipeDesktopRunAndShowResultsAction

isStoreIntermediateResults() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.actions.JIPipeDesktopUpdateCacheAction

isStoreIntermediateResults() - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRunSettings

isStoreToCache() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

isStoreToCache() - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRunSettings

isStoreToDisk() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

isStoreToDisk() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

isStretchHistogram() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.ImageJContrastEnhancerAlgorithm

isStretchHistogram() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo16BitAutoContrastAlgorithm

isStretchHistogram() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo8BitAutoContrastAlgorithm

isStrict() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm

isStringColumn() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo.OutputTableColumnInfo

isStringColumn(String) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

isStringColumn(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

isSubtract() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm

isSuccess() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableLogEntry

isSuccessful() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextTableModel

isSupported() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

isSupportsLinux() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

isSupportsMacOS() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

isSupportsWindows() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

isSuppressLogs() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

isSuppressLogs() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

isSuppressLogs() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

isSuppressLogs() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

isSuppressLogs() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

isSuppressLogs() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

isSuppressLogs() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

isSuppressLogs() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

isSuppressLogs() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

isSuppressLogs() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

isSuppressLogs() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

isSuppressLogs() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

isSuppressLogs() - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.IteratingPythonScriptAlgorithm

isSuppressLogs() - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.MergingPythonScriptAlgorithm

isSuppressLogs() - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.PythonScriptAlgorithm

isSwapDimensions() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

isSwapDimensions() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

isSwapDimensions() - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

isSwitchPanningDirection() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

isSwitchToProjectInfoOnUnknownProject() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

isThinLines() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm

isTile() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationPerformanceSettings_Old

Deprecated.

isToggleInstallationStatus() - Method in class org.hkijena.jipipe.desktop.app.plugins.artifactsmanager.JIPipeDesktopArtifactManagerUI.ArtifactEntry

isToggleInstallationStatus() - Method in class org.hkijena.jipipe.desktop.app.plugins.pluginsmanager.JIPipeDesktopPluginManagerUI.PluginEntry

isTopBottomTabPlacement(int) - Static method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPane

isTrainSizeModel() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

isTrainSizeModel() - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

isTrainSizeModel() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

isTrainSizeModel() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

isTrainSizeModel() - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

isTrainSizeModel() - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

isTriviallyConvertible(Class<? extends JIPipeData>, Class<? extends JIPipeData>) - Static method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Returns true if the input data type can be trivially converted into the output data type.

isTrySolveJunctions() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

isUIImportantLabelEnabled() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

If true, the JIPipeDesktopParameterFormPanel will render an "important" label if the parameter is marked as important.

isUIImportantLabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListDesktopParameterEditorUI

isUIImportantLabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetDesktopParameterEditorUI

isUIImportantLabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.collections.DesktopParameterCollectionListEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollectionDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContentsDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

If true, the JIPipeDesktopParameterFormPanel will display a label with the parameter name next to this UI.

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.expressions.ui.JIPipeExpressionDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.WekaClassifierDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OMEAccessorDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.nodetemplate.JIPipeNodeTemplateDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicEnumDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.EnumDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2DDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.auth.PasswordDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.collections.DesktopParameterCollectionListEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.colors.ColorDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.editors.JIPipeParameterCollectionVisibilitiesDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.filesystem.FileDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.filesystem.FilePathDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.graph.GraphNodeReferenceParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.images.ImageDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeAuthorMetadataDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeDesktopArtifactQueryParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeDesktopExternalEnvironmentParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeParameterCollectionDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLTextDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtractionDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.NumberDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRangeDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.StringDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.StringOrDoubleDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.VectorDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.quantities.QuantityDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.IconRefDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExporterRefDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRefDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImporterRefDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRefDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRefDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeNodeInfoRefDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeParameterTypeInfoRefDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.AnchorDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMarginEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.InnerMarginEditorUIDesktop

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.MarginDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.RectangleDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.scripts.LargeScriptDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.DesktopParameterTableEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.plots.parameters.UIPlotDataSeriesColumnEnumDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnGeneratorDesktopParameterEditorUI

isUILabelEnabled() - Method in class org.hkijena.jipipe.plugins.tables.parameters.ResultsTableDataDesktopParameterEditorUI

isUiLocked() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

isUniformStrokeColor() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer

isUniqueStackIds() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm

isUnsupported() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

isUpdateWithHexCode() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopColorChooserButton

isUseBioFormats() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesApplicationSettings

isUseCustomColorMap() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

isUseExpression() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRange

isUseNaturalSortOrder() - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.SortTableColumnsAlgorithm

isUseNaturalSortOrder() - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.SortTableRowsAlgorithm

isUseNeighbors() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature2DSettings

isUseNeighbors() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature3DSettings

isUseOverlay() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

isUserCanDisconnect() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphEdge

isUseResidualConnections() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

isUseResidualConnections() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2TrainingTweaksSettings

isUseResidualConnections() - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeTrainingTweaksSettings

isUserModifiable() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

Additional control variable to make a slot not removable/editable.

isUserRemovable() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.DoubleArrayTableColumnData

isUserRemovable() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.FloatArrayTableColumnData

isUserRemovable() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RelabeledTableColumnData

isUserRemovable() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RowIndexTableColumnData

isUserRemovable() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.StringArrayTableColumnData

isUserRemovable() - Method in interface org.hkijena.jipipe.plugins.tables.datatypes.TableColumnData

Returns if users can remove this source

isUserRemovable() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ZeroTableColumnData

isUserRemovable() - Method in class org.hkijena.jipipe.plugins.tables.TableColumnDataReference

isUseScratchDirectory() - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.TemporaryFolderDataSource

isUseSGD() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTrainingTweaksSettings

isUseStackHistogram() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm

isUseStyleVector() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

isUseStyleVector() - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2TrainingTweaksSettings

isUseStyleVector() - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeTrainingTweaksSettings

isUseThickness() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.RemoveBorderFilaments

isUseWekaNativeTiling() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling2DSettings

isUsingCustomCopy() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.FormData

Determines whether this form data uses a custom copy method for the "Apply to ..." function If false, duplicate() is used If true, customCopy(src) is used

isUsingCustomCopy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.MaskDrawerFormData

isUsingCustomCopy() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.ROIDrawerFormData

isUsingCustomReset() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.FormData

Determines whether this form data uses a custom reset method If false, a new copy of the original data is created If true, customReset() is called

isUsingCustomReset() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.MaskDrawerFormData

isUsingCustomReset() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.ROIDrawerFormData

isValid() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder

isValid() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReport

isValidateJson() - Method in class org.hkijena.jipipe.plugins.strings.datasources.ImportJsonAlgorithm

isValidateNodeTypes() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeExtensionApplicationSettings

isValidateOnSave() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

isValidateXml() - Method in class org.hkijena.jipipe.plugins.strings.datasources.ImportXMLAlgorithm

isValidDouble(String) - Static method in class org.hkijena.jipipe.utils.StringUtils

isValidExtensionId(String) - Static method in class org.hkijena.jipipe.JIPipe

Returns if the ID is a valid extension ID Must have following structure: [group]:[artifact] [group] should be lower-case and be a valid Maven group ID [artifact] should be lower-case and a valid Maven artifact ID

isValidInteger(String) - Static method in class org.hkijena.jipipe.utils.StringUtils

isValidName(String) - Static method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

Returns true if the provided string is a valid slot name

isValidPosition(ImageProcessor, int, int) - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.SourceWrapMode

isValidVariableName(String) - Static method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameter

Returns true if a string is a valid variable name

isValidVariableName(String) - Static method in class org.hkijena.jipipe.utils.scripting.MacroUtils

Returns true if the variable name is valid

isValidVersion(String) - Static method in class org.hkijena.jipipe.utils.StringUtils

isValuesAreJson() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column

isValuesAreJson() - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column

isVirtual() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

isVisible(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionVisibilities

Returns if the parameter is visible

isVisible() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Action

isVisible() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

isVisible() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Task

isVisible() - Method in class org.hkijena.jipipe.utils.scripting.MacroFlag

isVisible() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

isVisible() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.PanelSideVisibilityChangedEvent

isVisibleIn(UUID) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

isVisibleIn(Roi, ImageSliceIndex, boolean, boolean, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Returns true if the ROI is visible at given slice index

isVisibleInCompartments() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory

isVisibleInCompartments() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory

isVisibleInCompartments() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory

isVisibleInCompartments() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory

isVisibleInCompartments() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory

isVisibleInCompartments() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory

isVisibleInCompartments() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory

isVisibleInCompartments() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory

isVisibleInCompartments() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory

isVisibleInCompartments() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory

isVisibleInCompartments() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory

isVisibleInCompartments() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory

isVisibleInCompartments() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory

If the category should be available in the compartment graph editor

isVisibleInCompartments() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.PinnedDummyNodeTypeCategory

isVisibleInCompartments() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.TemplatesDummyNodeTypeCategory

isVisibleInCompartments() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsNodeTypeCategory

isVisibleInGraph() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopGraphEditorToolBarButtonExtension

Override this method to determine if this button should be available for a graph

isVisibleInPipeline() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory

isVisibleInPipeline() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory

isVisibleInPipeline() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory

isVisibleInPipeline() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory

isVisibleInPipeline() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory

isVisibleInPipeline() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory

isVisibleInPipeline() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory

isVisibleInPipeline() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory

isVisibleInPipeline() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory

isVisibleInPipeline() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory

isVisibleInPipeline() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory

isVisibleInPipeline() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory

isVisibleInPipeline() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory

If the category should be available in the graph compartment editor

isVisibleInPipeline() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.PinnedDummyNodeTypeCategory

isVisibleInPipeline() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.TemplatesDummyNodeTypeCategory

isVisibleInPipeline() - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsNodeTypeCategory

isVtkAvailable() - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesPlugin

isWarnNoAuthors() - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectAuthorsApplicationSettings

isWide() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.FormPanelEntry

isWithCompartmentAndAlgorithm() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

isWithDocumentation() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

isWithEdges() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

isWithEdges() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

isWithEdges() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm

isWithEdges() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm

isWithEdges() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm

isWithEdges() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm

isWithExternalDocumentation() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

isWithGrid() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopImageFrameComponent

isWithLegend() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

isWithNonMaximaSuppression() - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

isWithParents() - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.CreateDirectory

isWithRefresh() - Method in class org.hkijena.jipipe.desktop.app.parameterreference.JIPipeDesktopGraphNodeParameterReferenceGroupCollectionEditorUI

isWithSpinner() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

isWithVertices() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

isWithVertices() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

isWithVertices() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm

isWithVertices() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm

isWithVertices() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm

isWithVertices() - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm

isxPhoto() - Method in enum org.hkijena.jipipe.plugins.opencv.nodes.InpaintingAlgorithm.Method

IterableImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.data.input

Handling of Iterable, assumed to be ImgPlus It is assumed that these refer to images (conversion to ImageJ2DatasetData)

IterableImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.data.input.IterableImageJ2ModuleInput

IteratingFormProcessorAlgorithm - Class in org.hkijena.jipipe.plugins.forms.algorithms

IteratingFormProcessorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.IteratingFormProcessorAlgorithm

IteratingFormProcessorAlgorithm(IteratingFormProcessorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.IteratingFormProcessorAlgorithm

IteratingJythonScriptAlgorithm - Class in org.hkijena.jipipe.plugins.python.algorithms.jython

An algorithm that allows to run Python code

IteratingJythonScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.python.algorithms.jython.IteratingJythonScriptAlgorithm

Creates a new instance

IteratingJythonScriptAlgorithm(IteratingJythonScriptAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.python.algorithms.jython.IteratingJythonScriptAlgorithm

Creates a copy

IteratingPythonScriptAlgorithm - Class in org.hkijena.jipipe.plugins.python.algorithms.python

An algorithm that allows to run Python code

IteratingPythonScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.python.algorithms.python.IteratingPythonScriptAlgorithm

Creates a new instance

IteratingPythonScriptAlgorithm(IteratingPythonScriptAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.python.algorithms.python.IteratingPythonScriptAlgorithm

Creates a copy

IteratingRScriptAlgorithm - Class in org.hkijena.jipipe.plugins.r.algorithms

IteratingRScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.r.algorithms.IteratingRScriptAlgorithm

IteratingRScriptAlgorithm(IteratingRScriptAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.r.algorithms.IteratingRScriptAlgorithm

IterationModeEnumInfo() - Constructor for class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm.IterationModeEnumInfo

IterationStepGenerationSettings() - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm.IterationStepGenerationSettings

IterationStepGenerationSettings(JIPipeParameterlessSimpleIteratingAlgorithm.IterationStepGenerationSettings) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm.IterationStepGenerationSettings

IterationStepSlicer - Class in org.hkijena.jipipe.plugins.utils.algorithms

IterationStepSlicer(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.IterationStepSlicer

IterationStepSlicer(IterationStepSlicer) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.IterationStepSlicer

IterativeThreshold3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.segmentation

IterativeThreshold3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

IterativeThreshold3DAlgorithm(IterativeThreshold3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

IterativeThreshold3DAlgorithm.CriteriaMethod - Enum in org.hkijena.jipipe.plugins.ij3d.nodes.segmentation

IterativeThreshold3DAlgorithm.SegmentResultsMethod - Enum in org.hkijena.jipipe.plugins.ij3d.nodes.segmentation

IterativeThreshold3DAlgorithm.ThresholdMethod - Enum in org.hkijena.jipipe.plugins.ij3d.nodes.segmentation

IterativeThresholdByROIStatistics2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative

IterativeThresholdByROIStatistics2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

IterativeThresholdByROIStatistics2DAlgorithm(IterativeThresholdByROIStatistics2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

IterativeThresholdByROIStatistics2DAlgorithm.FilteringParameters - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative

IterativeThresholdByROIStatistics2DAlgorithm.ScoreParameters - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative

IterativeThresholdByROIStatistics2DAlgorithm.ThresholdingResult - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative

iterator() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

iterator() - Method in class org.hkijena.jipipe.plugins.ilastik.utils.GridCoordinates

iterator() - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

J

JavaExtensionValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts

JavaExtensionValidationReportContext(JIPipeDependency) - Constructor for class org.hkijena.jipipe.api.validation.contexts.JavaExtensionValidationReportContext

JavaExtensionValidationReportContext(JIPipeValidationReportContext, JIPipeDependency) - Constructor for class org.hkijena.jipipe.api.validation.contexts.JavaExtensionValidationReportContext

JavaScriptFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.scripts

JavaScriptFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.scripts.JavaScriptFunction

JFreeChartPlotColumn - Annotation Type in org.hkijena.jipipe.plugins.plots.datatypes

Defines that a JFreeChartPlotData has

JFreeChartPlotData - Class in org.hkijena.jipipe.plugins.plots.datatypes

Contains all necessary data to generate a plot

JFreeChartPlotData() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

Creates a new empty instance

JFreeChartPlotData(JFreeChartPlotData) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

Creates a copy of the provided data

JFreeChartPlotData.Serializer - Class in org.hkijena.jipipe.plugins.plots.datatypes

Serializes the metadata of JFreeChartPlotData

JFreeChartPlotDataSeries - Class in org.hkijena.jipipe.plugins.plots.datatypes

A data series (table) that is rendered as plot series

JFreeChartPlotDataSeries() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotDataSeries

Creates a new instance with a null table

JFreeChartPlotDataSeries(ResultsTable) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotDataSeries

Creates a new instance from a ResultsTable

JFreeChartPlotDataSeries(JFreeChartPlotDataSeries) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotDataSeries

Creates a copy

JFreeChartPlotDataSeries.Deserializer - Class in org.hkijena.jipipe.plugins.plots.datatypes

JFreeChartPlotDataSeries.Serializer - Class in org.hkijena.jipipe.plugins.plots.datatypes

JFreeChartPlotDataViewer - Class in org.hkijena.jipipe.plugins.plots.viewers

JFreeChartPlotDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.plots.viewers.JFreeChartPlotDataViewer

JFreeChartPlotEditor - Class in org.hkijena.jipipe.desktop.app.ploteditor

User interface for displaying and creating plots

JFreeChartPlotEditor(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

JFreeChartPlotMetadata - Annotation Type in org.hkijena.jipipe.plugins.plots.datatypes

Annotates a JFreeChartPlotData with information about plots

JIPipe - Class in org.hkijena.jipipe

A scijava service that discovers JIPipe plugins in the classpath

JIPipe() - Constructor for class org.hkijena.jipipe.JIPipe

JIPipeActionGraphEditorTool - Interface in org.hkijena.jipipe.api.grapheditortool

JIPipeAdaptiveParametersAlgorithm - Interface in org.hkijena.jipipe.api.nodes

An algorithm that has support for adaptive parameters

JIPipeAdaptiveParameterSettings - Class in org.hkijena.jipipe.api.nodes

Settings class that allows users to generate expressions with adaptive parameters

JIPipeAdaptiveParameterSettings() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

JIPipeAdaptiveParameterSettings(JIPipeAdaptiveParameterSettings) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

JIPipeAdaptiveParameterSettings.VariablesInfo - Class in org.hkijena.jipipe.api.nodes

JIPipeAlgorithm - Class in org.hkijena.jipipe.api.nodes

An JIPipeGraphNode that contains a non-empty workload.

JIPipeAlgorithm(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

Initializes a new node type instance and sets a custom slot configuration

JIPipeAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

Initializes a new node type instance

JIPipeAlgorithm(JIPipeAlgorithm) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

Creates a copy

JIPipeAnnotation - Interface in org.hkijena.jipipe.api.annotation

JIPipeAnnotationGraphNode - Class in org.hkijena.jipipe.api.nodes.annotation

A node that is an annotation Nodes of this type are rendered by JIPipeDesktopAnnotationGraphNodeUI instead of JIPipeDesktopGraphNodeUI and have a custom size information

JIPipeAnnotationGraphNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode

JIPipeAnnotationGraphNode(JIPipeAnnotationGraphNode) - Constructor for class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode

JIPipeAnnotationGraphNodeTool<T extends JIPipeAnnotationGraphNode> - Class in org.hkijena.jipipe.api.nodes.annotation

JIPipeAnnotationGraphNodeTool(Class<T>) - Constructor for class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

JIPipeApplicationSettingsRegistry - Class in org.hkijena.jipipe.api.registries

Registry for settings.

JIPipeApplicationSettingsRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeApplicationSettingsRegistry

JIPipeApplicationSettingsRegistry.ChangedEvent - Class in org.hkijena.jipipe.api.registries

JIPipeApplicationSettingsRegistry.ChangedEventEmitter - Class in org.hkijena.jipipe.api.registries

JIPipeApplicationSettingsRegistry.ChangedEventListener - Interface in org.hkijena.jipipe.api.registries

JIPipeApplicationSettingsSheet - Interface in org.hkijena.jipipe.api.settings

A settings sheet used for storing application-wide settings

JIPipeArchiveProjectRun - Class in org.hkijena.jipipe.api.project

JIPipeArchiveProjectRun(JIPipeProject) - Constructor for class org.hkijena.jipipe.api.project.JIPipeArchiveProjectRun

JIPipeArchiveProjectToDirectoryRun - Class in org.hkijena.jipipe.api.project

JIPipeArchiveProjectToDirectoryRun(JIPipeProject, Path) - Constructor for class org.hkijena.jipipe.api.project.JIPipeArchiveProjectToDirectoryRun

JIPipeArchiveProjectToZIPRun - Class in org.hkijena.jipipe.api.project

JIPipeArchiveProjectToZIPRun(JIPipeProject, Path) - Constructor for class org.hkijena.jipipe.api.project.JIPipeArchiveProjectToZIPRun

JIPipeArtifact - Class in org.hkijena.jipipe.api.artifacts

JIPipeArtifact() - Constructor for class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

JIPipeArtifact(JIPipeArtifact) - Constructor for class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

JIPipeArtifact(String) - Constructor for class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

JIPipeArtifactAccelerationPreference - Enum in org.hkijena.jipipe.plugins.artifacts

JIPipeArtifactApplicationSettings - Class in org.hkijena.jipipe.plugins.artifacts

JIPipeArtifactApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

JIPipeArtifactEnvironment - Class in org.hkijena.jipipe.api.environments

An environment that can be filled with an artifact

JIPipeArtifactEnvironment() - Constructor for class org.hkijena.jipipe.api.environments.JIPipeArtifactEnvironment

JIPipeArtifactEnvironment(JIPipeArtifactEnvironment) - Constructor for class org.hkijena.jipipe.api.environments.JIPipeArtifactEnvironment

JIPipeArtifactQueryParameter - Class in org.hkijena.jipipe.plugins.parameters.library.jipipe

Parameter that allows the user to select or query an artifact

JIPipeArtifactQueryParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeArtifactQueryParameter

JIPipeArtifactQueryParameter(String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeArtifactQueryParameter

JIPipeArtifactQueryParameter(JIPipeArtifactQueryParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeArtifactQueryParameter

JIPipeArtifactQueryParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.parameters.library.jipipe

JIPipeArtifactRepositoryApplyInstallUninstallRun - Class in org.hkijena.jipipe.api.artifacts

JIPipeArtifactRepositoryApplyInstallUninstallRun(List<JIPipeRemoteArtifact>, List<JIPipeLocalArtifact>) - Constructor for class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryApplyInstallUninstallRun

JIPipeArtifactRepositoryInstallArtifactRun - Class in org.hkijena.jipipe.api.artifacts

JIPipeArtifactRepositoryInstallArtifactRun(JIPipeRemoteArtifact) - Constructor for class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryInstallArtifactRun

JIPipeArtifactRepositoryInstallManuallyRun - Class in org.hkijena.jipipe.api.artifacts

JIPipeArtifactRepositoryInstallManuallyRun(Path, JIPipeArtifact) - Constructor for class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryInstallManuallyRun

JIPipeArtifactRepositoryOperationRun - Class in org.hkijena.jipipe.api.artifacts

JIPipeArtifactRepositoryOperationRun() - Constructor for class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryOperationRun

JIPipeArtifactRepositoryOperationRun.RepositoryLockType - Enum in org.hkijena.jipipe.api.artifacts

JIPipeArtifactRepositoryReference - Class in org.hkijena.jipipe.api.artifacts

JIPipeArtifactRepositoryReference() - Constructor for class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryReference

JIPipeArtifactRepositoryReference(JIPipeArtifactRepositoryReference) - Constructor for class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryReference

JIPipeArtifactRepositoryReference(String, String, JIPipeArtifactRepositoryType) - Constructor for class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryReference

JIPipeArtifactRepositoryReferenceList - Class in org.hkijena.jipipe.api.artifacts

JIPipeArtifactRepositoryReferenceList() - Constructor for class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryReferenceList

JIPipeArtifactRepositoryReferenceList(JIPipeArtifactRepositoryReferenceList) - Constructor for class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryReferenceList

JIPipeArtifactRepositoryType - Enum in org.hkijena.jipipe.api.artifacts

JIPipeArtifactRepositoryUninstallArtifactRun - Class in org.hkijena.jipipe.api.artifacts

JIPipeArtifactRepositoryUninstallArtifactRun(JIPipeLocalArtifact) - Constructor for class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryUninstallArtifactRun

JIPipeArtifactRepositoryUpdateCachedArtifactsRun - Class in org.hkijena.jipipe.api.artifacts

JIPipeArtifactRepositoryUpdateCachedArtifactsRun() - Constructor for class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryUpdateCachedArtifactsRun

JIPipeArtifactsRegistry - Class in org.hkijena.jipipe.api.registries

JIPipeArtifactsRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry

JIPipeArtifactsRegistry.UpdatedEvent - Class in org.hkijena.jipipe.api.registries

JIPipeArtifactsRegistry.UpdatedEventEmitter - Class in org.hkijena.jipipe.api.registries

JIPipeArtifactsRegistry.UpdatedEventListener - Interface in org.hkijena.jipipe.api.registries

JIPipeAuthorMetadata - Class in org.hkijena.jipipe.api

Models an author with affiliations

JIPipeAuthorMetadata() - Constructor for class org.hkijena.jipipe.api.JIPipeAuthorMetadata

Creates a new instance

JIPipeAuthorMetadata(String, String, String, StringList, String, String, String, boolean, boolean) - Constructor for class org.hkijena.jipipe.api.JIPipeAuthorMetadata

Initializes the instance

JIPipeAuthorMetadata(String, String, String, StringList, String, String, boolean, boolean) - Constructor for class org.hkijena.jipipe.api.JIPipeAuthorMetadata

Initializes the instance

JIPipeAuthorMetadata(JIPipeAuthorMetadata) - Constructor for class org.hkijena.jipipe.api.JIPipeAuthorMetadata

JIPipeAuthorMetadata.List - Class in org.hkijena.jipipe.api

JIPipeAuthorMetadataDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.jipipe

JIPipeAuthorMetadataDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeAuthorMetadataDesktopParameterEditorUI

JIPipeBackupApplicationSettings - Class in org.hkijena.jipipe.plugins.settings

JIPipeBackupApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeBackupApplicationSettings

JIPipeCache - Interface in org.hkijena.jipipe.api.cache

A class that implements a data cache

JIPipeCache.ClearedEvent - Class in org.hkijena.jipipe.api.cache

JIPipeCache.ClearedEventEmitter - Class in org.hkijena.jipipe.api.cache

JIPipeCache.ClearedEventListener - Interface in org.hkijena.jipipe.api.cache

JIPipeCache.ModifiedEvent - Class in org.hkijena.jipipe.api.cache

JIPipeCache.ModifiedEventEmitter - Class in org.hkijena.jipipe.api.cache

JIPipeCache.ModifiedEventListener - Interface in org.hkijena.jipipe.api.cache

JIPipeCache.StoredEvent - Class in org.hkijena.jipipe.api.cache

JIPipeCache.StoredEventEmitter - Class in org.hkijena.jipipe.api.cache

JIPipeCache.StoredEventListener - Interface in org.hkijena.jipipe.api.cache

JIPipeCacheClearAllRun - Class in org.hkijena.jipipe.api.cache

JIPipeCacheClearAllRun(JIPipeCache) - Constructor for class org.hkijena.jipipe.api.cache.JIPipeCacheClearAllRun

JIPipeCacheClearOutdatedRun - Class in org.hkijena.jipipe.api.cache

JIPipeCacheClearOutdatedRun(JIPipeCache) - Constructor for class org.hkijena.jipipe.api.cache.JIPipeCacheClearOutdatedRun

JIPipeCachedDataSlotDataSource - Class in org.hkijena.jipipe.api.data.sources

JIPipeCachedDataSlotDataSource(JIPipeDataTable, int, UUID, String) - Constructor for class org.hkijena.jipipe.api.data.sources.JIPipeCachedDataSlotDataSource

JIPipeCachedDataSlotDataSource(JIPipeDataTable, int, String, UUID, String) - Constructor for class org.hkijena.jipipe.api.data.sources.JIPipeCachedDataSlotDataSource

JIPipeCLIHelp - Class in org.hkijena.jipipe.cli

JIPipeCLIHelp() - Constructor for class org.hkijena.jipipe.cli.JIPipeCLIHelp

JIPipeCLIMain - Class in org.hkijena.jipipe.cli

JIPipeCLIMain() - Constructor for class org.hkijena.jipipe.cli.JIPipeCLIMain

JIPipeCLIPipelineRender - Class in org.hkijena.jipipe.cli

JIPipeCLIPipelineRender() - Constructor for class org.hkijena.jipipe.cli.JIPipeCLIPipelineRender

JIPipeCLIPipelineRun - Class in org.hkijena.jipipe.cli

JIPipeCLIPipelineRun() - Constructor for class org.hkijena.jipipe.cli.JIPipeCLIPipelineRun

JIPipeColumMatching - Enum in org.hkijena.jipipe.api.nodes

Strategies that determine how to detect the columns that should be used for matching

JIPipeColumnMatchingEnumInfo - Class in org.hkijena.jipipe.api.nodes

JIPipeColumnMatchingEnumInfo() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeColumnMatchingEnumInfo

JIPipeCommentNode - Class in org.hkijena.jipipe.plugins.core.nodes

JIPipeCommentNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.core.nodes.JIPipeCommentNode

JIPipeCommentNode(JIPipeCommentNode) - Constructor for class org.hkijena.jipipe.plugins.core.nodes.JIPipeCommentNode

JIPipeCompartmentOutputData - Class in org.hkijena.jipipe.api.compartments.datatypes

Represents an JIPipeProjectCompartmentOutput in the compartment graph.

JIPipeCompartmentOutputData() - Constructor for class org.hkijena.jipipe.api.compartments.datatypes.JIPipeCompartmentOutputData

JIPipeCompartmentsPlugin - Class in org.hkijena.jipipe.api.compartments

Extension that provides compartment management functionality

JIPipeCompartmentsPlugin() - Constructor for class org.hkijena.jipipe.api.compartments.JIPipeCompartmentsPlugin

JIPipeConnectGraphEditorTool - Class in org.hkijena.jipipe.api.grapheditortool

JIPipeConnectGraphEditorTool() - Constructor for class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

JIPipeContextAction - Annotation Type in org.hkijena.jipipe.api.parameters

An additional action (usually UI action) that is attached to the JIPipeDesktopParameterFormPanel.

JIPipeCreateCompartmentNodesFromDraggedDataDragAndDropBehavior - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.dragdrop

Installs Drag and Drop features that create filesystem nodes

JIPipeCreateCompartmentNodesFromDraggedDataDragAndDropBehavior() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.dragdrop.JIPipeCreateCompartmentNodesFromDraggedDataDragAndDropBehavior

JIPipeCreatePipelineNodesFromDraggedDataDragAndDropBehavior - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.dragdrop

Installs Drag and Drop features that create filesystem nodes

JIPipeCreatePipelineNodesFromDraggedDataDragAndDropBehavior() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.dragdrop.JIPipeCreatePipelineNodesFromDraggedDataDragAndDropBehavior

JIPipeCropViewGraphEditorTool - Class in org.hkijena.jipipe.api.grapheditortool

JIPipeCropViewGraphEditorTool() - Constructor for class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool

JIPipeCustomAnnotationMatchingExpressionVariables - Class in org.hkijena.jipipe.api.nodes

JIPipeCustomAnnotationMatchingExpressionVariables() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeCustomAnnotationMatchingExpressionVariables

JIPipeCustomExpressionVariablesParameter - Class in org.hkijena.jipipe.plugins.expressions.custom

A parameter collection that allows the creation of custom expression variables Please note that the JIPipeParameter annotation should have JIPipeParameterSerializationMode set to 'NestedCollection'.

JIPipeCustomExpressionVariablesParameter() - Constructor for class org.hkijena.jipipe.plugins.expressions.custom.JIPipeCustomExpressionVariablesParameter

JIPipeCustomExpressionVariablesParameter(AbstractJIPipeParameterCollection) - Constructor for class org.hkijena.jipipe.plugins.expressions.custom.JIPipeCustomExpressionVariablesParameter

JIPipeCustomExpressionVariablesParameter(JIPipeCustomExpressionVariablesParameter) - Constructor for class org.hkijena.jipipe.plugins.expressions.custom.JIPipeCustomExpressionVariablesParameter

JIPipeCustomExpressionVariablesParameter(JIPipeCustomExpressionVariablesParameter, AbstractJIPipeParameterCollection) - Constructor for class org.hkijena.jipipe.plugins.expressions.custom.JIPipeCustomExpressionVariablesParameter

JIPipeCustomExpressionVariablesParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.expressions.custom

JIPipeCustomExpressionVariablesParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.expressions.custom.JIPipeCustomExpressionVariablesParameterVariablesInfo

JIPipeCustomMenuRegistry - Class in org.hkijena.jipipe.desktop.api.registries

Registry for menu extensions

JIPipeCustomMenuRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.desktop.api.registries.JIPipeCustomMenuRegistry

JIPipeCustomParameterCollection - Interface in org.hkijena.jipipe.api.parameters

If a class inherits from this interface, reflection-based parameter discovery is replaced by the getCustomParameters() method result.

JIPipeCustomTextDescriptionParameter - Interface in org.hkijena.jipipe.api.parameters

Extend parameter types with this interface to render custom text descriptions instead of JSON serialized string

JIPipeData - Interface in org.hkijena.jipipe.api.data

Base class for any JIPipe data wrapper class There must be a static function importData(JIPipeReadDataStorage, JIPipeProgressInfo) that imports the data from a row storage folder.

JIPipeDataAnnotation - Class in org.hkijena.jipipe.api.annotation

JIPipeDataAnnotation(String, JIPipeDataItemStore) - Constructor for class org.hkijena.jipipe.api.annotation.JIPipeDataAnnotation

JIPipeDataAnnotation(String, JIPipeData) - Constructor for class org.hkijena.jipipe.api.annotation.JIPipeDataAnnotation

JIPipeDataAnnotationInfo - Class in org.hkijena.jipipe.api.data.serialization

JIPipeDataAnnotationInfo() - Constructor for class org.hkijena.jipipe.api.data.serialization.JIPipeDataAnnotationInfo

JIPipeDataAnnotationInfo(String, Path, String, JIPipeDataTableRowInfo) - Constructor for class org.hkijena.jipipe.api.data.serialization.JIPipeDataAnnotationInfo

JIPipeDataAnnotationMergeMode - Enum in org.hkijena.jipipe.api.annotation

JIPipeDataBatchGenerationResult - Class in org.hkijena.jipipe.api

Result of a iteration step generation run

JIPipeDataBatchGenerationResult() - Constructor for class org.hkijena.jipipe.api.JIPipeDataBatchGenerationResult

JIPipeDataBrowser - Interface in org.hkijena.jipipe.api.data.browser

JIPipeDataBrowser.UpdatedEvent - Class in org.hkijena.jipipe.api.data.browser

Created when the data browser is in some way updated

JIPipeDataBrowser.UpdatedEventEmitter - Class in org.hkijena.jipipe.api.data.browser

JIPipeDataBrowser.UpdatedEventListener - Interface in org.hkijena.jipipe.api.data.browser

JIPipeDataByMetadataExporter - Class in org.hkijena.jipipe.api.annotation

Class that exports data based on metadata

JIPipeDataByMetadataExporter() - Constructor for class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter

JIPipeDataByMetadataExporter(JIPipeDataByMetadataExporter) - Constructor for class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter

JIPipeDataByMetadataExporter.VariablesInfo - Class in org.hkijena.jipipe.api.annotation

JIPipeDataContext - Interface in org.hkijena.jipipe.api.data.context

Context annotation attached to data in a data table.

JIPipeDataConverter - Interface in org.hkijena.jipipe.api.data

Interface that converts between JIPipeData instances

JIPipeDataDirectoryEnvironment - Class in org.hkijena.jipipe.plugins.dataenvironment

An artifact environment that does no have any function workload, but only contains data Points towards a directory

JIPipeDataDirectoryEnvironment() - Constructor for class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironment

JIPipeDataDirectoryEnvironment(JIPipeDataDirectoryEnvironment) - Constructor for class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironment

JIPipeDataDirectoryEnvironment.List - Class in org.hkijena.jipipe.plugins.dataenvironment

JIPipeDataDirectoryEnvironmentApplicationSettings - Class in org.hkijena.jipipe.plugins.dataenvironment

JIPipeDataDirectoryEnvironmentApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironmentApplicationSettings

JIPipeDataDirectoryEnvironmentProjectSettings - Class in org.hkijena.jipipe.plugins.dataenvironment

JIPipeDataDirectoryEnvironmentProjectSettings() - Constructor for class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironmentProjectSettings

JIPipeDataDisplayWrapperImportOperation - Class in org.hkijena.jipipe.api.data

A JIPipeLegacyDataImportOperation that wraps around a JIPipeDesktopDataDisplayOperation

JIPipeDataDisplayWrapperImportOperation(JIPipeDesktopDataDisplayOperation) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation

JIPipeDataDisplayWrapperImportOperation.ImportDataRun - Class in org.hkijena.jipipe.api.data

JIPipeDataExporterApplicationSettings - Class in org.hkijena.jipipe.plugins.settings

Settings for default data exporters

JIPipeDataExporterApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeDataExporterApplicationSettings

JIPipeDataInfo - Class in org.hkijena.jipipe.api.data

Compound type that contains all metadata of an JIPipeData type

JIPipeDataInfo.Deserializer - Class in org.hkijena.jipipe.api.data

Deserializes a info from a data type ID.

JIPipeDataInfo.KeyDeserializer - Class in org.hkijena.jipipe.api.data

Deserializer for a Map key

JIPipeDataInfo.Serializer - Class in org.hkijena.jipipe.api.data

Serializes a info as data type ID

JIPipeDataInfoRef - Class in org.hkijena.jipipe.plugins.parameters.library.references

Helper to allow easy serialization of JIPipeDataInfo references

JIPipeDataInfoRef(String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRef

Initializes from data ID

JIPipeDataInfoRef(JIPipeDataInfo) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRef

JIPipeDataInfoRef() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRef

New instance

JIPipeDataInfoRef(JIPipeDataInfoRef) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRef

Creates a copy

JIPipeDataInfoRef(Class<? extends JIPipeData>) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRef

JIPipeDataInfoRef.Deserializer - Class in org.hkijena.jipipe.plugins.parameters.library.references

Deserializes the reference from a string

JIPipeDataInfoRef.Serializer - Class in org.hkijena.jipipe.plugins.parameters.library.references

Serializes the reference as ID

JIPipeDataInfoRefDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.references

Parameter for JIPipeDataInfoRef

JIPipeDataInfoRefDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRefDesktopParameterEditorUI

JIPipeDataItemStore - Class in org.hkijena.jipipe.api.data

Manages data and users

JIPipeDataItemStore(JIPipeData) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataItemStore

Create virtual data from data

JIPipeDataParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.parameters.library.references

Settings for JIPipeData parameters

JIPipeDataSlot - Class in org.hkijena.jipipe.api.data

A data slot holds an JIPipeData instance.

JIPipeDataSlot(JIPipeDataSlotInfo, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlot

Creates a new slot

JIPipeDataSlot(JIPipeDataSlot, boolean, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlot

JIPipeDataSlotInfo - Class in org.hkijena.jipipe.api.data

Defines an JIPipeGraphNode data slot.

JIPipeDataSlotInfo() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

JIPipeDataSlotInfo(Class<? extends JIPipeData>, JIPipeSlotType, String, String, String, boolean) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

Deprecated.

inheritedSlot is deprecated and non-functional

JIPipeDataSlotInfo(Class<? extends JIPipeData>, JIPipeSlotType, String, String, String) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

Deprecated.

inheritedSlot is deprecated and non-functional

JIPipeDataSlotInfo(Class<? extends JIPipeData>, JIPipeSlotType, String, String, boolean) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

JIPipeDataSlotInfo(Class<? extends JIPipeData>, JIPipeSlotType, String, String) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

JIPipeDataSlotInfo(Class<? extends JIPipeData>, JIPipeSlotType) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

JIPipeDataSlotInfo(AddJIPipeInputSlot) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

JIPipeDataSlotInfo(AddJIPipeOutputSlot) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

JIPipeDataSlotInfo(JIPipeDataSlotInfo) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

Copies the definition

JIPipeDataSlotInfo.Deserializer - Class in org.hkijena.jipipe.api.data

Deserializes an JIPipeDataSlotInfo

JIPipeDataSlotInfo.Deserializer.Builder - Class in org.hkijena.jipipe.api.data

JIPipeDataSlotInfo.Serializer - Class in org.hkijena.jipipe.api.data

Serializes an JIPipeDataSlotInfo

JIPipeDataSlotRole - Enum in org.hkijena.jipipe.api.data

Assigns a role to the data table attached to the data slot.

JIPipeDataSource - Interface in org.hkijena.jipipe.api.data

An object that points to some source of JIPipeData

JIPipeDataStorage - Interface in org.hkijena.jipipe.api.data.storage

A storage for serialized JIPipeData

JIPipeDataStorageDocumentation - Annotation Type in org.hkijena.jipipe.api.data

Added to JIPipeData classes to explain how the data type stores its data.

JIPipeDataStorageProjectSettings - Class in org.hkijena.jipipe.plugins.settings

JIPipeDataStorageProjectSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeDataStorageProjectSettings

JIPipeDataTable - Class in org.hkijena.jipipe.api.data

JIPipeDataTable() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataTable

JIPipeDataTable(Class<? extends JIPipeData>) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataTable

JIPipeDataTable(JIPipeDataTable, boolean, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataTable

JIPipeDataTableBrowser - Interface in org.hkijena.jipipe.api.data.browser

JIPipeDataTableBrowser.UpdatedEvent - Class in org.hkijena.jipipe.api.data.browser

JIPipeDataTableBrowser.UpdatedEventEmitter - Class in org.hkijena.jipipe.api.data.browser

JIPipeDataTableBrowser.UpdatedEventListener - Interface in org.hkijena.jipipe.api.data.browser

JIPipeDataTableDataSource - Class in org.hkijena.jipipe.api.data.sources

A JIPipeDataSource

JIPipeDataTableDataSource(JIPipeDataTable, int) - Constructor for class org.hkijena.jipipe.api.data.sources.JIPipeDataTableDataSource

JIPipeDataTableDataSource(JIPipeDataTable, int, String) - Constructor for class org.hkijena.jipipe.api.data.sources.JIPipeDataTableDataSource

JIPipeDataTableDataViewer - Class in org.hkijena.jipipe.plugins.core.viewers

JIPipeDataTableDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.core.viewers.JIPipeDataTableDataViewer

JIPipeDataTableInfo - Class in org.hkijena.jipipe.api.data.serialization

Contains all metadata exported from an JIPipeDataTable

JIPipeDataTableInfo() - Constructor for class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

JIPipeDataTableInfo(JIPipeDataTable) - Constructor for class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

Converts the data table info an info instance

JIPipeDataTableRowInfo - Class in org.hkijena.jipipe.api.data.serialization

A row in the table

JIPipeDataTableRowInfo() - Constructor for class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableRowInfo

JIPipeDataTableRowInfo(JIPipeDataTable, int) - Constructor for class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableRowInfo

Creates a new instance from an existing row

JIPipeDataThumbnailsMetadata - Class in org.hkijena.jipipe.api.data

Stores the properties of the available thumbnails

JIPipeDataThumbnailsMetadata() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata

JIPipeDataThumbnailsMetadata.Thumbnail - Class in org.hkijena.jipipe.api.data

JIPipeDataTypeCompendiumUI - Class in org.hkijena.jipipe.desktop.app.documentation

JIPipeDataTypeCompendiumUI() - Constructor for class org.hkijena.jipipe.desktop.app.documentation.JIPipeDataTypeCompendiumUI

JIPipeDatatypeRegistry - Class in org.hkijena.jipipe.api.registries

Contains known JIPipeData types, and associates them to their respective JIPipeDataSlot.

JIPipeDatatypeRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Creates a new instance

JIPipeDatatypeRegistry.DataConverterEdge - Class in org.hkijena.jipipe.api.registries

Edge between JIPipeDataInfo instances that indicate a conversion

JIPipeDedicatedGraphHistoryJournal - Class in org.hkijena.jipipe.api.history

JIPipeDedicatedGraphHistoryJournal(JIPipeGraph) - Constructor for class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal

JIPipeDedicatedGraphHistoryJournal.Snapshot - Class in org.hkijena.jipipe.api.history

Stores all information about the state of a

JIPipeDefaultApplicationSettingsSheetCategory - Enum in org.hkijena.jipipe.api.settings

Pre-defined application setting sheet categories to be used with JIPipeDefaultApplicationsSettingsSheet

JIPipeDefaultApplicationsSettingsSheet - Class in org.hkijena.jipipe.api.settings

Application settings sheet of type AbstractJIPipeParameterCollection, pre-configured to use standardized categories

JIPipeDefaultApplicationsSettingsSheet() - Constructor for class org.hkijena.jipipe.api.settings.JIPipeDefaultApplicationsSettingsSheet

JIPipeDefaultCacheDisplayApplicationSettings - Class in org.hkijena.jipipe.plugins.settings

A dynamic settings sheet that lets users select the default cache display

JIPipeDefaultCacheDisplayApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeDefaultCacheDisplayApplicationSettings

JIPipeDefaultCacheDisplayApplicationSettings(JIPipeDynamicParameterCollection) - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeDefaultCacheDisplayApplicationSettings

JIPipeDefaultGraphEditorTool - Class in org.hkijena.jipipe.api.grapheditortool

JIPipeDefaultGraphEditorTool() - Constructor for class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

JIPipeDefaultJavaPlugin - Class in org.hkijena.jipipe

Default implementation of JIPipeJavaPlugin

JIPipeDefaultJavaPlugin() - Constructor for class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Creates a new instance

JIPipeDefaultMutableSlotConfiguration - Class in org.hkijena.jipipe.api.data

A schema for slots

JIPipeDefaultMutableSlotConfiguration() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Creates a new instance

JIPipeDefaultMutableSlotConfiguration.Builder - Class in org.hkijena.jipipe.api.data

A builder for creating a configuration

JIPipeDefaultNodeRegistrationTask - Class in org.hkijena.jipipe.api.registries

Mutable implementation of JIPipeNodeRegistrationTask

JIPipeDefaultNodeRegistrationTask() - Constructor for class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask

Creates a new task

JIPipeDefaultParameterCollectionContextAction - Class in org.hkijena.jipipe.api.parameters

JIPipeDefaultParameterCollectionContextAction(SetJIPipeDocumentation, URL, Consumer<JIPipeWorkbench>) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterCollectionContextAction

JIPipeDefaultParameterTypeInfo - Class in org.hkijena.jipipe.api.parameters

Standard implementation of JIPipeParameterTypeInfo

JIPipeDefaultParameterTypeInfo(String, Class<?>, Supplier<Object>, Function<Object, Object>, String, String) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterTypeInfo

JIPipeDefaultProjectSettingsSheet - Class in org.hkijena.jipipe.api.settings

Application settings sheet of type AbstractJIPipeParameterCollection, pre-configured to use standardized categories

JIPipeDefaultProjectSettingsSheet() - Constructor for class org.hkijena.jipipe.api.settings.JIPipeDefaultProjectSettingsSheet

JIPipeDefaultProjectSettingsSheetCategory - Enum in org.hkijena.jipipe.api.settings

Pre-defined application setting sheet categories to be used with JIPipeDefaultProjectSettingsSheet

JIPipeDefaultResultImporterApplicationSettings - Class in org.hkijena.jipipe.plugins.settings

A dynamic settings sheet that lets users select the default importer

JIPipeDefaultResultImporterApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeDefaultResultImporterApplicationSettings

JIPipeDefaultResultImporterApplicationSettings(JIPipeDynamicParameterCollection) - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeDefaultResultImporterApplicationSettings

JIPipeDependency - Interface in org.hkijena.jipipe

Encapsulates a dependency such as an extension or JSON extension

JIPipeDesktop - Class in org.hkijena.jipipe.desktop

Utility class for desktop-related JIPipe functions

JIPipeDesktopAccelerationOptionsControl - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopAccelerationOptionsControl(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAccelerationOptionsControl

JIPipeDesktopAddAlgorithmSlotPanel - Class in org.hkijena.jipipe.desktop.commons.components

UI that adds slots to an algorithm

JIPipeDesktopAddAlgorithmSlotPanel(JIPipeGraphNode, JIPipeSlotType, JIPipeHistoryJournal) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddAlgorithmSlotPanel

JIPipeDesktopAddNodePanelEntryListCellRenderer - Class in org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel

Renderer for JIPipeNodeDatabaseEntry (supports only non-existing nodes fully)

JIPipeDesktopAddNodePanelEntryListCellRenderer(JComponent, JIPipeDesktopAddNodesPanel) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodePanelEntryListCellRenderer

Creates a new renderer

JIPipeDesktopAddNodesPanel - Class in org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel

New and improved node tool box

JIPipeDesktopAddNodesPanel(JIPipeDesktopWorkbench, AbstractJIPipeDesktopGraphEditorUI) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel

JIPipeDesktopAddNodesPanel.MainCategoryFilter - Class in org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel

JIPipeDesktopAddNodesPanel.PinnedDummyNodeTypeCategory - Class in org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel

JIPipeDesktopAddNodesPanel.ReloadListRun - Class in org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel

JIPipeDesktopAddNodesPanel.TemplatesDummyNodeTypeCategory - Class in org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel

JIPipeDesktopAddNodeTransferHandler - Class in org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel

JIPipeDesktopAddNodeTransferHandler() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodeTransferHandler

JIPipeDesktopAddParameterDialog - Class in org.hkijena.jipipe.desktop.commons.components

UI that adds slots to an algorithm

JIPipeDesktopAddParameterDialog(JIPipeDesktopWorkbench, JIPipeDynamicParameterCollection) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddParameterDialog

JIPipeDesktopAddParameterDialog.Settings - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopAdvancedFileChooser - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopAdvancedFileChooser() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

JIPipeDesktopAdvancedFileChooser(File) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

JIPipeDesktopAdvancedFileChooser.FileChooserComponent - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopAdvancedFileChooser.FileChooserComponentUI - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI - Class in org.hkijena.jipipe.desktop.app.cache

JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI

JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEvent - Class in org.hkijena.jipipe.desktop.app.cache

JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEventEmitter - Class in org.hkijena.jipipe.desktop.app.cache

JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEventListener - Interface in org.hkijena.jipipe.desktop.app.cache

JIPipeDesktopAlgorithmCacheBrowserUI - Class in org.hkijena.jipipe.desktop.app.cache

UI around an JIPipeGraphRun result

JIPipeDesktopAlgorithmCacheBrowserUI(JIPipeDesktopProjectWorkbench, JIPipeGraphNode, JIPipeDesktopGraphCanvasUI) - Constructor for class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopAlgorithmCacheBrowserUI

JIPipeDesktopAlgorithmCompendiumUI - Class in org.hkijena.jipipe.desktop.app.documentation

A browsable list of algorithms with full documentation

JIPipeDesktopAlgorithmCompendiumUI() - Constructor for class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopAlgorithmCompendiumUI

Creates a new instance

JIPipeDesktopAlgorithmListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.renderers

Renders JIPipeGraphNode

JIPipeDesktopAlgorithmListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopAlgorithmListCellRenderer

Creates a new renderer

JIPipeDesktopAlwaysOnTopToggle - Class in org.hkijena.jipipe.desktop.commons.components.window

JIPipeDesktopAlwaysOnTopToggle(JWindow) - Constructor for class org.hkijena.jipipe.desktop.commons.components.window.JIPipeDesktopAlwaysOnTopToggle

JIPipeDesktopAlwaysOnTopToggle(JFrame) - Constructor for class org.hkijena.jipipe.desktop.commons.components.window.JIPipeDesktopAlwaysOnTopToggle

JIPipeDesktopAlwaysOnTopToggle(JDialog) - Constructor for class org.hkijena.jipipe.desktop.commons.components.window.JIPipeDesktopAlwaysOnTopToggle

JIPipeDesktopAnimatedIcon - Class in org.hkijena.jipipe.desktop.commons.components.icons

JIPipeDesktopAnimatedIcon(Component, ImageIcon, ImageIcon, int, double) - Constructor for class org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopAnimatedIcon

JIPipeDesktopAnnotationGraphNodeUI - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui

JIPipeDesktopAnnotationGraphNodeUI(JIPipeDesktopWorkbench, JIPipeDesktopGraphCanvasUI, JIPipeAnnotationGraphNode) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopAnnotationGraphNodeUI

Creates a new UI

JIPipeDesktopAnnotationTableCellRenderer - Class in org.hkijena.jipipe.desktop.app.resultanalysis.renderers

Renders JIPipeAnnotation

JIPipeDesktopAnnotationTableCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopAnnotationTableCellRenderer

Creates a new renderer

JIPipeDesktopApplicationSettingsUI - Class in org.hkijena.jipipe.desktop.app.settings

UI for JIPipeApplicationSettingsRegistry

JIPipeDesktopApplicationSettingsUI(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopApplicationSettingsUI

Creates a new instance

JIPipeDesktopApplyPluginManagerRun - Class in org.hkijena.jipipe.desktop.app.plugins.artifactsmanager

JIPipeDesktopApplyPluginManagerRun(Set<JIPipePlugin>, Set<JIPipePlugin>, Set<JIPipeImageJUpdateSiteDependency>) - Constructor for class org.hkijena.jipipe.desktop.app.plugins.artifactsmanager.JIPipeDesktopApplyPluginManagerRun

JIPipeDesktopArrowLessScrollBarUI - Class in org.hkijena.jipipe.desktop.commons.theme

JIPipeDesktopArrowLessScrollBarUI() - Constructor for class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopArrowLessScrollBarUI

JIPipeDesktopArtifactManagerUI - Class in org.hkijena.jipipe.desktop.app.plugins.artifactsmanager

JIPipeDesktopArtifactManagerUI(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.plugins.artifactsmanager.JIPipeDesktopArtifactManagerUI

JIPipeDesktopArtifactManagerUI.ArtifactEntry - Class in org.hkijena.jipipe.desktop.app.plugins.artifactsmanager

JIPipeDesktopArtifactManagerUI.ArtifactEntryListCellRenderer - Class in org.hkijena.jipipe.desktop.app.plugins.artifactsmanager

JIPipeDesktopArtifactQueryParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.jipipe

JIPipeDesktopArtifactQueryParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeDesktopArtifactQueryParameterEditorUI

JIPipeDesktopArtifactQueryParameterEditorUI.ArtifactEnumItemInfo - Class in org.hkijena.jipipe.plugins.parameters.library.jipipe

JIPipeDesktopArtifactsOptionsControl - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopArtifactsOptionsControl(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopArtifactsOptionsControl

JIPipeDesktopAsyncResultDataSlotPreview - Class in org.hkijena.jipipe.desktop.app.resultanalysis

A JIPipeDesktopResultDataSlotPreview that uses a SwingWorker to load previews in a separate thread.

JIPipeDesktopAsyncResultDataSlotPreview(JIPipeDesktopProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableRowInfo, JIPipeDataAnnotationInfo) - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopAsyncResultDataSlotPreview

Creates a new renderer

JIPipeDesktopAuthorProfileButton - Class in org.hkijena.jipipe.desktop.app.components

JIPipeDesktopAuthorProfileButton(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.components.JIPipeDesktopAuthorProfileButton

JIPipeDesktopBackupManagerPanel - Class in org.hkijena.jipipe.desktop.app.backups

JIPipeDesktopBackupManagerPanel(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.backups.JIPipeDesktopBackupManagerPanel

JIPipeDesktopBackupManagerTreeCellRenderer - Class in org.hkijena.jipipe.desktop.app.backups

Renders the tree in JIPipeDesktopResultAlgorithmTree

JIPipeDesktopBackupManagerTreeCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.backups.JIPipeDesktopBackupManagerTreeCellRenderer

Creates new renderer

JIPipeDesktopBookmarkedNodeListCellRenderer - Class in org.hkijena.jipipe.desktop.app.bookmarks

Renderer for JIPipeGraphNode

JIPipeDesktopBookmarkedNodeListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.bookmarks.JIPipeDesktopBookmarkedNodeListCellRenderer

Creates a new renderer

JIPipeDesktopBookmarkListPanel - Class in org.hkijena.jipipe.desktop.app.bookmarks

JIPipeDesktopBookmarkListPanel(JIPipeDesktopWorkbench, JIPipeGraph, AbstractJIPipeDesktopGraphEditorUI, Set<JIPipeGraphNode>) - Constructor for class org.hkijena.jipipe.desktop.app.bookmarks.JIPipeDesktopBookmarkListPanel

JIPipeDesktopCacheBrowserUI - Class in org.hkijena.jipipe.desktop.app.cache

UI around an JIPipeGraphRun result

JIPipeDesktopCacheBrowserUI(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCacheBrowserUI

JIPipeDesktopCachedDataDisplayCacheControl - Class in org.hkijena.jipipe.desktop.app.cache

Interface that allows users to control refresh to cache and update thew current item within directly within the viewed data

JIPipeDesktopCachedDataDisplayCacheControl(JIPipeDesktopProjectWorkbench, JToolBar, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataDisplayCacheControl

JIPipeDesktopCachedDataPreview - Class in org.hkijena.jipipe.desktop.app.cache

A component that acts as table cell (or other component) that generates a preview of a cached JIPipeData Preview generation is put into its own thread.

JIPipeDesktopCachedDataPreview(Component, JIPipeDataItemStore, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataPreview

Creates a new instance

JIPipeDesktopCachedDataPreview(Component, Store<JIPipeDataItemStore>, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataPreview

Creates a new instance

JIPipeDesktopCachedDataViewerAnnotationInfoPanel - Class in org.hkijena.jipipe.desktop.app.cache

JIPipeDesktopCachedDataViewerAnnotationInfoPanel(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataViewerAnnotationInfoPanel

JIPipeDesktopCachedDataViewerAnnotationInfoPanel.Renderer - Class in org.hkijena.jipipe.desktop.app.cache

JIPipeDesktopCachedOutputDataSlotListCellRenderer - Class in org.hkijena.jipipe.desktop.app.cache.renderers

Renders a JIPipeDataSlot

JIPipeDesktopCachedOutputDataSlotListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.cache.renderers.JIPipeDesktopCachedOutputDataSlotListCellRenderer

Creates a new renderer

JIPipeDesktopCacheManagerUI - Class in org.hkijena.jipipe.desktop.app.cache

UI that monitors the queue

JIPipeDesktopCacheManagerUI(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCacheManagerUI

JIPipeDesktopCacheStateTreeCellRenderer - Class in org.hkijena.jipipe.desktop.app.cache.cachetree

Renders the tree in JIPipeDesktopResultAlgorithmTree

JIPipeDesktopCacheStateTreeCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.cache.cachetree.JIPipeDesktopCacheStateTreeCellRenderer

Creates new renderer

JIPipeDesktopCacheTreePanel - Class in org.hkijena.jipipe.desktop.app.cache.cachetree

Displays a tree that contains all cached items of a state

JIPipeDesktopCacheTreePanel(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.cache.cachetree.JIPipeDesktopCacheTreePanel

JIPipeDesktopCheckBoxRibbonAction - Class in org.hkijena.jipipe.desktop.commons.components.ribbon

JIPipeDesktopCheckBoxRibbonAction(String, String) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopCheckBoxRibbonAction

JIPipeDesktopCheckBoxRibbonAction(String, String, boolean, Consumer<JCheckBox>) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopCheckBoxRibbonAction

JIPipeDesktopCollectTraceRun - Class in org.hkijena.jipipe.desktop.app.datatracer

JIPipeDesktopCollectTraceRun(JIPipeDesktopProjectWorkbench, JIPipeGraphNode, String, UUID, JIPipeDataTable, int) - Constructor for class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopCollectTraceRun

JIPipeDesktopColorChooserButton - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopColorChooserButton() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopColorChooserButton

JIPipeDesktopColorChooserButton(String) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopColorChooserButton

JIPipeDesktopColorChooserButton.ColorChosenEvent - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopColorChooserButton.ColorChosenEventEmitter - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopColorChooserButton.ColorChosenEventListener - Interface in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopColorIcon - Interface in org.hkijena.jipipe.desktop.commons.components.icons

JIPipeDesktopCompactRunnableQueueButton - Class in org.hkijena.jipipe.desktop.app.running.queue

UI that monitors the queue

JIPipeDesktopCompactRunnableQueueButton(JIPipeDesktopWorkbench, String) - Constructor for class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopCompactRunnableQueueButton

JIPipeDesktopCompactRunnableQueueButton(JIPipeDesktopWorkbench, JIPipeRunnableQueue, String) - Constructor for class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopCompactRunnableQueueButton

JIPipeDesktopCompactRunnableQueueButton(JIPipeDesktopWorkbench, Icon, Icon) - Constructor for class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopCompactRunnableQueueButton

JIPipeDesktopCompactRunnableQueueButton(JIPipeDesktopWorkbench, JIPipeRunnableQueue, Icon, Icon) - Constructor for class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopCompactRunnableQueueButton

JIPipeDesktopCompartmentGraphEditorResultsPanel - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.properties

JIPipeDesktopCompartmentGraphEditorResultsPanel(JIPipeDesktopProjectWorkbench, JIPipeProjectCompartment, JIPipeDesktopCompartmentsGraphEditorUI) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.properties.JIPipeDesktopCompartmentGraphEditorResultsPanel

JIPipeDesktopCompartmentsCopyNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu

JIPipeDesktopCompartmentsCopyNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsCopyNodeUIContextAction

JIPipeDesktopCompartmentsCutNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu

JIPipeDesktopCompartmentsCutNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsCutNodeUIContextAction

JIPipeDesktopCompartmentsGraphEditorRunManager - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.actions

JIPipeDesktopCompartmentsGraphEditorRunManager(JIPipeProject, JIPipeDesktopGraphCanvasUI, JIPipeDesktopGraphNodeUI, JIPipeDesktopDockPanel, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.actions.JIPipeDesktopCompartmentsGraphEditorRunManager

JIPipeDesktopCompartmentsGraphEditorUI - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments

Graph editor UI for a project compartment graph

JIPipeDesktopCompartmentsGraphEditorUI(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.JIPipeDesktopCompartmentsGraphEditorUI

JIPipeDesktopCompartmentsParametersPanel - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.properties

JIPipeDesktopCompartmentsParametersPanel(JIPipeDesktopProjectWorkbench, JIPipeDesktopGraphCanvasUI, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.properties.JIPipeDesktopCompartmentsParametersPanel

JIPipeDesktopCompartmentsPasteNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu

JIPipeDesktopCompartmentsPasteNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsPasteNodeUIContextAction

JIPipeDesktopCompartmentsQuickGuidePanel - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.properties

JIPipeDesktopCompartmentsQuickGuidePanel(JIPipeDesktopWorkbench, JIPipeDesktopCompartmentsGraphEditorUI) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.properties.JIPipeDesktopCompartmentsQuickGuidePanel

JIPipeDesktopCompendiumUI<T> - Class in org.hkijena.jipipe.desktop.app.documentation

A browsable list of help pages

JIPipeDesktopCompendiumUI(MarkdownText) - Constructor for class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopCompendiumUI

Creates a new instance

JIPipeDesktopComponentCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.renderers

JIPipeDesktopComponentCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopComponentCellRenderer

JIPipeDesktopComponentListCellRenderer<T extends Component> - Class in org.hkijena.jipipe.desktop.commons.components.renderers

JIPipeDesktopComponentListCellRenderer(Icon) - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopComponentListCellRenderer

JIPipeDesktopCurrentStateSnapshot - Class in org.hkijena.jipipe.desktop.app.history

A snapshot that indicates the current state.

JIPipeDesktopCurrentStateSnapshot() - Constructor for class org.hkijena.jipipe.desktop.app.history.JIPipeDesktopCurrentStateSnapshot

JIPipeDesktopCustomRunSettingsUI - Class in org.hkijena.jipipe.desktop.app.running

Settings UI for JIPipeGraphRunConfiguration

JIPipeDesktopCustomRunSettingsUI(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopCustomRunSettingsUI

JIPipeDesktopCustomTabbedPaneUI - Class in org.hkijena.jipipe.desktop.commons.theme

MetalTabbedPaneUI without the slants

JIPipeDesktopCustomTabbedPaneUI() - Constructor for class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

JIPipeDesktopCustomTabbedPaneUI.TabbedPaneLayout - Class in org.hkijena.jipipe.desktop.commons.theme

This class should be treated as a "protected" inner class.

JIPipeDesktopDarkModernMetalTheme - Class in org.hkijena.jipipe.desktop.commons.theme

JIPipeDesktopDarkModernMetalTheme() - Constructor for class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

Creates an instance of OceanTheme

JIPipeDesktopDataBatchAssistantBatchPanel - Class in org.hkijena.jipipe.desktop.app.batchassistant

JIPipeDesktopDataBatchAssistantBatchPanel(JIPipeDesktopProjectWorkbench, JIPipeDesktopDataBatchAssistantUI) - Constructor for class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantBatchPanel

JIPipeDesktopDataBatchAssistantDataTableUI - Class in org.hkijena.jipipe.desktop.app.batchassistant

UI that displays a JIPipeDataTable that is cached

JIPipeDesktopDataBatchAssistantDataTableUI(JIPipeDesktopWorkbench, JIPipeDataTable) - Constructor for class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantDataTableUI

JIPipeDesktopDataBatchAssistantDataTableUI.BatchIndexCellRenderer - Class in org.hkijena.jipipe.desktop.app.batchassistant

JIPipeDesktopDataBatchAssistantDataTableUI.WrapperColumnHeaderRenderer - Class in org.hkijena.jipipe.desktop.app.batchassistant

Renders the column header of JIPipeDesktopDataBatchAssistantTableModel

JIPipeDesktopDataBatchAssistantInputPreviewPanel - Class in org.hkijena.jipipe.desktop.app.batchassistant

JIPipeDesktopDataBatchAssistantInputPreviewPanel(JIPipeDesktopWorkbench, JIPipeDesktopDataBatchAssistantUI) - Constructor for class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantInputPreviewPanel

JIPipeDesktopDataBatchAssistantInputPreviewPanelTable - Class in org.hkijena.jipipe.desktop.app.batchassistant

JIPipeDesktopDataBatchAssistantInputPreviewPanelTable(JIPipeDesktopDataBatchAssistantInputPreviewPanel, JIPipeInputDataSlot, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantInputPreviewPanelTable

JIPipeDesktopDataBatchAssistantTableModel - Class in org.hkijena.jipipe.desktop.app.batchassistant

Wraps around a JIPipeDataTable to display additional columns.

JIPipeDesktopDataBatchAssistantTableModel(JTable, JIPipeDataTable) - Constructor for class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantTableModel

Creates a new instance

JIPipeDesktopDataBatchAssistantUI - Class in org.hkijena.jipipe.desktop.app.batchassistant

A tool that assists the user in configuring batch generation for JIPipeIteratingAlgorithm and JIPipeMergingAlgorithm

JIPipeDesktopDataBatchAssistantUI(JIPipeDesktopProjectWorkbench, JIPipeGraphNode, Runnable) - Constructor for class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantUI

JIPipeDesktopDataBatchBrowserUI - Class in org.hkijena.jipipe.desktop.app.batchassistant

Browser for a Iteration step, similar to the cache browser

JIPipeDesktopDataBatchBrowserUI(JIPipeDesktopWorkbench, JIPipeMultiIterationStep) - Constructor for class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchBrowserUI

JIPipeDesktopDataBatchTree - Class in org.hkijena.jipipe.desktop.app.batchassistant

Displays a tree that contains data stored in a iteration step

JIPipeDesktopDataBatchTree(JIPipeDesktopWorkbench, JIPipeMultiIterationStep) - Constructor for class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchTree

JIPipeDesktopDataBatchUI - Class in org.hkijena.jipipe.desktop.app.batchassistant

JIPipeDesktopDataBatchUI(JIPipeDesktopProjectWorkbench, JIPipeGraphNode, JIPipeMultiIterationStep) - Constructor for class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchUI

JIPipeDesktopDataDisplayOperation - Interface in org.hkijena.jipipe.desktop.api.data

An operation that is executed on showing existing data located in memory/cache.

JIPipeDesktopDataExporterRun - Class in org.hkijena.jipipe.desktop.app.cache.exporters

JIPipeDesktopDataExporterRun(JIPipeData, Path, String) - Constructor for class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataExporterRun

JIPipeDesktopDataInfoCellRenderer - Class in org.hkijena.jipipe.desktop.app.cache

Renders JIPipeData

JIPipeDesktopDataInfoCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopDataInfoCellRenderer

Create new instance

JIPipeDesktopDataInfoListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.renderers

Renders JIPipeDataInfo

JIPipeDesktopDataInfoListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopDataInfoListCellRenderer

Creates a new renderer

JIPipeDesktopDataInfoRefListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.renderers

Renders JIPipeDataInfoRef

JIPipeDesktopDataInfoRefListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopDataInfoRefListCellRenderer

Creates a new renderer

JIPipeDesktopDataPreviewControlUI - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopDataPreviewControlUI() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopDataPreviewControlUI

JIPipeDesktopDataSlotListCellRenderer - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.properties

Renders a JIPipeDataSlot

JIPipeDesktopDataSlotListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.properties.JIPipeDesktopDataSlotListCellRenderer

JIPipeDesktopDataSlotTableColumnHeaderRenderer - Class in org.hkijena.jipipe.desktop.app.resultanalysis.renderers

Renders additional String columns in a table

JIPipeDesktopDataSlotTableColumnHeaderRenderer(JIPipeDataTableInfo) - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopDataSlotTableColumnHeaderRenderer

Creates a new instance

JIPipeDesktopDataSlotTreeCellRenderer - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.properties

Renders an JIPipeDataSlot in a JTree

JIPipeDesktopDataSlotTreeCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.properties.JIPipeDesktopDataSlotTreeCellRenderer

Creates a new renderer

JIPipeDesktopDataTableRowDisplayUtil - Class in org.hkijena.jipipe.desktop.app.cache

UI for a row

JIPipeDesktopDataTableRowDisplayUtil(JIPipeDesktopWorkbench, Store<JIPipeDataTable>, int) - Constructor for class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopDataTableRowDisplayUtil

Creates a new instance

JIPipeDesktopDataTableToFilesByMetadataExporterRun - Class in org.hkijena.jipipe.desktop.app.cache.exporters

JIPipeDesktopDataTableToFilesByMetadataExporterRun(JIPipeDesktopWorkbench, List<? extends JIPipeDataTable>, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToFilesByMetadataExporterRun

JIPipeDesktopDataTableToFilesByMetadataExporterRun.Settings - Class in org.hkijena.jipipe.desktop.app.cache.exporters

JIPipeDesktopDataTableToOutputExporterRun - Class in org.hkijena.jipipe.desktop.app.cache.exporters

JIPipeDesktopDataTableToOutputExporterRun(JIPipeDesktopWorkbench, Path, List<? extends JIPipeDataTable>, boolean, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToOutputExporterRun

JIPipeDesktopDataTableToZIPExporterRun - Class in org.hkijena.jipipe.desktop.app.cache.exporters

JIPipeDesktopDataTableToZIPExporterRun(JIPipeDesktopWorkbench, Path, JIPipeDataTable) - Constructor for class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToZIPExporterRun

JIPipeDesktopDataTracerDataTableUI - Class in org.hkijena.jipipe.desktop.app.datatracer

UI that displays a JIPipeDataTable that is cached

JIPipeDesktopDataTracerDataTableUI(JIPipeDesktopWorkbench, Store<JIPipeDataTable>) - Constructor for class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerDataTableUI

JIPipeDesktopDataTracerDataTableUI.WrapperColumnHeaderRenderer - Class in org.hkijena.jipipe.desktop.app.datatracer

Renders the column header of JIPipeDesktopDataTracerTableModel

JIPipeDesktopDataTracerNodeOutputUI - Class in org.hkijena.jipipe.desktop.app.datatracer

JIPipeDesktopDataTracerNodeOutputUI(JIPipeDesktopProjectWorkbench, String, String, JIPipeDataTable, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerNodeOutputUI

JIPipeDesktopDataTracerTableModel - Class in org.hkijena.jipipe.desktop.app.datatracer

Wraps around a JIPipeDataTable to display additional columns.

JIPipeDesktopDataTracerTableModel(JTable, Store<JIPipeDataTable>) - Constructor for class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerTableModel

Creates a new instance

JIPipeDesktopDataTracerUI - Class in org.hkijena.jipipe.desktop.app.datatracer

JIPipeDesktopDataTracerUI(JIPipeDesktopProjectWorkbench, JIPipeGraphNode, String, UUID, JIPipeDataTable, int) - Constructor for class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerUI

JIPipeDesktopDataTypePicker - Class in org.hkijena.jipipe.desktop.commons.components.pickers

Panel that allows to pick JIPipeDataInfo

JIPipeDesktopDataTypePicker(JIPipeDesktopDataTypePicker.Mode, Set<JIPipeDataInfo>) - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker

JIPipeDesktopDataTypePicker.DataTypeDeselectedEvent - Class in org.hkijena.jipipe.desktop.commons.components.pickers

Generated when a data type is deselected

JIPipeDesktopDataTypePicker.DataTypeDeselectedEventEmitter - Class in org.hkijena.jipipe.desktop.commons.components.pickers

JIPipeDesktopDataTypePicker.DataTypeDeselectedEventListener - Interface in org.hkijena.jipipe.desktop.commons.components.pickers

JIPipeDesktopDataTypePicker.DataTypeSelectedEvent - Class in org.hkijena.jipipe.desktop.commons.components.pickers

Generated when a data type is selected

JIPipeDesktopDataTypePicker.DataTypeSelectedEventEmitter - Class in org.hkijena.jipipe.desktop.commons.components.pickers

JIPipeDesktopDataTypePicker.DataTypeSelectedEventListener - Interface in org.hkijena.jipipe.desktop.commons.components.pickers

JIPipeDesktopDataTypePicker.Mode - Enum in org.hkijena.jipipe.desktop.commons.components.pickers

The mode of the picker

JIPipeDesktopDataTypePicker.Renderer - Class in org.hkijena.jipipe.desktop.commons.components.pickers

Renders an item

JIPipeDesktopDataTypePicker.SelectedDataTypesChangedEvent - Class in org.hkijena.jipipe.desktop.commons.components.pickers

Generated when a data type is selected

JIPipeDesktopDataTypePicker.SelectedDataTypesChangedEventEmitter - Class in org.hkijena.jipipe.desktop.commons.components.pickers

JIPipeDesktopDataTypePicker.SelectedDataTypesChangedEventListener - Interface in org.hkijena.jipipe.desktop.commons.components.pickers

JIPipeDesktopDataViewer - Class in org.hkijena.jipipe.desktop.api.dataviewer

A viewer for JIPipeData

JIPipeDesktopDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewer

JIPipeDesktopDataViewerTextAnnotationsPanel - Class in org.hkijena.jipipe.desktop.api.dataviewer

JIPipeDesktopDataViewerTextAnnotationsPanel(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerTextAnnotationsPanel

JIPipeDesktopDataViewerTextAnnotationsPanel.Renderer - Class in org.hkijena.jipipe.desktop.api.dataviewer

JIPipeDesktopDataViewerWindow - Class in org.hkijena.jipipe.desktop.api.dataviewer

Window that displays data using JIPipeDesktopDataViewer

JIPipeDesktopDataViewerWindow(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow

JIPipeDesktopDataViewerWindow.DownloadFullDataRun - Class in org.hkijena.jipipe.desktop.api.dataviewer

JIPipeDesktopDefaultDataViewer - Class in org.hkijena.jipipe.desktop.api.dataviewer

JIPipeDesktopDefaultDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDefaultDataViewer

JIPipeDesktopDefaultResultDataSlotPreview - Class in org.hkijena.jipipe.desktop.app.resultanalysis

Renders a JIPipeDataSlot row as table cell

JIPipeDesktopDefaultResultDataSlotPreview(JIPipeDesktopProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableRowInfo, JIPipeDataAnnotationInfo) - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopDefaultResultDataSlotPreview

Creates a new renderer

JIPipeDesktopDefaultResultDataSlotRowUI - Class in org.hkijena.jipipe.desktop.app.resultanalysis

Provides a standard result slot UI that can be also further extended.

JIPipeDesktopDefaultResultDataSlotRowUI(JIPipeDesktopProjectWorkbench, JIPipeDataSlot, JIPipeDataTableRowInfo) - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopDefaultResultDataSlotRowUI

Creates a new UI

JIPipeDesktopDnDTabbedPane - Class in org.hkijena.jipipe.desktop.commons.components.tabs

See ...

JIPipeDesktopDnDTabbedPane(int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPane

JIPipeDesktopDnDTabbedPaneGhostGlassPane - Class in org.hkijena.jipipe.desktop.commons.components.tabs

JIPipeDesktopDnDTabbedPaneGhostGlassPane(JIPipeDesktopDnDTabbedPane) - Constructor for class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneGhostGlassPane

JIPipeDesktopDnDTabbedPaneTabDragGestureListener - Class in org.hkijena.jipipe.desktop.commons.components.tabs

JIPipeDesktopDnDTabbedPaneTabDragGestureListener() - Constructor for class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneTabDragGestureListener

JIPipeDesktopDnDTabbedPaneTabDragSourceListener - Class in org.hkijena.jipipe.desktop.commons.components.tabs

JIPipeDesktopDnDTabbedPaneTabDragSourceListener() - Constructor for class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneTabDragSourceListener

JIPipeDesktopDnDTabbedPaneTabDropTargetListener - Class in org.hkijena.jipipe.desktop.commons.components.tabs

JIPipeDesktopDnDTabbedPaneTabDropTargetListener() - Constructor for class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneTabDropTargetListener

JIPipeDesktopDnDTabbedPaneTabTransferable - Class in org.hkijena.jipipe.desktop.commons.components.tabs

JIPipeDesktopDnDTabbedPaneTabTransferable(Component) - Constructor for class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneTabTransferable

JIPipeDesktopDockPanel - Class in org.hkijena.jipipe.utils.ui

JIPipeDesktopDockPanel() - Constructor for class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

JIPipeDesktopDockPanel.Panel - Class in org.hkijena.jipipe.utils.ui

JIPipeDesktopDockPanel.PanelLocation - Enum in org.hkijena.jipipe.utils.ui

JIPipeDesktopDockPanel.PanelSide - Enum in org.hkijena.jipipe.utils.ui

JIPipeDesktopDockPanel.PanelSideVisibilityChangedEvent - Class in org.hkijena.jipipe.utils.ui

JIPipeDesktopDockPanel.PanelSideVisibilityChangedEventEmitter - Class in org.hkijena.jipipe.utils.ui

JIPipeDesktopDockPanel.PanelSideVisibilityChangedEventListener - Interface in org.hkijena.jipipe.utils.ui

JIPipeDesktopDockPanel.State - Class in org.hkijena.jipipe.utils.ui

JIPipeDesktopDockPanel.StateSavedEvent - Class in org.hkijena.jipipe.utils.ui

JIPipeDesktopDockPanel.StateSavedEventEmitter - Class in org.hkijena.jipipe.utils.ui

JIPipeDesktopDockPanel.StateSavedEventListener - Interface in org.hkijena.jipipe.utils.ui

JIPipeDesktopDocumentChangeListener - Class in org.hkijena.jipipe.desktop.commons.components

Listener for any changes in a Document

JIPipeDesktopDocumentChangeListener() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopDocumentChangeListener

JIPipeDesktopDocumentedComponent - Class in org.hkijena.jipipe.desktop.commons.components

Wrapper around a component that adds a split pane that shows documentation

JIPipeDesktopDocumentedComponent(boolean, MarkdownText, Component) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopDocumentedComponent

JIPipeDesktopDropShadowRenderer - Class in org.hkijena.jipipe.desktop.commons.components.renderers

JIPipeDesktopDropShadowRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopDropShadowRenderer

JIPipeDesktopDropShadowRenderer(Color, int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopDropShadowRenderer

JIPipeDesktopDropShadowRenderer(boolean) - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopDropShadowRenderer

JIPipeDesktopDropShadowRenderer(Color, int, float, int, boolean, boolean, boolean, boolean) - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopDropShadowRenderer

JIPipeDesktopDummyWorkbench - Class in org.hkijena.jipipe.desktop.app

JIPipeDesktopDummyWorkbench() - Constructor for class org.hkijena.jipipe.desktop.app.JIPipeDesktopDummyWorkbench

JIPipeDesktopDynamicParameterEditorDialog - Class in org.hkijena.jipipe.desktop.commons.components.parameters

JIPipeDesktopDynamicParameterEditorDialog(Component, JIPipeDesktopWorkbench, JIPipeDynamicParameterCollection) - Constructor for class org.hkijena.jipipe.desktop.commons.components.parameters.JIPipeDesktopDynamicParameterEditorDialog

JIPipeDesktopDynamicParameterEditorDialog.ParameterEntry - Class in org.hkijena.jipipe.desktop.commons.components.parameters

JIPipeDesktopDynamicParameterEditorDialog.ParameterEntryListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.parameters

JIPipeDesktopEasyInstallExternalEnvironmentInstaller<T extends JIPipeEnvironment> - Class in org.hkijena.jipipe.desktop.api.environments

Environment installer that extracts a premade package of the environment and generates the appropriate environment Supported are .tar.gz and .zip archives that should contain the hierarchy of files as expected in the environment installation directory.

JIPipeDesktopEasyInstallExternalEnvironmentInstaller(JIPipeDesktopWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstaller

JIPipeDesktopEasyInstallExternalEnvironmentInstallerDialog - Class in org.hkijena.jipipe.desktop.api.environments

JIPipeDesktopEasyInstallExternalEnvironmentInstallerDialog(JIPipeDesktopEasyInstallExternalEnvironmentInstaller<?>) - Constructor for class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerDialog

JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage - Class in org.hkijena.jipipe.desktop.api.environments

JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage() - Constructor for class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage.Serializer - Class in org.hkijena.jipipe.desktop.api.environments

JIPipeDesktopEditAlgorithmSlotPanel - Class in org.hkijena.jipipe.desktop.commons.components

UI that edits an existing algorithm slot

JIPipeDesktopEditAlgorithmSlotPanel(JIPipeDataSlot, JIPipeHistoryJournal) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopEditAlgorithmSlotPanel

Creates a new instance

JIPipeDesktopExpressionCalculatorUI - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopExpressionCalculatorUI(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopExpressionCalculatorUI

JIPipeDesktopExpressionCalculatorUI.ResultItem - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopExtendedDataTableModel - Class in org.hkijena.jipipe.desktop.app.datatable

Wraps around a JIPipeDataTable to display additional columns.

JIPipeDesktopExtendedDataTableModel(JTable, Store<JIPipeDataTable>) - Constructor for class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableModel

Creates a new instance

JIPipeDesktopExtendedDataTableSearchTextFieldTableRowFilter - Class in org.hkijena.jipipe.desktop.commons.components.search

Filters entries via a JIPipeDesktopSearchTextField that can contain search keys, but also a filter expression to filter specific columns.

JIPipeDesktopExtendedDataTableSearchTextFieldTableRowFilter(JIPipeDesktopSearchTextField) - Constructor for class org.hkijena.jipipe.desktop.commons.components.search.JIPipeDesktopExtendedDataTableSearchTextFieldTableRowFilter

JIPipeDesktopExtendedDataTableUI - Class in org.hkijena.jipipe.desktop.app.datatable

UI that displays a JIPipeDataTable that is cached

JIPipeDesktopExtendedDataTableUI(JIPipeDesktopWorkbench, Store<JIPipeDataTable>, boolean, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableUI

JIPipeDesktopExtendedDataTableUI.WrapperColumnHeaderRenderer - Class in org.hkijena.jipipe.desktop.app.datatable

Renders the column header of JIPipeDesktopExtendedDataTableModel

JIPipeDesktopExtendedImageView - Class in org.hkijena.jipipe.desktop.commons.components.markup

ImageView capable of decoding Base64 images See ...

JIPipeDesktopExtendedImageView(Element) - Constructor for class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Creates a new view that represents an IMG element.

JIPipeDesktopExtendedMultiDataTableModel - Class in org.hkijena.jipipe.desktop.app.datatable

Merges multiple JIPipeDataTable Please not the previews are initialized with deferred rendering.

JIPipeDesktopExtendedMultiDataTableModel(JTable, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

JIPipeDesktopExtendedMultiDataTableUI - Class in org.hkijena.jipipe.desktop.app.datatable

Displays multiple JIPipeDataTable in one table.

JIPipeDesktopExtendedMultiDataTableUI(JIPipeDesktopWorkbench, List<Store<JIPipeDataTable>>, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableUI

JIPipeDesktopExtendedMultiDataTableUI.MultiDataSlotTableColumnRenderer - Class in org.hkijena.jipipe.desktop.app.datatable

Renders the column header

JIPipeDesktopExternalEnvironmentInstaller - Class in org.hkijena.jipipe.desktop.api.environments

JIPipeDesktopExternalEnvironmentInstaller(JIPipeDesktopWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopExternalEnvironmentInstaller

JIPipeDesktopExternalEnvironmentParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.jipipe

JIPipeDesktopExternalEnvironmentParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeDesktopExternalEnvironmentParameterEditorUI

JIPipeDesktopFancyPasswordField - Class in org.hkijena.jipipe.desktop.commons.components

A JXTextField with some fancy additions

JIPipeDesktopFancyPasswordField(JLabel) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyPasswordField

Creates a new instance

JIPipeDesktopFancyReadOnlyTextArea - Class in org.hkijena.jipipe.desktop.commons.components

A JXTextField with some fancy additions

JIPipeDesktopFancyReadOnlyTextArea(String, boolean) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyReadOnlyTextArea

JIPipeDesktopFancyReadOnlyTextField - Class in org.hkijena.jipipe.desktop.commons.components

A JXTextField with some fancy additions

JIPipeDesktopFancyReadOnlyTextField(String, boolean) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyReadOnlyTextField

JIPipeDesktopFancyTextField - Class in org.hkijena.jipipe.desktop.commons.components

A JXTextField with some fancy additions

JIPipeDesktopFancyTextField(JLabel, String, boolean) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyTextField

Creates a new instance

JIPipeDesktopFileChooserNext - Class in org.hkijena.jipipe.desktop.commons.components.filechoosernext

JIPipeDesktopFileChooserNext(JIPipeWorkbench, HTMLText, Path, PathIOMode, PathType, boolean, FileNameExtensionFilter...) - Constructor for class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNext

JIPipeDesktopFileChooserNextDateTableCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.filechoosernext

JIPipeDesktopFileChooserNextDateTableCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextDateTableCellRenderer

JIPipeDesktopFileChooserNextPathTableCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.filechoosernext

JIPipeDesktopFileChooserNextPathTableCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextPathTableCellRenderer

JIPipeDesktopFileChooserNextPathTypeMetadata - Class in org.hkijena.jipipe.desktop.commons.components.filechoosernext

JIPipeDesktopFileChooserNextPathTypeMetadata(String, PathType, Set<String>, Icon) - Constructor for class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextPathTypeMetadata

JIPipeDesktopFileChooserNextSizeTableCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.filechoosernext

JIPipeDesktopFileChooserNextSizeTableCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextSizeTableCellRenderer

JIPipeDesktopFileChooserNextTableFilter - Class in org.hkijena.jipipe.desktop.commons.components.filechoosernext

JIPipeDesktopFileChooserNextTableFilter(FileNameExtensionFilter, String) - Constructor for class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextTableFilter

JIPipeDesktopFileChooserNextTableModel - Class in org.hkijena.jipipe.desktop.commons.components.filechoosernext

JIPipeDesktopFileChooserNextTableModel(Path, boolean, boolean) - Constructor for class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextTableModel

JIPipeDesktopFlexContentPanel - Class in org.hkijena.jipipe.desktop.commons.components

A panel that holds a toolbar, ribbon, and sidebar.

JIPipeDesktopFlexContentPanel() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentPanel

JIPipeDesktopFlexContentPanel(int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentPanel

JIPipeDesktopFlexContentWorkbenchPanel - Class in org.hkijena.jipipe.desktop.commons.components

A content panel with access to a JIPipeWorkbench

JIPipeDesktopFlexContentWorkbenchPanel(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentWorkbenchPanel

JIPipeDesktopFlexContentWorkbenchPanel(JIPipeDesktopWorkbench, int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentWorkbenchPanel

JIPipeDesktopFlowLayout - Class in org.hkijena.jipipe.desktop.commons.components.layouts

A modified version of FlowLayout that allows containers using this Layout to behave in a reasonable manner when placed inside a JScrollPane

JIPipeDesktopFlowLayout() - Constructor for class org.hkijena.jipipe.desktop.commons.components.layouts.JIPipeDesktopFlowLayout

JIPipeDesktopFlowLayout(int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.layouts.JIPipeDesktopFlowLayout

JIPipeDesktopFlowLayout(int, int, int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.layouts.JIPipeDesktopFlowLayout

JIPipeDesktopFormHelpPanel - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopFormHelpPanel() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormHelpPanel

JIPipeDesktopFormPanel - Class in org.hkijena.jipipe.desktop.commons.components

Organizes UI in a form layout with integrated help functionality, and grouping with conditional visibility

JIPipeDesktopFormPanel(int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

JIPipeDesktopFormPanel(MarkdownText, int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Creates a new instance

JIPipeDesktopFormPanel.ContextHelpEvent - Class in org.hkijena.jipipe.desktop.commons.components

Event triggered when the user triggers a hover-help

JIPipeDesktopFormPanel.ContextHelpEventEmitter - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopFormPanel.ContextHelpEventListener - Interface in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopFormPanel.FormPanelContentPanel - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopFormPanel.FormPanelEntry - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopFormPanel.GroupHeaderPanel - Class in org.hkijena.jipipe.desktop.commons.components

Panel that contains a group header

JIPipeDesktopFormPanelImageComponent - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopFormPanelImageComponent(BufferedImage, boolean) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanelImageComponent

JIPipeDesktopGenericListCellRenderer<T> - Class in org.hkijena.jipipe.desktop.commons.components.renderers

JIPipeDesktopGenericListCellRenderer(Function<T, JIPipeDesktopGenericListCellRenderer.RenderedItem>) - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopGenericListCellRenderer

JIPipeDesktopGenericListCellRenderer.RenderedItem - Class in org.hkijena.jipipe.desktop.commons.components.renderers

JIPipeDesktopGenericNotificationButton - Class in org.hkijena.jipipe.desktop.commons.notifications

UI that monitors the queue

JIPipeDesktopGenericNotificationButton(JIPipeDesktopWorkbench, JIPipeNotificationInbox) - Constructor for class org.hkijena.jipipe.desktop.commons.notifications.JIPipeDesktopGenericNotificationButton

JIPipeDesktopGenericNotificationInboxUI - Class in org.hkijena.jipipe.desktop.commons.notifications

JIPipeDesktopGenericNotificationInboxUI(JIPipeDesktopWorkbench, JIPipeNotificationInbox) - Constructor for class org.hkijena.jipipe.desktop.commons.notifications.JIPipeDesktopGenericNotificationInboxUI

JIPipeDesktopGenericNotificationUI - Class in org.hkijena.jipipe.desktop.commons.notifications

JIPipeDesktopGenericNotificationUI(JIPipeDesktopGenericNotificationInboxUI, JIPipeNotification, boolean, boolean) - Constructor for class org.hkijena.jipipe.desktop.commons.notifications.JIPipeDesktopGenericNotificationUI

JIPipeDesktopGraphCanvasUI - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons

UI that displays an JIPipeGraph

JIPipeDesktopGraphCanvasUI(JIPipeDesktopWorkbench, AbstractJIPipeDesktopGraphEditorUI, JIPipeGraph, UUID, JIPipeHistoryJournal) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Creates a new UI

JIPipeDesktopGraphCanvasUI.ConnectHighlight - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons

JIPipeDesktopGraphCanvasUI.DisconnectHighlight - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons

JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons

JIPipeDesktopGraphCanvasUI.EdgeMuteMode - Enum in org.hkijena.jipipe.desktop.app.grapheditor.commons

JIPipeDesktopGraphCanvasUI.GraphCanvasUpdatedEvent - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons

Triggered when a graph canvas was updated

JIPipeDesktopGraphCanvasUI.GraphCanvasUpdatedEventEmitter - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons

JIPipeDesktopGraphCanvasUI.GraphCanvasUpdatedEventListener - Interface in org.hkijena.jipipe.desktop.app.grapheditor.commons

JIPipeDesktopGraphCanvasUI.NodeSelectionChangedEvent - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons

Triggered when An JIPipeDesktopGraphCanvasUI selection was changed

JIPipeDesktopGraphCanvasUI.NodeSelectionChangedEventEmitter - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons

JIPipeDesktopGraphCanvasUI.NodeSelectionChangedEventListener - Interface in org.hkijena.jipipe.desktop.app.grapheditor.commons

JIPipeDesktopGraphCanvasUI.NodeUISelectedEvent - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons

Generated when an algorithm is selected

JIPipeDesktopGraphCanvasUI.NodeUISelectedEventEmitter - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons

JIPipeDesktopGraphCanvasUI.NodeUISelectedEventListener - Interface in org.hkijena.jipipe.desktop.app.grapheditor.commons

JIPipeDesktopGraphDragAndDropBehavior - Interface in org.hkijena.jipipe.desktop.app.grapheditor.commons

Provides Drag and Drop behavior for JIPipeDesktopGraphCanvasUI

JIPipeDesktopGraphEditorErrorPanel - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.properties

JIPipeDesktopGraphEditorErrorPanel(JIPipeDesktopWorkbench, AbstractJIPipeDesktopGraphEditorUI) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.properties.JIPipeDesktopGraphEditorErrorPanel

JIPipeDesktopGraphEditorLogPanel - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons

JIPipeDesktopGraphEditorLogPanel(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorLogPanel

JIPipeDesktopGraphEditorMinimap - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons

Renders a overview of the graph

JIPipeDesktopGraphEditorMinimap(AbstractJIPipeDesktopGraphEditorUI) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorMinimap

JIPipeDesktopGraphEditorRunManager - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons

JIPipeDesktopGraphEditorRunManager(JIPipeProject, JIPipeDesktopGraphCanvasUI, JIPipeDesktopGraphNodeUI, JIPipeDesktopDockPanel, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorRunManager

JIPipeDesktopGraphEditorToolBarButtonExtension - Class in org.hkijena.jipipe.desktop.api

JIPipeDesktopGraphEditorToolBarButtonExtension(AbstractJIPipeDesktopGraphEditorUI) - Constructor for class org.hkijena.jipipe.desktop.api.JIPipeDesktopGraphEditorToolBarButtonExtension

Creates a new instance

JIPipeDesktopGraphNodeParameterReferenceGroupCollectionEditorUI - Class in org.hkijena.jipipe.desktop.app.parameterreference

Editor component for GraphNodeParameterReferenceGroupCollection

JIPipeDesktopGraphNodeParameterReferenceGroupCollectionEditorUI(JIPipeDesktopWorkbench, GraphNodeParameterReferenceGroupCollection, MarkdownText, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.parameterreference.JIPipeDesktopGraphNodeParameterReferenceGroupCollectionEditorUI

JIPipeDesktopGraphNodeSlotEditorUI - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.properties

An extended slot editor that is more powerful than the "in-place" slot editor

JIPipeDesktopGraphNodeSlotEditorUI(AbstractJIPipeDesktopGraphEditorUI, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.properties.JIPipeDesktopGraphNodeSlotEditorUI

JIPipeDesktopGraphNodeUI - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui

UI around an JIPipeGraphNode instance

JIPipeDesktopGraphNodeUI(JIPipeDesktopWorkbench, JIPipeDesktopGraphCanvasUI, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

Creates a new UI

JIPipeDesktopGraphNodeUI.DefaultNodeUIActionRequestedEvent - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui

Triggered when an JIPipeDesktopGraphNodeUI requests a default action (double click)

JIPipeDesktopGraphNodeUI.DefaultNodeUIActionRequestedEventEmitter - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui

JIPipeDesktopGraphNodeUI.DefaultNodeUIActionRequestedEventListener - Interface in org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui

JIPipeDesktopGraphNodeUI.NodeUIActionRequestedEvent - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui

An action that is requested by an JIPipeDesktopGraphNodeUI and passed down to a AbstractJIPipeDesktopGraphEditorUI

JIPipeDesktopGraphNodeUI.NodeUIActionRequestedEventEmitter - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui

JIPipeDesktopGraphNodeUI.NodeUIActionRequestedEventListener - Interface in org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui

JIPipeDesktopGraphNodeUI.SlotStatus - Enum in org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui

JIPipeDesktopGraphNodeUIActiveArea - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui

JIPipeDesktopGraphNodeUIActiveArea(JIPipeDesktopGraphNodeUI, int) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUIActiveArea

JIPipeDesktopGraphNodeUIAddSlotButtonActiveArea - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers

JIPipeDesktopGraphNodeUIAddSlotButtonActiveArea(JIPipeDesktopGraphNodeUI, JIPipeSlotType) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUIAddSlotButtonActiveArea

JIPipeDesktopGraphNodeUIRunNodeActiveArea - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers

JIPipeDesktopGraphNodeUIRunNodeActiveArea(JIPipeDesktopGraphNodeUI) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUIRunNodeActiveArea

JIPipeDesktopGraphNodeUISlotActiveArea - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers

Active area that stores the state of a slot

JIPipeDesktopGraphNodeUISlotActiveArea(JIPipeDesktopGraphNodeUI, JIPipeSlotType, String, JIPipeDataSlot) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

JIPipeDesktopGraphNodeUISlotButtonActiveArea - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers

JIPipeDesktopGraphNodeUISlotButtonActiveArea(JIPipeDesktopGraphNodeUI, JIPipeDesktopGraphNodeUISlotActiveArea) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotButtonActiveArea

JIPipeDesktopGraphNodeUIWholeNodeActiveArea - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers

JIPipeDesktopGraphNodeUIWholeNodeActiveArea(JIPipeDesktopGraphNodeUI) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUIWholeNodeActiveArea

JIPipeDesktopHistoryJournalUI - Class in org.hkijena.jipipe.desktop.app.history

JIPipeDesktopHistoryJournalUI(JIPipeHistoryJournal) - Constructor for class org.hkijena.jipipe.desktop.app.history.JIPipeDesktopHistoryJournalUI

JIPipeDesktopHistorySnapshotListCellRenderer - Class in org.hkijena.jipipe.desktop.app.history

Renderer for JIPipeHistoryJournalSnapshot

JIPipeDesktopHistorySnapshotListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.history.JIPipeDesktopHistorySnapshotListCellRenderer

Creates a new renderer

JIPipeDesktopHTMLEditor - Class in org.hkijena.jipipe.desktop.commons.components.markup

JIPipeDesktopHTMLEditor(JIPipeDesktopWorkbench, JIPipeDesktopHTMLEditor.Mode, int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

JIPipeDesktopHTMLEditor.Mode - Enum in org.hkijena.jipipe.desktop.commons.components.markup

JIPipeDesktopHTMLEditor.StrikeThroughAction - Class in org.hkijena.jipipe.desktop.commons.components.markup

JIPipeDesktopHTMLEditor.SubscriptAction - Class in org.hkijena.jipipe.desktop.commons.components.markup

JIPipeDesktopHTMLEditor.SuperscriptAction - Class in org.hkijena.jipipe.desktop.commons.components.markup

JIPipeDesktopHTMLEditorKit - Class in org.hkijena.jipipe.desktop.commons.components.markup

HTMLEditorKit

JIPipeDesktopHTMLEditorKit() - Constructor for class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditorKit

JIPipeDesktopIconPickerDialog - Class in org.hkijena.jipipe.desktop.commons.components.pickers

Dialog that picks an icon

JIPipeDesktopIconPickerDialog(Window, String, Set<String>) - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopIconPickerDialog

JIPipeDesktopImageFrameComponent - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopImageFrameComponent(BufferedImage, boolean, SizeFitMode, boolean) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopImageFrameComponent

JIPipeDesktopImageJDataExporterListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.renderers

Renders ImageJDataExporter

JIPipeDesktopImageJDataExporterListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopImageJDataExporterListCellRenderer

Creates a new renderer

JIPipeDesktopImageJDataExporterPicker - Class in org.hkijena.jipipe.desktop.commons.components.pickers

JIPipeDesktopImageJDataExporterPicker(Window) - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopImageJDataExporterPicker

JIPipeDesktopImageJDataImporterListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.renderers

Renders ImageJDataImporter

JIPipeDesktopImageJDataImporterListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopImageJDataImporterListCellRenderer

Creates a new renderer

JIPipeDesktopImageJDataImporterPicker - Class in org.hkijena.jipipe.desktop.commons.components.pickers

JIPipeDesktopImageJDataImporterPicker(Window) - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopImageJDataImporterPicker

JIPipeDesktopImportCachedSlotOutputRun - Class in org.hkijena.jipipe.desktop.app.cache.importers

JIPipeDesktopImportCachedSlotOutputRun(JIPipeProject, JIPipeGraphNode, Path) - Constructor for class org.hkijena.jipipe.desktop.app.cache.importers.JIPipeDesktopImportCachedSlotOutputRun

JIPipeDesktopInheritanceConversionEditorUI - Class in org.hkijena.jipipe.desktop.commons.components

Editor for an inheritance conversion stored in an JIPipeDataSlotInfo

JIPipeDesktopInheritanceConversionEditorUI(Map<JIPipeDataInfo, JIPipeDataInfo>) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopInheritanceConversionEditorUI

JIPipeDesktopInheritanceConversionListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.renderers

Renders inheritance conversion entries

JIPipeDesktopInheritanceConversionListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopInheritanceConversionListCellRenderer

Creates a new renderer

JIPipeDesktopInheritedSlotListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.renderers

Renders an available entry for inherited slot in JIPipeDataSlotInfo

JIPipeDesktopInheritedSlotListCellRenderer(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopInheritedSlotListCellRenderer

JIPipeDesktopInvalidProjectDependenciesInfoDialog - Class in org.hkijena.jipipe.desktop.app.project

Shown when potential issues are detected with the project

JIPipeDesktopInvalidProjectDependenciesInfoDialog(JIPipeDesktopWorkbench, Path, Set<JIPipeDependency>) - Constructor for class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopInvalidProjectDependenciesInfoDialog

JIPipeDesktopJIPipeMergeTablesDialogUI - Class in org.hkijena.jipipe.desktop.app.tableeditor

UI that merges tables

JIPipeDesktopJIPipeMergeTablesDialogUI(JIPipeDesktopTableEditor) - Constructor for class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopJIPipeMergeTablesDialogUI

JIPipeDesktopJIPipeProjectTabMetadata - Class in org.hkijena.jipipe.desktop.app.project

Metadata that allows the restoration of tabs

JIPipeDesktopJIPipeProjectTabMetadata() - Constructor for class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopJIPipeProjectTabMetadata

JIPipeDesktopJIPipeProjectTabMetadata(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopJIPipeProjectTabMetadata

JIPipeDesktopJIPipeTemplateSelectionUI - Class in org.hkijena.jipipe.desktop.app.project

Dialog for selecting templates

JIPipeDesktopJIPipeTemplateSelectionUI(JIPipeDesktopWorkbench, Window) - Constructor for class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopJIPipeTemplateSelectionUI

JIPipeDesktopLargeButtonRibbonAction - Class in org.hkijena.jipipe.desktop.commons.components.ribbon

JIPipeDesktopLargeButtonRibbonAction(String, String, Icon, Runnable) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopLargeButtonRibbonAction

JIPipeDesktopLargeButtonRibbonAction(String, String, Icon, JMenuItem...) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopLargeButtonRibbonAction

JIPipeDesktopLargeToggleButtonRibbonAction - Class in org.hkijena.jipipe.desktop.commons.components.ribbon

JIPipeDesktopLargeToggleButtonRibbonAction(String, String, Icon) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopLargeToggleButtonRibbonAction

JIPipeDesktopLargeToggleButtonRibbonAction(String, String, Icon, boolean, Consumer<JToggleButton>) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopLargeToggleButtonRibbonAction

JIPipeDesktopLegacyAddNodePanel - Class in org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel

JIPipeDesktopLegacyAddNodePanel(JIPipeDesktopWorkbench, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopLegacyAddNodePanel

JIPipeDesktopLegacyAddNodePanel.ReloadListRun - Class in org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel

JIPipeDesktopLegacyCacheDataViewerWindow - Class in org.hkijena.jipipe.desktop.app.cache

Base class for a Window that displays cached data.

JIPipeDesktopLegacyCacheDataViewerWindow(JIPipeDesktopWorkbench, JIPipeDataTableDataSource, String) - Constructor for class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

JIPipeDesktopLegacyImageViewer - Class in org.hkijena.jipipe.plugins.imageviewer.legacy

JIPipeDesktopLegacyImageViewer(JIPipeDesktopWorkbench, List<Class<? extends JIPipeDesktopLegacyImageViewerPlugin>>, JIPipeDesktopDataViewer, Map<Class<?>, Object>) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

Initializes a new image viewer

JIPipeDesktopLegacyImageViewerOverlay - Interface in org.hkijena.jipipe.plugins.imageviewer.legacy.api

Implement this interface to allow overlays to add the necessary plugins into the image viewer

JIPipeDesktopLegacyImageViewerPanel2D - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.impl

JIPipeDesktopLegacyImageViewerPanel2D(JIPipeDesktopLegacyImageViewer) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

Initializes a new image viewer

JIPipeDesktopLegacyImageViewerPanel2D.CompositeLayer - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.impl

JIPipeDesktopLegacyImageViewerPlugin - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.api

JIPipeDesktopLegacyImageViewerPlugin(JIPipeDesktopLegacyImageViewer) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

JIPipeDesktopLegacyImageViewerPlugin2D - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.api

JIPipeDesktopLegacyImageViewerPlugin2D(JIPipeDesktopLegacyImageViewer) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin2D

JIPipeDesktopLoadResultDirectoryIntoCacheRun - Class in org.hkijena.jipipe.desktop.app.project

JIPipeDesktopLoadResultDirectoryIntoCacheRun(JIPipeWorkbench, JIPipeProject, Path, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopLoadResultDirectoryIntoCacheRun

JIPipeDesktopLoadResultZipIntoCacheRun - Class in org.hkijena.jipipe.desktop.app.project

JIPipeDesktopLoadResultZipIntoCacheRun(JIPipeWorkbench, JIPipeProject, Path, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopLoadResultZipIntoCacheRun

JIPipeDesktopLogViewer - Class in org.hkijena.jipipe.desktop.app.running.logs

JIPipeDesktopLogViewer(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopLogViewer

JIPipeDesktopLogViewer.LogEntryRenderer - Class in org.hkijena.jipipe.desktop.app.running.logs

JIPipeDesktopLogViewLogUI - Class in org.hkijena.jipipe.desktop.app.running.logs

JIPipeDesktopLogViewLogUI(JIPipeDesktopWorkbench, JIPipeRunnableLogEntry) - Constructor for class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopLogViewLogUI

JIPipeDesktopMain - Class in org.hkijena.jipipe.desktop

JIPipeDesktopMain() - Constructor for class org.hkijena.jipipe.desktop.JIPipeDesktopMain

JIPipeDesktopMain.WindowWatcher - Class in org.hkijena.jipipe.desktop

JIPipeDesktopMarkdownReader - Class in org.hkijena.jipipe.desktop.commons.components.markup

Panel that allows reading of Markdown data

JIPipeDesktopMarkdownReader() - Constructor for class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopMarkdownReader

JIPipeDesktopMarkdownReader(boolean) - Constructor for class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopMarkdownReader

JIPipeDesktopMarkdownReader(boolean, MarkdownText) - Constructor for class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopMarkdownReader

JIPipeDesktopMarkdownReader(boolean, MarkdownText, List<String>, List<String>) - Constructor for class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopMarkdownReader

JIPipeDesktopMemoryOptionsControl - Class in org.hkijena.jipipe.desktop.commons.components

A tool that automatically runs 'update cache' when any parameter or graph property is changed

JIPipeDesktopMemoryOptionsControl(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMemoryOptionsControl

JIPipeDesktopMemoryStatusUI - Class in org.hkijena.jipipe.desktop.commons.components

Shows the current memory consumption

JIPipeDesktopMemoryStatusUI() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMemoryStatusUI

Creates a new instance

JIPipeDesktopMenuExtension - Class in org.hkijena.jipipe.desktop.api

An extension for the extension builder or analysis tool menu.

JIPipeDesktopMenuExtension(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.api.JIPipeDesktopMenuExtension

Creates a new instance

JIPipeDesktopMergedDataSlotTableColumnHeaderRenderer - Class in org.hkijena.jipipe.desktop.app.resultanalysis.renderers

Renders the column header in merged JIPipeDataTableInfo instances

JIPipeDesktopMergedDataSlotTableColumnHeaderRenderer(JIPipeMergedDataTableInfo) - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopMergedDataSlotTableColumnHeaderRenderer

JIPipeDesktopMergedProjectSettings - Class in org.hkijena.jipipe.desktop.app.settings.project

JIPipeDesktopMergedProjectSettings(JIPipeProject) - Constructor for class org.hkijena.jipipe.desktop.app.settings.project.JIPipeDesktopMergedProjectSettings

JIPipeDesktopMergedProjectSettingsUserDirectories - Class in org.hkijena.jipipe.desktop.app.settings.project

JIPipeDesktopMergedProjectSettingsUserDirectories(JIPipeProject) - Constructor for class org.hkijena.jipipe.desktop.app.settings.project.JIPipeDesktopMergedProjectSettingsUserDirectories

JIPipeDesktopMergedResultDataSlotTableUI - Class in org.hkijena.jipipe.desktop.app.resultanalysis

Displays the result of multiple JIPipeDataSlot

JIPipeDesktopMergedResultDataSlotTableUI(JIPipeDesktopProjectWorkbench, JIPipeProject, Path, List<JIPipeDataSlot>) - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopMergedResultDataSlotTableUI

JIPipeDesktopMessagePanel - Class in org.hkijena.jipipe.desktop.commons.components

Panel that carries multiple user-friendly messages

JIPipeDesktopMessagePanel() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMessagePanel

JIPipeDesktopMessagePanel.Message - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopMessagePanel.MessageType - Enum in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopModernMetalTheme - Class in org.hkijena.jipipe.desktop.commons.theme

JIPipeDesktopModernMetalTheme() - Constructor for class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

Creates an instance of OceanTheme

JIPipeDesktopModernSliderUI - Class in org.hkijena.jipipe.desktop.commons.theme

JIPipeDesktopModernSliderUI(JSlider) - Constructor for class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernSliderUI

JIPipeDesktopModernSpinnerUI - Class in org.hkijena.jipipe.desktop.commons.theme

JIPipeDesktopModernSpinnerUI() - Constructor for class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernSpinnerUI

JIPipeDesktopMultiAlgorithmCacheBrowserUI - Class in org.hkijena.jipipe.desktop.app.cache

Can display the caches of multiple algorithms

JIPipeDesktopMultiAlgorithmCacheBrowserUI(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopMultiAlgorithmCacheBrowserUI

JIPipeDesktopMultiSelectionModel - Class in org.hkijena.jipipe.desktop.commons.components

Selection model for multiple selections

JIPipeDesktopMultiSelectionModel() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMultiSelectionModel

JIPipeDesktopNodeDatabaseEntryListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.renderers

Renderer for JIPipeNodeDatabaseEntry (supports only non-existing nodes fully)

JIPipeDesktopNodeDatabaseEntryListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopNodeDatabaseEntryListCellRenderer

Creates a new renderer

JIPipeDesktopNodeExamplesUI - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.properties

JIPipeDesktopNodeExamplesUI(JIPipeDesktopProjectWorkbench, JIPipeAlgorithm, JIPipeDesktopDockPanel) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.properties.JIPipeDesktopNodeExamplesUI

JIPipeDesktopNodeFinderDatasetListCellRenderer - Class in org.hkijena.jipipe.desktop.app.grapheditor.nodefinder

JIPipeDesktopNodeFinderDatasetListCellRenderer(JIPipeDesktopNodeFinderDialogUI) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.nodefinder.JIPipeDesktopNodeFinderDatasetListCellRenderer

JIPipeDesktopNodeFinderDialogUI - Class in org.hkijena.jipipe.desktop.app.grapheditor.nodefinder

JIPipeDesktopNodeFinderDialogUI(JIPipeDesktopGraphCanvasUI, JIPipeDataSlot) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.nodefinder.JIPipeDesktopNodeFinderDialogUI

JIPipeDesktopNodeFinderDialogUI.ReloadListRun - Class in org.hkijena.jipipe.desktop.app.grapheditor.nodefinder

JIPipeDesktopNodeGroupUI - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.groups

Editor for a JIPipeNodeGroup Contains a JIPipeDesktopPipelineGraphEditorUI instance that allows editing the compartment's content

JIPipeDesktopNodeGroupUI(JIPipeDesktopWorkbench, JIPipeNodeGroup) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.groups.JIPipeDesktopNodeGroupUI

Creates a new editor

JIPipeDesktopNodeInfoPicker - Class in org.hkijena.jipipe.desktop.commons.components.pickers

Panel that allows to pick JIPipeNodeInfo

JIPipeDesktopNodeInfoPicker(JIPipeDesktopNodeInfoPicker.Mode, Set<JIPipeNodeInfo>) - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker

JIPipeDesktopNodeInfoPicker.Mode - Enum in org.hkijena.jipipe.desktop.commons.components.pickers

The mode of the picker

JIPipeDesktopNodeInfoPicker.NodeInfoDeselectedEvent - Class in org.hkijena.jipipe.desktop.commons.components.pickers

Generated when a node is deselected

JIPipeDesktopNodeInfoPicker.NodeInfoDeselectedEventEmitter - Class in org.hkijena.jipipe.desktop.commons.components.pickers

JIPipeDesktopNodeInfoPicker.NodeInfoDeselectedEventListener - Interface in org.hkijena.jipipe.desktop.commons.components.pickers

JIPipeDesktopNodeInfoPicker.NodeInfoSelectedEvent - Class in org.hkijena.jipipe.desktop.commons.components.pickers

Generated when a node is selected

JIPipeDesktopNodeInfoPicker.NodeInfoSelectedEventEmitter - Class in org.hkijena.jipipe.desktop.commons.components.pickers

JIPipeDesktopNodeInfoPicker.NodeInfoSelectedEventListener - Interface in org.hkijena.jipipe.desktop.commons.components.pickers

JIPipeDesktopNodeInfoPicker.Renderer - Class in org.hkijena.jipipe.desktop.commons.components.pickers

Renders the entries

JIPipeDesktopNodeInfoPicker.SelectedInfosChangedEvent - Class in org.hkijena.jipipe.desktop.commons.components.pickers

Generated when a node is selected

JIPipeDesktopNodeInfoPicker.SelectedInfosChangedEventEmitter - Class in org.hkijena.jipipe.desktop.commons.components.pickers

JIPipeDesktopNodeInfoPicker.SelectedInfosChangedEventListener - Interface in org.hkijena.jipipe.desktop.commons.components.pickers

JIPipeDesktopNodeQuickAction - Class in org.hkijena.jipipe.desktop.api.nodes

JIPipeDesktopNodeQuickAction(String, String, String, String, String, BiConsumer<JIPipeGraphNode, JIPipeDesktopGraphCanvasUI>) - Constructor for class org.hkijena.jipipe.desktop.api.nodes.JIPipeDesktopNodeQuickAction

JIPipeDesktopNodeTableCellRenderer - Class in org.hkijena.jipipe.desktop.app.resultanalysis.renderers

Renders JIPipeGraphNode instances in a table cell

JIPipeDesktopNodeTableCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopNodeTableCellRenderer

Creates a new renderer

JIPipeDesktopNodeUIAction - Interface in org.hkijena.jipipe.desktop.app.grapheditor.commons.actions

JIPipeDesktopNotificationButton - Class in org.hkijena.jipipe.desktop.commons.notifications

UI that monitors the queue

JIPipeDesktopNotificationButton(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.commons.notifications.JIPipeDesktopNotificationButton

JIPipeDesktopOpenContextMenuAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.actions

JIPipeDesktopOpenContextMenuAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.actions.JIPipeDesktopOpenContextMenuAction

JIPipeDesktopOpenTableFromImageJDialogUI - Class in org.hkijena.jipipe.desktop.app.tableeditor

UI that merges tables

JIPipeDesktopOpenTableFromImageJDialogUI(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopOpenTableFromImageJDialogUI

JIPipeDesktopParameterAccessTreeUI - Class in org.hkijena.jipipe.desktop.commons.components

Displays the contents of JIPipeParameterTree.

JIPipeDesktopParameterAccessTreeUI() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterAccessTreeUI

Creates a new empty instance

JIPipeDesktopParameterAccessTreeUI(JIPipeParameterTree) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterAccessTreeUI

Creates a new instance

JIPipeDesktopParameterAccessTreeUI.Renderer - Class in org.hkijena.jipipe.desktop.commons.components

Renders the entries

JIPipeDesktopParameterEditorUI - Class in org.hkijena.jipipe.desktop.api

A UI for a parameter type

JIPipeDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

JIPipeDesktopParameterEditorUI.InitializationParameters - Class in org.hkijena.jipipe.desktop.api

JIPipeDesktopParameterExplorerWindow - Class in org.hkijena.jipipe.desktop.commons.components.parameters

JIPipeDesktopParameterExplorerWindow(JIPipeDesktopWorkbench, JIPipeParameterCollection) - Constructor for class org.hkijena.jipipe.desktop.commons.components.parameters.JIPipeDesktopParameterExplorerWindow

JIPipeDesktopParameterFormPanel - Class in org.hkijena.jipipe.desktop.commons.components

UI around a JIPipeParameterCollection

JIPipeDesktopParameterFormPanel(JIPipeDesktopWorkbench, JIPipeParameterCollection, JIPipeParameterTree, MarkdownText, int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

JIPipeDesktopParameterFormPanel(JIPipeDesktopWorkbench, JIPipeParameterCollection, MarkdownText, int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

JIPipeDesktopParameterKeyPickerUI - Class in org.hkijena.jipipe.desktop.commons.components

Displays available parameters of existing or available nodes and allows to pick the parameter keys

JIPipeDesktopParameterKeyPickerUI() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterKeyPickerUI

Creates a new empty instance

JIPipeDesktopParameterKeyPickerUI.NodeListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopParameterKeyPickerUI.ParameterEntry - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopParameterKeyPickerUI.ParameterTreeCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components

Renders the entries

JIPipeDesktopParameterReferenceGroupCollectionTreeCellRenderer - Class in org.hkijena.jipipe.desktop.app.parameterreference

Renders an JIPipeDataSlot in a JTree

JIPipeDesktopParameterReferenceGroupCollectionTreeCellRenderer(JIPipeDesktopGraphNodeParameterReferenceGroupCollectionEditorUI) - Constructor for class org.hkijena.jipipe.desktop.app.parameterreference.JIPipeDesktopParameterReferenceGroupCollectionTreeCellRenderer

Creates a new renderer

JIPipeDesktopParameterTypeInfoPicker - Class in org.hkijena.jipipe.desktop.commons.components.pickers

Panel that allows to pick JIPipeNodeInfo

JIPipeDesktopParameterTypeInfoPicker(Window) - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopParameterTypeInfoPicker

JIPipeDesktopParameterTypeInfoPicker(Window, Set<Class<?>>) - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopParameterTypeInfoPicker

JIPipeDesktopPathEditorComponent - Class in org.hkijena.jipipe.desktop.commons.components

Text field with a file selection

JIPipeDesktopPathEditorComponent(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPathEditorComponent

Creates a new file selection that opens a file

JIPipeDesktopPathEditorComponent(JIPipeDesktopWorkbench, PathIOMode, PathType) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPathEditorComponent

JIPipeDesktopPathListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.renderers

JIPipeDesktopPathListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopPathListCellRenderer

JIPipeDesktopPickDynamicEnumValueDialog<T> - Class in org.hkijena.jipipe.desktop.commons.components

UI that adds slots to an algorithm

JIPipeDesktopPickDynamicEnumValueDialog(Window, DynamicEnumParameter<T>, T) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPickDynamicEnumValueDialog

JIPipeDesktopPickEnumValueDialog - Class in org.hkijena.jipipe.desktop.commons.components

UI that adds slots to an algorithm

JIPipeDesktopPickEnumValueDialog(Window, List<?>, EnumItemInfo, Object) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPickEnumValueDialog

JIPipeDesktopPickerDialog<T> - Class in org.hkijena.jipipe.desktop.commons.components.pickers

UI for picking a set of values

JIPipeDesktopPickerDialog(Window) - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopPickerDialog

JIPipeDesktopPickNodeDialog - Class in org.hkijena.jipipe.desktop.commons.components.pickers

UI that adds slots to an algorithm

JIPipeDesktopPickNodeDialog(Window, Set<JIPipeGraphNode>, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopPickNodeDialog

JIPipeDesktopPipelineGraphEditorRunManager - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.actions

JIPipeDesktopPipelineGraphEditorRunManager(JIPipeProject, JIPipeDesktopGraphCanvasUI, JIPipeDesktopGraphNodeUI, JIPipeDesktopDockPanel, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.actions.JIPipeDesktopPipelineGraphEditorRunManager

JIPipeDesktopPipelineGraphEditorUI - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline

Editor for a project graph compartment

JIPipeDesktopPipelineGraphEditorUI(JIPipeDesktopWorkbench, JIPipeGraph, UUID) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.JIPipeDesktopPipelineGraphEditorUI

Creates a project graph compartment editor

JIPipeDesktopPipelineParametersPanel - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.properties

JIPipeDesktopPipelineParametersPanel(JIPipeDesktopWorkbench, JIPipeDesktopGraphCanvasUI, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.properties.JIPipeDesktopPipelineParametersPanel

JIPipeDesktopPipelineQuickGuidePanel - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.properties

JIPipeDesktopPipelineQuickGuidePanel(JIPipeDesktopWorkbench, JIPipeDesktopPipelineGraphEditorUI) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.properties.JIPipeDesktopPipelineQuickGuidePanel

JIPipeDesktopPlotAvailableDataManagerUI - Class in org.hkijena.jipipe.desktop.app.ploteditor

Manages available data sets of a plot builder

JIPipeDesktopPlotAvailableDataManagerUI(JIPipeDesktopWorkbench, JFreeChartPlotEditor) - Constructor for class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotAvailableDataManagerUI

JIPipeDesktopPlotDataSeriesColumnListCellRenderer - Class in org.hkijena.jipipe.desktop.app.ploteditor

Renders entries

JIPipeDesktopPlotDataSeriesColumnListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotDataSeriesColumnListCellRenderer

Creates a new renderer

JIPipeDesktopPlotDisplayComponent - Class in org.hkijena.jipipe.desktop.commons.components

Displays a plot

JIPipeDesktopPlotDisplayComponent(JFreeChartPlotEditor) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPlotDisplayComponent

Creates a new instance

JIPipeDesktopPlotExporterDialog - Class in org.hkijena.jipipe.desktop.commons.components

Dialog that exports plots as image

JIPipeDesktopPlotExporterDialog(JFreeChart) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPlotExporterDialog

JIPipeDesktopPlotSeriesEditor - Class in org.hkijena.jipipe.desktop.app.ploteditor

Constructs a series from a set of columns

JIPipeDesktopPlotSeriesEditor(JFreeChartPlotEditor, JIPipeDataInfo) - Constructor for class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotSeriesEditor

Creates a new instance

JIPipeDesktopPlotSeriesEditorUI - Class in org.hkijena.jipipe.desktop.app.ploteditor

UI for JIPipeDesktopPlotSeriesEditor

JIPipeDesktopPlotSeriesEditorUI(JIPipeDesktopWorkbench, JIPipeDesktopPlotSeriesEditor) - Constructor for class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotSeriesEditorUI

JIPipeDesktopPluginManagerUI - Class in org.hkijena.jipipe.desktop.app.plugins.pluginsmanager

JIPipeDesktopPluginManagerUI(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.plugins.pluginsmanager.JIPipeDesktopPluginManagerUI

JIPipeDesktopPluginManagerUI.PluginEntry - Class in org.hkijena.jipipe.desktop.app.plugins.pluginsmanager

JIPipeDesktopPluginManagerUI.PluginEntryListCellRenderer - Class in org.hkijena.jipipe.desktop.app.plugins.pluginsmanager

JIPipeDesktopPluginValidityCheckerPanel - Class in org.hkijena.jipipe.desktop.app.plugins

Panel that checks plugin validity

JIPipeDesktopPluginValidityCheckerPanel(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.plugins.JIPipeDesktopPluginValidityCheckerPanel

JIPipeDesktopPrefixedIconListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.renderers

Renders entries in JIPipeDesktopIconPickerDialog

JIPipeDesktopPrefixedIconListCellRenderer(String) - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopPrefixedIconListCellRenderer

JIPipeDesktopProjectCompartmentTableCellRenderer - Class in org.hkijena.jipipe.desktop.app.resultanalysis.renderers

Renders an JIPipeProjectCompartment cell

JIPipeDesktopProjectCompartmentTableCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopProjectCompartmentTableCellRenderer

JIPipeDesktopProjectOutputTreePanel - Class in org.hkijena.jipipe.desktop.commons.components

Displays a tree where the user can select data slots

JIPipeDesktopProjectOutputTreePanel(JIPipeProject) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopProjectOutputTreePanel

JIPipeDesktopProjectOverviewRunManager - Class in org.hkijena.jipipe.desktop.app.settings.project

JIPipeDesktopProjectOverviewRunManager(JIPipeProject, JIPipeDesktopDockPanel, JIPipeDesktopProjectOverviewUI, List<JIPipeAlgorithm>, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.settings.project.JIPipeDesktopProjectOverviewRunManager

JIPipeDesktopProjectOverviewUI - Class in org.hkijena.jipipe.desktop.app.settings

UI that gives an overview of a pipeline (shows parameters, etc.)

JIPipeDesktopProjectOverviewUI(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectOverviewUI

Creates a new instance

JIPipeDesktopProjectReportUI - Class in org.hkijena.jipipe.desktop.app

JIPipeDesktopProjectReportUI(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI

JIPipeDesktopProjectReportUI.RebuildReportRun - Class in org.hkijena.jipipe.desktop.app

JIPipeDesktopProjectReportUI.ReportSettings - Class in org.hkijena.jipipe.desktop.app

JIPipeDesktopProjectSettingsUI - Class in org.hkijena.jipipe.desktop.app.settings

Provides components for the project settings.

JIPipeDesktopProjectSettingsUI(JIPipeProject, JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI

Creates a new instance

JIPipeDesktopProjectSettingsUI.ProjectDirectoriesSettingsSheetWrapper - Class in org.hkijena.jipipe.desktop.app.settings

JIPipeDesktopProjectSettingsUI.ProjectMetadataSettingsSheetWrapper - Class in org.hkijena.jipipe.desktop.app.settings

JIPipeDesktopProjectSettingsUI.ProjectParametersSettingsSheetWrapper - Class in org.hkijena.jipipe.desktop.app.settings

JIPipeDesktopProjectSettingsUI.ProjectPermissionsSettingsSheetWrapper - Class in org.hkijena.jipipe.desktop.app.settings

JIPipeDesktopProjectSettingsUI.SettingsSheetWrapper - Class in org.hkijena.jipipe.desktop.app.settings

JIPipeDesktopProjectTemplateDownloaderPackage - Class in org.hkijena.jipipe.desktop.app.project.templatedownloader

JIPipeDesktopProjectTemplateDownloaderPackage() - Constructor for class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderPackage

JIPipeDesktopProjectTemplateDownloaderRepository - Class in org.hkijena.jipipe.desktop.app.project.templatedownloader

JIPipeDesktopProjectTemplateDownloaderRepository() - Constructor for class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderRepository

JIPipeDesktopProjectTemplateDownloaderRun - Class in org.hkijena.jipipe.desktop.app.project.templatedownloader

JIPipeDesktopProjectTemplateDownloaderRun(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderRun

JIPipeDesktopProjectTemplateDownloaderUI - Class in org.hkijena.jipipe.desktop.app.project.templatedownloader

JIPipeDesktopProjectTemplateDownloaderUI(JIPipeDesktopProjectTemplateDownloaderRun) - Constructor for class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderUI

JIPipeDesktopProjectWindow - Class in org.hkijena.jipipe.desktop.app

Window that holds an JIPipeDesktopProjectWorkbench instance

JIPipeDesktopProjectWindow(Context, JIPipeProject, boolean, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

JIPipeDesktopProjectWorkbench - Class in org.hkijena.jipipe.desktop.app

UI around an JIPipeProject

JIPipeDesktopProjectWorkbench(JIPipeDesktopProjectWindow, Context, JIPipeProject, boolean, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

JIPipeDesktopProjectWorkbenchAccess - Interface in org.hkijena.jipipe.desktop.app

Panel that holds a reference to JIPipeDesktopProjectWorkbench

JIPipeDesktopProjectWorkbenchPanel - Class in org.hkijena.jipipe.desktop.app

A JPanel that implements JIPipeDesktopProjectWorkbenchAccess

JIPipeDesktopProjectWorkbenchPanel(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbenchPanel

JIPipeDesktopQuickRun - Class in org.hkijena.jipipe.desktop.app.quickrun

Allows to test one algorithm with multiple parameters

JIPipeDesktopQuickRun(JIPipeProject, List<JIPipeGraphNode>, JIPipeDesktopQuickRunSettings) - Constructor for class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRun

JIPipeDesktopQuickRun(JIPipeProject, JIPipeGraphNode, JIPipeDesktopQuickRunSettings) - Constructor for class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRun

JIPipeDesktopQuickRunSettings - Class in org.hkijena.jipipe.desktop.app.quickrun

Settings for JIPipeDesktopQuickRun

JIPipeDesktopQuickRunSettings(JIPipeProject) - Constructor for class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRunSettings

Creates a new instance

JIPipeDesktopReadonlyCopyableTextField - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopReadonlyCopyableTextField(String, boolean) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopReadonlyCopyableTextField

JIPipeDesktopRecentProjectListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components

Renders a recent project

JIPipeDesktopRecentProjectListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopRecentProjectListCellRenderer

JIPipeDesktopRecentProjectsListPanel - Class in org.hkijena.jipipe.desktop.app.documentation

JIPipeDesktopRecentProjectsListPanel(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopRecentProjectsListPanel

JIPipeDesktopRecentProjectsListPanel.ProjectOpenedEvent - Class in org.hkijena.jipipe.desktop.app.documentation

JIPipeDesktopRecentProjectsListPanel.ProjectOpenedEventEmitter - Class in org.hkijena.jipipe.desktop.app.documentation

JIPipeDesktopRecentProjectsListPanel.ProjectOpenedEventListener - Interface in org.hkijena.jipipe.desktop.app.documentation

JIPipeDesktopRecentProjectsMenu - Class in org.hkijena.jipipe.desktop.commons.components

Menu that displays recently opened JIPipeProject

JIPipeDesktopRecentProjectsMenu(String, Icon, JIPipeDesktopProjectWindow) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopRecentProjectsMenu

JIPipeDesktopRectangularLine - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.connections

Contains coordinates of a line that is rectangular This abstracts away x and y for horizontal and vertical implementations

JIPipeDesktopRectangularLine(int, int, int, int) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.connections.JIPipeDesktopRectangularLine

JIPipeDesktopReloadableValidityChecker - Class in org.hkijena.jipipe.desktop.commons.components

Panel that encapsulates a JIPipeDesktopValidityReportUI and an JIPipeValidatable.

JIPipeDesktopReloadableValidityChecker(JIPipeDesktopWorkbench, JIPipeValidatable) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopReloadableValidityChecker

JIPipeDesktopReloadableValidityChecker(JIPipeDesktopWorkbench, JIPipeValidatable, MarkdownText) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopReloadableValidityChecker

JIPipeDesktopResultAlgorithmTree - Class in org.hkijena.jipipe.desktop.app.resultanalysis

Displays a tree where the user can select data slots

JIPipeDesktopResultAlgorithmTree(JIPipeDesktopProjectWorkbench, JIPipeProject, Path) - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultAlgorithmTree

JIPipeDesktopResultDataSlotPreview - Class in org.hkijena.jipipe.desktop.app.resultanalysis

Renders a JIPipeDataSlot row as table cell.

JIPipeDesktopResultDataSlotPreview(JIPipeDesktopProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableRowInfo, JIPipeDataAnnotationInfo) - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotPreview

Creates a new renderer

JIPipeDesktopResultDataSlotRowUI - Class in org.hkijena.jipipe.desktop.app.resultanalysis

A UI that contains various actions for importing/processing output data Please note that the data is not present in the data slot anymore at this point, but instead stored in output files.

JIPipeDesktopResultDataSlotRowUI(JIPipeDesktopProjectWorkbench, JIPipeDataSlot, JIPipeDataTableRowInfo) - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotRowUI

JIPipeDesktopResultDataSlotTableUI - Class in org.hkijena.jipipe.desktop.app.resultanalysis

UI that displays the JIPipeDataTableInfo of an JIPipeDataSlot

JIPipeDesktopResultDataSlotTableUI(JIPipeDesktopProjectWorkbench, JIPipeProject, Path, JIPipeDataSlot) - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotTableUI

JIPipeDesktopResultsTableDataListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.renderers

Renders ResultsTableData

JIPipeDesktopResultsTableDataListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopResultsTableDataListCellRenderer

JIPipeDesktopResultTreeCellRenderer - Class in org.hkijena.jipipe.desktop.app.resultanalysis.renderers

Renders the tree in JIPipeDesktopResultAlgorithmTree

JIPipeDesktopResultTreeCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopResultTreeCellRenderer

Creates new renderer

JIPipeDesktopResultUI - Class in org.hkijena.jipipe.desktop.app.resultanalysis

UI around an JIPipeGraphRun result

JIPipeDesktopResultUI(JIPipeDesktopProjectWorkbench, JIPipeProject, Path) - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultUI

JIPipeDesktopRewireConnectionsToolUI - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui

JIPipeDesktopRewireConnectionsToolUI(JIPipeDesktopGraphCanvasUI, JIPipeDataSlot, Set<JIPipeDataSlot>) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopRewireConnectionsToolUI

JIPipeDesktopRibbon - Class in org.hkijena.jipipe.desktop.commons.components.ribbon

A simple Ribbon-style panel

JIPipeDesktopRibbon(JIPipeDesktopRibbon.Task...) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon

JIPipeDesktopRibbon(int, JIPipeDesktopRibbon.Task...) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon

JIPipeDesktopRibbon.Action - Class in org.hkijena.jipipe.desktop.commons.components.ribbon

An action within the ribbon

JIPipeDesktopRibbon.Band - Class in org.hkijena.jipipe.desktop.commons.components.ribbon

Secondary organization within one task Creates a label at the bottom of the current tak tab Separated from other bands via a separator line

JIPipeDesktopRibbon.Task - Class in org.hkijena.jipipe.desktop.commons.components.ribbon

The highest-order organization of a ribbon.

JIPipeDesktopRoundedButtonUI - Class in org.hkijena.jipipe.desktop.commons.theme

JIPipeDesktopRoundedButtonUI(int, Color, Color) - Constructor for class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopRoundedButtonUI

JIPipeDesktopRowDataAnnotationMergedTableCellRenderer - Class in org.hkijena.jipipe.desktop.app.resultanalysis.renderers

Renders data in JIPipeMergedDataTableInfo

JIPipeDesktopRowDataAnnotationMergedTableCellRenderer(JIPipeDesktopProjectWorkbench, JIPipeMergedDataTableInfo, JScrollPane, JTable) - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopRowDataAnnotationMergedTableCellRenderer

JIPipeDesktopRowDataAnnotationTableCellRenderer - Class in org.hkijena.jipipe.desktop.app.resultanalysis.renderers

Renders row data of an JIPipeDataTableInfo

JIPipeDesktopRowDataAnnotationTableCellRenderer(JIPipeDesktopProjectWorkbench, JIPipeDataSlot, JTable, JScrollPane) - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopRowDataAnnotationTableCellRenderer

JIPipeDesktopRowDataMergedTableCellRenderer - Class in org.hkijena.jipipe.desktop.app.resultanalysis.renderers

Renders data in JIPipeMergedDataTableInfo

JIPipeDesktopRowDataMergedTableCellRenderer(JIPipeDesktopProjectWorkbench, JIPipeMergedDataTableInfo, JScrollPane, JTable) - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopRowDataMergedTableCellRenderer

JIPipeDesktopRowDataTableCellRenderer - Class in org.hkijena.jipipe.desktop.app.resultanalysis.renderers

Renders row data of an JIPipeDataTableInfo

JIPipeDesktopRowDataTableCellRenderer(JIPipeDesktopProjectWorkbench, JIPipeDataSlot, JTable, JScrollPane) - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopRowDataTableCellRenderer

JIPipeDesktopRowIndexTableCellRenderer - Class in org.hkijena.jipipe.desktop.app.resultanalysis.renderers

Renders the location of of JIPipeDataTableInfo and JIPipeMergedDataTableInfo

JIPipeDesktopRowIndexTableCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopRowIndexTableCellRenderer

Creates new renderer

JIPipeDesktopRSyntaxTextField - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopRSyntaxTextField() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopRSyntaxTextField

JIPipeDesktopRSyntaxTextField(RSyntaxDocument) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopRSyntaxTextField

JIPipeDesktopRSyntaxTextField(String) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopRSyntaxTextField

JIPipeDesktopRSyntaxTextField(int, int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopRSyntaxTextField

JIPipeDesktopRSyntaxTextField(String, int, int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopRSyntaxTextField

JIPipeDesktopRSyntaxTextField(RSyntaxDocument, String, int, int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopRSyntaxTextField

JIPipeDesktopRSyntaxTextField(int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopRSyntaxTextField

JIPipeDesktopRunAndShowResultsAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.actions

JIPipeDesktopRunAndShowResultsAction(boolean) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.actions.JIPipeDesktopRunAndShowResultsAction

JIPipeDesktopRunExecuteUI - Class in org.hkijena.jipipe.desktop.app.running

UI that executes an JIPipeRunnable and shows the progress in a dialog

JIPipeDesktopRunExecuteUI(JIPipeDesktopWorkbench, JIPipeRunnable) - Constructor for class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunExecuteUI

JIPipeDesktopRunExecuteUI(JIPipeDesktopWorkbench, JIPipeRunnable, JIPipeRunnableQueue) - Constructor for class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunExecuteUI

JIPipeDesktopRunnableLogsButton - Class in org.hkijena.jipipe.desktop.app.running.logs

JIPipeDesktopRunnableLogsButton(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsButton

JIPipeDesktopRunnableLogsCollection - Class in org.hkijena.jipipe.desktop.app.running.logs

JIPipeDesktopRunnableLogsCollection() - Constructor for class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection

JIPipeDesktopRunnableLogsCollection.LogClearedEvent - Class in org.hkijena.jipipe.desktop.app.running.logs

JIPipeDesktopRunnableLogsCollection.LogClearedEventEmitter - Class in org.hkijena.jipipe.desktop.app.running.logs

JIPipeDesktopRunnableLogsCollection.LogClearedEventListener - Interface in org.hkijena.jipipe.desktop.app.running.logs

JIPipeDesktopRunnableLogsCollection.LogEntryAddedEvent - Class in org.hkijena.jipipe.desktop.app.running.logs

JIPipeDesktopRunnableLogsCollection.LogEntryAddedEventEmitter - Class in org.hkijena.jipipe.desktop.app.running.logs

JIPipeDesktopRunnableLogsCollection.LogEntryAddedEventListener - Interface in org.hkijena.jipipe.desktop.app.running.logs

JIPipeDesktopRunnableLogsCollection.LogUpdatedEvent - Class in org.hkijena.jipipe.desktop.app.running.logs

JIPipeDesktopRunnableLogsCollection.LogUpdatedEventEmitter - Class in org.hkijena.jipipe.desktop.app.running.logs

JIPipeDesktopRunnableLogsCollection.LogUpdatedEventListener - Interface in org.hkijena.jipipe.desktop.app.running.logs

JIPipeDesktopRunnableQueueButton - Class in org.hkijena.jipipe.desktop.app.running.queue

UI that monitors the queue

JIPipeDesktopRunnableQueueButton(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

JIPipeDesktopRunnableQueueButton(JIPipeDesktopWorkbench, JIPipeRunnableQueue) - Constructor for class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

JIPipeDesktopRunnableQueueButtonMenuItem - Class in org.hkijena.jipipe.desktop.app.running.queue

JIPipeDesktopRunnableQueueButtonMenuItem(JIPipeRunnableQueue, JIPipeRunnableWorker) - Constructor for class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButtonMenuItem

JIPipeDesktopRunnableQueueNotifier - Class in org.hkijena.jipipe.desktop.app.running.queue

Generates notifications based on the the runner

JIPipeDesktopRunnableQueuePanelUI - Class in org.hkijena.jipipe.desktop.app.running.queue

UI that executes an JIPipeRunnable

JIPipeDesktopRunnableQueuePanelUI() - Constructor for class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueuePanelUI

JIPipeDesktopRunnableQueueSpinnerIcon - Class in org.hkijena.jipipe.desktop.commons.components.icons

JIPipeDesktopRunnableQueueSpinnerIcon(Component) - Constructor for class org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopRunnableQueueSpinnerIcon

JIPipeDesktopRunnableQueueSpinnerIcon(Component, JIPipeRunnableQueue) - Constructor for class org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopRunnableQueueSpinnerIcon

JIPipeDesktopRunNextWindow - Class in org.hkijena.jipipe.desktop.app.running

Next-generation run dialog

JIPipeDesktopRunNextWindow(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunNextWindow

JIPipeDesktopRunNextWindow.RunOptionListCellRenderer - Class in org.hkijena.jipipe.desktop.app.running

JIPipeDesktopRunNextWindow.StartPageStorageMode - Enum in org.hkijena.jipipe.desktop.app.running

JIPipeDesktopRunSetListCellRenderer - Class in org.hkijena.jipipe.desktop.app.settings

JIPipeDesktopRunSetListCellRenderer(JIPipeProject, JIPipeProjectRunSetsConfiguration) - Constructor for class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopRunSetListCellRenderer

JIPipeDesktopRunSetsListEditor - Class in org.hkijena.jipipe.desktop.app.settings

JIPipeDesktopRunSetsListEditor(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopRunSetsListEditor

JIPipeDesktopRunSingleAlgorithmSettingsPanel - Class in org.hkijena.jipipe.desktop.app.compat

JIPipeDesktopRunSingleAlgorithmSettingsPanel(JIPipeDesktopWorkbench, JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmSettingsPanel

JIPipeDesktopRunSingleAlgorithmSettingsPanelIOEditor - Class in org.hkijena.jipipe.desktop.app.compat

JIPipeDesktopRunSingleAlgorithmSettingsPanelIOEditor(JIPipeDesktopRunSingleAlgorithmSettingsPanel) - Constructor for class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmSettingsPanelIOEditor

JIPipeDesktopRunSingleAlgorithmSettingsPanelIOEditorInputUI - Class in org.hkijena.jipipe.desktop.app.compat

JIPipeDesktopRunSingleAlgorithmSettingsPanelIOEditorInputUI(JIPipeDesktopRunSingleAlgorithmSettingsPanelIOEditor, String) - Constructor for class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmSettingsPanelIOEditorInputUI

JIPipeDesktopRunSingleAlgorithmSettingsPanelIOEditorOutputUI - Class in org.hkijena.jipipe.desktop.app.compat

JIPipeDesktopRunSingleAlgorithmSettingsPanelIOEditorOutputUI(JIPipeDesktopRunSingleAlgorithmSettingsPanelIOEditor, String) - Constructor for class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmSettingsPanelIOEditorOutputUI

JIPipeDesktopRunSingleAlgorithmWindow - Class in org.hkijena.jipipe.desktop.app.compat

UI for SingleImageJAlgorithmRunConfiguration

JIPipeDesktopRunSingleAlgorithmWindow(Context) - Constructor for class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

JIPipeDesktopRunSingleAlgorithmWindow(Context, JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

JIPipeDesktopRunSingleAlgorithmWindow(Context, Class<? extends JIPipeGraphNode>) - Constructor for class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

JIPipeDesktopRuntimePartitionListCellRenderer - Class in org.hkijena.jipipe.desktop.app.settings

JIPipeDesktopRuntimePartitionListCellRenderer(JIPipeRuntimePartitionConfiguration) - Constructor for class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopRuntimePartitionListCellRenderer

JIPipeDesktopRuntimePartitionListEditor - Class in org.hkijena.jipipe.desktop.app.settings

JIPipeDesktopRuntimePartitionListEditor(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopRuntimePartitionListEditor

JIPipeDesktopSaveProjectAndCacheToDirectoryRun - Class in org.hkijena.jipipe.desktop.app.project

JIPipeDesktopSaveProjectAndCacheToDirectoryRun(JIPipeDesktopWorkbench, JIPipeProject, Path, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopSaveProjectAndCacheToDirectoryRun

JIPipeDesktopSaveProjectAndCacheToZipRun - Class in org.hkijena.jipipe.desktop.app.project

JIPipeDesktopSaveProjectAndCacheToZipRun(JIPipeDesktopWorkbench, JIPipeProject, Path) - Constructor for class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopSaveProjectAndCacheToZipRun

JIPipeDesktopSearchTextField - Class in org.hkijena.jipipe.desktop.commons.components.search

A JXTextField designed for searching

JIPipeDesktopSearchTextField() - Constructor for class org.hkijena.jipipe.desktop.commons.components.search.JIPipeDesktopSearchTextField

Creates a new instance

JIPipeDesktopSearchTextFieldTableRowFilter - Class in org.hkijena.jipipe.desktop.commons.components.search

Filters string entries via a JIPipeDesktopSearchTextField

JIPipeDesktopSearchTextFieldTableRowFilter(JIPipeDesktopSearchTextField) - Constructor for class org.hkijena.jipipe.desktop.commons.components.search.JIPipeDesktopSearchTextFieldTableRowFilter

JIPipeDesktopSimpleDataBatchTableModel - Class in org.hkijena.jipipe.desktop.app.datatable

A table model that displays iteration steps

JIPipeDesktopSimpleDataBatchTableModel(JTable, List<JIPipeMultiIterationStep>, Class<? extends Store>) - Constructor for class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableModel

JIPipeDesktopSimpleDataBatchTableUI - Class in org.hkijena.jipipe.desktop.app.datatable

Panel that displays a iteration step table

JIPipeDesktopSimpleDataBatchTableUI(List<JIPipeMultiIterationStep>) - Constructor for class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableUI

JIPipeDesktopSingleSelectionModel - Class in org.hkijena.jipipe.desktop.commons.components

Selection model for single selections

JIPipeDesktopSingleSelectionModel() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopSingleSelectionModel

JIPipeDesktopSmallButtonRibbonAction - Class in org.hkijena.jipipe.desktop.commons.components.ribbon

JIPipeDesktopSmallButtonRibbonAction(String, String, Icon, Runnable) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopSmallButtonRibbonAction

JIPipeDesktopSmallButtonRibbonAction(String, String, Icon, JMenuItem...) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopSmallButtonRibbonAction

JIPipeDesktopSmallToggleButtonRibbonAction - Class in org.hkijena.jipipe.desktop.commons.components.ribbon

JIPipeDesktopSmallToggleButtonRibbonAction(String, String, Icon) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopSmallToggleButtonRibbonAction

JIPipeDesktopSmallToggleButtonRibbonAction(String, String, Icon, boolean, Consumer<JToggleButton>) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopSmallToggleButtonRibbonAction

JIPipeDesktopSplashScreen - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopSplashScreen() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopSplashScreen

JIPipeDesktopSplitPane - Class in org.hkijena.jipipe.utils

A split pane that automatically resizes itself to a ratio

JIPipeDesktopSplitPane(int, double) - Constructor for class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane

JIPipeDesktopSplitPane(int, Component, Component, double) - Constructor for class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane

JIPipeDesktopSplitPane(int, JIPipeDesktopSplitPane.Ratio) - Constructor for class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane

JIPipeDesktopSplitPane(int, Component, Component, JIPipeDesktopSplitPane.Ratio) - Constructor for class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane

JIPipeDesktopSplitPane.CustomSplitPaneUI - Class in org.hkijena.jipipe.utils

JIPipeDesktopSplitPane.DynamicSidebarRatio - Class in org.hkijena.jipipe.utils

A dynamic ratio designed for UIs with a sidebar (defaults to the right) that adapts to the available space Targets a preferred sidebar width

JIPipeDesktopSplitPane.FixedRatio - Class in org.hkijena.jipipe.utils

A fixed ratio

JIPipeDesktopSplitPane.Ratio - Interface in org.hkijena.jipipe.utils

Interface that takes the component width as input and returns the ratio

JIPipeDesktopSplitPane.RatioUpdatedEvent - Class in org.hkijena.jipipe.utils

JIPipeDesktopSplitPane.RatioUpdatedEventEmitter - Class in org.hkijena.jipipe.utils

JIPipeDesktopSplitPane.RatioUpdatedEventListener - Interface in org.hkijena.jipipe.utils

JIPipeDesktopSummarizeTableColumnsDialogUI - Class in org.hkijena.jipipe.desktop.app.tableeditor

UI for summarizing table columns

JIPipeDesktopSummarizeTableColumnsDialogUI(ResultsTableData) - Constructor for class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopSummarizeTableColumnsDialogUI

JIPipeDesktopTableEditor - Class in org.hkijena.jipipe.desktop.app.tableeditor

Spreadsheet UI

JIPipeDesktopTableEditor(JIPipeDesktopWorkbench, ResultsTableData) - Constructor for class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopTableEditor

JIPipeDesktopTableEditor.NumberEditor - Class in org.hkijena.jipipe.desktop.app.tableeditor

JIPipeDesktopTableImporterDialog - Class in org.hkijena.jipipe.desktop.app.tableeditor

Dialog to import a table

JIPipeDesktopTableImporterDialog(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopTableImporterDialog

JIPipeDesktopTabListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.tabs

Renders JIPipeDesktopTabPane tabs

JIPipeDesktopTabListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabListCellRenderer

Creates a new renderer

JIPipeDesktopTabPane - Class in org.hkijena.jipipe.desktop.commons.components.tabs

JTabbedPane with larger tabs, ability to close tabs, singleton tabs that are hidden instead of being closed

JIPipeDesktopTabPane() - Constructor for class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

JIPipeDesktopTabPane(boolean, JIPipeDesktopTabPane.TabPlacement) - Constructor for class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Creates a new instance

JIPipeDesktopTabPane.CloseMode - Enum in org.hkijena.jipipe.desktop.commons.components.tabs

Behavior of the tab close button

JIPipeDesktopTabPane.DocumentTab - Class in org.hkijena.jipipe.desktop.commons.components.tabs

Encapsulates a tab

JIPipeDesktopTabPane.DocumentTabComponent - Class in org.hkijena.jipipe.desktop.commons.components.tabs

JIPipeDesktopTabPane.SingletonTab - Class in org.hkijena.jipipe.desktop.commons.components.tabs

Encapsulates a singleton tab

JIPipeDesktopTabPane.SingletonTabMode - Enum in org.hkijena.jipipe.desktop.commons.components.tabs

JIPipeDesktopTabPane.TabPlacement - Enum in org.hkijena.jipipe.desktop.commons.components.tabs

JIPipeDesktopTabPane.TabRenamedEvent - Class in org.hkijena.jipipe.desktop.commons.components.tabs

JIPipeDesktopTabPane.TabRenamedEventEmitter - Class in org.hkijena.jipipe.desktop.commons.components.tabs

JIPipeDesktopTabPane.TabRenamedEventListener - Interface in org.hkijena.jipipe.desktop.commons.components.tabs

JIPipeDesktopTemplateProjectListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.renderers

Renders a recent project

JIPipeDesktopTemplateProjectListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopTemplateProjectListCellRenderer

JIPipeDesktopToggleButtonPanel<T> - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopToggleButtonPanel() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopToggleButtonPanel

JIPipeDesktopToggleButtonRibbonAction - Class in org.hkijena.jipipe.desktop.commons.components.ribbon

JIPipeDesktopToggleButtonRibbonAction(Component, int, Insets) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopToggleButtonRibbonAction

JIPipeDesktopToggleButtonRibbonAction(List<Component>, int, Insets) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopToggleButtonRibbonAction

JIPipeDesktopUITheme - Enum in org.hkijena.jipipe.desktop.commons.theme

JIPipeDesktopUpdateCacheAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.actions

JIPipeDesktopUpdateCacheAction(boolean, boolean, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.actions.JIPipeDesktopUpdateCacheAction

JIPipeDesktopUserFriendlyErrorUI - Class in org.hkijena.jipipe.desktop.commons.components

Displays exceptions in a user-friendly way.

JIPipeDesktopUserFriendlyErrorUI(JIPipeDesktopWorkbench, MarkdownText, int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopUserFriendlyErrorUI

JIPipeDesktopValidityReportUI - Class in org.hkijena.jipipe.desktop.commons.components

UI for an JIPipeValidationReport

JIPipeDesktopValidityReportUI(JIPipeDesktopWorkbench, boolean) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopValidityReportUI

JIPipeDesktopValidityReportUI(JIPipeDesktopWorkbench, boolean, MarkdownText) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopValidityReportUI

JIPipeDesktopVerticalToolBar - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopVerticalToolBar() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopVerticalToolBar

JIPipeDesktopWelcomePanel - Class in org.hkijena.jipipe.desktop.app.documentation

UI that shows some introduction

JIPipeDesktopWelcomePanel(JIPipeDesktopProjectWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopWelcomePanel

Creates a new instance

JIPipeDesktopWindowListCellRenderer<T extends Frame> - Class in org.hkijena.jipipe.desktop.commons.components.renderers

JIPipeDesktopWindowListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopWindowListCellRenderer

JIPipeDesktopWorkbench - Interface in org.hkijena.jipipe.desktop.app

A user interface that is running on a desktop machine

JIPipeDesktopWorkbenchAccess - Interface in org.hkijena.jipipe.desktop.app

Interface for any class that needs access to a JIPipeDesktopWorkbench

JIPipeDesktopWorkbenchNotificationInboxUI - Class in org.hkijena.jipipe.desktop.commons.notifications

JIPipeDesktopWorkbenchNotificationInboxUI(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.commons.notifications.JIPipeDesktopWorkbenchNotificationInboxUI

JIPipeDesktopWorkbenchNotificationUI - Class in org.hkijena.jipipe.desktop.commons.notifications

JIPipeDesktopWorkbenchNotificationUI(JIPipeDesktopWorkbenchNotificationInboxUI, JIPipeNotification, boolean, boolean) - Constructor for class org.hkijena.jipipe.desktop.commons.notifications.JIPipeDesktopWorkbenchNotificationUI

JIPipeDesktopWorkbenchPanel - Class in org.hkijena.jipipe.desktop.app

A JPanel that implements JIPipeWorkbenchAccess

JIPipeDesktopWorkbenchPanel(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.desktop.app.JIPipeDesktopWorkbenchPanel

JIPipeDesktopWrapLayout - Class in org.hkijena.jipipe.desktop.commons.components.layouts

FlowLayout subclass that fully supports wrapping of components.

JIPipeDesktopWrapLayout() - Constructor for class org.hkijena.jipipe.desktop.commons.components.layouts.JIPipeDesktopWrapLayout

Constructs a new WrapLayout with a left alignment and a default 5-unit horizontal and vertical gap.

JIPipeDesktopWrapLayout(int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.layouts.JIPipeDesktopWrapLayout

Constructs a new FlowLayout with the specified alignment and a default 5-unit horizontal and vertical gap.

JIPipeDesktopWrapLayout(int, int, int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.layouts.JIPipeDesktopWrapLayout

Creates a new flow layout manager with the indicated alignment and the indicated horizontal and vertical gaps.

JIPipeDesktopZoomViewPort - Interface in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopZoomViewPort.ZoomChangedEvent - Class in org.hkijena.jipipe.desktop.commons.components

Triggered by JIPipeDesktopZoomViewPort when the zoom was changed

JIPipeDesktopZoomViewPort.ZoomChangedEventEmitter - Class in org.hkijena.jipipe.desktop.commons.components

JIPipeDesktopZoomViewPort.ZoomChangedEventListener - Interface in org.hkijena.jipipe.desktop.commons.components

JIPipeDocumentation - Class in org.hkijena.jipipe.api

Default implementation of SetJIPipeDocumentation

JIPipeDocumentation(String, String) - Constructor for class org.hkijena.jipipe.api.JIPipeDocumentation

JIPipeDocumentation(String, String, Class<?>) - Constructor for class org.hkijena.jipipe.api.JIPipeDocumentation

JIPipeDownloadsApplicationSettings - Class in org.hkijena.jipipe.plugins.settings

Settings related to downloads

JIPipeDownloadsApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeDownloadsApplicationSettings

Creates a new instance

JIPipeDownloadsApplicationSettings.DownloadEnvironment - Class in org.hkijena.jipipe.plugins.settings

JIPipeDummyGraphHistoryJournal - Class in org.hkijena.jipipe.api.history

JIPipeDummyGraphHistoryJournal() - Constructor for class org.hkijena.jipipe.api.history.JIPipeDummyGraphHistoryJournal

JIPipeDummyParameterCollection - Class in org.hkijena.jipipe.api.parameters

A JIPipeParameterCollection that stores exactly one value (an object) This is used in conjunction with JIPipeManualParameterAccess

JIPipeDummyParameterCollection() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDummyParameterCollection

JIPipeDummyWorkbench - Class in org.hkijena.jipipe.desktop.app

A dummy implementation of JIPipeWorkbench that will trigger no errors, but will not work for various functions.

JIPipeDummyWorkbench() - Constructor for class org.hkijena.jipipe.desktop.app.JIPipeDummyWorkbench

JIPipeDynamicParameterCollection - Class in org.hkijena.jipipe.api.parameters

Holds a user-definable set of parameters

JIPipeDynamicParameterCollection() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

JIPipeDynamicParameterCollection(boolean) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Creates a new instance.

JIPipeDynamicParameterCollection(JIPipeDynamicParameterCollection) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Copies the parameters from the original

JIPipeDynamicParameterCollection(boolean, Set<JIPipeParameterTypeInfo>) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Creates a new instance

JIPipeDynamicParameterCollection(boolean, Class<?>[]) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Creates a new instance

JIPipeDynamicParameterCollection.BeforeAddParameterEvent - Class in org.hkijena.jipipe.api.parameters

JIPipeDynamicParameterCollection.BeforeAddParameterEventEmitter - Class in org.hkijena.jipipe.api.parameters

JIPipeDynamicParameterCollection.BeforeAddParameterEventListener - Interface in org.hkijena.jipipe.api.parameters

JIPipeDynamicParameterCollection.Deserializer - Class in org.hkijena.jipipe.api.parameters

JIPipeDynamicParameterCollection.UserParameterDefinition - Class in org.hkijena.jipipe.api.parameters

Parameter definition by a user

JIPipeEmptyData - Class in org.hkijena.jipipe.api.data

JIPipeEmptyData() - Constructor for class org.hkijena.jipipe.api.data.JIPipeEmptyData

JIPipeEmptyNodeInfo - Class in org.hkijena.jipipe.api.nodes.infos

An empty algorithm info.

JIPipeEmptyNodeInfo() - Constructor for class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo

JIPipeEmptyNodeInfo.Serializer - Class in org.hkijena.jipipe.api.nodes.infos

Serializes the empty algorithm info

JIPipeEmptyThumbnailData - Class in org.hkijena.jipipe.api.data.thumbnails

JIPipeEmptyThumbnailData() - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeEmptyThumbnailData

JIPipeEnvironment - Class in org.hkijena.jipipe.api.environments

Defines an environment

JIPipeEnvironment() - Constructor for class org.hkijena.jipipe.api.environments.JIPipeEnvironment

JIPipeEnvironment(JIPipeEnvironment) - Constructor for class org.hkijena.jipipe.api.environments.JIPipeEnvironment

JIPipeEvent - Interface in org.hkijena.jipipe.api.events

Contains information about an event emitted by JIPipeEventEmitter

JIPipeEventEmitter<Event extends JIPipeEvent,Listener> - Class in org.hkijena.jipipe.api.events

An event emitter

JIPipeEventEmitter() - Constructor for class org.hkijena.jipipe.api.events.JIPipeEventEmitter

JIPipeEventEmitter.LambdaSubscriber<Event extends JIPipeEvent,Listener> - Class in org.hkijena.jipipe.api.events

JIPipeEventEmitter.StrongObjectSubscriber<Event extends JIPipeEvent,Listener> - Class in org.hkijena.jipipe.api.events

JIPipeEventEmitter.Subscriber<Event extends JIPipeEvent,Listener> - Interface in org.hkijena.jipipe.api.events

JIPipeEventEmitter.WeakObjectSubscriber<Event extends JIPipeEvent,Listener> - Class in org.hkijena.jipipe.api.events

JIPipeExportedCompartment - Class in org.hkijena.jipipe.api.compartments

Exported JIPipeProjectCompartment

JIPipeExportedCompartment() - Constructor for class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment

Creates a new instance

JIPipeExportedCompartment(JIPipeProjectCompartment) - Constructor for class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment

Initializes the instance from a compartment

JIPipeExportedCompartment.Deserializer - Class in org.hkijena.jipipe.api.compartments

Deserializes the compartment

JIPipeExportedCompartment.Serializer - Class in org.hkijena.jipipe.api.compartments

Serializes the compartment

JIPipeExpressionCustomASTParser - Class in org.hkijena.jipipe.plugins.expressions

JIPipeExpressionCustomASTParser() - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser

JIPipeExpressionCustomASTParser.ASTNode - Interface in org.hkijena.jipipe.plugins.expressions

JIPipeExpressionCustomASTParser.FunctionNode - Class in org.hkijena.jipipe.plugins.expressions

JIPipeExpressionCustomASTParser.NumberNode - Class in org.hkijena.jipipe.plugins.expressions

JIPipeExpressionCustomASTParser.OperationNode - Class in org.hkijena.jipipe.plugins.expressions

JIPipeExpressionCustomASTParser.Token - Class in org.hkijena.jipipe.plugins.expressions

JIPipeExpressionCustomASTParser.TokenIterator - Class in org.hkijena.jipipe.plugins.expressions

JIPipeExpressionCustomASTParser.TokenType - Enum in org.hkijena.jipipe.plugins.expressions

JIPipeExpressionCustomASTParser.VariableNode - Class in org.hkijena.jipipe.plugins.expressions

JIPipeExpressionDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.expressions.ui

JIPipeExpressionDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.expressions.ui.JIPipeExpressionDesktopParameterEditorUI

JIPipeExpressionEvaluator - Class in org.hkijena.jipipe.plugins.expressions

Describes basic properties of a AbstractExpressionParameter

JIPipeExpressionEvaluator() - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

JIPipeExpressionEvaluatorSyntaxTokenMaker - Class in org.hkijena.jipipe.plugins.expressions

Generates tokens for an ExpressionEvaluator instance.

JIPipeExpressionEvaluatorSyntaxTokenMaker() - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluatorSyntaxTokenMaker

JIPipeExpressionParameter - Class in org.hkijena.jipipe.plugins.expressions

An AbstractExpressionParameter that utilizes the JIPipeExpressionEvaluator to generate results

JIPipeExpressionParameter() - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameter

JIPipeExpressionParameter(String) - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameter

JIPipeExpressionParameter(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameter

JIPipeExpressionParameter.Deserializer - Class in org.hkijena.jipipe.plugins.expressions

JIPipeExpressionParameter.List - Class in org.hkijena.jipipe.plugins.expressions

JIPipeExpressionParameter.Serializer - Class in org.hkijena.jipipe.plugins.expressions

JIPipeExpressionParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.expressions

Controls the behavior of an AbstractExpressionParameter.

JIPipeExpressionParameterVariableInfo - Class in org.hkijena.jipipe.plugins.expressions

JIPipeExpressionParameterVariableInfo(String, String, String) - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameterVariableInfo

JIPipeExpressionParameterVariables - Annotation Type in org.hkijena.jipipe.plugins.expressions

Repeats AddJIPipeExpressionParameterVariable

JIPipeExpressionRegistry - Class in org.hkijena.jipipe.api.registries

Registry for table operations and other functional expressions

JIPipeExpressionRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry

JIPipeExpressionRegistry.ColumnOperationEntry - Class in org.hkijena.jipipe.api.registries

A column operation entry

JIPipeExpressionRegistry.ExpressionFunctionEntry - Class in org.hkijena.jipipe.api.registries

JIPipeExpressionVariablesInfo - Interface in org.hkijena.jipipe.plugins.expressions

Provides the list of available variables.

JIPipeExpressionVariablesMap - Class in org.hkijena.jipipe.plugins.expressions

Object that carries variables for expressions

JIPipeExpressionVariablesMap() - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionVariablesMap

JIPipeExpressionVariablesMap(JIPipeExpressionVariablesMap) - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionVariablesMap

JIPipeExpressionVariablesMap(JIPipeSingleIterationStep) - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionVariablesMap

JIPipeExpressionVariablesMap(JIPipeMultiIterationStep) - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionVariablesMap

JIPipeExpressionVariablesMap(JIPipeAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionVariablesMap

JIPipeExtensionApplicationSettings - Class in org.hkijena.jipipe.plugins.settings

Settings related to how algorithms are executed

JIPipeExtensionApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeExtensionApplicationSettings

Creates a new instance

JIPipeExternalEnvironmentInstaller - Class in org.hkijena.jipipe.api.environments

Contains instructions to install an environment.

JIPipeExternalEnvironmentInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.api.environments.JIPipeExternalEnvironmentInstaller

JIPipeExternalEnvironmentRegistry - Class in org.hkijena.jipipe.api.registries

A registry for external environments

JIPipeExternalEnvironmentRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry

JIPipeExternalEnvironmentRegistry.InstallerEntry - Class in org.hkijena.jipipe.api.registries

An entry describing an installer

JIPipeExternalEnvironmentSettings - Interface in org.hkijena.jipipe.api.environments

A settings page that contains basic settings for all external environments.

JIPipeExtractTemplateZipFileRun - Class in org.hkijena.jipipe.desktop.app.project

JIPipeExtractTemplateZipFileRun(JIPipeProjectTemplate, Path) - Constructor for class org.hkijena.jipipe.desktop.app.project.JIPipeExtractTemplateZipFileRun

JIPipeFastThumbnail - Annotation Type in org.hkijena.jipipe.api.data.thumbnails

Marks a type to bypass the thumbnail generation queue and schedule thumbnails into the Swing threading system instead Do not use for types that may need heavy processing for thumbnail generation

JIPipeFileChooserApplicationSettings - Class in org.hkijena.jipipe.plugins.settings

Settings concerning file dialogs

JIPipeFileChooserApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

JIPipeFileChooserApplicationSettings.FileChooserType - Enum in org.hkijena.jipipe.plugins.settings

JIPipeFileChooserApplicationSettings.LastDirectoryKey - Enum in org.hkijena.jipipe.plugins.settings

JIPipeFilesystemPluginApplicationSettings - Class in org.hkijena.jipipe.plugins.filesystem

Settings for Filesystem.

JIPipeFilesystemPluginApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.filesystem.JIPipeFilesystemPluginApplicationSettings

JIPipeFileSystemReadDataStorage - Class in org.hkijena.jipipe.api.data.storage

Storage on a file system

JIPipeFileSystemReadDataStorage(JIPipeProgressInfo, Path) - Constructor for class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage

JIPipeFileSystemReadDataStorage(JIPipeProgressInfo, Path, Path) - Constructor for class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage

JIPipeFileSystemWriteDataStorage - Class in org.hkijena.jipipe.api.data.storage

Storage on a file system.

JIPipeFileSystemWriteDataStorage(JIPipeProgressInfo, Path) - Constructor for class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage

JIPipeFileSystemWriteDataStorage(JIPipeProgressInfo, Path, Path) - Constructor for class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage

JIPipeFixedThreadPool - Class in org.hkijena.jipipe.api

Contains a fixed thread pool.

JIPipeFixedThreadPool(int) - Constructor for class org.hkijena.jipipe.api.JIPipeFixedThreadPool

Initializes a pool with the specified amount of threads.

JIPipeFunctionallyComparable - Interface in org.hkijena.jipipe.api

Implement this interface to allow the comparison of function (i.e. two objects can be different, but have the same function and yield the same results) Useful for custom parameter types.

JIPipeGeneralDataApplicationSettings - Class in org.hkijena.jipipe.plugins.settings

JIPipeGeneralDataApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

JIPipeGeneralUIApplicationSettings - Class in org.hkijena.jipipe.plugins.settings

All settings for AbstractJIPipeDesktopGraphEditorUI

JIPipeGeneralUIApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

JIPipeGraph - Class in org.hkijena.jipipe.api.nodes

Manages multiple JIPipeGraphNode instances as graph

JIPipeGraph() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph

Creates a new node type graph

JIPipeGraph(JIPipeGraph) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph

Creates a deep copy of the other algorithm graph.

JIPipeGraph.Deserializer - Class in org.hkijena.jipipe.api.nodes

Deserializes an JIPipeGraph

JIPipeGraph.GraphChangedEvent - Class in org.hkijena.jipipe.api.nodes

Event is triggered when algorithm graph is changed

JIPipeGraph.GraphChangedEventEmitter - Class in org.hkijena.jipipe.api.nodes

JIPipeGraph.GraphChangedEventListener - Interface in org.hkijena.jipipe.api.nodes

JIPipeGraph.NodeAddedEvent - Class in org.hkijena.jipipe.api.nodes

JIPipeGraph.NodeAddedEventEmitter - Class in org.hkijena.jipipe.api.nodes

JIPipeGraph.NodeAddedEventListener - Interface in org.hkijena.jipipe.api.nodes

JIPipeGraph.NodeConnectedEvent - Class in org.hkijena.jipipe.api.nodes

Generated when a connection was made in JIPipeGraph

JIPipeGraph.NodeConnectedEventEmitter - Class in org.hkijena.jipipe.api.nodes

JIPipeGraph.NodeConnectedEventListener - Interface in org.hkijena.jipipe.api.nodes

JIPipeGraph.NodeDisconnectedEvent - Class in org.hkijena.jipipe.api.nodes

Generated when slots are disconnected

JIPipeGraph.NodeDisconnectedEventEmitter - Class in org.hkijena.jipipe.api.nodes

JIPipeGraph.NodeDisconnectedEventListener - Interface in org.hkijena.jipipe.api.nodes

JIPipeGraph.NodeRemovedEvent - Class in org.hkijena.jipipe.api.nodes

JIPipeGraph.NodeRemovedEventEmitter - Class in org.hkijena.jipipe.api.nodes

JIPipeGraph.NodeRemovedEventListener - Interface in org.hkijena.jipipe.api.nodes

JIPipeGraph.Serializer - Class in org.hkijena.jipipe.api.nodes

Serializes an JIPipeGraph

JIPipeGraphAutoLayoutImplementation - Interface in org.hkijena.jipipe.desktop.app.grapheditor.commons.layout

JIPipeGraphConnection - Class in org.hkijena.jipipe.api.nodes

A pair-like object that contains a connection within a JIPipeGraph

JIPipeGraphConnection(JIPipeGraph, JIPipeDataSlot, JIPipeDataSlot, JIPipeGraphEdge) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphConnection

JIPipeGraphEdge - Class in org.hkijena.jipipe.api.nodes

A custom graph edge

JIPipeGraphEdge() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphEdge

Initializes a new graph edge that cannot be disconnected by users

JIPipeGraphEdge(boolean) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphEdge

Initializes a new graph edge

JIPipeGraphEdge.Shape - Enum in org.hkijena.jipipe.api.nodes

Available line shapes

JIPipeGraphEdge.Visibility - Enum in org.hkijena.jipipe.api.nodes

JIPipeGraphEditorTool - Interface in org.hkijena.jipipe.api.grapheditortool

JIPipeGraphEditorToolRegistry - Class in org.hkijena.jipipe.api.registries

JIPipeGraphEditorToolRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeGraphEditorToolRegistry

JIPipeGraphEditorUIApplicationSettings - Class in org.hkijena.jipipe.plugins.settings

All settings for AbstractJIPipeDesktopGraphEditorUI

JIPipeGraphEditorUIApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

JIPipeGraphEditorUIApplicationSettings.DockLayoutSettings - Class in org.hkijena.jipipe.plugins.settings

JIPipeGraphEditorUIApplicationSettings.NodeSearchSettings - Class in org.hkijena.jipipe.plugins.settings

JIPipeGraphNode - Class in org.hkijena.jipipe.api.nodes

A node is a set of input and output data slots, and a run() function It is part of the JIPipeGraph.

JIPipeGraphNode(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Initializes this algorithm with a custom provided slot configuration

JIPipeGraphNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Initializes a new node type instance

JIPipeGraphNode(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Copies the input algorithm's properties into this algorithm

JIPipeGraphNode.BaseDirectoryChangedEvent - Class in org.hkijena.jipipe.api.nodes

Triggered when the base directory of a project or algorithm was changed

JIPipeGraphNode.BaseDirectoryChangedEventEmitter - Class in org.hkijena.jipipe.api.nodes

JIPipeGraphNode.BaseDirectoryChangedEventListener - Interface in org.hkijena.jipipe.api.nodes

JIPipeGraphNode.NodeSlotsChangedEvent - Class in org.hkijena.jipipe.api.nodes

Triggered when an algorithm's slots change

JIPipeGraphNode.NodeSlotsChangedEventEmitter - Class in org.hkijena.jipipe.api.nodes

JIPipeGraphNode.NodeSlotsChangedEventListener - Interface in org.hkijena.jipipe.api.nodes

JIPipeGraphNode.Serializer - Class in org.hkijena.jipipe.api.nodes

Serializes an JIPipeGraphNode instance

JIPipeGraphNodeRunContext - Class in org.hkijena.jipipe.api.nodes

JIPipeGraphNodeRunContext() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphNodeRunContext

JIPipeGraphRun - Class in org.hkijena.jipipe.api.run

JIPipeGraphRun(JIPipeGraphRun, JIPipeGraph, JIPipeGraphRunConfiguration) - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRun

JIPipeGraphRun(JIPipeProject, JIPipeGraphRunConfiguration) - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRun

JIPipeGraphRunConfiguration - Class in org.hkijena.jipipe.api.run

Settings for an JIPipeGraphRun

JIPipeGraphRunConfiguration() - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

JIPipeGraphRunConfiguration(JIPipeGraphRunConfiguration) - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

JIPipeGraphRunDataFlowGraph - Class in org.hkijena.jipipe.api.run

Graph that contains input slots, nodes, and output slots with weights Contains JIPipeInputDataSlot, JIPipeOutputDataSlot, and JIPipeGraphNode Used for finding the optimal path through the graph.

JIPipeGraphRunDataFlowGraph() - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph

JIPipeGraphRunDataFlowGraph(JIPipeGraph, Set<JIPipeGraphNode>) - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph

JIPipeGraphRunGCGraph - Class in org.hkijena.jipipe.api.run

A graph that allows to track which data is currently being used Contains JIPipeInputDataSlot, JIPipeOutputDataSlot, and JIPipeGraphNode Unlike the JIPipeGraphRunDataFlowGraph, this graph works on edges

JIPipeGraphRunGCGraph() - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph

JIPipeGraphRunGCGraph(JIPipeGraph, Set<JIPipeGraphNode>) - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph

JIPipeGraphRunGCGraph.GCEvent - Class in org.hkijena.jipipe.api.run

JIPipeGraphRunGCGraph.GCEventEmitter - Class in org.hkijena.jipipe.api.run

JIPipeGraphRunGCGraph.GCEventListener - Interface in org.hkijena.jipipe.api.run

JIPipeGraphRunPartitionGraph - Class in org.hkijena.jipipe.api.run

JIPipeGraphRunPartitionGraph(JIPipeGraphRun) - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunPartitionGraph

JIPipeGraphRunPartitionGraph(JIPipeGraph, JIPipeGraphRun) - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunPartitionGraph

JIPipeGraphRunPartitionInheritedBoolean - Enum in org.hkijena.jipipe.api.run

JIPipeGraphType - Enum in org.hkijena.jipipe.api

Attached to JIPipeGraph instances to indicate which kind of graph they are

JIPipeGraphViewMode - Enum in org.hkijena.jipipe.desktop.app.grapheditor

The direction how a canvas renders the nodes

JIPipeGraphWrapperAlgorithm - Class in org.hkijena.jipipe.api.grouping

An algorithm that wraps another algorithm graph

JIPipeGraphWrapperAlgorithm(JIPipeNodeInfo, JIPipeGraph) - Constructor for class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

JIPipeGraphWrapperAlgorithm(JIPipeGraphWrapperAlgorithm) - Constructor for class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

Copies the algorithm

JIPipeGraphWrapperAlgorithm.IterationMode - Enum in org.hkijena.jipipe.api.grouping

Determines how the data is iterated

JIPipeGraphWrapperAlgorithm.IterationModeEnumInfo - Class in org.hkijena.jipipe.api.grouping

JIPipeGridThumbnailData - Class in org.hkijena.jipipe.api.data.thumbnails

JIPipeGridThumbnailData(List<JIPipeThumbnailData>) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData

JIPipeGridThumbnailData(JIPipeGridThumbnailData) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData

JIPipeGUICommand - Class in org.hkijena.jipipe

Command that runs the GUI

JIPipeGUICommand() - Constructor for class org.hkijena.jipipe.JIPipeGUICommand

JIPipeHistoryJournal - Interface in org.hkijena.jipipe.api.history

Base class for all journals that track the history of projects or graphs

JIPipeHistoryJournal.HistoryChangedEvent - Class in org.hkijena.jipipe.api.history

Event when the history log was changed

JIPipeHistoryJournal.HistoryChangedEventEmitter - Class in org.hkijena.jipipe.api.history

JIPipeHistoryJournal.HistoryChangedEventListener - Interface in org.hkijena.jipipe.api.history

JIPipeHistoryJournalApplicationSettings - Class in org.hkijena.jipipe.plugins.settings

All settings for AbstractJIPipeDesktopGraphEditorUI

JIPipeHistoryJournalApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeHistoryJournalApplicationSettings

JIPipeHistoryJournalSnapshot - Interface in org.hkijena.jipipe.api.history

JIPipeIconLabelThumbnailData - Class in org.hkijena.jipipe.api.data.thumbnails

JIPipeIconLabelThumbnailData(String, String) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData

JIPipeIconLabelThumbnailData(JIPipeIconLabelThumbnailData) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData

JIPipeImageJAdapterRegistry - Class in org.hkijena.jipipe.api.registries

Registers all known adapters between ImageJ and JIPipe data types

JIPipeImageJAdapterRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry

JIPipeImageJUpdateSiteDependency - Class in org.hkijena.jipipe

A dependency that points to an ImageJ update site.

JIPipeImageJUpdateSiteDependency() - Constructor for class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency

JIPipeImageJUpdateSiteDependency(String, String) - Constructor for class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency

JIPipeImageJUpdateSiteDependency(UpdateSite) - Constructor for class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency

Initializes the dependency from an update site

JIPipeImageJUpdateSiteDependency(JIPipeImageJUpdateSiteDependency) - Constructor for class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency

JIPipeImageJUpdateSiteDependency.List - Class in org.hkijena.jipipe

the List class

JIPipeImageThumbnailData - Class in org.hkijena.jipipe.api.data.thumbnails

JIPipeImageThumbnailData(ImagePlus) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData

JIPipeImageThumbnailData(ImageProcessor) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData

JIPipeImageThumbnailData(Image) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData

JIPipeImageThumbnailData(JIPipeImageThumbnailData) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData

JIPipeInputDataSlot - Class in org.hkijena.jipipe.api.data

JIPipeInputDataSlot(JIPipeDataSlotInfo, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.data.JIPipeInputDataSlot

JIPipeInputDataSlot(JIPipeDataSlot, boolean, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.api.data.JIPipeInputDataSlot

JIPipeIOSlotConfiguration - Class in org.hkijena.jipipe.api.nodes

Slot configuration that always ensures 1:1 relation between input and output slots

JIPipeIOSlotConfiguration() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeIOSlotConfiguration

Creates a new instance

JIPipeIteratingAlgorithm - Class in org.hkijena.jipipe.api.nodes.algorithm

An JIPipeAlgorithm that iterates through each data row.

JIPipeIteratingAlgorithm(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm

Creates a new instance

JIPipeIteratingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm

Creates a new instance

JIPipeIteratingAlgorithm(JIPipeIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm

Copies the algorithm

JIPipeIteratingAlgorithmIterationStepGenerationSettings - Class in org.hkijena.jipipe.api.nodes.algorithm

Groups iteration step generation settings

JIPipeIteratingAlgorithmIterationStepGenerationSettings() - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

JIPipeIteratingAlgorithmIterationStepGenerationSettings(JIPipeIteratingAlgorithmIterationStepGenerationSettings) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

JIPipeIteratingMissingDataGeneratorAlgorithm - Class in org.hkijena.jipipe.api.nodes.algorithm

An JIPipeAlgorithm that passes incoming data to their corresponding output slots if the iteration step is complete and otherwise runs a generator function that generates missing data items.

JIPipeIteratingMissingDataGeneratorAlgorithm(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm

Creates a new instance

JIPipeIteratingMissingDataGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm

Creates a new instance

JIPipeIteratingMissingDataGeneratorAlgorithm(JIPipeIteratingMissingDataGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm

Copies the algorithm

JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings - Class in org.hkijena.jipipe.api.nodes.algorithm

Groups iteration step generation settings

JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings() - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings(JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

JIPipeIterationContext - Interface in org.hkijena.jipipe.api.nodes.iterationstep

JIPipeIterationStep - Interface in org.hkijena.jipipe.api.nodes.iterationstep

JIPipeIterationStepAlgorithm - Interface in org.hkijena.jipipe.api.nodes.iterationstep

Methods shared across all JIPipeAlgorithm that generate iteration steps

JIPipeIterationStepGenerationSettings - Interface in org.hkijena.jipipe.api.nodes.iterationstep

JIPipeJavaExtensionInitializationInfo - Class in org.hkijena.jipipe

JIPipeJavaExtensionInitializationInfo() - Constructor for class org.hkijena.jipipe.JIPipeJavaExtensionInitializationInfo

JIPipeJavaNodeInfo - Class in org.hkijena.jipipe.api.nodes.infos

JIPipeNodeInfo for an algorithm that is defined in Java code All necessary properties are extracted from class attributes

JIPipeJavaNodeInfo(String, Class<? extends JIPipeGraphNode>) - Constructor for class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo

Creates a new node type info

JIPipeJavaNodeInfo.Serializer - Class in org.hkijena.jipipe.api.nodes.infos

Serializes the info

JIPipeJavaNodeRegistrationTask - Class in org.hkijena.jipipe.api.registries

Registers a Java algorithm

JIPipeJavaNodeRegistrationTask(String, Class<? extends JIPipeGraphNode>, JIPipeDependency, URL) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeJavaNodeRegistrationTask

Creates a new registration task

JIPipeJavaPlugin - Interface in org.hkijena.jipipe

A Java extension

JIPipeJsonPlugin - Class in org.hkijena.jipipe

A JSON-serializable extension

JIPipeJsonPlugin() - Constructor for class org.hkijena.jipipe.JIPipeJsonPlugin

Creates a new instance

JIPipeJsonPlugin.Deserializer - Class in org.hkijena.jipipe

Deserializer for the JIPipeJsonPlugin.

JIPipeLauncher - Class in org.hkijena.jipipe

Deprecated.

JIPipeLauncher() - Constructor for class org.hkijena.jipipe.JIPipeLauncher

Deprecated.

JIPipeLegacyDataImportOperation - Interface in org.hkijena.jipipe.api.data

An operation that is executed on showing existing data located in memory/cache The operations must be registered and will appear if the developer does not override the default importer row UI.

JIPipeLegacyDataOperation - Interface in org.hkijena.jipipe.api.data

A user-interface operation on data

JIPipeLegacyNodeDatabaseSearch - Class in org.hkijena.jipipe.api.nodes.database

JIPipeLegacyNodeDatabaseSearch(JIPipeNodeDatabase) - Constructor for class org.hkijena.jipipe.api.nodes.database.JIPipeLegacyNodeDatabaseSearch

JIPipeLocalArtifact - Class in org.hkijena.jipipe.api.artifacts

JIPipeLocalArtifact() - Constructor for class org.hkijena.jipipe.api.artifacts.JIPipeLocalArtifact

JIPipeLocalArtifact(JIPipeLocalArtifact) - Constructor for class org.hkijena.jipipe.api.artifacts.JIPipeLocalArtifact

JIPipeLocalDataBrowser - Class in org.hkijena.jipipe.api.data.browser

JIPipeLocalDataBrowser(JIPipeDataItemStore) - Constructor for class org.hkijena.jipipe.api.data.browser.JIPipeLocalDataBrowser

JIPipeLocalDataTableBrowser - Class in org.hkijena.jipipe.api.data.browser

JIPipeLocalDataTableBrowser(JIPipeDataTable) - Constructor for class org.hkijena.jipipe.api.data.browser.JIPipeLocalDataTableBrowser

JIPipeLocalProjectMemoryCache - Class in org.hkijena.jipipe.api.cache

JIPipeLocalProjectMemoryCache(JIPipeProject) - Constructor for class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache

JIPipeLogger - Class in org.hkijena.jipipe.plugins.ijtrackmate.utils

JIPipeLogger(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.utils.JIPipeLogger

JIPipeManualParameterAccess - Class in org.hkijena.jipipe.api.parameters

A custom parameter access

JIPipeManualParameterAccess.Builder - Class in org.hkijena.jipipe.api.parameters

A builder for JIPipeManualParameterAccess

JIPipeMenuExtensionTarget - Enum in org.hkijena.jipipe.desktop.api

Determines in which menu a menu extension is placed

JIPipeMergedDataTableInfo - Class in org.hkijena.jipipe.api.data.serialization

Merges multiple JIPipeDataTableInfo

JIPipeMergedDataTableInfo() - Constructor for class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableInfo

JIPipeMergingAlgorithm - Class in org.hkijena.jipipe.api.nodes.algorithm

An JIPipeAlgorithm that applies a similar algorithm to JIPipeIteratingAlgorithm, but does create JIPipeMultiIterationStep instead.

JIPipeMergingAlgorithm(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

Creates a new instance

JIPipeMergingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

Creates a new instance

JIPipeMergingAlgorithm(JIPipeMergingAlgorithm) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

Copies the algorithm

JIPipeMergingAlgorithmIterationStepGenerationSettings - Class in org.hkijena.jipipe.api.nodes.algorithm

JIPipeMergingAlgorithmIterationStepGenerationSettings() - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

JIPipeMergingAlgorithmIterationStepGenerationSettings(JIPipeMergingAlgorithmIterationStepGenerationSettings) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

JIPipeMergingAlgorithmIterationStepGenerationSettings(JIPipeIteratingAlgorithmIterationStepGenerationSettings) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

JIPipeMetadataObject - Interface in org.hkijena.jipipe.api

JIPipeMetadataRegistry - Class in org.hkijena.jipipe.api.registries

A registry of JIPipeMetadataObject types

JIPipeMetadataRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeMetadataRegistry

JIPipeMissingDataGeneratorAlgorithm - Class in org.hkijena.jipipe.api.nodes.algorithm

An JIPipeAlgorithm that passes incoming data to their corresponding output slots if the iteration step is complete and otherwise runs a generator function that generates missing data items.

JIPipeMissingDataGeneratorAlgorithm(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm

Creates a new instance

JIPipeMissingDataGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm

Creates a new instance

JIPipeMissingDataGeneratorAlgorithm(JIPipeMissingDataGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm

Copies the algorithm

JIPipeMissingDataGeneratorIterationStepGenerationSettings - Class in org.hkijena.jipipe.api.nodes.algorithm

Groups iteration step generation settings

JIPipeMissingDataGeneratorIterationStepGenerationSettings() - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings

JIPipeMissingDataGeneratorIterationStepGenerationSettings(JIPipeMissingDataGeneratorIterationStepGenerationSettings) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings

JIPipeMoveNodesGraphEditorTool - Class in org.hkijena.jipipe.api.grapheditortool

JIPipeMoveNodesGraphEditorTool() - Constructor for class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

JIPipeMultiIterationStep - Class in org.hkijena.jipipe.api.nodes.iterationstep

Wraps a set of input and output slots that belong together.

JIPipeMultiIterationStep(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Creates a new interface

JIPipeMultiIterationStep(JIPipeMultiIterationStep) - Constructor for class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Creates a copy

JIPipeMultiIterationStepGenerator - Class in org.hkijena.jipipe.api.nodes.iterationstep

Class that generates a JIPipeMultiIterationStep or JIPipeSingleIterationStep instance.

JIPipeMultiIterationStepGenerator() - Constructor for class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

JIPipeMultiParameterAccess - Class in org.hkijena.jipipe.api.parameters

Writes values into multiple parameter accesses The displayed value is obtained from the first entry

JIPipeMultiParameterAccess(List<JIPipeParameterAccess>) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess

JIPipeMutableDataContext - Class in org.hkijena.jipipe.api.data.context

JIPipeMutableDataContext() - Constructor for class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext

JIPipeMutableDataContext(String) - Constructor for class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext

JIPipeMutableDataContext(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext

JIPipeMutableDependency - Class in org.hkijena.jipipe

A JSON-serializable JIPipeDependency.

JIPipeMutableDependency() - Constructor for class org.hkijena.jipipe.JIPipeMutableDependency

Creates a new instance

JIPipeMutableDependency(String, String, String) - Constructor for class org.hkijena.jipipe.JIPipeMutableDependency

JIPipeMutableDependency(JIPipeDependency) - Constructor for class org.hkijena.jipipe.JIPipeMutableDependency

Copies the dependency

JIPipeMutableIterationContext - Class in org.hkijena.jipipe.api.nodes.iterationstep

JIPipeMutableIterationContext() - Constructor for class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMutableIterationContext

JIPipeMutableIterationContext(int, int) - Constructor for class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMutableIterationContext

JIPipeMutableIterationContext(JIPipeMutableIterationContext) - Constructor for class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMutableIterationContext

JIPipeMutableNodeInfo - Class in org.hkijena.jipipe.api.nodes.infos

Instantiates JIPipeGraphNode instances

JIPipeMutableNodeInfo() - Constructor for class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

JIPipeMutableParameterAccess - Class in org.hkijena.jipipe.api.parameters

A mutable implementation of JIPipeParameterAccess The class is partially JSON-serializable (Annotations, for example, are excluded)

JIPipeMutableParameterAccess() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

Creates a new instance

JIPipeMutableParameterAccess(JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

Creates a new independent parameter from the provided access

JIPipeMutableParameterAccess(JIPipeParameterCollection, String, Class<?>) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

Creates a new instance

JIPipeMutableParameterAccess(JIPipeMutableParameterAccess) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

Copies the parameter access

JIPipeMutableParameterAccess.Deserializer - Class in org.hkijena.jipipe.api.parameters

Deserializes JIPipeMutableParameterAccess

JIPipeMutableSlotConfiguration - Interface in org.hkijena.jipipe.api.data

A slot configuration that can be changed.

JIPipeNamedParameterCollection - Interface in org.hkijena.jipipe.api.parameters

An JIPipeParameterCollection that comes with a predefined name

JIPipeNodeDatabase - Class in org.hkijena.jipipe.api.nodes.database

Allows to query nodes

JIPipeNodeDatabase() - Constructor for class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase

JIPipeNodeDatabase(JIPipeProject) - Constructor for class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase

JIPipeNodeDatabaseBuilderRun - Class in org.hkijena.jipipe.api.nodes.database

JIPipeNodeDatabaseBuilderRun(JIPipeNodeDatabase) - Constructor for class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseBuilderRun

JIPipeNodeDatabaseEntry - Interface in org.hkijena.jipipe.api.nodes.database

JIPipeNodeDatabasePipelineVisibility - Enum in org.hkijena.jipipe.api.nodes.database

JIPipeNodeDatabaseUpdater - Class in org.hkijena.jipipe.api.nodes.database

JIPipeNodeDatabaseUpdater(JIPipeNodeDatabase) - Constructor for class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseUpdater

JIPipeNodeExample - Class in org.hkijena.jipipe.api.nodes

Contains functions around a JIPipeNodeTemplate that stores an example of a node

JIPipeNodeExample(JIPipeNodeTemplate) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeNodeExample

JIPipeNodeExampleListCellRenderer - Class in org.hkijena.jipipe.plugins.nodeexamples

Renderer for JIPipeNodeExample

JIPipeNodeExampleListCellRenderer() - Constructor for class org.hkijena.jipipe.plugins.nodeexamples.JIPipeNodeExampleListCellRenderer

Creates a new renderer

JIPipeNodeExamplePickerDialog - Class in org.hkijena.jipipe.plugins.nodeexamples

JIPipeNodeExamplePickerDialog(Window) - Constructor for class org.hkijena.jipipe.plugins.nodeexamples.JIPipeNodeExamplePickerDialog

JIPipeNodeGroup - Class in org.hkijena.jipipe.api.grouping

A sub-graph algorithm that can be defined by a user

JIPipeNodeGroup(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

Creates a new instance

JIPipeNodeGroup(JIPipeNodeGroup) - Constructor for class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

Creates a copy

JIPipeNodeGroup(JIPipeGraph, boolean, boolean, boolean) - Constructor for class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

Initializes from an existing graph

JIPipeNodeInfo - Interface in org.hkijena.jipipe.api.nodes

Describes an JIPipeGraphNode

JIPipeNodeInfoListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.renderers

Renderer for JIPipeNodeInfo

JIPipeNodeInfoListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeNodeInfoListCellRenderer

Creates a new renderer

JIPipeNodeInfoOrExamplesListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.renderers

Renderer for JIPipeNodeInfo and JIPipeNodeExample

JIPipeNodeInfoOrExamplesListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeNodeInfoOrExamplesListCellRenderer

Creates a new renderer

JIPipeNodeInfoRef - Class in org.hkijena.jipipe.plugins.parameters.library.references

A parameter that holds a reference to an JIPipeNodeInfo

JIPipeNodeInfoRef(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeNodeInfoRef

JIPipeNodeInfoRef(JIPipeNodeInfoRef) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeNodeInfoRef

Creates a copy

JIPipeNodeInfoRef() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeNodeInfoRef

New instance

JIPipeNodeInfoRef.Deserializer - Class in org.hkijena.jipipe.plugins.parameters.library.references

Deserializes the reference from a string

JIPipeNodeInfoRef.Serializer - Class in org.hkijena.jipipe.plugins.parameters.library.references

Serializes the reference as ID

JIPipeNodeInfoRefDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.references

Parameter for JIPipeNodeInfoRef

JIPipeNodeInfoRefDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeNodeInfoRefDesktopParameterEditorUI

JIPipeNodeMenuLocation - Class in org.hkijena.jipipe.api.nodes

Describes where a node is located in the menu

JIPipeNodeMenuLocation(JIPipeNodeTypeCategory, String, String) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeNodeMenuLocation

JIPipeNodeRegistrationTask - Interface in org.hkijena.jipipe.api.registries

A task for algorithm registration that can handle algorithm dependencies

JIPipeNodeRegistry - Class in org.hkijena.jipipe.api.registries

Manages known algorithms and their annotations

JIPipeNodeRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Creates a new registry

JIPipeNodeTemplate - Class in org.hkijena.jipipe.api

Contains the JSON data of a node that can be created by a user for sharing An intermediate between copying a node and a proper plugin.

JIPipeNodeTemplate() - Constructor for class org.hkijena.jipipe.api.JIPipeNodeTemplate

JIPipeNodeTemplate(JIPipeNodeTemplate) - Constructor for class org.hkijena.jipipe.api.JIPipeNodeTemplate

JIPipeNodeTemplate.List - Class in org.hkijena.jipipe.api

JIPipeNodeTemplateApplicationSettings - Class in org.hkijena.jipipe.plugins.settings

JIPipeNodeTemplateApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeNodeTemplateApplicationSettings

JIPipeNodeTemplateDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.nodetemplate

JIPipeNodeTemplateDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.nodetemplate.JIPipeNodeTemplateDesktopParameterEditorUI

JIPipeNodeTemplateListCellRenderer - Class in org.hkijena.jipipe.plugins.nodetemplate

Renderer for JIPipeNodeInfo

JIPipeNodeTemplateListCellRenderer(JComponent, Set<JIPipeNodeTemplate>) - Constructor for class org.hkijena.jipipe.plugins.nodetemplate.JIPipeNodeTemplateListCellRenderer

Creates a new renderer

JIPipeNodeTemplateRegistry - Class in org.hkijena.jipipe.api.registries

JIPipeNodeTemplateRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

JIPipeNodeTypeCategory - Interface in org.hkijena.jipipe.api.nodes

Describes a node category

JIPipeNotification - Class in org.hkijena.jipipe.api.notifications

A notification that is shown to the user

JIPipeNotification(String) - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotification

JIPipeNotification(String, String, String, JIPipeNotificationAction...) - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotification

JIPipeNotification(JIPipeNotification) - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotification

JIPipeNotificationAction - Class in org.hkijena.jipipe.api.notifications

JIPipeNotificationAction() - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction

JIPipeNotificationAction(String, String, Icon, Consumer<JIPipeWorkbench>) - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction

JIPipeNotificationAction(String, String, Icon, JIPipeNotificationAction.Style, Consumer<JIPipeWorkbench>) - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction

JIPipeNotificationAction.Style - Enum in org.hkijena.jipipe.api.notifications

JIPipeNotificationInbox - Class in org.hkijena.jipipe.api.notifications

A list of notifications that has not yet been reviewed

JIPipeNotificationInbox() - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox

JIPipeNotificationInbox(JIPipeNotificationInbox) - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox

JIPipeNotificationInbox.DismissedEvent - Class in org.hkijena.jipipe.api.notifications

JIPipeNotificationInbox.DismissedEventEmitter - Class in org.hkijena.jipipe.api.notifications

JIPipeNotificationInbox.DismissedEventListener - Interface in org.hkijena.jipipe.api.notifications

JIPipeNotificationInbox.PushedEvent - Class in org.hkijena.jipipe.api.notifications

JIPipeNotificationInbox.PushedEventEmitter - Class in org.hkijena.jipipe.api.notifications

JIPipeNotificationInbox.PushedEventListener - Interface in org.hkijena.jipipe.api.notifications

JIPipeNotificationInbox.UpdatedEvent - Class in org.hkijena.jipipe.api.notifications

Event triggered when an inbox is updated

JIPipeNotificationInbox.UpdatedEventEmitter - Class in org.hkijena.jipipe.api.notifications

JIPipeNotificationInbox.UpdatedEventListener - Interface in org.hkijena.jipipe.api.notifications

JIPipeNotificationUIApplicationSettings - Class in org.hkijena.jipipe.plugins.settings

JIPipeNotificationUIApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

JIPipeOutputData - Class in org.hkijena.jipipe.plugins.utils.datatypes

JIPipeOutputData(Path) - Constructor for class org.hkijena.jipipe.plugins.utils.datatypes.JIPipeOutputData

Initializes file data from a file

JIPipeOutputData(String) - Constructor for class org.hkijena.jipipe.plugins.utils.datatypes.JIPipeOutputData

JIPipeOutputDataSlot - Class in org.hkijena.jipipe.api.data

JIPipeOutputDataSlot(JIPipeDataSlotInfo, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.data.JIPipeOutputDataSlot

JIPipeOutputDataSlot(JIPipeDataSlot, boolean, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.api.data.JIPipeOutputDataSlot

JIPipeParallelizedAlgorithm - Interface in org.hkijena.jipipe.api.nodes

Algorithm that supports parallelization

JIPipeParameter - Annotation Type in org.hkijena.jipipe.api.parameters

Annotates a getter or setter function as parameter.

JIPipeParameterAccess - Interface in org.hkijena.jipipe.api.parameters

Interface around accessing a parameter

JIPipeParameterCollection - Interface in org.hkijena.jipipe.api.parameters

Interfaced for a parameterized object

JIPipeParameterCollection.ParameterChangedEvent - Class in org.hkijena.jipipe.api.parameters

Triggered when a parameter holder's parameters are changed

JIPipeParameterCollection.ParameterChangedEventEmitter - Class in org.hkijena.jipipe.api.parameters

Emitter for JIPipeParameterCollection.ParameterChangedEvent

JIPipeParameterCollection.ParameterChangedEventListener - Interface in org.hkijena.jipipe.api.parameters

Listener for JIPipeParameterCollection.ParameterChangedEvent

JIPipeParameterCollection.ParameterStructureChangedEvent - Class in org.hkijena.jipipe.api.parameters

Triggered by an JIPipeParameterCollection if the list of available parameters is changed.

JIPipeParameterCollection.ParameterStructureChangedEventEmitter - Class in org.hkijena.jipipe.api.parameters

Emitter for JIPipeParameterCollection.ParameterStructureChangedEvent

JIPipeParameterCollection.ParameterStructureChangedEventListener - Interface in org.hkijena.jipipe.api.parameters

Listener for JIPipeParameterCollection.ParameterStructureChangedEvent

JIPipeParameterCollection.ParameterUIChangedEvent - Class in org.hkijena.jipipe.api.parameters

Triggered by an JIPipeParameterCollection if the parameter UI should be updated

JIPipeParameterCollection.ParameterUIChangedEventEmitter - Class in org.hkijena.jipipe.api.parameters

Emitter for JIPipeParameterCollection.ParameterUIChangedEvent

JIPipeParameterCollection.ParameterUIChangedEventListener - Interface in org.hkijena.jipipe.api.parameters

Listener for JIPipeParameterCollection.ParameterUIChangedEvent

JIPipeParameterCollectionContextAction - Interface in org.hkijena.jipipe.api.parameters

JIPipeParameterCollectionDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.jipipe

JIPipeParameterCollectionDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeParameterCollectionDesktopParameterEditorUI

JIPipeParameterCollectionVisibilities - Class in org.hkijena.jipipe.api.parameters

Used as parameter to control the visibility of an existing parameter collection

JIPipeParameterCollectionVisibilities() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionVisibilities

JIPipeParameterCollectionVisibilities(JIPipeParameterCollectionVisibilities) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionVisibilities

Creates a copy

JIPipeParameterCollectionVisibilitiesDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.editors

UI around JIPipeParameterCollectionVisibilities

JIPipeParameterCollectionVisibilitiesDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.editors.JIPipeParameterCollectionVisibilitiesDesktopParameterEditorUI

JIPipeParameterGenerator - Interface in org.hkijena.jipipe.api.parameters

A class that generates parameters

JIPipeParameterlessSimpleIteratingAlgorithm - Class in org.hkijena.jipipe.api.nodes.algorithm

An JIPipeAlgorithm that iterates through each data row.

JIPipeParameterlessSimpleIteratingAlgorithm(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm

Creates a new instance

JIPipeParameterlessSimpleIteratingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm

Creates a new instance

JIPipeParameterlessSimpleIteratingAlgorithm(JIPipeParameterlessSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm

Copies the algorithm

JIPipeParameterlessSimpleIteratingAlgorithm.IterationStepGenerationSettings - Class in org.hkijena.jipipe.api.nodes.algorithm

JIPipeParameterSerializationMode - Enum in org.hkijena.jipipe.api.parameters

Determines how a parameter of JIPipeParameterCollection is serialized

JIPipeParameterSlotAlgorithm - Class in org.hkijena.jipipe.api.nodes.algorithm

An JIPipeAlgorithm that has an optional slot that allows to supply parameter data sets.

JIPipeParameterSlotAlgorithm(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

JIPipeParameterSlotAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

JIPipeParameterSlotAlgorithm(JIPipeParameterSlotAlgorithm) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

JIPipeParameterSlotAlgorithmSettings - Class in org.hkijena.jipipe.api.nodes.algorithm

Groups parameter slot settings

JIPipeParameterSlotAlgorithmSettings() - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings

JIPipeParameterSlotAlgorithmSettings(JIPipeParameterSlotAlgorithmSettings) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings

JIPipeParameterTree - Class in org.hkijena.jipipe.api.parameters

An JIPipeParameterCollection that contains all the parameters of one or multiple JIPipeParameterCollection instances in a traversed form.

JIPipeParameterTree() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

JIPipeParameterTree(JIPipeParameterCollection) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Creates a new instance with a predefined root parameter

JIPipeParameterTree(JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Creates a new dummy tree for a single access

JIPipeParameterTree(JIPipeParameterCollection, int) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Creates a new instance with a predefined root parameter

JIPipeParameterTree.Node - Class in org.hkijena.jipipe.api.parameters

A node

JIPipeParameterTypeInfo - Interface in org.hkijena.jipipe.api.parameters

A type that describes a JIPipe parameter type

JIPipeParameterTypeInfoListCellRenderer - Class in org.hkijena.jipipe.desktop.commons.components.renderers

JIPipeParameterTypeInfoListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeParameterTypeInfoListCellRenderer

JIPipeParameterTypeInfoRef - Class in org.hkijena.jipipe.plugins.parameters.library.references

A parameter that holds a reference to an JIPipeParameterTypeInfo

JIPipeParameterTypeInfoRef(Class<?>) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeParameterTypeInfoRef

JIPipeParameterTypeInfoRef(JIPipeParameterTypeInfo) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeParameterTypeInfoRef

JIPipeParameterTypeInfoRef(JIPipeParameterTypeInfoRef) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeParameterTypeInfoRef

Creates a copy

JIPipeParameterTypeInfoRef() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeParameterTypeInfoRef

New instance

JIPipeParameterTypeInfoRef.Deserializer - Class in org.hkijena.jipipe.plugins.parameters.library.references

Deserializes the reference from a string

JIPipeParameterTypeInfoRef.Serializer - Class in org.hkijena.jipipe.plugins.parameters.library.references

Serializes the reference as ID

JIPipeParameterTypeInfoRefDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.references

Parameter for JIPipeParameterTypeInfoRef

JIPipeParameterTypeInfoRefDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeParameterTypeInfoRefDesktopParameterEditorUI

JIPipeParameterTypeRegistry - Class in org.hkijena.jipipe.api.registries

Registry for all known parameter types

JIPipeParameterTypeRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry

JIPipePercentageProgressInfo - Class in org.hkijena.jipipe.api

A JIPipeProgressInfo that logs the progress of 0 to 100 percent.

JIPipePercentageProgressInfo() - Constructor for class org.hkijena.jipipe.api.JIPipePercentageProgressInfo

JIPipePercentageProgressInfo(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.api.JIPipePercentageProgressInfo

JIPipepGraphAutoLayoutMethod - Enum in org.hkijena.jipipe.desktop.app.grapheditor.commons.layout

JIPipePlotDataClassFilter - Class in org.hkijena.jipipe.plugins.plots

JIPipePlotDataClassFilter() - Constructor for class org.hkijena.jipipe.plugins.plots.JIPipePlotDataClassFilter

JIPipePlotSeriesListEditorUI - Class in org.hkijena.jipipe.desktop.app.ploteditor

Manages the list of series in a JFreeChartPlotEditor

JIPipePlotSeriesListEditorUI(JIPipeDesktopWorkbench, JFreeChartPlotEditor) - Constructor for class org.hkijena.jipipe.desktop.app.ploteditor.JIPipePlotSeriesListEditorUI

Creates a new instance

JIPipePlugin - Interface in org.hkijena.jipipe

Interface shared between all JIPipe extensions

JIPipePluginRegistry - Class in org.hkijena.jipipe.api.registries

Registry for managing extensions

JIPipePluginRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

JIPipePluginRegistry.ScheduledActivatePluginEvent - Class in org.hkijena.jipipe.api.registries

Triggered by JIPipePluginRegistry when an extension is scheduled to be activated

JIPipePluginRegistry.ScheduledActivatePluginEventEmitter - Class in org.hkijena.jipipe.api.registries

JIPipePluginRegistry.ScheduledActivatePluginEventListener - Interface in org.hkijena.jipipe.api.registries

JIPipePluginRegistry.ScheduledDeactivatePluginEvent - Class in org.hkijena.jipipe.api.registries

Triggered by JIPipePluginRegistry when an extension is scheduled to be deactivated

JIPipePluginRegistry.ScheduledDeactivatePluginEventEmitter - Class in org.hkijena.jipipe.api.registries

JIPipePluginRegistry.ScheduledDeactivatePluginEventListener - Interface in org.hkijena.jipipe.api.registries

JIPipePluginRegistry.Settings - Class in org.hkijena.jipipe.api.registries

JIPipePrepackagedDefaultJavaPlugin - Class in org.hkijena.jipipe.plugins

JIPipeDefaultJavaPlugin for internal usage

JIPipePrepackagedDefaultJavaPlugin() - Constructor for class org.hkijena.jipipe.plugins.JIPipePrepackagedDefaultJavaPlugin

JIPipeProcessArtifactEnvironment - Class in org.hkijena.jipipe.api.environments

An artifact environment that points at an executable

JIPipeProcessArtifactEnvironment() - Constructor for class org.hkijena.jipipe.api.environments.JIPipeProcessArtifactEnvironment

JIPipeProcessArtifactEnvironment(JIPipeProcessArtifactEnvironment) - Constructor for class org.hkijena.jipipe.api.environments.JIPipeProcessArtifactEnvironment

JIPipeProcessesPluginApplicationSettings - Class in org.hkijena.jipipe.plugins.processes

JIPipeProcessesPluginApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.processes.JIPipeProcessesPluginApplicationSettings

JIPipeProgressInfo - Class in org.hkijena.jipipe.api

This object is available inside a JIPipeRunnable and contains methods to report progress, logs, and request cancellation.

JIPipeProgressInfo() - Constructor for class org.hkijena.jipipe.api.JIPipeProgressInfo

JIPipeProgressInfo(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.api.JIPipeProgressInfo

JIPipeProgressInfo.StatusUpdatedEvent - Class in org.hkijena.jipipe.api

JIPipeProgressInfo.StatusUpdatedEventEmitter - Class in org.hkijena.jipipe.api

JIPipeProgressInfo.StatusUpdatedEventListener - Interface in org.hkijena.jipipe.api

JIPipeProgressInfoETA - Class in org.hkijena.jipipe.api

Allows to provide users with an ETA

JIPipeProgressInfoETA() - Constructor for class org.hkijena.jipipe.api.JIPipeProgressInfoETA

JIPipeProgressInfoOutputStream - Class in org.hkijena.jipipe.api

JIPipeProgressInfoOutputStream(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.api.JIPipeProgressInfoOutputStream

JIPipeProject - Class in org.hkijena.jipipe.api.project

A JIPipe project.

JIPipeProject() - Constructor for class org.hkijena.jipipe.api.project.JIPipeProject

A JIPipe project

JIPipeProject.CompartmentAddedEvent - Class in org.hkijena.jipipe.api.project

Triggered when a sample is added to an JIPipeProject

JIPipeProject.CompartmentAddedEventEmitter - Class in org.hkijena.jipipe.api.project

JIPipeProject.CompartmentAddedEventListener - Interface in org.hkijena.jipipe.api.project

JIPipeProject.CompartmentRemovedEvent - Class in org.hkijena.jipipe.api.project

Triggered when a sample is removed from an JIPipeProject

JIPipeProject.CompartmentRemovedEventEmitter - Class in org.hkijena.jipipe.api.project

JIPipeProject.CompartmentRemovedEventListener - Interface in org.hkijena.jipipe.api.project

JIPipeProject.Deserializer - Class in org.hkijena.jipipe.api.project

Deserializes a project

JIPipeProject.Serializer - Class in org.hkijena.jipipe.api.project

Serializes a project

JIPipeProjectAuthorsApplicationSettings - Class in org.hkijena.jipipe.plugins.settings

JIPipeProjectAuthorsApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeProjectAuthorsApplicationSettings

JIPipeProjectBackupItem - Class in org.hkijena.jipipe.api.backups

A single backup item

JIPipeProjectBackupItem() - Constructor for class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItem

JIPipeProjectBackupItemCollection - Class in org.hkijena.jipipe.api.backups

Collection of backup items that are related to each other

JIPipeProjectBackupItemCollection() - Constructor for class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItemCollection

JIPipeProjectBackupSessionInfo - Class in org.hkijena.jipipe.api.backups

Contains basic information about a project backup session The serialized file should be contained within a backup-info.json file in a directory that contains all backup files of that session.

JIPipeProjectBackupSessionInfo() - Constructor for class org.hkijena.jipipe.api.backups.JIPipeProjectBackupSessionInfo

JIPipeProjectCompartment - Class in org.hkijena.jipipe.api.compartments.algorithms

A project compartment.

JIPipeProjectCompartment(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

JIPipeProjectCompartment(JIPipeProjectCompartment) - Constructor for class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

Copies the compartment

JIPipeProjectCompartmentOutput - Class in org.hkijena.jipipe.api.compartments.algorithms

A graph compartment output Transfers data 1:1 from input to output

JIPipeProjectCompartmentOutput(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartmentOutput

Creates a new instance.

JIPipeProjectCompartmentOutput(JIPipeProjectCompartmentOutput) - Constructor for class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartmentOutput

JIPipeProjectDefaultsApplicationSettings - Class in org.hkijena.jipipe.plugins.settings

Remembers the last projects

JIPipeProjectDefaultsApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeProjectDefaultsApplicationSettings

JIPipeProjectDefaultsApplicationSettings.ProjectTemplateEnum - Class in org.hkijena.jipipe.plugins.settings

An enum of strings that point to JIPipeProjectTemplate

JIPipeProjectDirectories - Class in org.hkijena.jipipe.api.project

JIPipeProjectDirectories() - Constructor for class org.hkijena.jipipe.api.project.JIPipeProjectDirectories

JIPipeProjectDirectories.DirectoryEntry - Class in org.hkijena.jipipe.api.project

JIPipeProjectDirectoriesVariablesInfo - Class in org.hkijena.jipipe.plugins.expressions

JIPipeProjectDirectoriesVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeProjectDirectoriesVariablesInfo

JIPipeProjectHistoryJournal - Class in org.hkijena.jipipe.api.history

JIPipeProjectHistoryJournal(JIPipeProject, JIPipeRunnableQueue) - Constructor for class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal

JIPipeProjectHistoryJournal.Snapshot - Class in org.hkijena.jipipe.api.history

Stores all information about the state of a

JIPipeProjectInfoParameters - Class in org.hkijena.jipipe.api.project

Additional metadata that provides parameter references for JIPipeDesktopProjectOverviewUI

JIPipeProjectInfoParameters() - Constructor for class org.hkijena.jipipe.api.project.JIPipeProjectInfoParameters

JIPipeProjectMetadata - Class in org.hkijena.jipipe.api.project

Metadata for a JIPipeProject

JIPipeProjectMetadata() - Constructor for class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

JIPipeProjectParameterDefinition - Class in org.hkijena.jipipe.plugins.utils.algorithms.meta

JIPipeProjectParameterDefinition(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.meta.JIPipeProjectParameterDefinition

JIPipeProjectParameterDefinition(DefineParametersTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.meta.JIPipeProjectParameterDefinition

JIPipeProjectPermissions - Class in org.hkijena.jipipe.api.project

JIPipeProjectPermissions() - Constructor for class org.hkijena.jipipe.api.project.JIPipeProjectPermissions

JIPipeProjectRunSet - Class in org.hkijena.jipipe.api.run

JIPipeProjectRunSet() - Constructor for class org.hkijena.jipipe.api.run.JIPipeProjectRunSet

JIPipeProjectRunSet(JIPipeProjectRunSet) - Constructor for class org.hkijena.jipipe.api.run.JIPipeProjectRunSet

JIPipeProjectRunSetsConfiguration - Class in org.hkijena.jipipe.api.project

JIPipeProjectRunSetsConfiguration() - Constructor for class org.hkijena.jipipe.api.project.JIPipeProjectRunSetsConfiguration

JIPipeProjectRunSetsConfiguration.RunSetsModifiedEvent - Class in org.hkijena.jipipe.api.project

JIPipeProjectRunSetsConfiguration.RunSetsModifiedEventEmitter - Class in org.hkijena.jipipe.api.project

JIPipeProjectRunSetsConfiguration.RunSetsModifiedEventListener - Interface in org.hkijena.jipipe.api.project

JIPipeProjectSettingsRegistry - Class in org.hkijena.jipipe.api.registries

Registry for project settings.

JIPipeProjectSettingsRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeProjectSettingsRegistry

JIPipeProjectSettingsSheet - Interface in org.hkijena.jipipe.api.settings

A settings sheet used for storing project-related settings

JIPipeProjectTemplate - Class in org.hkijena.jipipe.api.project

A reference to a template project

JIPipeProjectTemplate(String, JsonNode, JIPipeProjectMetadata, Path, Path) - Constructor for class org.hkijena.jipipe.api.project.JIPipeProjectTemplate

JIPipeProjectTemplateRegistry - Class in org.hkijena.jipipe.api.registries

JIPipeProjectTemplateRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry

JIPipeProjectTemplateRegistry.TemplatesUpdatedEvent - Class in org.hkijena.jipipe.api.registries

JIPipeProjectTemplateRegistry.TemplatesUpdatedEventEmitter - Class in org.hkijena.jipipe.api.registries

JIPipeProjectTemplateRegistry.TemplatesUpdatedEventListener - Interface in org.hkijena.jipipe.api.registries

JIPipePythonAdapterLibraryEnvironment - Class in org.hkijena.jipipe.plugins.python.adapter

Environment that supplies the JIPipe Python adapter library

JIPipePythonAdapterLibraryEnvironment() - Constructor for class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonAdapterLibraryEnvironment

JIPipePythonAdapterLibraryEnvironment(PythonPackageLibraryEnvironment) - Constructor for class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonAdapterLibraryEnvironment

JIPipePythonAdapterLibraryEnvironment.List - Class in org.hkijena.jipipe.plugins.python.adapter

A list of JIPipePythonAdapterLibraryEnvironment

JIPipePythonPluginAdapterApplicationSettings - Class in org.hkijena.jipipe.plugins.python.adapter

JIPipePythonPluginAdapterApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonPluginAdapterApplicationSettings

JIPipeReadDataStorage - Interface in org.hkijena.jipipe.api.data.storage

JIPipeDataStorage that is used for reading files into a JIPipeData instance.

JIPipeRecentProjectsRegistry - Class in org.hkijena.jipipe.api.registries

JIPipeRecentProjectsRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeRecentProjectsRegistry

JIPipeRecentProjectsRegistry.ChangedEvent - Class in org.hkijena.jipipe.api.registries

JIPipeRecentProjectsRegistry.ChangedEventEmitter - Class in org.hkijena.jipipe.api.registries

JIPipeRecentProjectsRegistry.ChangedEventListener - Interface in org.hkijena.jipipe.api.registries

JIPipeReflectionParameterAccess - Class in org.hkijena.jipipe.api.parameters

JIPipeParameterAccess generated from reflection

JIPipeReflectionParameterAccess() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

JIPipeReflectionParameterCollectionContextAction - Class in org.hkijena.jipipe.api.parameters

JIPipeReflectionParameterCollectionContextAction(Object, Method, URL, SetJIPipeDocumentation) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterCollectionContextAction

JIPipeRegistryIssues - Class in org.hkijena.jipipe

Class that describes issues with the current registration process

JIPipeRegistryIssues() - Constructor for class org.hkijena.jipipe.JIPipeRegistryIssues

JIPipeRemoteArtifact - Class in org.hkijena.jipipe.api.artifacts

JIPipeRemoteArtifact() - Constructor for class org.hkijena.jipipe.api.artifacts.JIPipeRemoteArtifact

JIPipeRemoteArtifact(JIPipeRemoteArtifact) - Constructor for class org.hkijena.jipipe.api.artifacts.JIPipeRemoteArtifact

JIPipeResourceManager - Class in org.hkijena.jipipe.utils

Simplifies the access to resources for extensions

JIPipeResourceManager(Class<?>, String, String, String, String, String, String, String, String, String, String, String) - Constructor for class org.hkijena.jipipe.utils.JIPipeResourceManager

Creates a new instance

JIPipeResourceManager(Class<?>, String) - Constructor for class org.hkijena.jipipe.utils.JIPipeResourceManager

Creates a new resource manager with the following settings: icons 16x16 path: [basePath]/icons icons 32x32 path: [basePath]/icons-32 dark icons 16x16 path: [basePath]/dark/icons dark icons 32x32 path: [basePath]/dark/icons-32 templates path: [basePath]/templates schemas path: [basePath]/schemas

JIPipeResultCopyFilesByMetadataExporterRun - Class in org.hkijena.jipipe.desktop.app.resultanalysis

JIPipeResultCopyFilesByMetadataExporterRun(JIPipeDesktopWorkbench, List<JIPipeDataSlot>, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun

JIPipeResultSlotDataSource - Class in org.hkijena.jipipe.api.data.sources

Data from a slot inside a result folder

JIPipeResultSlotDataSource(JIPipeDataSlot, JIPipeDataTableRowInfo, Path) - Constructor for class org.hkijena.jipipe.api.data.sources.JIPipeResultSlotDataSource

JIPipeRewireGraphEditorTool - Class in org.hkijena.jipipe.api.grapheditortool

JIPipeRewireGraphEditorTool() - Constructor for class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

JIPipeRunAlgorithmCommand - Class in org.hkijena.jipipe

Runs a JIPipe algorithm on a single data set.

JIPipeRunAlgorithmCommand() - Constructor for class org.hkijena.jipipe.JIPipeRunAlgorithmCommand

JIPipeRunCommand - Class in org.hkijena.jipipe

Command that runs a JIPipe project without GUI

JIPipeRunCommand() - Constructor for class org.hkijena.jipipe.JIPipeRunCommand

JIPipeRunnable - Interface in org.hkijena.jipipe.api.run

Runnable that can be scheduled, canceled, and reports progress

JIPipeRunnable.EnqeuedEventListener - Interface in org.hkijena.jipipe.api.run

JIPipeRunnable.EnqueuedEvent - Class in org.hkijena.jipipe.api.run

Generated when an JIPipeRunnableWorker was enqueued

JIPipeRunnable.EnqueuedEventEmitter - Class in org.hkijena.jipipe.api.run

JIPipeRunnable.FinishedEvent - Class in org.hkijena.jipipe.api.run

Generated when an JIPipeRunnableWorker finished its work

JIPipeRunnable.FinishedEventEmitter - Class in org.hkijena.jipipe.api.run

JIPipeRunnable.FinishedEventListener - Interface in org.hkijena.jipipe.api.run

JIPipeRunnable.InterruptedEvent - Class in org.hkijena.jipipe.api.run

Generated when work of an JIPipeRunnableWorker is interrupted

JIPipeRunnable.InterruptedEventEmitter - Class in org.hkijena.jipipe.api.run

JIPipeRunnable.InterruptedEventListener - Interface in org.hkijena.jipipe.api.run

JIPipeRunnable.ProgressEvent - Class in org.hkijena.jipipe.api.run

Generated when an JIPipeRunnableWorker reports progress

JIPipeRunnable.ProgressEventEmitter - Class in org.hkijena.jipipe.api.run

JIPipeRunnable.ProgressEventListener - Interface in org.hkijena.jipipe.api.run

JIPipeRunnable.StartedEvent - Class in org.hkijena.jipipe.api.run

Generated when an JIPipeRunnableWorker was started

JIPipeRunnable.StartedEventEmitter - Class in org.hkijena.jipipe.api.run

JIPipeRunnable.StartedEventListener - Interface in org.hkijena.jipipe.api.run

JIPipeRunnableLogEntry - Class in org.hkijena.jipipe.api.run

JIPipeRunnableLogEntry(String, LocalDateTime, String, JIPipeNotificationInbox, boolean) - Constructor for class org.hkijena.jipipe.api.run.JIPipeRunnableLogEntry

JIPipeRunnableQueue - Class in org.hkijena.jipipe.api.run

Local queue for JIPipeRunnable

JIPipeRunnableQueue(String) - Constructor for class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

JIPipeRunnableWorker - Class in org.hkijena.jipipe.api.run

Wraps a JIPipeRunnable into a Swing worker for multithreaded runs

JIPipeRunnableWorker(JIPipeRunnable, boolean) - Constructor for class org.hkijena.jipipe.api.run.JIPipeRunnableWorker

JIPipeRuntimeApplicationSettings - Class in org.hkijena.jipipe.plugins.settings

Settings related to how algorithms are executed

JIPipeRuntimeApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

Creates a new instance

JIPipeRuntimePartition - Class in org.hkijena.jipipe.api.runtimepartitioning

JIPipeRuntimePartition() - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

JIPipeRuntimePartition(JIPipeRuntimePartition) - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

JIPipeRuntimePartition.ContinueOnFailureSettings - Class in org.hkijena.jipipe.api.runtimepartitioning

JIPipeRuntimePartition.OutputSettings - Class in org.hkijena.jipipe.api.runtimepartitioning

JIPipeRuntimePartitionConfiguration - Class in org.hkijena.jipipe.api.runtimepartitioning

JIPipeRuntimePartitionConfiguration() - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration

JIPipeSerializedJsonObjectData - Class in org.hkijena.jipipe.api.data.utils

A base class for JIPipeData that is serialized from/to JSON for convenience Ensure that this data type has a copy constructor for the duplicate() function.

JIPipeSerializedJsonObjectData() - Constructor for class org.hkijena.jipipe.api.data.utils.JIPipeSerializedJsonObjectData

JIPipeSerializedJsonObjectData(JIPipeSerializedJsonObjectData) - Constructor for class org.hkijena.jipipe.api.data.utils.JIPipeSerializedJsonObjectData

JIPipeSerializedParameterCollectionData - Class in org.hkijena.jipipe.api.data.utils

A base class for JIPipeData that is serialized from/to JSON for convenience Only valid JIPipeParameter definitions are stored.

JIPipeSerializedParameterCollectionData() - Constructor for class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData

JIPipeSerializedParameterCollectionData(JIPipeSerializedParameterCollectionData) - Constructor for class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData

JIPipeSerializedParameterCollectionData.Deserializer - Class in org.hkijena.jipipe.api.data.utils

JIPipeSerializedParameterCollectionData.Serializer - Class in org.hkijena.jipipe.api.data.utils

JIPipeService - Interface in org.hkijena.jipipe

Contains all JIPipe resources

JIPipeService.DatatypeRegisteredEvent - Class in org.hkijena.jipipe

Triggered when a new data type is registered

JIPipeService.DatatypeRegisteredEventEmitter - Class in org.hkijena.jipipe

JIPipeService.DatatypeRegisteredEventListener - Interface in org.hkijena.jipipe

JIPipeService.ExtensionContentAddedEvent - Class in org.hkijena.jipipe

Generated when content is added to an JIPipeJsonPlugin

JIPipeService.ExtensionContentAddedEventEmitter - Class in org.hkijena.jipipe

JIPipeService.ExtensionContentRemovedEvent - Class in org.hkijena.jipipe

Generated when content is removed from an JIPipeJsonPlugin

JIPipeService.ExtensionContentRemovedEventEmitter - Class in org.hkijena.jipipe

JIPipeService.ExtensionDiscoveredEvent - Class in org.hkijena.jipipe

Triggered when a new extension was discovered

JIPipeService.ExtensionDiscoveredEventEmitter - Class in org.hkijena.jipipe

JIPipeService.ExtensionRegisteredEvent - Class in org.hkijena.jipipe

Triggered by JIPipeService when an extension is registered

JIPipeService.ExtensionRegisteredEventEmitter - Class in org.hkijena.jipipe

JIPipeService.NodeInfoRegisteredEvent - Class in org.hkijena.jipipe

Triggered when an algorithm is registered

JIPipeService.NodeInfoRegisteredEventEmitter - Class in org.hkijena.jipipe

JIPipeService.NodeInfoRegisteredEventListener - Interface in org.hkijena.jipipe

JIPipeService.PluginContentAddedEventListener - Interface in org.hkijena.jipipe

JIPipeService.PluginContentRemovedEventListener - Interface in org.hkijena.jipipe

JIPipeService.PluginDiscoveredEventListener - Interface in org.hkijena.jipipe

JIPipeService.PluginRegisteredEventListener - Interface in org.hkijena.jipipe

JIPipeSettingsSheet - Interface in org.hkijena.jipipe.api.settings

A settings sheet

JIPipeSimpleIteratingAlgorithm - Class in org.hkijena.jipipe.api.nodes.algorithm

An JIPipeAlgorithm that iterates through each data row.

JIPipeSimpleIteratingAlgorithm(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

Creates a new instance

JIPipeSimpleIteratingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

Creates a new instance

JIPipeSimpleIteratingAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

Copies the algorithm

JIPipeSimpleIteratingAlgorithmIterationStepGenerationSettings - Class in org.hkijena.jipipe.api.nodes.algorithm

JIPipeSimpleIteratingAlgorithmIterationStepGenerationSettings() - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithmIterationStepGenerationSettings

JIPipeSimpleIteratingAlgorithmIterationStepGenerationSettings(JIPipeSimpleIteratingAlgorithmIterationStepGenerationSettings) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithmIterationStepGenerationSettings

JIPipeSingleIterationAlgorithm - Class in org.hkijena.jipipe.api.nodes.algorithm

An JIPipeAlgorithm that applies a single iteration with a iteration step containing all data.

JIPipeSingleIterationAlgorithm(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm

Creates a new instance

JIPipeSingleIterationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm

Creates a new instance

JIPipeSingleIterationAlgorithm(JIPipeSingleIterationAlgorithm) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm

Copies the algorithm

JIPipeSingleIterationAlgorithmIterationStepGenerationSettings - Class in org.hkijena.jipipe.api.nodes.algorithm

JIPipeSingleIterationAlgorithmIterationStepGenerationSettings() - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithmIterationStepGenerationSettings

JIPipeSingleIterationAlgorithmIterationStepGenerationSettings(JIPipeSingleIterationAlgorithmIterationStepGenerationSettings) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithmIterationStepGenerationSettings

JIPipeSingleIterationStep - Class in org.hkijena.jipipe.api.nodes.iterationstep

Wraps a set of input and output slots that belong together This can be used for convenience

JIPipeSingleIterationStep(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Creates a new interface

JIPipeSingleIterationStep(JIPipeSingleIterationStep) - Constructor for class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Creates a copy

JIPipeSlotConfiguration - Interface in org.hkijena.jipipe.api.data

A slot configuration determines which slots an JIPipeGraphNode should have.

JIPipeSlotConfiguration.Serializer - Class in org.hkijena.jipipe.api.data

Serializes the configuration

JIPipeSlotConfiguration.SlotConfigurationChangedEvent - Class in org.hkijena.jipipe.api.data

Triggered when a JIPipeSlotConfiguration was changed

JIPipeSlotConfiguration.SlotConfigurationChangedEventEmitter - Class in org.hkijena.jipipe.api.data

JIPipeSlotConfiguration.SlotConfigurationChangedEventListener - Interface in org.hkijena.jipipe.api.data

JIPipeSlotType - Enum in org.hkijena.jipipe.api.data

The slot type

JIPipeStandardMetadata - Class in org.hkijena.jipipe.api

JSON-serializable project metadata

JIPipeStandardMetadata() - Constructor for class org.hkijena.jipipe.api.JIPipeStandardMetadata

Creates new empty instance

JIPipeStandardMetadata(JIPipeStandardMetadata) - Constructor for class org.hkijena.jipipe.api.JIPipeStandardMetadata

Copies metadata

JIPipeTableViewerUIApplicationSettings - Class in org.hkijena.jipipe.plugins.settings

JIPipeTableViewerUIApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeTableViewerUIApplicationSettings

JIPipeTextAnnotation - Class in org.hkijena.jipipe.api.annotation

A single annotation

JIPipeTextAnnotation() - Constructor for class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

Creates an empty instance

JIPipeTextAnnotation(String, String) - Constructor for class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

Initializes a new instance

JIPipeTextAnnotation(String, Collection<String>) - Constructor for class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

Creates a new instance from an array.

JIPipeTextAnnotation(String, String[]) - Constructor for class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

Creates a new instance from an array.

JIPipeTextAnnotationMatchingMethod - Enum in org.hkijena.jipipe.api.nodes

JIPipeTextAnnotationMergeMode - Enum in org.hkijena.jipipe.api.annotation

Determines how annotations are merged

JIPipeTextAnnotationsExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.expressions.variables

Adds the indication that annotations are available

JIPipeTextAnnotationsExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.expressions.variables.JIPipeTextAnnotationsExpressionParameterVariablesInfo

JIPipeTextThumbnailData - Class in org.hkijena.jipipe.api.data.thumbnails

JIPipeTextThumbnailData(String) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData

JIPipeTextThumbnailData(JIPipeTextThumbnailData) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData

JIPipeThumbnailData - Interface in org.hkijena.jipipe.api.data.thumbnails

JIPipeThumbnailGenerationQueue - Class in org.hkijena.jipipe.api.data.thumbnails

JIPipeThumbnailGenerationQueue() - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue

JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEvent - Class in org.hkijena.jipipe.api.data.thumbnails

JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEventEmitter - Class in org.hkijena.jipipe.api.data.thumbnails

JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEventListener - Interface in org.hkijena.jipipe.api.data.thumbnails

JIPipeThumbnailGenerationQueue.ThumbnailGenerationRun - Class in org.hkijena.jipipe.api.data.thumbnails

JIPipeToggleableGraphEditorTool - Interface in org.hkijena.jipipe.api.grapheditortool

JIPipeUtilityRegistry - Class in org.hkijena.jipipe.api.registries

A registry of additional utilities (e.g., installers for external environments)

JIPipeUtilityRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeUtilityRegistry

JIPipeUtils - Class in org.hkijena.jipipe.utils

JIPipeUtils() - Constructor for class org.hkijena.jipipe.utils.JIPipeUtils

JIPipeValidatable - Interface in org.hkijena.jipipe.api.validation

An interface about a type that reports of the validity of its internal state

JIPipeValidationReport - Class in org.hkijena.jipipe.api.validation

Report about the validity of an object, usually a JIPipeValidatable

JIPipeValidationReport() - Constructor for class org.hkijena.jipipe.api.validation.JIPipeValidationReport

Creates a new report instance

JIPipeValidationReportContext - Class in org.hkijena.jipipe.api.validation

JIPipeValidationReportContext() - Constructor for class org.hkijena.jipipe.api.validation.JIPipeValidationReportContext

JIPipeValidationReportContext(JIPipeValidationReportContext) - Constructor for class org.hkijena.jipipe.api.validation.JIPipeValidationReportContext

JIPipeValidationReportEntry - Class in org.hkijena.jipipe.api.validation

A validity report message

JIPipeValidationReportEntry(JIPipeValidationReportEntryLevel, JIPipeValidationReportContext, String, String, String, String) - Constructor for class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry

JIPipeValidationReportEntry(JIPipeValidationReportEntryLevel, JIPipeValidationReportContext, String, String, String) - Constructor for class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry

JIPipeValidationReportEntry(JIPipeValidationReportEntryLevel, JIPipeValidationReportContext, String, String) - Constructor for class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry

JIPipeValidationReportEntryLevel - Enum in org.hkijena.jipipe.api.validation

JIPipeValidationRuntimeException - Exception in org.hkijena.jipipe.api.validation

JIPipeValidationRuntimeException(JIPipeValidationReport) - Constructor for exception org.hkijena.jipipe.api.validation.JIPipeValidationRuntimeException

JIPipeValidationRuntimeException(JIPipeValidationReportEntry) - Constructor for exception org.hkijena.jipipe.api.validation.JIPipeValidationRuntimeException

JIPipeValidationRuntimeException(Throwable, String, String, String) - Constructor for exception org.hkijena.jipipe.api.validation.JIPipeValidationRuntimeException

JIPipeValidationRuntimeException(JIPipeValidationReportContext, Throwable, String, String, String) - Constructor for exception org.hkijena.jipipe.api.validation.JIPipeValidationRuntimeException

JIPipeWeakDataReferenceData - Class in org.hkijena.jipipe.api.data.utils

A helper data type that weakly references other data

JIPipeWeakDataReferenceData(JIPipeData) - Constructor for class org.hkijena.jipipe.api.data.utils.JIPipeWeakDataReferenceData

JIPipeWeakDataTableDataSource - Class in org.hkijena.jipipe.api.data.sources

A JIPipeDataSource

JIPipeWeakDataTableDataSource(JIPipeDataTable, int) - Constructor for class org.hkijena.jipipe.api.data.sources.JIPipeWeakDataTableDataSource

JIPipeWeakDataTableDataSource(JIPipeDataTable, int, String) - Constructor for class org.hkijena.jipipe.api.data.sources.JIPipeWeakDataTableDataSource

JIPipeWorkbench - Interface in org.hkijena.jipipe.api

Interface shared by all workbench UIs

JIPipeWorkbenchAccess - Interface in org.hkijena.jipipe.api

Interface for any class that needs access to a JIPipeWorkbench

JIPipeWriteDataStorage - Interface in org.hkijena.jipipe.api.data.storage

JIPipeDataStorage that is used for writing a JIPipeData.

JIPipeZIPReadDataStorage - Class in org.hkijena.jipipe.api.data.storage

A storage the reads a ZIP file

JIPipeZIPReadDataStorage(JIPipeProgressInfo, Path) - Constructor for class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage

JIPipeZIPWriteDataStorage - Class in org.hkijena.jipipe.api.data.storage

A storage that creates a ZIP file

JIPipeZIPWriteDataStorage(JIPipeProgressInfo, Path) - Constructor for class org.hkijena.jipipe.api.data.storage.JIPipeZIPWriteDataStorage

jogAmpToSciJava(List<Point3f>) - Static method in class org.hkijena.jipipe.plugins.ij3d.IJ3DUtils

JsonAlgorithm - Class in org.hkijena.jipipe.api.grouping

An algorithm that was imported from a Json extension.

JsonAlgorithm(JsonNodeInfo) - Constructor for class org.hkijena.jipipe.api.grouping.JsonAlgorithm

Creates a new instance

JsonAlgorithm(JIPipeGraphWrapperAlgorithm) - Constructor for class org.hkijena.jipipe.api.grouping.JsonAlgorithm

Makes a copy

JsonAlgorithmToGroupNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

JsonAlgorithmToGroupNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.JsonAlgorithmToGroupNodeUIContextAction

JsonData - Class in org.hkijena.jipipe.plugins.strings

JsonData(String) - Constructor for class org.hkijena.jipipe.plugins.strings.JsonData

JsonData(StringData) - Constructor for class org.hkijena.jipipe.plugins.strings.JsonData

JsonDeserializable - Interface in org.hkijena.jipipe.utils.json

Allows the object to be deserialized in-place from JSON data

JsonExtensionLoaderPlugin - Class in org.hkijena.jipipe.plugins.jsonextensionloader

Extension that loads JIPipeJsonPlugin

JsonExtensionLoaderPlugin() - Constructor for class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionLoaderPlugin

JsonExtensionRegistrationTask - Class in org.hkijena.jipipe.plugins.jsonextensionloader

Registers a JIPipeJsonPlugin

JsonExtensionRegistrationTask(JIPipe, Path, JsonNode) - Constructor for class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionRegistrationTask

jsonify(String) - Static method in class org.hkijena.jipipe.utils.StringUtils

Removes all spaces, and filesystem-unsafe characters from the string and replaces them with dashes Duplicate dashes are removed

JsonNodeInfo - Class in org.hkijena.jipipe.api.grouping

Info of a JIPipeGraphWrapperAlgorithm

JsonNodeInfo() - Constructor for class org.hkijena.jipipe.api.grouping.JsonNodeInfo

Creates a new info

JsonNodeInfo(JIPipeNodeGroup) - Constructor for class org.hkijena.jipipe.api.grouping.JsonNodeInfo

Creates a new info from a JIPipeNodeGroup

JsonNodeInfoValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts

JsonNodeInfoValidationReportContext(JsonNodeInfo) - Constructor for class org.hkijena.jipipe.api.validation.contexts.JsonNodeInfoValidationReportContext

JsonNodeInfoValidationReportContext(JIPipeValidationReportContext, JsonNodeInfo) - Constructor for class org.hkijena.jipipe.api.validation.contexts.JsonNodeInfoValidationReportContext

JsonNodeRegistrationTask - Class in org.hkijena.jipipe.api.grouping

Registers a JsonNodeInfo

JsonNodeRegistrationTask(JsonNode, JIPipeJsonPlugin) - Constructor for class org.hkijena.jipipe.api.grouping.JsonNodeRegistrationTask

jsonStringToObject(String, Class<T>) - Static method in class org.hkijena.jipipe.utils.SerializationUtils

Deserailizes a JSON string into an object via Jackson

jsonStringToParameterCollection(JIPipeParameterCollection, String) - Static method in class org.hkijena.jipipe.utils.SerializationUtils

Deserializes JSON data into a JIPipeParameterCollection

JsonUtils - Class in org.hkijena.jipipe.utils.json

Global utilities for JSON data

JythonScriptAlgorithm - Class in org.hkijena.jipipe.plugins.python.algorithms.jython

An algorithm that allows to run Python code

JythonScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.python.algorithms.jython.JythonScriptAlgorithm

Creates a new instance

JythonScriptAlgorithm(JythonScriptAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.python.algorithms.jython.JythonScriptAlgorithm

Creates a copy

JythonScriptFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.scripts

JythonScriptFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.scripts.JythonScriptFunction

JythonUtils - Class in org.hkijena.jipipe.utils.scripting

Utilities for Jython

K

KeepLargestLabelAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

KeepLargestLabelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.KeepLargestLabelAlgorithm

KeepLargestLabelAlgorithm(KeepLargestLabelAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.KeepLargestLabelAlgorithm

KeepLargestRegionAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary

KeepLargestRegionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.KeepLargestRegionAlgorithm

Instantiates a new node type.

KeepLargestRegionAlgorithm(KeepLargestRegionAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.KeepLargestRegionAlgorithm

Instantiates a new node type.

KERNEL_4 - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm

KERNEL_4_INV - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm

KERNEL_8 - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm

KERNEL_8_INV - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm

key - Variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ConcaveHullMoreiraSantos.Pair

KEY_STROKE_MOVE_SELECTION_DOWN - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

KEY_STROKE_MOVE_SELECTION_LEFT - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

KEY_STROKE_MOVE_SELECTION_RIGHT - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

KEY_STROKE_MOVE_SELECTION_UP - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

KEY_STROKE_REDO - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

KEY_STROKE_UNDO - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

KEY_STROKE_ZOOM_IN - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

KEY_STROKE_ZOOM_OUT - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

KEY_STROKE_ZOOM_RESET - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

KeyDeserializer() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataInfo.KeyDeserializer

keyStrokeToString(KeyStroke) - Static method in class org.hkijena.jipipe.utils.UIUtils

keyToVariable(String) - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotFeatureVariablesInfo

keyToVariable(String) - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackFeatureVariablesInfo

KeyValueAveragesGenerator - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics

KeyValueAveragesGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator

KeyValueAveragesGenerator(KeyValueAveragesGenerator) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator

KeyValueHistogramGenerator - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics

KeyValueHistogramGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator

KeyValueHistogramGenerator(KeyValueHistogramGenerator) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator

KeyValueThresholdPartitionAveragesGenerator - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics

KeyValueThresholdPartitionAveragesGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

KeyValueThresholdPartitionAveragesGenerator(KeyValueThresholdPartitionAveragesGenerator) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

KeyValueThresholdPartitionGenerator - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics

KeyValueThresholdPartitionGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator

KeyValueThresholdPartitionGenerator(KeyValueThresholdPartitionGenerator) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator

KeyValueThresholdPartitionGenerator.GeneratedColumn - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics

KeyValueThresholdStatisticsGenerator - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics

KeyValueThresholdStatisticsGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator

KeyValueThresholdStatisticsGenerator(KeyValueThresholdStatisticsGenerator) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator

killProcessTree(long, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.ProcessUtils

KMeansClusteringAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.statistics

KMeansClusteringAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm

KMeansClusteringAlgorithm(KMeansClusteringAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm

KMeansClusteringAlgorithm.ClusteringSettings - Class in org.hkijena.jipipe.plugins.tables.nodes.statistics

KMeansClusteringAlgorithm.OutputSettings - Class in org.hkijena.jipipe.plugins.tables.nodes.statistics

KNOWN_PATH_TYPES - Static variable in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNext

KNOWN_UNITS - Static variable in class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

KNOWN_UNITS_IMAGE_DIMENSIONS - Static variable in class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

L

l1Norm(List<Double>) - Static method in class org.hkijena.jipipe.utils.VectorUtils

l2Norm(List<Double>) - Static method in class org.hkijena.jipipe.utils.VectorUtils

LABBlueYellowTrackBackground - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

LABBlueYellowTrackBackground() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LABBlueYellowTrackBackground

LABColorSpace - Class in org.hkijena.jipipe.plugins.imagejdatatypes.colorspace

LABColorSpace() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.LABColorSpace

LabelAsJIPipeCommonData - Annotation Type in org.hkijena.jipipe.api

Annotates a data type as common/preferred.

LabelAsJIPipeHeavyData - Annotation Type in org.hkijena.jipipe.api

Annotates a JIPipeData type as being "heavy" (large file size).

LabelAsJIPipeHidden - Annotation Type in org.hkijena.jipipe.api

Marks a class as hidden

LabelChamferDistanceMap3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap

LabelChamferDistanceMap3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.LabelChamferDistanceMap3DAlgorithm

Instantiates a new node type.

LabelChamferDistanceMap3DAlgorithm(LabelChamferDistanceMap3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.LabelChamferDistanceMap3DAlgorithm

Instantiates a new node type.

LabelColorMapEnumItemInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

EnumItemInfo implementation for ColorMap

LabelColorMapEnumItemInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelColorMapEnumItemInfo

Creates a new instance

LabelColorMapIcon - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

Icon that renders a color map entry

LabelColorMapIcon() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelColorMapIcon

Creates a 16x16 black icon

LabelColorMapIcon(int, int) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelColorMapIcon

Creates a viridis icon

LabelColorMapIcon(int, int, ColorMaps.CommonLabelMaps) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelColorMapIcon

LabelConnectedComponents - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

LabelFilterSettings() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings

LabelFilterSettings(FilterLabelsByOverlapAlgorithm.LabelFilterSettings) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings

LabelledImage(ImagePlus, Map<ImageSliceIndex, String>, String) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelledImage

LabelOverlapStatisticsVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

LabelOverlapStatisticsVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelOverlapStatisticsVariablesInfo

LabelParameters() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelParameters

LabelParameters(MontageCreator.LabelParameters) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelParameters

LABELS_IMAGE_OUTPUT_SLOT - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm

LabelSettings() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer.LabelSettings

LabelSettings(SpotDrawer.LabelSettings) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer.LabelSettings

LabelsToMaskAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

LabelsToMaskAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToMaskAlgorithm

LabelsToMaskAlgorithm(LabelsToMaskAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToMaskAlgorithm

LabelsToRGBAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

LabelsToRGBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToRGBAlgorithm

LabelsToRGBAlgorithm(LabelsToRGBAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToRGBAlgorithm

LabelsToROIAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

LabelsToROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm

LabelsToROIAlgorithm(LabelsToROIAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm

LabelsToROIAlgorithm.Method - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

LabelsToROIAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

LABGreenRedTrackBackground - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

LABGreenRedTrackBackground() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LABGreenRedTrackBackground

LABLightnessTrackBackground - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

LABLightnessTrackBackground() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LABLightnessTrackBackground

LABToHSBFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.color

LABToHSBFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.color.LABToHSBFunction

LABToRGBFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.color

LABToRGBFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.color.LABToRGBFunction

LambdaSubscriber(BiConsumer<JIPipeEventEmitter<Event, Listener>, Event>, boolean) - Constructor for class org.hkijena.jipipe.api.events.JIPipeEventEmitter.LambdaSubscriber

LANGUAGES - Static variable in class org.hkijena.jipipe.plugins.ijocr.utils.TesseractLanguagesSupplier

LaplacianEdgeDetectorAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge

Wrapper around ImageProcessor

LaplacianEdgeDetectorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm

Instantiates a new node type.

LaplacianEdgeDetectorAlgorithm(LaplacianEdgeDetectorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm

Instantiates a new node type.

LaplacianEdgeDetectorAlgorithm.Mode - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge

LaplacianOfGaussian2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

Based on code by Dimiter Prodanov ...

LaplacianOfGaussian2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LaplacianOfGaussian2DAlgorithm

Instantiates a new node type.

LaplacianOfGaussian2DAlgorithm(LaplacianOfGaussian2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LaplacianOfGaussian2DAlgorithm

LaplacianSharpen2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.sharpen

Wrapper around ImageProcessor

LaplacianSharpen2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.sharpen.LaplacianSharpen2DAlgorithm

Instantiates a new node type.

LaplacianSharpen2DAlgorithm(LaplacianSharpen2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.sharpen.LaplacianSharpen2DAlgorithm

Instantiates a new node type.

LargeScriptDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.scripts

An editor for ScriptParameter

LargeScriptDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.scripts.LargeScriptDesktopParameterEditorUI

lastIndexOf(Object) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

lastIndexOf(Object) - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

LastIndexOfFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

LastIndexOfFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.LastIndexOfFunction

launch(CommandLine, Map<String, String>, File) - Method in class org.hkijena.jipipe.utils.ProcessUtils.ExtendedExecutor

launchIlastik(JIPipeDesktopWorkbench, List<String>) - Static method in class org.hkijena.jipipe.plugins.ilastik.IlastikPlugin

launchNapari(JIPipeDesktopWorkbench, List<String>, boolean) - Static method in class org.hkijena.jipipe.plugins.napari.NapariPlugin

launchNapari(JIPipeDesktopWorkbench, List<String>, JIPipeProgressInfo, boolean) - Static method in class org.hkijena.jipipe.plugins.napari.NapariPlugin

launchProcess(ProcessEnvironment, JIPipeExpressionVariablesMap, Map<String, String>, boolean, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.ProcessUtils

Runs a process detached

LEFT_RIGHT - Static variable in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane

LegacyApplyMath2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Deprecated.

LegacyApplyMath2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyApplyMath2DAlgorithm

Deprecated.

Instantiates a new node type.

LegacyApplyMath2DAlgorithm(LegacyApplyMath2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyApplyMath2DAlgorithm

Deprecated.

Instantiates a new node type.

LegacyApplyMath2DAlgorithm.Transformation - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Deprecated.

Available transformation functions

LegacyCellpose2InferenceAlgorithm - Class in org.hkijena.jipipe.plugins.cellpose.legacy.algorithms

Deprecated.

LegacyCellpose2InferenceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

LegacyCellpose2InferenceAlgorithm(LegacyCellpose2InferenceAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

LegacyCellpose2TrainingAlgorithm - Class in org.hkijena.jipipe.plugins.cellpose.legacy.algorithms

Deprecated.

LegacyCellpose2TrainingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

LegacyCellpose2TrainingAlgorithm(LegacyCellpose2TrainingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

LegacyCellposeModelData - Class in org.hkijena.jipipe.plugins.cellpose.legacy.datatypes

Deprecated.

LegacyCellposeModelData(Path) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.datatypes.LegacyCellposeModelData

Deprecated.

LegacyCellposeModelData(byte[], String) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.datatypes.LegacyCellposeModelData

Deprecated.

LegacyCellposeModelData(LegacyCellposeModelData) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.datatypes.LegacyCellposeModelData

Deprecated.

LegacyCellposeModelImageJExporter - Class in org.hkijena.jipipe.plugins.cellpose.legacy.compat

LegacyCellposeModelImageJExporter() - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.compat.LegacyCellposeModelImageJExporter

LegacyCellposeModelImageJImporter - Class in org.hkijena.jipipe.plugins.cellpose.legacy.compat

LegacyCellposeModelImageJImporter() - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.compat.LegacyCellposeModelImageJImporter

LegacyCellposeSizeModelData - Class in org.hkijena.jipipe.plugins.cellpose.legacy.datatypes

Deprecated.

LegacyCellposeSizeModelData(Path) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.datatypes.LegacyCellposeSizeModelData

Deprecated.

LegacyCellposeSizeModelData(byte[], String) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.datatypes.LegacyCellposeSizeModelData

Deprecated.

LegacyCellposeSizeModelData(LegacyCellposeSizeModelData) - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.datatypes.LegacyCellposeSizeModelData

Deprecated.

LegacyCellposeSizeModelImageJExporter - Class in org.hkijena.jipipe.plugins.cellpose.legacy.compat

LegacyCellposeSizeModelImageJExporter() - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.compat.LegacyCellposeSizeModelImageJExporter

LegacyCellposeSizeModelImageJImporter - Class in org.hkijena.jipipe.plugins.cellpose.legacy.compat

LegacyCellposeSizeModelImageJImporter() - Constructor for class org.hkijena.jipipe.plugins.cellpose.legacy.compat.LegacyCellposeSizeModelImageJImporter

LegacyHoughLines - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

Adapted from HoughTransform

LegacyHoughLines(int, int) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines

LegacyHoughLines.HoughLine - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

Represents a linear line as detected by the hough transform.

LegacyImageCalculator2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Deprecated.

LegacyImageCalculator2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DAlgorithm

Deprecated.

Instantiates a new node type.

LegacyImageCalculator2DAlgorithm(LegacyImageCalculator2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DAlgorithm

Deprecated.

Instantiates a new node type.

LegacyImageCalculator2DAlgorithm.Operand - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Deprecated.

Determines the order of input images

LegacyImageCalculator2DAlgorithm.Operation - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Deprecated.

Available math operations

LegacyImageCalculator2DMergingAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Deprecated.

LegacyImageCalculator2DMergingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DMergingAlgorithm

Deprecated.

Instantiates a new node type.

LegacyImageCalculator2DMergingAlgorithm(LegacyImageCalculator2DMergingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DMergingAlgorithm

Deprecated.

Instantiates a new node type.

LegacyImageViewer2DUIApplicationSettings - Class in org.hkijena.jipipe.plugins.imageviewer.settings

All settings for AbstractJIPipeDesktopGraphEditorUI

LegacyImageViewer2DUIApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.imageviewer.settings.LegacyImageViewer2DUIApplicationSettings

LegacyOmnipose0InferenceAlgorithm - Class in org.hkijena.jipipe.plugins.omnipose.legacy.algorithms

Deprecated.

LegacyOmnipose0InferenceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

LegacyOmnipose0InferenceAlgorithm(LegacyOmnipose0InferenceAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

LegacyOmnipose0Model - Enum in org.hkijena.jipipe.plugins.omnipose.legacy.parameters

Deprecated.

LegacyOmnipose0PretrainedModel - Enum in org.hkijena.jipipe.plugins.omnipose.legacy.parameters

Deprecated.

LegacyOmnipose0TrainingAlgorithm - Class in org.hkijena.jipipe.plugins.omnipose.legacy.algorithms

Deprecated.

LegacyOmnipose0TrainingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

LegacyOmnipose0TrainingAlgorithm(LegacyOmnipose0TrainingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

LengthFunction - Class in org.hkijena.jipipe.plugins.expressions.functions

LengthFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.LengthFunction

lerpColorValue(int, int, double) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils

LIGHT_GRAY - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

limitWithEllipsis(String, int, FontMetrics) - Static method in class org.hkijena.jipipe.utils.StringUtils

If the string is longer than maxWidth, limit it to fit within maxWidth with an ellipsis (...).

limitWithoutEllipsis(String, int, FontMetrics) - Static method in class org.hkijena.jipipe.utils.StringUtils

If the string is longer than maxWidth, limit it to fit within maxWidth with an ellipsis (...).

Line(Point, Point, double, double) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.HoughLineSegments.Line

LineCategoryJFreeChartPlotData - Class in org.hkijena.jipipe.plugins.plots.datatypes

Generates a bar category plot Series table columns: Value (Double), Category (String), Group (String) Multiple series: No

LineCategoryJFreeChartPlotData() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.LineCategoryJFreeChartPlotData

Creates a new instance

LineCategoryJFreeChartPlotData(LineCategoryJFreeChartPlotData) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.LineCategoryJFreeChartPlotData

Creates a copy

LineEndPoint() - Constructor for class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint

LineEndPoint(Scene3DLineGeometry.LineEndPoint) - Constructor for class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint

LineMirror - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

LineMirror() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LineMirror

LineMirror.MirrorOperationMode - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.utils

LineMirror2DFromExpressionsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

LineMirror2DFromExpressionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromExpressionsAlgorithm

LineMirror2DFromExpressionsAlgorithm(LineMirror2DFromExpressionsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromExpressionsAlgorithm

LineMirror2DFromRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

LineMirror2DFromRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromRoiAlgorithm

LineMirror2DFromRoiAlgorithm(LineMirror2DFromRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromRoiAlgorithm

LineSegmentsHoughDetection2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect

LineSegmentsHoughDetection2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

LineSegmentsHoughDetection2DAlgorithm(LineSegmentsHoughDetection2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

LinesHoughDetection2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect

LinesHoughDetection2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LinesHoughDetection2DAlgorithm

LinesHoughDetection2DAlgorithm(LinesHoughDetection2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LinesHoughDetection2DAlgorithm

LineStatisticalCategoryJFreeChartPlotData - Class in org.hkijena.jipipe.plugins.plots.datatypes

Generates a bar category plot Series table columns: Value (Double), Category (String), Group (String) Multiple series: No

LineStatisticalCategoryJFreeChartPlotData() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.LineStatisticalCategoryJFreeChartPlotData

Creates a new instance

LineStatisticalCategoryJFreeChartPlotData(LineStatisticalCategoryJFreeChartPlotData) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.LineStatisticalCategoryJFreeChartPlotData

Creates a copy

LineXYJFreeChartPlotData - Class in org.hkijena.jipipe.plugins.plots.datatypes

Generates a bar category plot Series table columns: X (Double), Y (Double) Multiple series: Yes

LineXYJFreeChartPlotData() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.LineXYJFreeChartPlotData

Creates a new instance

LineXYJFreeChartPlotData(LineXYJFreeChartPlotData) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.LineXYJFreeChartPlotData

Creates a copy

lInfinityNorm(List<Double>) - Static method in class org.hkijena.jipipe.utils.VectorUtils

list() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage

list() - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage

Lists the relative paths of all elements in this storage

list() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage

List() - Constructor for class org.hkijena.jipipe.api.JIPipeAuthorMetadata.List

Creates a new instance

List(JIPipeAuthorMetadata...) - Constructor for class org.hkijena.jipipe.api.JIPipeAuthorMetadata.List

List(Collection<JIPipeAuthorMetadata>) - Constructor for class org.hkijena.jipipe.api.JIPipeAuthorMetadata.List

Makes a copy

List() - Constructor for class org.hkijena.jipipe.api.JIPipeNodeTemplate.List

List(JIPipeNodeTemplate.List) - Constructor for class org.hkijena.jipipe.api.JIPipeNodeTemplate.List

List() - Constructor for class org.hkijena.jipipe.api.OptionalJIPipeAuthorMetadata.List

List(OptionalJIPipeAuthorMetadata.List) - Constructor for class org.hkijena.jipipe.api.OptionalJIPipeAuthorMetadata.List

List() - Constructor for class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency.List

List(JIPipeImageJUpdateSiteDependency.List) - Constructor for class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency.List

List() - Constructor for class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironment.List

List(JIPipeDataDirectoryEnvironment.List) - Constructor for class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironment.List

List() - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameter.List

List(Collection<JIPipeExpressionParameter>) - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameter.List

List() - Constructor for class org.hkijena.jipipe.plugins.expressions.NamedStringQueryExpression.List

List(NamedStringQueryExpression.List) - Constructor for class org.hkijena.jipipe.plugins.expressions.NamedStringQueryExpression.List

List() - Constructor for class org.hkijena.jipipe.plugins.expressions.NamedTextAnnotationGeneratorExpression.List

List(NamedTextAnnotationGeneratorExpression.List) - Constructor for class org.hkijena.jipipe.plugins.expressions.NamedTextAnnotationGeneratorExpression.List

List() - Constructor for class org.hkijena.jipipe.plugins.expressions.TableColumnSourceExpressionParameter.List

List(TableColumnSourceExpressionParameter.List) - Constructor for class org.hkijena.jipipe.plugins.expressions.TableColumnSourceExpressionParameter.List

List() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.environments.TSOAXEnvironment.List

List(TSOAXEnvironment.List) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.environments.TSOAXEnvironment.List

List() - Constructor for class org.hkijena.jipipe.plugins.ijocr.environments.TesseractOCREnvironment.List

List(TesseractOCREnvironment.List) - Constructor for class org.hkijena.jipipe.plugins.ijocr.environments.TesseractOCREnvironment.List

List() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeatureFilterParameter.List

List(SpotFeatureFilterParameter.List) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeatureFilterParameter.List

List() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeaturePenaltyParameter.List

List(SpotFeaturePenaltyParameter.List) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeaturePenaltyParameter.List

List() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeatureFilterParameter.List

List(TrackFeatureFilterParameter.List) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeatureFilterParameter.List

List() - Constructor for class org.hkijena.jipipe.plugins.ilastik.environments.IlastikEnvironment.List

List(IlastikEnvironment.List) - Constructor for class org.hkijena.jipipe.plugins.ilastik.environments.IlastikEnvironment.List

List() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.HyperstackDimensionPairParameter.List

List(HyperstackDimensionPairParameter.List) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.HyperstackDimensionPairParameter.List

List() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.MeasurementColumnSortOrder.List

Creates a new instance

List(MeasurementColumnSortOrder.List) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.MeasurementColumnSortOrder.List

Creates a copy

List() - Constructor for class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment.List

List(OMEROCredentialsEnvironment.List) - Constructor for class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment.List

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.api.functions.StringPatternExtractionFunction.List

List(StringPatternExtractionFunction.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.functions.StringPatternExtractionFunction.List

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.graph.GraphNodeReferenceParameter.List

List(GraphNodeReferenceParameter.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.graph.GraphNodeReferenceParameter.List

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter.List

List(PluginCategoriesEnumParameter...) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter.List

List(String...) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter.List

List(PluginCategoriesEnumParameter.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter.List

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.DoubleAndDoublePairParameter.List

Creates a new instance

List(DoubleAndDoublePairParameter.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.DoubleAndDoublePairParameter.List

Creates a copy

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.ExpressionAndExpressionPairParameter.List

Creates a new instance

List(ExpressionAndExpressionPairParameter.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.ExpressionAndExpressionPairParameter.List

Creates a copy

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.IntegerAndIntegerPairParameter.List

Creates a new instance

List(IntegerAndIntegerPairParameter.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.IntegerAndIntegerPairParameter.List

Creates a copy

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.IntRangeAndIntegerPairParameter.List

Creates a new instance

List(IntRangeAndIntegerPairParameter.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.IntRangeAndIntegerPairParameter.List

Creates a copy

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.StringAndStringPairParameter.List

Creates a new instance

List(StringAndStringPairParameter.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.StringAndStringPairParameter.List

Creates a copy

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.StringQueryExpressionAndSortOrderPairParameter.List

Creates a new instance

List(StringQueryExpressionAndSortOrderPairParameter.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.StringQueryExpressionAndSortOrderPairParameter.List

Creates a copy

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.StringQueryExpressionAndStringPairParameter.List

Creates a new instance

List(StringQueryExpressionAndStringPairParameter.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.StringQueryExpressionAndStringPairParameter.List

Creates a copy

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.StringQueryExpressionAndStringQueryPairParameter.List

Creates a new instance

List(StringQueryExpressionAndStringQueryPairParameter.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.StringQueryExpressionAndStringQueryPairParameter.List

Creates a copy

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtraction.List

Creates a new instance

List(StringPatternExtraction.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtraction.List

Creates a copy

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.StringOrDouble.List

Creates a new instance

List(StringOrDouble.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.StringOrDouble.List

Creates a copy

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2dParameter.List

List(Vector2dParameter.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2dParameter.List

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2iParameter.List

List(Vector2iParameter.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2iParameter.List

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3dParameter.List

List(Vector3dParameter.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3dParameter.List

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3iParameter.List

List(Vector3iParameter.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3iParameter.List

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin.List

Creates a new instance

List(FixedMargin.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin.List

Creates a copy

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.InnerMargin.List

Creates a new instance

List(InnerMargin.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.InnerMargin.List

Creates a copy

List() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.Margin.List

Creates a new instance

List(Margin.List) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.Margin.List

Creates a copy

List() - Constructor for class org.hkijena.jipipe.plugins.processes.ProcessEnvironment.List

List(ProcessEnvironment.List) - Constructor for class org.hkijena.jipipe.plugins.processes.ProcessEnvironment.List

List() - Constructor for class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonAdapterLibraryEnvironment.List

List(JIPipePythonAdapterLibraryEnvironment.List) - Constructor for class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonAdapterLibraryEnvironment.List

List() - Constructor for class org.hkijena.jipipe.plugins.python.PythonEnvironment.List

List(PythonEnvironment.List) - Constructor for class org.hkijena.jipipe.plugins.python.PythonEnvironment.List

List() - Constructor for class org.hkijena.jipipe.plugins.r.REnvironment.List

List(REnvironment.List) - Constructor for class org.hkijena.jipipe.plugins.r.REnvironment.List

listDatasets(Path) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.IJ1Hdf5

Return descriptions of supported datasets in an HDF5 file, sorted by their paths.

ListDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.api.collections

Generic parameter for ListParameter

ListDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.collections.ListDesktopParameterEditorUI

listDirectory(Path) - Static method in class org.hkijena.jipipe.utils.PathUtils

ListFiles - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Algorithm that lists files in each folder

ListFiles(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListFiles

ListFiles(ListFiles) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListFiles

Copies the algorithm

listIterator() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

listIterator(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

listIterator() - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

listIterator(int) - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

listNames() - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage

Lists the names of the elements in this storage

ListParameter<T> - Class in org.hkijena.jipipe.plugins.parameters.api.collections

A parameter that is a collection of another parameter type

ListParameter(Class<T>) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameter

ListParameter.Deserializer<T> - Class in org.hkijena.jipipe.plugins.parameters.api.collections

Deserializes the parameter

ListParameter.Serializer - Class in org.hkijena.jipipe.plugins.parameters.api.collections

Serializes the parameter

ListParameterItemParameterAccess<T> - Class in org.hkijena.jipipe.plugins.parameters.api.collections

Parameter access for one entry in ListParameter

ListParameterItemParameterAccess(JIPipeParameterAccess, List<T>, Class<T>, int) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameterItemParameterAccess

Creates a new instance

ListParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.parameters.api.collections

Settings for a ListParameter or derivative

ListSelectionMode - Enum in org.hkijena.jipipe.utils.ui

Enum wrapper for ListSelectionModel modes

listSubDirectories(Path) - Static method in class org.hkijena.jipipe.utils.PathUtils

Finds a file in the specified folder with given extension

ListSubfolders - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Algorithms that lists the sub folders for each input folder

ListSubfolders(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListSubfolders

Creates a new instance

ListSubfolders(ListSubfolders) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListSubfolders

Copies the algorithm

listToPythonArray(Collection<Object>, boolean) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

Converts a collection into a Python array

ListZARRDirectoryZIPDatasetsAlgorithm - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.zarr

ListZARRDirectoryZIPDatasetsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.zarr.ListZARRDirectoryZIPDatasetsAlgorithm

ListZARRDirectoryZIPDatasetsAlgorithm(ListZARRDirectoryZIPDatasetsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.zarr.ListZARRDirectoryZIPDatasetsAlgorithm

ListZARRURIDatasetsAlgorithm - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.zarr

ListZARRURIDatasetsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.zarr.ListZARRURIDatasetsAlgorithm

ListZARRURIDatasetsAlgorithm(ListZARRURIDatasetsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.zarr.ListZARRURIDatasetsAlgorithm

LnColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a logarithm (base e) function

LnColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.LnColumnOperation

load(Path) - Method in class org.hkijena.jipipe.api.registries.JIPipeApplicationSettingsRegistry

Loads settings from the specified file

load() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

load(Path) - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

Loads settings from the specified file

loadAsProject(JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectTemplate

Loads the project

loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

Instruction to load the data from the current data source

loadData(Path) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopAsyncResultDataSlotPreview

Run in a different thread.

loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.BooleanFormData

loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.DoubleFormData

loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.EnumFormData

loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.FormData

This method is called by the form processor nodes on loading data into this form.

loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.GroupHeaderFormData

loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.IntegerFormData

loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.StringFormData

loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.algorithms.TrackmateLegacyCacheDataViewerWindow

loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.trackscheme.TrackSchemeLegacyCacheDataViewerWindow

loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.MaskDrawerFormData

loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.ROIDrawerFormData

loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersLegacyDataViewerWindow

loadData(Path) - Method in class org.hkijena.jipipe.plugins.plots.ui.resultanalysis.PlotDataSlotPreview

loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.TextLegacyCacheDataViewerWindow

loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.display.TableViewerLegacyCacheDataViewerWindow

loadDataIntoLegacyViewer(JIPipeData) - Method in class org.hkijena.jipipe.plugins.clij2.viewers.CLIJImageDataViewer

loadDataIntoLegacyViewer(JIPipeData) - Method in class org.hkijena.jipipe.plugins.ij3d.viewers.ROI3DListDataViewer

loadDataIntoLegacyViewer(JIPipeData) - Method in class org.hkijena.jipipe.plugins.ijfilaments.viewers.Filaments3DGraphDataViewer

loadDataIntoLegacyViewer(JIPipeData) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.viewers.TracksSpotsDataViewer

loadDataIntoLegacyViewer(JIPipeData) - Method in class org.hkijena.jipipe.plugins.imagej2.viewers.ImageJ2DatasetDataViewer

loadDataIntoLegacyViewer(JIPipeData) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ImagePlusDataViewer

loadDataIntoLegacyViewer(JIPipeData) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.LUTDataViewer

loadDataIntoLegacyViewer(JIPipeData) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.OMEImageDataViewer

loadDataIntoLegacyViewer(JIPipeData) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ROI2DListDataViewer

loadDataIntoLegacyViewer(JIPipeData) - Method in class org.hkijena.jipipe.plugins.imp.viewers.ImpImageDataViewer

loadDataIntoLegacyViewer(JIPipeData) - Method in class org.hkijena.jipipe.plugins.opencv.viewers.OpenCvImageDataViewer

loadDataIntoVtkViewer(JIPipeData) - Method in class org.hkijena.jipipe.plugins.clij2.viewers.CLIJImageDataViewer

loadDataIntoVtkViewer(JIPipeData) - Method in class org.hkijena.jipipe.plugins.ij3d.viewers.ROI3DListDataViewer

loadDataIntoVtkViewer(JIPipeData) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ImagePlusDataViewer

loadDataIntoVtkViewer(JIPipeData) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.LUTDataViewer

loadDataIntoVtkViewer(JIPipeData) - Method in class org.hkijena.jipipe.plugins.imp.viewers.ImpImageDataViewer

loadDependenciesFromJson(JsonNode) - Static method in class org.hkijena.jipipe.api.project.JIPipeProject

Deserializes the set of project dependencies from JSON.

loadExample(JIPipeNodeExample) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

Loads an example.

LoadExampleContextMenuAction - Class in org.hkijena.jipipe.plugins.nodeexamples

LoadExampleContextMenuAction() - Constructor for class org.hkijena.jipipe.plugins.nodeexamples.LoadExampleContextMenuAction

loadFromJson(Path) - Static method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

Loads the table from JSON

loadFromJson(JsonNode, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

loadFromURLs(List<String>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

LOADING_PLACEHOLDER_TEXT - Static variable in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewer

loadLookAndFeelFromSettings() - Static method in class org.hkijena.jipipe.utils.UIUtils

Attempts to override the look and feel based on the JIPipe settings

loadLUTFromImage() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerLUTEditor

loadMetadataFromJson(JsonNode) - Static method in class org.hkijena.jipipe.api.project.JIPipeProject

Deserializes the project metadata from JSON

loadObjectFromStream(InputStream, String) - Method in class org.hkijena.jipipe.plugins.ij3d.utils.ExtendedObject3DVoxels

Loads the voxels from a stream

loadObjectsFromStream(InputStream, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

Copy of the original loadObjects() method adapted to loading from streams

loadParametersDesktopQuickAction(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

loadProject(Path, JIPipeValidationReportContext, JIPipeValidationReport) - Static method in class org.hkijena.jipipe.api.project.JIPipeProject

Loads a project from a file

loadProject(Path, JIPipeValidationReportContext, JIPipeValidationReport, JIPipeNotificationInbox) - Static method in class org.hkijena.jipipe.api.project.JIPipeProject

Loads a project from a file

loadProject(JIPipeProject, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

Loads a project into the window

loadProject(Path) - Static method in class org.hkijena.jipipe.JIPipe

Loads a project

loadProject(Path, JIPipeNotificationInbox) - Static method in class org.hkijena.jipipe.JIPipe

Loads a project

loadProject(Path, JIPipeValidationReport, JIPipeNotificationInbox) - Static method in class org.hkijena.jipipe.JIPipe

Loads a project

loadProject(Path, JIPipeValidationReport) - Static method in class org.hkijena.jipipe.JIPipe

Loads a project

loadProject(JsonNode) - Static method in class org.hkijena.jipipe.JIPipeJsonPlugin

Loads an extension from JSON

loadProject(Path) - Static method in class org.hkijena.jipipe.JIPipeJsonPlugin

Loads an extension from a file

loadRoiListFromFile(Path) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Loads a set of ROI from a zip file

LocalAutoThreshold2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local

Segmenter node that thresholds via an auto threshold Based on code from fiji.threshold.Auto_Local_Threshold

LocalAutoThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm

LocalAutoThreshold2DAlgorithm(LocalAutoThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm

Copies the algorithm

LocalAutoThreshold2DAlgorithm.Method - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local

LocalImageCalculator2DExpression - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

LocalImageCalculator2DExpression(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression

LocalImageCalculator2DExpression(LocalImageCalculator2DExpression) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression

LocalMaxima2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

Wrapper around MaximumFinder

LocalMaxima2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm

Instantiates a new node type.

LocalMaxima2DAlgorithm(LocalMaxima2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm

Creates a copy

LocalMaxima2DAlgorithm.OutputType - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

Available output types

LocalMaximumFilter2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

Wrapper around RankFilters

LocalMaximumFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMaximumFilter2DAlgorithm

Instantiates a new node type.

LocalMaximumFilter2DAlgorithm(LocalMaximumFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMaximumFilter2DAlgorithm

Instantiates a new node type.

LocalMaximumFilter3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

Wrapper around RankFilters

LocalMaximumFilter3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm

Instantiates a new node type.

LocalMaximumFilter3DAlgorithm(LocalMaximumFilter3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm

Instantiates a new node type.

LocalMeanSpotSegmentation3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.segmentation

LocalMeanSpotSegmentation3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm

LocalMeanSpotSegmentation3DAlgorithm(LocalMeanSpotSegmentation3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm

LocalMinimumFilter2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

Wrapper around RankFilters

LocalMinimumFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMinimumFilter2DAlgorithm

Instantiates a new node type.

LocalMinimumFilter2DAlgorithm(LocalMinimumFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMinimumFilter2DAlgorithm

Instantiates a new node type.

LocalMinimumFilter3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

Wrapper around RankFilters

LocalMinimumFilter3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm

Instantiates a new node type.

LocalMinimumFilter3DAlgorithm(LocalMinimumFilter3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm

Instantiates a new node type.

LocalPixelCoordinate5DExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

Variable source that allows to address x, y

LocalPixelCoordinate5DExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.LocalPixelCoordinate5DExpressionParameterVariablesInfo

LocalVarianceFilter2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

Wrapper around RankFilters

LocalVarianceFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalVarianceFilter2DAlgorithm

Instantiates a new node type.

LocalVarianceFilter2DAlgorithm(LocalVarianceFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalVarianceFilter2DAlgorithm

Instantiates a new node type.

LocalVarianceFilter3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

Wrapper around RankFilters

LocalVarianceFilter3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm

Instantiates a new node type.

LocalVarianceFilter3DAlgorithm(LocalVarianceFilter3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm

Instantiates a new node type.

LOCATION_KEY_NODE_DISPLAY_NAME - Static variable in class org.hkijena.jipipe.api.data.JIPipeDataSlot

To be used with getLocation().

LOCATION_KEY_NODE_NAME - Static variable in class org.hkijena.jipipe.api.data.JIPipeDataSlot

To be used with getLocation().

LOCATION_KEY_SLOT_DISPLAY_NAME - Static variable in class org.hkijena.jipipe.api.data.JIPipeDataSlot

To be used with getLocation().

LOCATION_KEY_SLOT_IO - Static variable in class org.hkijena.jipipe.api.data.JIPipeDataSlot

To be used with getLocation().

LOCATION_KEY_SLOT_NAME - Static variable in class org.hkijena.jipipe.api.data.JIPipeDataSlot

To be used with getLocation().

LockNodeLocationSizeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

LockNodeLocationSizeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.LockNodeLocationSizeUIContextAction

log(String) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

Writes a message into the log

log(Throwable) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

log(String, Color) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.JIPipeLogger

Log10ColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a logarithm (base 10) function

Log10ColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.Log10ColumnOperation

LOG_LINE_LIMIT - Static variable in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopLogViewLogUI

LogClearedEvent(JIPipeDesktopRunnableLogsCollection) - Constructor for class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection.LogClearedEvent

LogClearedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection.LogClearedEventEmitter

LogEntryAddedEvent(JIPipeDesktopRunnableLogsCollection, JIPipeRunnableLogEntry) - Constructor for class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection.LogEntryAddedEvent

LogEntryAddedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection.LogEntryAddedEventEmitter

LogEntryRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopLogViewer.LogEntryRenderer

logicalAnd() - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

logicalAnd() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Applies a logical AND operation to all Roi in this list.

LogicalAndOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

LogicalAndOperator(String, int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.LogicalAndOperator

LogicalNotOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

LogicalNotOperator(String, int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.LogicalNotOperator

LogicalOperation - Enum in org.hkijena.jipipe.plugins.parameters.library.util

Available operations

logicalOr() - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

logicalOr() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Applies a logical OR operation to all Roi in this list.

LogicalOrOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

LogicalOrOperator(String, int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.LogicalOrOperator

logicalXor() - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

logicalXor() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Applies a logical XOR operation on the list of Roi.

LogicalXOrOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

LogicalXOrOperator(String, int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.LogicalXOrOperator

logPercentage(double, double) - Method in class org.hkijena.jipipe.api.JIPipePercentageProgressInfo

LogUpdatedEvent(JIPipeDesktopRunnableLogsCollection) - Constructor for class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection.LogUpdatedEvent

LogUpdatedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection.LogUpdatedEventEmitter

LongArrayParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays

LongArrayParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.LongArrayParameterImageJ2ModuleInput

LongConstantValueImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant

LongConstantValueImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.LongConstantValueImageJ2OutOfBoundsFactoryData

LongConstantValueImageJ2OutOfBoundsFactoryData(OutOfBoundsConstantValueFactory<?, ?>) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.LongConstantValueImageJ2OutOfBoundsFactoryData

LongConstantValueImageJ2OutOfBoundsFactoryData(LongConstantValueImageJ2OutOfBoundsFactoryData) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.LongConstantValueImageJ2OutOfBoundsFactoryData

LongList - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.list

A list of Long

LongList() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.list.LongList

Creates a new empty list

LongList(LongList) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.list.LongList

Creates a copy

LongParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives

LongParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.LongParameterImageJ2ModuleInput

LongParameterImageJ2ModuleOutput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives

LongParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.LongParameterImageJ2ModuleOutput

LongParameterTypeInfo - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Info for Long

LongParameterTypeInfo() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.LongParameterTypeInfo

LongPrimitiveParameterTypeInfo - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Info for Long

LongPrimitiveParameterTypeInfo() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.LongPrimitiveParameterTypeInfo

LoopEndNode - Class in org.hkijena.jipipe.api.looping

Deprecated.

LoopEndNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.looping.LoopEndNode

Deprecated.

LoopEndNode(LoopEndNode) - Constructor for class org.hkijena.jipipe.api.looping.LoopEndNode

Deprecated.

LoopGroup - Class in org.hkijena.jipipe.api.looping

Encapsulates a set of nodes that are in a loop

LoopGroup(JIPipeGraph) - Constructor for class org.hkijena.jipipe.api.looping.LoopGroup

LoopingPlugin - Class in org.hkijena.jipipe.api.looping

Extension for anything that is related to JIPipeGraphWrapperAlgorithm

LoopingPlugin() - Constructor for class org.hkijena.jipipe.api.looping.LoopingPlugin

LoopStartNode - Class in org.hkijena.jipipe.api.looping

Deprecated.

LoopStartNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.looping.LoopStartNode

Deprecated.

LoopStartNode(LoopStartNode) - Constructor for class org.hkijena.jipipe.api.looping.LoopStartNode

Deprecated.

lostOwnership(Clipboard, Transferable) - Method in class org.hkijena.jipipe.utils.ui.CopyImageToClipboard

lowerSelection(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

LowerUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

LowerUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.LowerUIContextAction

LSP_IMAGE_OUTPUT_SLOT - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm

LUTData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes

LUTData() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.LUTData

LUTData(LUTData) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.LUTData

LUTDataViewer - Class in org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers

LUTDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.LUTDataViewer

lutFromImage(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Converts an image into a LUT.

LUTInverterAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut

LUTInverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.LUTInverterAlgorithm

LUTInverterAlgorithm(LUTInverterAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.LUTInverterAlgorithm

LUTManagerPlugin2D - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d

LUTManagerPlugin2D(JIPipeDesktopLegacyImageViewer) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.LUTManagerPlugin2D

lutToImage(LUT, int, int) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Converts a LUT into an RGB image

LUTToImageTypeConverter - Class in org.hkijena.jipipe.plugins.imagejdatatypes.converters

LUTToImageTypeConverter() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.converters.LUTToImageTypeConverter

M

MacroFlag - Class in org.hkijena.jipipe.utils.scripting

Helper for optional macro flags

MacroFlag(String, boolean) - Constructor for class org.hkijena.jipipe.utils.scripting.MacroFlag

MacroSetting - Class in org.hkijena.jipipe.utils.scripting

Helper class for ImageJ macro parameters

MacroSetting(String, Object) - Constructor for class org.hkijena.jipipe.utils.scripting.MacroSetting

MacroUtils - Class in org.hkijena.jipipe.utils.scripting

Utility functions for macros

MacroWrapperAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes

An algorithm that wraps around an ImageJ macro

MacroWrapperAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.MacroWrapperAlgorithm

MacroWrapperAlgorithm(MacroWrapperAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.MacroWrapperAlgorithm

Copies the algorithm

MAGNIFIER - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegPointHandler

The magnifying tool is set in eleventh position to be coherent with ImageJ.

main(String...) - Static method in class org.hkijena.jipipe.cli.JIPipeCLIMain

main(String[]) - Static method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNext

main(String[]) - Static method in class org.hkijena.jipipe.desktop.commons.components.icons.SpinnerIcon

main(String[]) - Static method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopSplashScreen

main(String[]) - Static method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon

main(String[]) - Static method in class org.hkijena.jipipe.desktop.FrameTest

main(String...) - Static method in class org.hkijena.jipipe.desktop.JIPipeDesktopMain

main(String[]) - Static method in class org.hkijena.jipipe.desktop.RunJIPipeNodeMain

main(String...) - Static method in class org.hkijena.jipipe.JIPipeGUICommand

main(String[]) - Static method in class org.hkijena.jipipe.JIPipeLauncher

Deprecated.

main(String[]) - Static method in class org.hkijena.jipipe.JIPipeRunAlgorithmCommand

main(String[]) - Static method in class org.hkijena.jipipe.plugins.clij2.GenerateDocumentationUtil

main(String[]) - Static method in class org.hkijena.jipipe.utils.ArchiveUtils

main(String[]) - Static method in class org.hkijena.jipipe.utils.NaturalOrderComparator

MainCategoryFilter(JIPipeNodeTypeCategory, JToggleButton) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.MainCategoryFilter

makeAllUnixExecutable(Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.PathUtils

Marks all files in that directory as Unix executable

makeButtonBorderlessWithoutMargin(T) - Static method in class org.hkijena.jipipe.utils.UIUtils

Makes a component borderless

makeButtonFlat(T) - Static method in class org.hkijena.jipipe.utils.UIUtils

Makes a button flat and have a height of 25px

makeButtonFlat25x25(T) - Static method in class org.hkijena.jipipe.utils.UIUtils

Makes a button flat and 25x25 size

makeButtonFlatWithSize(T, int) - Static method in class org.hkijena.jipipe.utils.UIUtils

Makes a button flat and 25x25 size

makeButtonFlatWithSize(T, int, int) - Static method in class org.hkijena.jipipe.utils.UIUtils

Makes a button flat and 25x25 size

makeButtonHighlightedSuccess(T) - Static method in class org.hkijena.jipipe.utils.UIUtils

makeButtonTransparent(JButton) - Static method in class org.hkijena.jipipe.utils.UIUtils

makeExternalScriptFileRelative(Path) - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptParameter

Converts the external script file reference into a relative path

makeFilesystemCompatible(String) - Static method in class org.hkijena.jipipe.utils.StringUtils

Replaces all characters invalid for filesystems with spaces Assumes that the string is a filename, so path operators are not allowed.

makeFlat() - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

makeInput() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder

makeMacroCompatible(String) - Static method in class org.hkijena.jipipe.utils.scripting.MacroUtils

Makes a string macro-compatible

makeMontage2(List<ImagePlus>, List<String>, int, int, double, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

Creates a montage and returns it as an ImagePlus.

makeMontage2(ImagePlus, int, int, double, int, int, int, int, boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

Creates a montage and returns it as an ImagePlus.

makeNonOpaque(Component, boolean) - Static method in class org.hkijena.jipipe.utils.UIUtils

makeOutput() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder

makeToggleButtonReadonly(JToggleButton) - Static method in class org.hkijena.jipipe.utils.UIUtils

Makes a toggle button readonly without greying it out

makeUnique() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

Makes the stored image unique by duplicating it.

makeUnique() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.list.StringList

makeUniqueString(String, String, Collection<String>) - Static method in class org.hkijena.jipipe.utils.StringUtils

Makes an unique string by adding a counting variable to its end if it already exists

makeUniqueString(String, String, Predicate<String>) - Static method in class org.hkijena.jipipe.utils.StringUtils

Makes an unique string by adding a counting variable to its end if it already exists

makeUnixExecutable(Path) - Static method in class org.hkijena.jipipe.utils.PathUtils

Makes a file/directory executable Does nothing if the OS is Windows

ManualHSBThreshold2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color

ManualHSBThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

ManualHSBThreshold2DAlgorithm(ManualHSBThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

ManualLABThreshold2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color

ManualLABThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

ManualLABThreshold2DAlgorithm(ManualLABThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

ManualRGBThreshold2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color

ManualRGBThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

ManualRGBThreshold2DAlgorithm(ManualRGBThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

ManualThreshold16U2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

Wrapper around ImageProcessor

ManualThreshold16U2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm

Instantiates a new node type.

ManualThreshold16U2DAlgorithm(ManualThreshold16U2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm

Instantiates a new node type.

ManualThreshold32F2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

Wrapper around ImageProcessor

ManualThreshold32F2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm

Instantiates a new node type.

ManualThreshold32F2DAlgorithm(ManualThreshold32F2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm

Instantiates a new node type.

ManualThreshold8U2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

Wrapper around ImageProcessor

ManualThreshold8U2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm

Instantiates a new node type.

ManualThreshold8U2DAlgorithm(ManualThreshold8U2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm

Instantiates a new node type.

mapToAnnotationList(Map<String, String>) - Static method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

Converts an annotation map to a list

mapToCollection(Class<T>) - Method in class org.hkijena.jipipe.plugins.parameters.library.collections.ParameterCollectionList

Maps the items to a JIPipeParameterCollection type.

mapToPythonArguments(Map<String, Object>) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

Converts a dictionary into a set of Python function arguments

mapToPythonDict(Map<String, Object>) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

Converts a dictionary into a set of Python function arguments

MarchingCubes - Class in org.hkijena.jipipe.plugins.scene3d.utils

Adapted from PrimozLavric

MarchingCubes() - Constructor for class org.hkijena.jipipe.plugins.scene3d.utils.MarchingCubes

marchingCubes(ImagePlus, int, int, double, int, boolean, boolean, Quantity.LengthUnit) - Static method in class org.hkijena.jipipe.plugins.scene3d.utils.MarchingCubes

marchingCubesByte(byte[], int[], int, float[], char, int) - Static method in class org.hkijena.jipipe.plugins.scene3d.utils.MarchingCubes

marchingCubesDouble(double[], int[], int, float[], double, int) - Static method in class org.hkijena.jipipe.plugins.scene3d.utils.MarchingCubes

marchingCubesFloat(float[], int[], int, float[], float, int) - Static method in class org.hkijena.jipipe.plugins.scene3d.utils.MarchingCubes

marchingCubesInt(int[], int[], int, float[], int, int) - Static method in class org.hkijena.jipipe.plugins.scene3d.utils.MarchingCubes

marchingCubesShort(short[], int[], int, float[], short, int) - Static method in class org.hkijena.jipipe.plugins.scene3d.utils.MarchingCubes

Margin - Class in org.hkijena.jipipe.plugins.parameters.library.roi

Parameter that allows users to define a rectangle ROI.

Margin() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

Creates a new instance

Margin(Rectangle) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

Creates a margin from a rectangle

Margin(Margin) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

Creates a copy

Margin(Anchor) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

Margin.List - Class in org.hkijena.jipipe.plugins.parameters.library.roi

List parameter of Margin

MarginDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.roi

Editor for Margin

MarginDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.MarginDesktopParameterEditorUI

markAllAsRead() - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection

markAsRead(JIPipeRunnableLogEntry) - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection

MarkdownText - Class in org.hkijena.jipipe.plugins.parameters.library.markup

Contains Markdown data

MarkdownText() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.markup.MarkdownText

MarkdownText(String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.markup.MarkdownText

markWidth - Variable in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

MaskChangedEvent(MaskDrawerPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D.MaskChangedEvent

MaskChangedEventEmitter() - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D.MaskChangedEventEmitter

MaskDrawer2DTool - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer

Super class for any tool that can be used in MaskDrawerPlugin2D

MaskDrawer2DTool(MaskDrawerPlugin2D, String, String, Icon) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawer2DTool

MaskDrawerFormData - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms

Structural FormData for drawing masks

MaskDrawerFormData(List<JIPipeMultiIterationStep>, DrawMaskAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.MaskDrawerFormData

MaskDrawerPlugin2D - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer

MaskDrawerPlugin2D(JIPipeDesktopLegacyImageViewer) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

MaskDrawerPlugin2D.MaskChangedEvent - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer

MaskDrawerPlugin2D.MaskChangedEventEmitter - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer

MaskDrawerPlugin2D.MaskChangedEventListener - Interface in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer

MaskDrawerPlugin2D.MaskColor - Enum in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer

MaskTo3DMeshAlgorithm - Class in org.hkijena.jipipe.plugins.scene3d.nodes

MaskTo3DMeshAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.scene3d.nodes.MaskTo3DMeshAlgorithm

MaskTo3DMeshAlgorithm(MaskTo3DMeshAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.scene3d.nodes.MaskTo3DMeshAlgorithm

maskToBufferedImage(ImageProcessor, BufferedImage, Color, Color) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Copies a mask into a BufferedImage

MaskToRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate

MaskToRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.MaskToRoiAlgorithm

MaskToRoiAlgorithm(MaskToRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.MaskToRoiAlgorithm

MaskToROIDrawerPlugin2D - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer

Mask drawer with function to add ROIs to the ROI manager

MaskToROIDrawerPlugin2D(JIPipeDesktopLegacyImageViewer) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskToROIDrawerPlugin2D

matches(JIPipeNodeDatabasePipelineVisibility) - Method in enum org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabasePipelineVisibility

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddBookmarkNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewCompartmentUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewParameterSetNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.ClearCacheNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.CollapseIOInterfaceNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DeleteCompartmentUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DeleteNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisablePassThroughNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableSaveOutputsNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableVirtualOutputNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnablePassThroughNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableSaveOutputsNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableVirtualOutputsNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.ExportCompartmentAsJsonNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.GroupNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.InvertSelectionNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.IsolateNodesUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.JsonAlgorithmToGroupNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.LockNodeLocationSizeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.LowerUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIDownContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUILeftContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIRightContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIUpContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeContextActionWrapperUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeUIContextAction

Returns if the action shows up

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.OpenCacheBrowserInWindowUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RaiseUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RemoveBookmarkNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RunAndShowIntermediateResultsNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RunAndShowResultsNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SelectAllNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SelectAndMoveNodeHereNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SendToBackgroundUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SendToForegroundUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UnlockNodeLocationSizeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheOnlyPredecessorsNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheShowIntermediateNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsCopyNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsPasteNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphCopyNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphDuplicateNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphPasteNodeUIContextAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.plugins.nodeexamples.LoadExampleContextMenuAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.plugins.nodetemplate.AddTemplateContextMenuAction

matches(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.plugins.utils.contextmenu.ParameterExplorerContextMenuAction

Matrix2D<T> - Class in org.hkijena.jipipe.plugins.parameters.api.matrix

A 2D matrix of floats

Matrix2D(Class<T>) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

Creates a new instance

Matrix2D(Matrix2D<T>) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

Creates a copy

Matrix2D.Deserializer<T> - Class in org.hkijena.jipipe.plugins.parameters.api.matrix

Deserializes the parameter

Matrix2D.Serializer - Class in org.hkijena.jipipe.plugins.parameters.api.matrix

Serializes the parameter

Matrix2DDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.api.matrix

Editor for Matrix2D

Matrix2DDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2DDesktopParameterEditorUI

Matrix2DFloat - Class in org.hkijena.jipipe.plugins.parameters.library.matrix

Matrix containing Float

Matrix2DFloat() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.matrix.Matrix2DFloat

Creates a new object

Matrix2DFloat(Matrix2DFloat) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.matrix.Matrix2DFloat

Creates a copy

MatrixToImageAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert

MatrixToImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.MatrixToImageAlgorithm

MatrixToImageAlgorithm(MatrixToImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.MatrixToImageAlgorithm

max - Variable in class org.hkijena.jipipe.utils.PointRange

Mean(ImageProcessor, int, int, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm

measure(ImageHandler, int, boolean, String, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

measure(ImagePlus, ImageStatisticsSetParameter, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Generates ROI statistics

measure() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Measures the image or selection and adds the results to the default results table.

MeasureBranchesNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks

MeasureBranchesNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.MeasureBranchesNode

MeasureBranchesNode(MeasureBranchesNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.MeasureBranchesNode

measureComponent(ResultsTableData, String, Set<FilamentVertex>) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

measureComponents() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

measureCurrentMask() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MeasurementDrawerPlugin2D

measureEdge(FilamentEdge, Map<String, Object>, String, String) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

Measures an edge

measureEdges() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

MeasureEdgesAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.measure

MeasureEdgesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.measure.MeasureEdgesAlgorithm

MeasureEdgesAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.measure.MeasureEdgesAlgorithm

MeasureEdgesNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks

MeasureEdgesNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.MeasureEdgesNode

MeasureEdgesNode(MeasureEdgesNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.MeasureEdgesNode

MeasureFilamentsAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.measure

MeasureFilamentsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.measure.MeasureFilamentsAlgorithm

MeasureFilamentsAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.measure.MeasureFilamentsAlgorithm

measureLabels(ImageProcessor, ImageProcessor, ImageStatisticsSetParameter, ImageSliceIndex, Calibration, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageJAlgorithmUtils

Measures properties of a label image

Measurement - Enum in org.hkijena.jipipe.plugins.imagejdatatypes.util.measure

Measurements defined by Measurements.

Measurement2DSettings - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager

Measurement2DSettings() - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.Measurement2DSettings

Measurement3DSettings - Class in org.hkijena.jipipe.plugins.ij3d.imageviewer

Measurement3DSettings() - Constructor for class org.hkijena.jipipe.plugins.ij3d.imageviewer.Measurement3DSettings

MeasurementColumn - Enum in org.hkijena.jipipe.plugins.imagejdatatypes.util.measure

Measurements defined by Measurements.

MeasurementColumnSortOrder - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util.measure

A key-value pair parameter of MeasurementColumn to SortOrder

MeasurementColumnSortOrder() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.MeasurementColumnSortOrder

Creates a new instance

MeasurementColumnSortOrder(MeasurementColumnSortOrder) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.MeasurementColumnSortOrder

Creates a copy

MeasurementColumnSortOrder.List - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util.measure

A list of MeasurementColumnSortOrder

MeasurementDrawerPlugin2D - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer

Mask drawer focuses on measurements (different category and icon)

MeasurementDrawerPlugin2D(JIPipeDesktopLegacyImageViewer) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MeasurementDrawerPlugin2D

MeasurementDrawerPlugin2D.Settings - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer

MeasurementExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util.measure

A variable source that contains the ImageJ measurements.

MeasurementExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.MeasurementExpressionParameterVariablesInfo

measureNewEdge(FilamentVertex, FilamentVertex, Map<String, Object>, String, String) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

Measures an edge that might not exist

measureROI(ImagePlus, ROI2DListData, ImageStatisticsSetParameter, boolean, String, ResultsTableData, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageJAlgorithmUtils

measureROI(Roi, ImagePlus, boolean, Measurement...) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

measureRoi3d(ImageHandler, ROI3DListData, int, boolean, String, ResultsTableData, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ij3d.IJ3DUtils

measureRoi3dRelation(ImageHandler, ROI3DListData, ROI3DListData, int, boolean, boolean, boolean, boolean, boolean, String, ResultsTableData, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ij3d.IJ3DUtils

measureROIRelation(ImagePlus, ROI2DListData, ROI2DListData, int, boolean, boolean, boolean, String, ResultsTableData, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageJAlgorithmUtils

MeasureSpotsNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots

MeasureSpotsNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.MeasureSpotsNode

MeasureSpotsNode(MeasureSpotsNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.MeasureSpotsNode

MeasureTracksNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks

MeasureTracksNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.MeasureTracksNode

MeasureTracksNode(MeasureTracksNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.MeasureTracksNode

measureVertex(FilamentVertex, Map<String, Object>, String) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

measureVertices() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

MeasureVerticesAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.measure

MeasureVerticesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.measure.MeasureVerticesAlgorithm

MeasureVerticesAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.measure.MeasureVerticesAlgorithm

Median(ImageProcessor, int, int, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm

MedianBlurFilter2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur

Wrapper around RankFilters

MedianBlurFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurFilter2DAlgorithm

Instantiates a new node type.

MedianBlurFilter2DAlgorithm(MedianBlurFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurFilter2DAlgorithm

Instantiates a new node type.

MedianBlurFilter3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur

Wrapper around GaussianBlur

MedianBlurFilter3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm

Instantiates a new node type.

MedianBlurFilter3DAlgorithm(MedianBlurFilter3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm

Instantiates a new node type.

MedianBlurGreyscale8U2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur

Wrapper around ImageProcessor

MedianBlurGreyscale8U2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurGreyscale8U2DAlgorithm

Instantiates a new node type.

MedianBlurGreyscale8U2DAlgorithm(MedianBlurGreyscale8U2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurGreyscale8U2DAlgorithm

Instantiates a new node type.

MedianBlurRGB2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur

Wrapper around ImageProcessor

MedianBlurRGB2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurRGB2DAlgorithm

Instantiates a new node type.

MedianBlurRGB2DAlgorithm(MedianBlurRGB2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurRGB2DAlgorithm

Instantiates a new node type.

MEDIUM_GRAY - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

MeijeringVesselness2DFeatures - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

Applies CLAHE image enhancing

MeijeringVesselness2DFeatures(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures

MeijeringVesselness2DFeatures(MeijeringVesselness2DFeatures) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures

Copies the algorithm

MeltTableAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.transform

Algorithm that integrates columns

MeltTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.transform.MeltTableAlgorithm

Creates a new instance

MeltTableAlgorithm(MeltTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.transform.MeltTableAlgorithm

Creates a copy

MENU_DISABLED_FOREGROUND - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

MENU_DISABLED_FOREGROUND - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

MENU_ITEM_SEPARATOR - Static variable in class org.hkijena.jipipe.utils.UIUtils

MenuManager - Class in org.hkijena.jipipe.utils

Utility class for managing menus

MenuManager() - Constructor for class org.hkijena.jipipe.utils.MenuManager

MenuManager(JMenuBar) - Constructor for class org.hkijena.jipipe.utils.MenuManager

merge(Collection<JIPipeDataAnnotation>) - Method in enum org.hkijena.jipipe.api.annotation.JIPipeDataAnnotationMergeMode

Ensures that a list of annotations has unique names.

merge(Collection<JIPipeTextAnnotation>) - Method in enum org.hkijena.jipipe.api.annotation.JIPipeTextAnnotationMergeMode

Ensures that a list of annotations has unique names.

merge(String, String) - Method in enum org.hkijena.jipipe.api.annotation.JIPipeTextAnnotationMergeMode

Merges the new annotation value into the existing one according to the strategy

merge(JIPipeParameterCollection, JIPipeParameterTree.Node) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Merges parameters into a given node

Merge2DToHyperstackAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

Merge2DToHyperstackAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.Merge2DToHyperstackAlgorithm

Merge2DToHyperstackAlgorithm(Merge2DToHyperstackAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.Merge2DToHyperstackAlgorithm

MergeAnnotations - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Algorithm that merges the annotations of all inputs and outputs the data with the shared annotations

MergeAnnotations(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.MergeAnnotations

Creates a new instance

MergeAnnotations(MergeAnnotations) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.MergeAnnotations

Creates a copy

MergeChannelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

Wrapper around ImageProcessor

MergeChannelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeChannelsAlgorithm

Instantiates a new node type.

MergeChannelsAlgorithm(MergeChannelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeChannelsAlgorithm

Instantiates a new node type.

MergeChannelsAlgorithm.ChannelColor - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

Color a slice can be mapped to

mergeColumns(List<Integer>, String, String, String) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Creates a new column that consists of a combination of the selected values.

MergeColumnsAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.merge

Algorithm that integrates columns

MergeColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeColumnsAlgorithm

Creates a new instance

MergeColumnsAlgorithm(MergeColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeColumnsAlgorithm

Creates a copy

MergeDataSlots - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Merges the input slot tables into one data slot

MergeDataSlots(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.MergeDataSlots

MergeDataSlots(MergeDataSlots) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.MergeDataSlots

Copies the algorithm

MergeDataToTableAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms.datatable

MergeDataToTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.datatable.MergeDataToTableAlgorithm

MergeDataToTableAlgorithm(MergeDataToTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.datatable.MergeDataToTableAlgorithm

MergeFilamentsAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.merge

MergeFilamentsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.merge.MergeFilamentsAlgorithm

MergeFilamentsAlgorithm(MergeFilamentsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.merge.MergeFilamentsAlgorithm

MergeHSBChannelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

MergeHSBChannelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeHSBChannelsAlgorithm

MergeHSBChannelsAlgorithm(MergeHSBChannelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeHSBChannelsAlgorithm

MergeImagesAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

MergeImagesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.MergeImagesAlgorithm

MergeImagesAlgorithm(MergeImagesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.MergeImagesAlgorithm

mergeInto(Map<String, JIPipeTextAnnotation>, Collection<JIPipeTextAnnotation>) - Method in enum org.hkijena.jipipe.api.annotation.JIPipeTextAnnotationMergeMode

Ensures that a list of annotations has unique names.

MergeLABChannelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

MergeLABChannelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeLABChannelsAlgorithm

MergeLABChannelsAlgorithm(MergeLABChannelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeLABChannelsAlgorithm

MergeLabelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

MergeLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsAlgorithm

MergeLabelsAlgorithm(MergeLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsAlgorithm

MergeLabelsToBinsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

MergeLabelsToBinsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm

MergeLabelsToBinsAlgorithm(MergeLabelsToBinsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm

MergeLabelsToThicknessAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

MergeLabelsToThicknessAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm

MergeLabelsToThicknessAlgorithm(MergeLabelsToThicknessAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm

mergeMappedSlices(Map<ImageSliceIndex, ImageProcessor>, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Merges mapped slices into one image

mergeMappedSlices(Map<ImageSliceIndex, ImageProcessor>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

MergeParametersAlgorithm - Class in org.hkijena.jipipe.plugins.multiparameters.nodes

MergeParametersAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.MergeParametersAlgorithm

MergeParametersAlgorithm(MergeParametersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.MergeParametersAlgorithm

MergeRGBChannelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

MergeRGBChannelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeRGBChannelsAlgorithm

MergeRGBChannelsAlgorithm(MergeRGBChannelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeRGBChannelsAlgorithm

MergeROI3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.merge

MergeROI3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.merge.MergeROI3DAlgorithm

MergeROI3DAlgorithm(JIPipeMergingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.merge.MergeROI3DAlgorithm

MergeRoiListsOrderedAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge

Wrapper around RoiManager

MergeRoiListsOrderedAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge.MergeRoiListsOrderedAlgorithm

Instantiates a new node type.

MergeRoiListsOrderedAlgorithm(MergeRoiListsOrderedAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge.MergeRoiListsOrderedAlgorithm

Instantiates a new node type.

MergeRoiListsPairwiseOrAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge

Wrapper around RoiManager

MergeRoiListsPairwiseOrAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge.MergeRoiListsPairwiseOrAlgorithm

Instantiates a new node type.

MergeRoiListsPairwiseOrAlgorithm(MergeRoiListsPairwiseOrAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge.MergeRoiListsPairwiseOrAlgorithm

Instantiates a new node type.

MergeRoiListsUnorderedAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge

Wrapper around RoiManager

MergeRoiListsUnorderedAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge.MergeRoiListsUnorderedAlgorithm

Instantiates a new node type.

MergeRoiListsUnorderedAlgorithm(MergeRoiListsUnorderedAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge.MergeRoiListsUnorderedAlgorithm

Instantiates a new node type.

MergeScenesAlgorithm - Class in org.hkijena.jipipe.plugins.scene3d.nodes

MergeScenesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.scene3d.nodes.MergeScenesAlgorithm

MergeScenesAlgorithm(MergeScenesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.scene3d.nodes.MergeScenesAlgorithm

MergeSmallLabelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

MergeSmallLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm

MergeSmallLabelsAlgorithm(MergeSmallLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm

MergeSpotsNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots

MergeSpotsNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.MergeSpotsNode

MergeSpotsNode(MergeSpotsNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.MergeSpotsNode

MergeTableColumnsSimpleAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.merge

Algorithm that integrates columns

MergeTableColumnsSimpleAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSimpleAlgorithm

Creates a new instance

MergeTableColumnsSimpleAlgorithm(MergeTableColumnsSimpleAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSimpleAlgorithm

Creates a copy

MergeTableColumnsSupplementAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.merge

Algorithm that integrates columns

MergeTableColumnsSupplementAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm

Creates a new instance

MergeTableColumnsSupplementAlgorithm(MergeTableColumnsSupplementAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm

Creates a copy

MergeTableColumnsSupplementMergingAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.merge

Algorithm that integrates columns

MergeTableColumnsSupplementMergingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementMergingAlgorithm

Creates a new instance

MergeTableColumnsSupplementMergingAlgorithm(MergeTableColumnsSupplementMergingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementMergingAlgorithm

Creates a copy

MergeTableRowsAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.merge

Algorithm that integrates columns

MergeTableRowsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableRowsAlgorithm

Creates a new instance

MergeTableRowsAlgorithm(MergeTableRowsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableRowsAlgorithm

Creates a copy

MergeToJsonSummarizingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.integrating

Implements calculating the sum

MergeToJsonSummarizingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.integrating.MergeToJsonSummarizingColumnOperation

MergeTracksNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks

MergeTracksNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.MergeTracksNode

MergeTracksNode(MergeTracksNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.MergeTracksNode

mergeVertices(Collection<FilamentVertex>) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

mergeWith(JIPipeAuthorMetadata) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

mergeWith(JIPipeGraph) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Merges another graph into this graph The input is not copied!

mergeWith(Filaments3DGraphData) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

mergeWith(ROI2DListData) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Merges the ROI from another data into this one.

mergeWithCopy(Filaments3DGraphData) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

MergingFormProcessorAlgorithm - Class in org.hkijena.jipipe.plugins.forms.algorithms

MergingFormProcessorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.MergingFormProcessorAlgorithm

MergingFormProcessorAlgorithm(MergingFormProcessorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.MergingFormProcessorAlgorithm

MergingJythonScriptAlgorithm - Class in org.hkijena.jipipe.plugins.python.algorithms.jython

An algorithm that allows to run Python code

MergingJythonScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.python.algorithms.jython.MergingJythonScriptAlgorithm

Creates a new instance

MergingJythonScriptAlgorithm(MergingJythonScriptAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.python.algorithms.jython.MergingJythonScriptAlgorithm

Creates a copy

MergingPythonScriptAlgorithm - Class in org.hkijena.jipipe.plugins.python.algorithms.python

An algorithm that allows to run Python code

MergingPythonScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.python.algorithms.python.MergingPythonScriptAlgorithm

Creates a new instance

MergingPythonScriptAlgorithm(MergingPythonScriptAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.python.algorithms.python.MergingPythonScriptAlgorithm

Creates a copy

MergingRScriptAlgorithm - Class in org.hkijena.jipipe.plugins.r.algorithms

MergingRScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.r.algorithms.MergingRScriptAlgorithm

MergingRScriptAlgorithm(MergingRScriptAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.r.algorithms.MergingRScriptAlgorithm

Message(JIPipeDesktopMessagePanel, JIPipeDesktopMessagePanel.MessageType, String, boolean, boolean, Component[]) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMessagePanel.Message

messageLogged(LogMessage) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopSplashScreen

Metadata() - Constructor for class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData.Metadata

Metadata(CellposeModelData.Metadata) - Constructor for class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData.Metadata

Metadata() - Constructor for class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData.Metadata

Metadata(CellposeSizeModelData.Metadata) - Constructor for class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData.Metadata

Metadata() - Constructor for class org.hkijena.jipipe.plugins.ijweka.datatypes.WekaModelData.Metadata

Metadata(WekaSegmentation) - Constructor for class org.hkijena.jipipe.plugins.ijweka.datatypes.WekaModelData.Metadata

METADATA_KEY - Static variable in class org.hkijena.jipipe.api.project.JIPipeProjectInfoParameters

METADATA_KEY - Static variable in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopJIPipeProjectTabMetadata

MetadataEntry() - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry

MetadataEntry(ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry

MetadataEntry() - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm.MetadataEntry

MetadataEntry(ChangeRoi3DPropertiesFromTableAlgorithm.MetadataEntry) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm.MetadataEntry

MetadataProperty() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm.MetadataProperty

MetadataProperty(SetRoiMetadataByStatisticsAlgorithm.MetadataProperty) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm.MetadataProperty

MidGrey(ImageProcessor, int, int, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm

migrateFromLegacy() - Method in class org.hkijena.jipipe.api.registries.JIPipeRecentProjectsRegistry

min - Variable in class org.hkijena.jipipe.utils.PointRange

minimumLayoutSize(Container) - Method in class org.hkijena.jipipe.desktop.commons.components.layouts.JIPipeDesktopFlowLayout

minimumLayoutSize(Container) - Method in class org.hkijena.jipipe.desktop.commons.components.layouts.JIPipeDesktopWrapLayout

Returns the minimum dimensions needed to layout the visible components contained in the specified target container.

minTabWidth - Variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

mirrorImage(ImageProcessor, int, int, int, int, LineMirror.MirrorOperationMode) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LineMirror

MirrorImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds

MirrorImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.MirrorImageJ2OutOfBoundsFactoryData

MirrorImageJ2OutOfBoundsFactoryData(OutOfBoundsMirrorFactory<?, ?>) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.MirrorImageJ2OutOfBoundsFactoryData

MirrorImageJ2OutOfBoundsFactoryData(MirrorImageJ2OutOfBoundsFactoryData) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.MirrorImageJ2OutOfBoundsFactoryData

MiscellaneousNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories

MiscellaneousNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory

mix(Color, Color, double) - Static method in class org.hkijena.jipipe.utils.ColorUtils

ModelChangedEvent(ParameterTable, TableModelEvent) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ModelChangedEvent

ModelChangedEventEmitter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ModelChangedEventEmitter

ModelData - Class in org.hkijena.jipipe.plugins.ijtrackmate.datatypes

ModelData(Model, Settings, ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.ModelData

ModelData(ModelData) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.ModelData

modelToView(int, Shape, Position.Bias) - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Provides a mapping from the document model coordinate space to the coordinate space of the view mapped to it.

ModifiedEvent(JIPipeCache) - Constructor for class org.hkijena.jipipe.api.cache.JIPipeCache.ModifiedEvent

ModifiedEventEmitter() - Constructor for class org.hkijena.jipipe.api.cache.JIPipeCache.ModifiedEventEmitter

ModifyAndMergeTablesScript - Class in org.hkijena.jipipe.plugins.tables.nodes

Algorithm that annotates all data with the same annotation

ModifyAndMergeTablesScript(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.ModifyAndMergeTablesScript

ModifyAndMergeTablesScript(ModifyAndMergeTablesScript) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.ModifyAndMergeTablesScript

Copies the algorithm

ModifyAnnotationScript - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Algorithm that annotates all data with the same annotation

ModifyAnnotationScript(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.ModifyAnnotationScript

ModifyAnnotationScript(ModifyAnnotationScript) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.ModifyAnnotationScript

Copies the algorithm

ModifyPath - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

ModifyPath(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ModifyPath

ModifyPath(ModifyPath) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ModifyPath

ModifyPathWithExpression - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

ModifyPathWithExpression(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ModifyPathWithExpression

ModifyPathWithExpression(ModifyPathWithExpression) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ModifyPathWithExpression

ModifyTableColumnNamesAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes

ModifyTableColumnNamesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.ModifyTableColumnNamesAlgorithm

ModifyTableColumnNamesAlgorithm(ModifyTableColumnNamesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.ModifyTableColumnNamesAlgorithm

ModifyTablesScript - Class in org.hkijena.jipipe.plugins.tables.nodes

Algorithm that annotates all data with the same annotation

ModifyTablesScript(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.ModifyTablesScript

ModifyTablesScript(ModifyTablesScript) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.ModifyTablesScript

Copies the algorithm

moduleItemIsParameter(ModuleItem<?>) - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNode

MonochromeJIPipeDesktopColorIcon - Class in org.hkijena.jipipe.desktop.commons.components.icons

Icon that takes an existing image icon and uses it as mask for recoloring

MonochromeJIPipeDesktopColorIcon(ImageIcon) - Constructor for class org.hkijena.jipipe.desktop.commons.components.icons.MonochromeJIPipeDesktopColorIcon

Creates a white icon

MonochromeJIPipeDesktopColorIcon(ImageIcon, Color) - Constructor for class org.hkijena.jipipe.desktop.commons.components.icons.MonochromeJIPipeDesktopColorIcon

MontageCreator - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

Custom algorithm for creating montages

MontageCreator() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

MontageCreator(MontageCreator) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

MontageCreator.CanvasParameters - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

MontageCreator.ImageParameters - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

MontageCreator.InputEntry - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

MontageCreator.LabelledImage - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

MontageCreator.LabelParameters - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

MontageToStackAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage

Implementation of MontageMaker

MontageToStackAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.MontageToStackAlgorithm

MontageToStackAlgorithm(MontageToStackAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.MontageToStackAlgorithm

MorphologicalFeatureContrast2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

MorphologicalFeatureContrast2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalFeatureContrast2DAlgorithm

MorphologicalFeatureContrast2DAlgorithm(MorphologicalFeatureContrast2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalFeatureContrast2DAlgorithm

MorphologicalFeatureContrast2DAlgorithm.Mode - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

MorphologicalReconstruction2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

MorphologicalReconstruction2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologicalReconstruction2DAlgorithm

MorphologicalReconstruction2DAlgorithm(MorphologicalReconstruction2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologicalReconstruction2DAlgorithm

MorphologicalReconstruction3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

MorphologicalReconstruction3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologicalReconstruction3DAlgorithm

MorphologicalReconstruction3DAlgorithm(MorphologicalReconstruction3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologicalReconstruction3DAlgorithm

MorphologicalTextureContrast2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

MorphologicalTextureContrast2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalTextureContrast2DAlgorithm

MorphologicalTextureContrast2DAlgorithm(MorphologicalTextureContrast2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalTextureContrast2DAlgorithm

Morphology2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

Wrapper around ImageProcessor

Morphology2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm

Instantiates a new node type.

Morphology2DAlgorithm(Morphology2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm

Instantiates a new node type.

Morphology3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

Wrapper around ImageProcessor

Morphology3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm

Instantiates a new node type.

Morphology3DAlgorithm(Morphology3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm

Instantiates a new node type.

MorphologyBinary2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

Wrapper around ImageProcessor

MorphologyBinary2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm

Instantiates a new node type.

MorphologyBinary2DAlgorithm(MorphologyBinary2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm

Instantiates a new node type.

MorphologyBinary2DAlgorithm.Operation - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

Available transformation functions

MorphologyFillHoles2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

Wrapper around ImageProcessor

MorphologyFillHoles2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyFillHoles2DAlgorithm

Instantiates a new node type.

MorphologyFillHoles2DAlgorithm(MorphologyFillHoles2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyFillHoles2DAlgorithm

Instantiates a new node type.

MorphologyInternalGradient2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

Wrapper around ImageProcessor

MorphologyInternalGradient2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyInternalGradient2DAlgorithm

Instantiates a new node type.

MorphologyInternalGradient2DAlgorithm(MorphologyInternalGradient2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyInternalGradient2DAlgorithm

Instantiates a new node type.

MorphologyOutline2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

Wrapper around ImageProcessor

MorphologyOutline2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyOutline2DAlgorithm

Instantiates a new node type.

MorphologyOutline2DAlgorithm(MorphologyOutline2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyOutline2DAlgorithm

Instantiates a new node type.

MorphologySkeletonize2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

Wrapper around ImageProcessor

MorphologySkeletonize2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologySkeletonize2DAlgorithm

Instantiates a new node type.

MorphologySkeletonize2DAlgorithm(MorphologySkeletonize2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologySkeletonize2DAlgorithm

Instantiates a new node type.

MorphologySkeletonize3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

MorphologySkeletonize3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologySkeletonize3DAlgorithm

MorphologySkeletonize3DAlgorithm(MorphologySkeletonize3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologySkeletonize3DAlgorithm

mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool

mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorMinimap

mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMessagePanel.Message

mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopIconPickerDialog

mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.utils.UIUtils.DragThroughMouseListener

MouseClickedEvent - Class in org.hkijena.jipipe.utils.ui.events

MouseClickedEvent(Component, int, long, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseClickedEvent

MouseClickedEvent(Component, int, long, int, int, int, int, boolean) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseClickedEvent

MouseClickedEvent(Component, int, long, int, int, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseClickedEvent

MouseClickedEventEmitter - Class in org.hkijena.jipipe.utils.ui.events

MouseClickedEventEmitter() - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseClickedEventEmitter

MouseClickedEventListener - Interface in org.hkijena.jipipe.utils.ui.events

mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool

mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorMinimap

mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.utils.UIUtils.DragThroughMouseListener

MouseDraggedEvent - Class in org.hkijena.jipipe.utils.ui.events

MouseDraggedEvent(Component, int, long, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseDraggedEvent

MouseDraggedEvent(Component, int, long, int, int, int, int, boolean) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseDraggedEvent

MouseDraggedEvent(Component, int, long, int, int, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseDraggedEvent

MouseDraggedEventEmitter - Class in org.hkijena.jipipe.utils.ui.events

MouseDraggedEventEmitter() - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseDraggedEventEmitter

MouseDraggedEventListener - Interface in org.hkijena.jipipe.utils.ui.events

mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool

mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorMinimap

mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMessagePanel.Message

mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopIconPickerDialog

mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.utils.UIUtils.DragThroughMouseListener

MouseEnteredEvent - Class in org.hkijena.jipipe.utils.ui.events

MouseEnteredEvent(Component, int, long, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseEnteredEvent

MouseEnteredEvent(Component, int, long, int, int, int, int, boolean) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseEnteredEvent

MouseEnteredEvent(Component, int, long, int, int, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseEnteredEvent

MouseEnteredEventEmitter - Class in org.hkijena.jipipe.utils.ui.events

MouseEnteredEventEmitter() - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseEnteredEventEmitter

MouseEnteredEventListener - Interface in org.hkijena.jipipe.utils.ui.events

mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool

mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorMinimap

mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMessagePanel.Message

mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopIconPickerDialog

mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.utils.UIUtils.DragThroughMouseListener

MouseExitedEvent - Class in org.hkijena.jipipe.utils.ui.events

MouseExitedEvent(Component, int, long, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseExitedEvent

MouseExitedEvent(Component, int, long, int, int, int, int, boolean) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseExitedEvent

MouseExitedEvent(Component, int, long, int, int, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseExitedEvent

MouseExitedEventEmitter - Class in org.hkijena.jipipe.utils.ui.events

MouseExitedEventEmitter() - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseExitedEventEmitter

MouseExitedEventListener - Interface in org.hkijena.jipipe.utils.ui.events

MouseMaskDrawer2DTool - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer

The standard mouse selection.

MouseMaskDrawer2DTool(MaskDrawerPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MouseMaskDrawer2DTool

mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool

mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorMinimap

mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.utils.UIUtils.DragThroughMouseListener

MouseMovedEvent - Class in org.hkijena.jipipe.utils.ui.events

MouseMovedEvent(Component, int, long, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseMovedEvent

MouseMovedEvent(Component, int, long, int, int, int, int, boolean) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseMovedEvent

MouseMovedEvent(Component, int, long, int, int, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseMovedEvent

MouseMovedEventEmitter - Class in org.hkijena.jipipe.utils.ui.events

MouseMovedEventEmitter() - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseMovedEventEmitter

MouseMovedEventListener - Interface in org.hkijena.jipipe.utils.ui.events

mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool

mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorMinimap

mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMessagePanel.Message

mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopIconPickerDialog

mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerLUTEditor

mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerOpacityLUTEditor

mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl

mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI

mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.utils.UIUtils.DragThroughMouseListener

MousePressedEvent - Class in org.hkijena.jipipe.utils.ui.events

MousePressedEvent(Component, int, long, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MousePressedEvent

MousePressedEvent(Component, int, long, int, int, int, int, boolean) - Constructor for class org.hkijena.jipipe.utils.ui.events.MousePressedEvent

MousePressedEvent(Component, int, long, int, int, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MousePressedEvent

MousePressedEventEmitter - Class in org.hkijena.jipipe.utils.ui.events

MousePressedEventEmitter() - Constructor for class org.hkijena.jipipe.utils.ui.events.MousePressedEventEmitter

MousePressedEventListener - Interface in org.hkijena.jipipe.utils.ui.events

mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool

mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorMinimap

mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMessagePanel.Message

mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopIconPickerDialog

mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.utils.UIUtils.DragThroughMouseListener

MouseReleasedEvent - Class in org.hkijena.jipipe.utils.ui.events

MouseReleasedEvent(Component, int, long, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseReleasedEvent

MouseReleasedEvent(Component, int, long, int, int, int, int, boolean) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseReleasedEvent

MouseReleasedEvent(Component, int, long, int, int, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseReleasedEvent

MouseReleasedEventEmitter - Class in org.hkijena.jipipe.utils.ui.events

MouseReleasedEventEmitter() - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseReleasedEventEmitter

MouseReleasedEventListener - Interface in org.hkijena.jipipe.utils.ui.events

mouseWheelMoved(MouseWheelEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

MOVE_CROSS - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegPointHandler

The moving tool is set in second position to be coherent with the PointPicker_ plugin.

moveBackIntoViewIfOutside() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

Moves the image back into the view if its not visible

moveCompositePriorityDown(int) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

moveCompositePriorityUp(int) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

moveDown(String, JIPipeSlotType) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Moves the specified slot down in its order

moveDown(String, JIPipeSlotType) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

MoveNodeUIDownContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation

MoveNodeUIDownContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIDownContextAction

MoveNodeUILeftContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation

MoveNodeUILeftContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUILeftContextAction

MoveNodeUIRightContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation

MoveNodeUIRightContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIRightContextAction

MoveNodeUIUpContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation

MoveNodeUIUpContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIUpContextAction

movePanelToLocation(String, JIPipeDesktopDockPanel.PanelLocation, boolean) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

movePoint(int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegPointHandler

Modify the location of the current point.

moveSelection(int, int, boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

moveSeriesDown(JIPipeDesktopPlotSeriesEditor) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

Moves the series down in order

moveSeriesUp(JIPipeDesktopPlotSeriesEditor) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

Moves the series up in order

moveToClosestGridPoint(Point, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

Moves the node to the next grid location, given a real location

moveToGridLocation(Point, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

Moves the node to a grid location

moveToStoredGridLocation(boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

Moves the UI back to the stored grid location

moveUp(String, JIPipeSlotType) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Moves the specified slot up in its order

moveUp(String, JIPipeSlotType) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

MSEBlockFlowAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow

Adapted from mpicbg.ij.plugin.MSEBlockFlow, as the methods there are all protected/private

MSEBlockFlowAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm

MSEBlockFlowAlgorithm(MSEBlockFlowAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm

MSEGaussianFlowAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow

Adapted from mpicbg.ij.plugin.MSEGaussianFlow, as the methods there are all protected/private

MSEGaussianFlowAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm

MSEGaussianFlowAlgorithm(MSEGaussianFlowAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm

MSTGraphAutoLayoutImplementation - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.layout

MST-based auto-layout method

MSTGraphAutoLayoutImplementation() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.layout.MSTGraphAutoLayoutImplementation

MSTGraphAutoLayoutImplementation.Edge - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.layout

MSTGraphAutoLayoutImplementation.Node - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.layout

MultiDataSlotTableColumnRenderer(JIPipeDesktopExtendedMultiDataTableModel) - Constructor for class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableUI.MultiDataSlotTableColumnRenderer

Creates a new instance

MultiIterationStepCheckerAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps

MultiIterationStepCheckerAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm

MultiIterationStepCheckerAlgorithm(MultiIterationStepCheckerAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm

MultiParameterAlgorithmsPlugin - Class in org.hkijena.jipipe.plugins.multiparameters

Extension that provides capabilities to run multiple parameters

MultiParameterAlgorithmsPlugin() - Constructor for class org.hkijena.jipipe.plugins.multiparameters.MultiParameterAlgorithmsPlugin

MultiParametersPlugin - Class in org.hkijena.jipipe.plugins.multiparameters

Extension that provides capabilities to run multiple parameters

MultiParametersPlugin() - Constructor for class org.hkijena.jipipe.plugins.multiparameters.MultiParametersPlugin

MultipleImagesToTableAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert

Algorithm that generates ResultsTableData as histogram

MultipleImagesToTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.MultipleImagesToTableAlgorithm

Creates a new instance

MultipleImagesToTableAlgorithm(MultipleImagesToTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.MultipleImagesToTableAlgorithm

Creates a copy

multiplyHSB(Color, float, float, float) - Static method in class org.hkijena.jipipe.utils.ColorUtils

MultiplyParametersAlgorithm - Class in org.hkijena.jipipe.plugins.multiparameters.nodes

MultiplyParametersAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.MultiplyParametersAlgorithm

MultiplyParametersAlgorithm(MultiplyParametersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.MultiplyParametersAlgorithm

multiplyScalar(List<Double>, double) - Static method in class org.hkijena.jipipe.utils.VectorUtils

MultiTemplateMatchingAlgorithm - Class in org.hkijena.jipipe.plugins.ijmultitemplatematching

MultiTemplateMatchingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

MultiTemplateMatchingAlgorithm(MultiTemplateMatchingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

MultiTemplateMatchingPlugin - Class in org.hkijena.jipipe.plugins.ijmultitemplatematching

Extension that adds ImageJ2 algorithms

MultiTemplateMatchingPlugin() - Constructor for class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingPlugin

MutableTableColumnData - Interface in org.hkijena.jipipe.plugins.tables

A TableColumnData that carries data and is therefore mutable

N

n(double) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Converts a number to a formatted string with a tab at the end.

name() - Method in class org.hkijena.jipipe.api.JIPipeDocumentation

name() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeInputSlot

name() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeOutputSlot

NamedStringQueryExpression - Class in org.hkijena.jipipe.plugins.expressions

NamedStringQueryExpression() - Constructor for class org.hkijena.jipipe.plugins.expressions.NamedStringQueryExpression

NamedStringQueryExpression(PairParameter<String, StringQueryExpression>) - Constructor for class org.hkijena.jipipe.plugins.expressions.NamedStringQueryExpression

NamedStringQueryExpression.List - Class in org.hkijena.jipipe.plugins.expressions

NamedTextAnnotationGeneratorExpression - Class in org.hkijena.jipipe.plugins.expressions

NamedTextAnnotationGeneratorExpression() - Constructor for class org.hkijena.jipipe.plugins.expressions.NamedTextAnnotationGeneratorExpression

NamedTextAnnotationGeneratorExpression(AnnotationGeneratorExpression, String) - Constructor for class org.hkijena.jipipe.plugins.expressions.NamedTextAnnotationGeneratorExpression

NamedTextAnnotationGeneratorExpression(PairParameter<AnnotationGeneratorExpression, String>) - Constructor for class org.hkijena.jipipe.plugins.expressions.NamedTextAnnotationGeneratorExpression

NamedTextAnnotationGeneratorExpression.List - Class in org.hkijena.jipipe.plugins.expressions

nameEquals(JIPipeTextAnnotation, JIPipeTextAnnotation) - Static method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

Returns true if both have the same name.

nameEquals(JIPipeTextAnnotation) - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

Returns true if the names are equal

nameEquals(String) - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

Returns true if the name equals the string

nameEquals(JIPipeDataAnnotationInfo) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataAnnotationInfo

nameEquals(String) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataAnnotationInfo

NaNToNumFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.math

NaNToNumFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.math.NaNToNumFunction

NapariOverlay - Interface in org.hkijena.jipipe.plugins.napari

Type that can export overlay data for Napari

NapariPlugin - Class in org.hkijena.jipipe.plugins.napari

NapariPlugin() - Constructor for class org.hkijena.jipipe.plugins.napari.NapariPlugin

NapariPluginApplicationSettings - Class in org.hkijena.jipipe.plugins.napari

NapariPluginApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.napari.NapariPluginApplicationSettings

NaturalOrderComparator<T> - Class in org.hkijena.jipipe.utils

NaturalOrderComparator() - Constructor for class org.hkijena.jipipe.utils.NaturalOrderComparator

NavigableJIPipeValidationReportContext - Class in org.hkijena.jipipe.api.validation

A JIPipeValidationReportContext that can navigate to an UI element

NavigableJIPipeValidationReportContext() - Constructor for class org.hkijena.jipipe.api.validation.NavigableJIPipeValidationReportContext

NavigableJIPipeValidationReportContext(JIPipeValidationReportContext) - Constructor for class org.hkijena.jipipe.api.validation.NavigableJIPipeValidationReportContext

navigate(JIPipeWorkbench) - Method in class org.hkijena.jipipe.api.validation.contexts.GraphNodeValidationReportContext

navigate(JIPipeWorkbench) - Method in class org.hkijena.jipipe.api.validation.NavigableJIPipeValidationReportContext

NavigationRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI.NavigationRenderer

Creates a new instance

Neighborhood2D - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.parameters

Neighborhood2D3D - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.parameters

Neighborhood3D - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.parameters

NetworkUtils - Class in org.hkijena.jipipe.utils

NetworkUtils() - Constructor for class org.hkijena.jipipe.utils.NetworkUtils

newBlankOf(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

newBlankOf(ImagePlus, BitDepth) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

NewEdgesSettings() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm.NewEdgesSettings

NewEdgesSettings(CopyFilamentsAcrossZCTAlgorithm.NewEdgesSettings) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm.NewEdgesSettings

newFHT(ImageProcessor, Rectangle, int, int, int) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTCustomFilter

newInstance(Object...) - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo

Creates a new instance

newInstance() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

newInstance() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo

newInstance() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo

newInstance() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo

Creates a new node type instance

newInstance() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterTypeInfo

newInstance() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterTypeInfo

Creates a new non-null instance of the parameter type

newInstance() - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNodeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.EnumParameterTypeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanParameterTypeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanPrimitiveParameterTypeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ByteParameterTypeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BytePrimitiveParameterTypeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.DoubleParameterTypeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.DoublePrimitiveParameterTypeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.FloatParameterTypeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.FloatPrimitiveParameterTypeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.IntParameterTypeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.IntPrimitiveParameterTypeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.LongParameterTypeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.LongPrimitiveParameterTypeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ShortParameterTypeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ShortPrimitiveParameterTypeInfo

newInstance() - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2AlgorithmInfo

newInstance(Class<?>, Object...) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

Creates a new class instance.

NewLineConstant - Class in org.hkijena.jipipe.plugins.expressions.constants

NewLineConstant() - Constructor for class org.hkijena.jipipe.plugins.expressions.constants.NewLineConstant

NewPlotJIPipeDesktopMenuExtension - Class in org.hkijena.jipipe.plugins.plots

Adds an entry "New plot" to the JIPipe menu

NewPlotJIPipeDesktopMenuExtension(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.plots.NewPlotJIPipeDesktopMenuExtension

Creates a new instance

newProject() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

Creates a new project.

newProjectFromTemplate() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

Creates a new project from template

newProjectFromTemplate(JIPipeProjectTemplate) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

Creates a new project from template

NewSplitChannelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

Wrapper around ChannelSplitter

NewSplitChannelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm

Instantiates a new node type.

NewSplitChannelsAlgorithm(NewSplitChannelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm

Creates a copy

NewTableJIPipeDesktopMenuExtension - Class in org.hkijena.jipipe.plugins.tables

Adds an entry "New table" to the JIPipe menu

NewTableJIPipeDesktopMenuExtension(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.tables.NewTableJIPipeDesktopMenuExtension

Creates a new instance

newTempDirectory() - Method in interface org.hkijena.jipipe.api.JIPipeWorkbench

Creates a new temporary directory.

newTempDirectory(String) - Method in interface org.hkijena.jipipe.api.JIPipeWorkbench

Creates a new temporary directory.

newTemporaryDirectory(String) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Creates a new temporary subdirectory in the project's temporary directory

newTemporaryDirectory() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Creates a new temporary subdirectory in the project's temporary directory

newTemporaryFilePath(String, String) - Method in interface org.hkijena.jipipe.api.JIPipeWorkbench

Creates a new temporary file path.

newTemporaryFilePath(String, String) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Gets the path to a non-existing file in the project's temporary directory

newWindow(Context, JIPipeProject, boolean, boolean) - Static method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

Creates a new window

NewZProjectorAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

Wrapper around ZProjector

NewZProjectorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm

Instantiates a new node type.

NewZProjectorAlgorithm(NewZProjectorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm

Instantiates a new node type.

next() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.TokenIterator

Niblack(ImageProcessor, int, double, int, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm

NiblackLocalAutoThreshold2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local

Segmenter node that thresholds via an auto threshold Based on code from fiji.threshold.Auto_Local_Threshold

NiblackLocalAutoThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm

NiblackLocalAutoThreshold2DAlgorithm(NiblackLocalAutoThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm

Copies the algorithm

NO_EMPTY_GROUP_HEADERS - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

Flag for JIPipeDesktopParameterFormPanel.

NO_GROUP_HEADERS - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

Flag for JIPipeDesktopParameterFormPanel.

NO_IMAGEJ - Static variable in class org.hkijena.jipipe.JIPipe

To be used with an alternative start mode not involving ImageJ

NO_SETTINGS_AUTOSAVE - Static variable in class org.hkijena.jipipe.JIPipe

Prevent saving settings

Node(JIPipeParameterTree.Node, JIPipeParameterCollection) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

Creates a node

Node(JIPipeDesktopGraphNodeUI) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.layout.MSTGraphAutoLayoutImplementation.Node

NodeAddedEvent(JIPipeGraph, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeAddedEvent

NodeAddedEventEmitter() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeAddedEventEmitter

NodeConnectedEvent(JIPipeGraph, JIPipeDataSlot, JIPipeDataSlot) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeConnectedEvent

NodeConnectedEventEmitter() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeConnectedEventEmitter

NodeContextActionWrapperUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

NodeContextActionWrapperUIContextAction(JIPipeNodeInfo, String, String, Icon, Method) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeContextActionWrapperUIContextAction

NodeDisconnectedEvent(JIPipeGraph, JIPipeDataSlot, JIPipeDataSlot) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeDisconnectedEvent

NodeDisconnectedEventEmitter() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeDisconnectedEventEmitter

NodeGroupContents - Class in org.hkijena.jipipe.api.grouping.parameters

NodeGroupContents() - Constructor for class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents

Creates a new empty instance

NodeGroupContents(NodeGroupContents) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents

Makes a copy

NodeGroupContents.Deserializer - Class in org.hkijena.jipipe.api.grouping.parameters

NodeGroupContents.Serializer - Class in org.hkijena.jipipe.api.grouping.parameters

NodeGroupContentsDesktopParameterEditorUI - Class in org.hkijena.jipipe.api.grouping.parameters

Editor for NodeGroupContents

NodeGroupContentsDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContentsDesktopParameterEditorUI

NodeInfoDeselectedEvent(JIPipeDesktopNodeInfoPicker, JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.NodeInfoDeselectedEvent

NodeInfoDeselectedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.NodeInfoDeselectedEventEmitter

NodeInfoRegisteredEvent(JIPipeService, JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.JIPipeService.NodeInfoRegisteredEvent

NodeInfoRegisteredEventEmitter() - Constructor for class org.hkijena.jipipe.JIPipeService.NodeInfoRegisteredEventEmitter

NodeInfoSelectedEvent(JIPipeDesktopNodeInfoPicker, JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.NodeInfoSelectedEvent

NodeInfoSelectedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.NodeInfoSelectedEventEmitter

NodeListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterKeyPickerUI.NodeListCellRenderer

NodeRemovedEvent(JIPipeGraph, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeRemovedEvent

NodeRemovedEventEmitter() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeRemovedEventEmitter

NodeSearchSettings() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.NodeSearchSettings

NodeSelectionChangedEvent(JIPipeDesktopGraphCanvasUI) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.NodeSelectionChangedEvent

NodeSelectionChangedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.NodeSelectionChangedEventEmitter

nodesFromJson(JsonNode, JIPipeValidationReportContext, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

NodeSlotsChangedEvent(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.NodeSlotsChangedEvent

NodeSlotsChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.NodeSlotsChangedEventEmitter

NodeTemplateBox - Class in org.hkijena.jipipe.plugins.nodetemplate

NodeTemplateBox(JIPipeDesktopWorkbench, boolean, JIPipeDesktopGraphCanvasUI, Set<JIPipeGraphNode>) - Constructor for class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplateBox

NodeTemplateBoxToolPlugin - Class in org.hkijena.jipipe.plugins.nodetemplate

NodeTemplateBoxToolPlugin() - Constructor for class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplateBoxToolPlugin

NodeTemplateBoxTransferHandler - Class in org.hkijena.jipipe.plugins.nodetemplate

NodeTemplateBoxTransferHandler() - Constructor for class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplateBoxTransferHandler

NodeTemplateDownloaderDialog - Class in org.hkijena.jipipe.plugins.nodetemplate.templatedownloader

NodeTemplateDownloaderDialog(NodeTemplateDownloaderRun) - Constructor for class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderDialog

NodeTemplateDownloaderPackage - Class in org.hkijena.jipipe.plugins.nodetemplate.templatedownloader

NodeTemplateDownloaderPackage() - Constructor for class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage

NodeTemplateDownloaderRepository - Class in org.hkijena.jipipe.plugins.nodetemplate.templatedownloader

NodeTemplateDownloaderRepository() - Constructor for class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderRepository

NodeTemplateDownloaderRun - Class in org.hkijena.jipipe.plugins.nodetemplate.templatedownloader

NodeTemplateDownloaderRun(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderRun

NodeTemplatePopupMenu - Class in org.hkijena.jipipe.plugins.nodetemplate

NodeTemplatePopupMenu(JIPipeDesktopWorkbench, AbstractJIPipeDesktopGraphEditorUI) - Constructor for class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplatePopupMenu

NodeTemplatesRefreshedEvent - Class in org.hkijena.jipipe.plugins.nodetemplate

This event should always be triggered into NodeTemplateSettings.getInstance().getEventBus() (even if non-global).

NodeTemplatesRefreshedEvent() - Constructor for class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplatesRefreshedEvent

NodeTemplatesRefreshedEventEmitter - Class in org.hkijena.jipipe.plugins.nodetemplate

NodeTemplatesRefreshedEventEmitter() - Constructor for class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplatesRefreshedEventEmitter

NodeTemplatesRefreshedEventListener - Interface in org.hkijena.jipipe.plugins.nodetemplate

nodeToString(Node, boolean, boolean) - Static method in class org.hkijena.jipipe.utils.xml.XmlUtils

NodeUIActionRequestedEvent(JIPipeDesktopGraphNodeUI, JIPipeDesktopNodeUIAction) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI.NodeUIActionRequestedEvent

Initializes a new instance

NodeUIActionRequestedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI.NodeUIActionRequestedEventEmitter

NodeUIContextAction - Interface in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

An action that is applied one or multiple algorithms

NodeUISelectedEvent(JIPipeDesktopGraphNodeUI, boolean) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.NodeUISelectedEvent

NodeUISelectedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.NodeUISelectedEventEmitter

NONE - Static variable in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

No flags

NONE - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentPanel

NONE - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Flag that indicates no modifications, meaning (1) No documentation, and (2) no scrolling

NONE - Static variable in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

NonGenericClassFilter - Class in org.hkijena.jipipe.utils.classfilters

NonGenericClassFilter() - Constructor for class org.hkijena.jipipe.utils.classfilters.NonGenericClassFilter

NonGenericImagePlusDataClassFilter - Class in org.hkijena.jipipe.plugins.imagejdatatypes.filters

Filters for image types that can be used for creating new instances.

NonGenericImagePlusDataClassFilter() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.filters.NonGenericImagePlusDataClassFilter

NonSpatialPoint3d - Class in org.hkijena.jipipe.plugins.ijfilaments.util

NonSpatialPoint3d() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.NonSpatialPoint3d

NonSpatialPoint3d(int, int) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.NonSpatialPoint3d

NonSpatialPoint3d(NonSpatialPoint3d) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.NonSpatialPoint3d

normalize(List<TableColumnData>, int) - Method in enum org.hkijena.jipipe.plugins.tables.datatypes.TableColumnNormalization

Generates columns that have the same number of true rows

normalize(List<TableColumnData>) - Method in enum org.hkijena.jipipe.plugins.tables.datatypes.TableColumnNormalization

Generates columns that have the same number of true rows

normalize(ResultsTableData, int) - Method in enum org.hkijena.jipipe.plugins.tables.datatypes.TableColumnNormalization

Normalizes a whole table

normalize(Path) - Static method in class org.hkijena.jipipe.utils.PathUtils

normalize(List<Double>) - Static method in class org.hkijena.jipipe.utils.VectorUtils

normalizeList(List<Path>) - Static method in class org.hkijena.jipipe.utils.PathUtils

Converts UNIX paths to Windows and Windows paths to UNIX

normalizeTabRuns(int, int, int, int) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI.TabbedPaneLayout

NucleiSegmentation3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.segmentation

NucleiSegmentation3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.NucleiSegmentation3DAlgorithm

NucleiSegmentation3DAlgorithm(NucleiSegmentation3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.NucleiSegmentation3DAlgorithm

NullConstant - Class in org.hkijena.jipipe.plugins.expressions.constants

NullConstant() - Constructor for class org.hkijena.jipipe.plugins.expressions.constants.NullConstant

nullTerminate(String) - Static method in class org.hkijena.jipipe.utils.StringUtils

Applies a \0 termination to a string.

nullToEmpty(Object) - Static method in class org.hkijena.jipipe.utils.StringUtils

Returns an empty string if s is null otherwise returns s

nullToFalseOrPredicate(T, Predicate<T>) - Static method in class org.hkijena.jipipe.utils.StreamUtils

Returns false if the nullable is null.

NUM_POINTS - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegPointHandler

The number of points we are willing to deal with is at most 4.

NumberDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Editor for a any numeric parameter

NumberDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.NumberDesktopParameterEditorUI

NumberEditor() - Constructor for class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopTableEditor.NumberEditor

NumberNode(double) - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.NumberNode

NumberParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.parameters.library.primitives

Attached to the getter or setter of Number parameter to setup the GUI

NumberQueryExpressionVariablesInfo - Class in org.hkijena.jipipe.plugins.expressions

Variables for querying strings

NumberQueryExpressionVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.expressions.NumberQueryExpressionVariablesInfo

NumberRangeDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.ranges

NumberRangeDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI

NumberRangeDesktopParameterEditorUI.DisplayRangeStop - Enum in org.hkijena.jipipe.plugins.parameters.library.ranges

NumberRangeDesktopParameterEditorUI.ThumbRenderer - Class in org.hkijena.jipipe.plugins.parameters.library.ranges

NumberRangeDesktopParameterEditorUI.TrackRenderer - Class in org.hkijena.jipipe.plugins.parameters.library.ranges

NumberRangeInvertedMode - Enum in org.hkijena.jipipe.plugins.parameters.library.ranges

NumberRangeParameter - Class in org.hkijena.jipipe.plugins.parameters.library.ranges

NumberRangeParameter(Number, Number) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeParameter

NumberRangeParameter(NumberRangeParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeParameter

NumberRangeParameterGenerator - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Generator that creates instances of Number.

NumberRangeParameterGenerator() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.NumberRangeParameterGenerator

NumberRangeParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.parameters.library.ranges

NumericDivideFunctionOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

NumericDivideFunctionOperator(int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.NumericDivideFunctionOperator

NumericEulerConstant - Class in org.hkijena.jipipe.plugins.expressions.constants

NumericEulerConstant() - Constructor for class org.hkijena.jipipe.plugins.expressions.constants.NumericEulerConstant

NumericExponentFunctionOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

NumericExponentFunctionOperator() - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.NumericExponentFunctionOperator

NumericFunctionExpression - Class in org.hkijena.jipipe.plugins.expressions

A parameter that is intended to set or scale an integer

NumericFunctionExpression() - Constructor for class org.hkijena.jipipe.plugins.expressions.NumericFunctionExpression

NumericFunctionExpression(String) - Constructor for class org.hkijena.jipipe.plugins.expressions.NumericFunctionExpression

NumericFunctionExpression(NumericFunctionExpression) - Constructor for class org.hkijena.jipipe.plugins.expressions.NumericFunctionExpression

NumericFunctionExpression.VariablesInfo - Class in org.hkijena.jipipe.plugins.expressions

NumericFunctionOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

NumericFunctionOperator(String, int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.NumericFunctionOperator

NumericGreaterThanOrEqualPredicateOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

NumericGreaterThanOrEqualPredicateOperator(int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.NumericGreaterThanOrEqualPredicateOperator

NumericGreaterThanPredicateOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

NumericGreaterThanPredicateOperator(int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.NumericGreaterThanPredicateOperator

NumericInfinityConstant - Class in org.hkijena.jipipe.plugins.expressions.constants

NumericInfinityConstant() - Constructor for class org.hkijena.jipipe.plugins.expressions.constants.NumericInfinityConstant

NumericLessThanOrEqualPredicateOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

NumericLessThanOrEqualPredicateOperator(int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.NumericLessThanOrEqualPredicateOperator

NumericLessThanPredicateOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

NumericLessThanPredicateOperator(int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.NumericLessThanPredicateOperator

NumericModuloFunctionOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

NumericModuloFunctionOperator(int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.NumericModuloFunctionOperator

NumericMultiplyFunctionOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

NumericMultiplyFunctionOperator(int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.NumericMultiplyFunctionOperator

NumericNaNInfinityConstant - Class in org.hkijena.jipipe.plugins.expressions.constants

NumericNaNInfinityConstant() - Constructor for class org.hkijena.jipipe.plugins.expressions.constants.NumericNaNInfinityConstant

NumericNegativeInfinityConstant - Class in org.hkijena.jipipe.plugins.expressions.constants

NumericNegativeInfinityConstant() - Constructor for class org.hkijena.jipipe.plugins.expressions.constants.NumericNegativeInfinityConstant

NumericOrStringFunctionOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

NumericOrStringFunctionOperator(String, int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.NumericOrStringFunctionOperator

NumericPiConstant - Class in org.hkijena.jipipe.plugins.expressions.constants

NumericPiConstant() - Constructor for class org.hkijena.jipipe.plugins.expressions.constants.NumericPiConstant

NumericPredicateOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

NumericPredicateOperator(String, int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.NumericPredicateOperator

NumericTauConstant - Class in org.hkijena.jipipe.plugins.expressions.constants

NumericTauConstant() - Constructor for class org.hkijena.jipipe.plugins.expressions.constants.NumericTauConstant

numPoints - Variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines

O

objectListToNumericVector(Collection<?>) - Static method in class org.hkijena.jipipe.utils.VectorUtils

objectToBase64(Object) - Static method in class org.hkijena.jipipe.utils.SerializationUtils

Serializes a Java object into its binary representation (via ObjectOutputStream) as base64

objectToBinaryFile(Object, Path) - Static method in class org.hkijena.jipipe.utils.SerializationUtils

Serializes a Java object into a file via ObjectOutputStream

objectToDouble(Object) - Static method in class org.hkijena.jipipe.utils.StringUtils

objectToJsonString(Object) - Static method in class org.hkijena.jipipe.utils.SerializationUtils

Serializes an object to a JSON string Must be serializable via the Jackson JSON library.

objectToPython(Object) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

Converts the object into valid Python code

OccurrencesColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Converts each entry into a the number of occurrences within the column

OccurrencesColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.OccurrencesColumnOperation

OCEAN_BLACK - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

OCEAN_BLACK - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

OCEAN_DROP - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

OCRPlugin - Class in org.hkijena.jipipe.plugins.ijocr

Extension that adds filaments supports

OCRPlugin() - Constructor for class org.hkijena.jipipe.plugins.ijocr.OCRPlugin

OCRPluginProjectSettings - Class in org.hkijena.jipipe.plugins.ijocr.settings

OCRPluginProjectSettings() - Constructor for class org.hkijena.jipipe.plugins.ijocr.settings.OCRPluginProjectSettings

offset - Variable in class org.hkijena.jipipe.plugins.ilastik.utils.GridCoordinates.Block

OKCancelDialog - Class in org.hkijena.jipipe.utils

OKCancelDialog(Component, String, Component, String) - Constructor for class org.hkijena.jipipe.utils.OKCancelDialog

OME_ACCESSOR_STORAGE - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.ImageJAlgorithmsPlugin

Contains registered OME accessors

OMEAccessorDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.imagejalgorithms.parameters

OMEAccessorDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OMEAccessorDesktopParameterEditorUI

OMEAccessorParameter - Class in org.hkijena.jipipe.plugins.imagejalgorithms.parameters

OMEAccessorParameter() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OMEAccessorParameter

OMEAccessorParameter(OMEAccessorParameter) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OMEAccessorParameter

OMEAccessorStorage - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

OMEAccessorStorage() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OMEAccessorStorage

OMEAccessorTemplate - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

OMEAccessorTemplate(String, String, Method, JIPipeDynamicParameterCollection, List<String>) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OMEAccessorTemplate

OMEAccessorTypeEnumParameter - Class in org.hkijena.jipipe.plugins.imagejalgorithms.parameters

OMEAccessorTypeEnumParameter() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OMEAccessorTypeEnumParameter

OMEAccessorTypeEnumParameter(OMEAccessorTypeEnumParameter) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OMEAccessorTypeEnumParameter

OMEColorMode - Enum in org.hkijena.jipipe.plugins.imagejdatatypes.parameters

Wrapper around Bioformats color modes

OMEExport(OMEImageData, Path, OMEExporterSettings) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.OMEImageData

Copy of the run method in loci.plugins.out.Exporter that allows configuration via a parameter object

OMEExporterSettings - Class in org.hkijena.jipipe.plugins.imagejdatatypes.parameters

OMEExporterSettings() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEExporterSettings

OMEExporterSettings(OMEExporterSettings) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEExporterSettings

OMEImageData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes

Data that is a representation of all information saved in Bio-Formats

OMEImageData(ImagePlus, ROI2DListData, OMEXMLMetadata) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.OMEImageData

OMEImageDataPreview - Class in org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis

OMEImageDataPreview(JIPipeDesktopProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableRowInfo, JIPipeDataAnnotationInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.OMEImageDataPreview

Creates a new renderer

OMEImageDataViewer - Class in org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers

OMEImageDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.OMEImageDataViewer

OMEImageFromImagePlus - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources

OMEImageFromImagePlus(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.OMEImageFromImagePlus

OMEImageFromImagePlus(OMEImageFromImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.OMEImageFromImagePlus

OMEImageFromImageWindowImageJImporter - Class in org.hkijena.jipipe.plugins.imagejdatatypes.compat

OMEImageFromImageWindowImageJImporter() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.compat.OMEImageFromImageWindowImageJImporter

OMEImageResultImportRun - Class in org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis

OMEImageResultImportRun(JIPipeDataSlot, JIPipeDataTableRowInfo, Path, String, String, String, JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.OMEImageResultImportRun

OMEImageToImagePlusTypeConverter - Class in org.hkijena.jipipe.plugins.imagejdatatypes.converters

OMEImageToImagePlusTypeConverter() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.converters.OMEImageToImagePlusTypeConverter

OMEImageToImageWindowImageJExporter - Class in org.hkijena.jipipe.plugins.imagejdatatypes.compat

OMEImageToImageWindowImageJExporter() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.compat.OMEImageToImageWindowImageJExporter

OmeImageToOMEXMLTypeConverter - Class in org.hkijena.jipipe.plugins.imagejdatatypes.converters

OmeImageToOMEXMLTypeConverter() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.converters.OmeImageToOMEXMLTypeConverter

OMEImageToROITypeConverter - Class in org.hkijena.jipipe.plugins.imagejdatatypes.converters

OMEImageToROITypeConverter() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.converters.OMEImageToROITypeConverter

OMEMetadataToTableAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome

OMEMetadataToTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm

OMEMetadataToTableAlgorithm(OMEMetadataToTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm

OMEMetadataToTableAlgorithm.Entry - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome

OMEROAnnotationReferenceData - Class in org.hkijena.jipipe.plugins.omero.datatypes

Data that stores a reference to an OMERO project

OMEROAnnotationReferenceData() - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROAnnotationReferenceData

OMEROAnnotationReferenceData(long) - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROAnnotationReferenceData

OMEROAnnotationReferenceData(AnnotationData, OMEROCredentialsEnvironment) - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROAnnotationReferenceData

OMEROCreateDatasetAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.manage

OMEROCreateDatasetAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.manage.OMEROCreateDatasetAlgorithm

OMEROCreateDatasetAlgorithm(OMEROCreateDatasetAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.manage.OMEROCreateDatasetAlgorithm

OMEROCredentialAccessNode - Interface in org.hkijena.jipipe.plugins.omero

Interface that should be used by nodes that access the OMERO credentials environments

OMEROCredentialsEnvironment - Class in org.hkijena.jipipe.plugins.omero

OMEROCredentialsEnvironment() - Constructor for class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment

OMEROCredentialsEnvironment(OMEROCredentialsEnvironment) - Constructor for class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment

OMEROCredentialsEnvironment.List - Class in org.hkijena.jipipe.plugins.omero

OMERODatasetReferenceData - Class in org.hkijena.jipipe.plugins.omero.datatypes

OMERODatasetReferenceData() - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMERODatasetReferenceData

OMERODatasetReferenceData(long) - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMERODatasetReferenceData

OMERODatasetReferenceData(DatasetData, OMEROCredentialsEnvironment) - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMERODatasetReferenceData

OMERODatasetReferenceDataSource - Class in org.hkijena.jipipe.plugins.omero.nodes.datasources

OMERODatasetReferenceDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMERODatasetReferenceDataSource

OMERODatasetReferenceDataSource(OMERODatasetReferenceDataSource) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMERODatasetReferenceDataSource

OMERODataViewer - Class in org.hkijena.jipipe.plugins.omero.viewers

OMERODataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.omero.viewers.OMERODataViewer

OMEROGateway - Class in org.hkijena.jipipe.plugins.omero.util

OMEROGateway(LoginCredentials, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.util.OMEROGateway

OMEROGroupReferenceData - Class in org.hkijena.jipipe.plugins.omero.datatypes

Data that stores a reference to an OMERO project

OMEROGroupReferenceData() - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROGroupReferenceData

OMEROGroupReferenceData(long) - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROGroupReferenceData

OMEROGroupReferenceDataSource - Class in org.hkijena.jipipe.plugins.omero.nodes.datasources

OMEROGroupReferenceDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROGroupReferenceDataSource

OMEROGroupReferenceDataSource(OMEROGroupReferenceDataSource) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROGroupReferenceDataSource

OMEROImageReferenceData - Class in org.hkijena.jipipe.plugins.omero.datatypes

OMEROImageReferenceData() - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROImageReferenceData

OMEROImageReferenceData(long) - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROImageReferenceData

OMEROImageReferenceData(ImageData, OMEROCredentialsEnvironment) - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROImageReferenceData

OMEROImageReferenceDataSource - Class in org.hkijena.jipipe.plugins.omero.nodes.datasources

OMEROImageReferenceDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROImageReferenceDataSource

OMEROImageReferenceDataSource(OMEROImageReferenceDataSource) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROImageReferenceDataSource

OMEROImageUploader - Class in org.hkijena.jipipe.plugins.omero.util

OMEROImageUploader(LoginCredentials, String, long, SecurityContext, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.util.OMEROImageUploader

OMEROKeyValuePairToAnnotationImporter - Class in org.hkijena.jipipe.plugins.omero.parameters

OMEROKeyValuePairToAnnotationImporter() - Constructor for class org.hkijena.jipipe.plugins.omero.parameters.OMEROKeyValuePairToAnnotationImporter

OMEROKeyValuePairToAnnotationImporter(OMEROKeyValuePairToAnnotationImporter) - Constructor for class org.hkijena.jipipe.plugins.omero.parameters.OMEROKeyValuePairToAnnotationImporter

OMEROListDatasetImagesAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.navigate

OMEROListDatasetImagesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListDatasetImagesAlgorithm

OMEROListDatasetImagesAlgorithm(OMEROListDatasetImagesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListDatasetImagesAlgorithm

OMEROListDatasetsAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.navigate

OMEROListDatasetsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListDatasetsAlgorithm

OMEROListDatasetsAlgorithm(OMEROListDatasetsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListDatasetsAlgorithm

OMEROListGroupsAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.navigate

OMEROListGroupsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListGroupsAlgorithm

OMEROListGroupsAlgorithm(OMEROListGroupsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListGroupsAlgorithm

OMEROListPlatesAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.navigate

OMEROListPlatesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListPlatesAlgorithm

OMEROListPlatesAlgorithm(OMEROListPlatesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListPlatesAlgorithm

OMEROListProjectsAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.navigate

OMEROListProjectsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListProjectsAlgorithm

OMEROListProjectsAlgorithm(OMEROListProjectsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListProjectsAlgorithm

OMEROListScreensAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.navigate

OMEROListScreensAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListScreensAlgorithm

OMEROListScreensAlgorithm(OMEROListScreensAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListScreensAlgorithm

OMEROListWellImagesAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.navigate

OMEROListWellImagesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListWellImagesAlgorithm

OMEROListWellImagesAlgorithm(OMEROListWellImagesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListWellImagesAlgorithm

OMEROListWellsAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.navigate

OMEROListWellsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListWellsAlgorithm

OMEROListWellsAlgorithm(OMEROListWellsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListWellsAlgorithm

OMEROPlateReferenceData - Class in org.hkijena.jipipe.plugins.omero.datatypes

Data that stores a reference to an OMERO plate

OMEROPlateReferenceData() - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROPlateReferenceData

OMEROPlateReferenceData(long) - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROPlateReferenceData

OMEROPlateReferenceData(PlateData, OMEROCredentialsEnvironment) - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROPlateReferenceData

OMEROPlateReferenceDataSource - Class in org.hkijena.jipipe.plugins.omero.nodes.datasources

OMEROPlateReferenceDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROPlateReferenceDataSource

OMEROPlateReferenceDataSource(OMEROPlateReferenceDataSource) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROPlateReferenceDataSource

OMEROPlugin - Class in org.hkijena.jipipe.plugins.omero

Provides data types dor handling strings

OMEROPlugin() - Constructor for class org.hkijena.jipipe.plugins.omero.OMEROPlugin

OMEROPluginApplicationSettings - Class in org.hkijena.jipipe.plugins.omero

OMEROPluginApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.omero.OMEROPluginApplicationSettings

OMEROPluginProjectSettings - Class in org.hkijena.jipipe.plugins.omero

OMEROPluginProjectSettings() - Constructor for class org.hkijena.jipipe.plugins.omero.OMEROPluginProjectSettings

OMEROPluginProjectSettings(OMEROPluginProjectSettings) - Constructor for class org.hkijena.jipipe.plugins.omero.OMEROPluginProjectSettings

OMEROProjectReferenceData - Class in org.hkijena.jipipe.plugins.omero.datatypes

Data that stores a reference to an OMERO project

OMEROProjectReferenceData() - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROProjectReferenceData

OMEROProjectReferenceData(long) - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROProjectReferenceData

OMEROProjectReferenceData(ProjectData, OMEROCredentialsEnvironment) - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROProjectReferenceData

OMEROProjectReferenceDataSource - Class in org.hkijena.jipipe.plugins.omero.nodes.datasources

OMEROProjectReferenceDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROProjectReferenceDataSource

OMEROProjectReferenceDataSource(OMEROProjectReferenceDataSource) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROProjectReferenceDataSource

OMEROScreenReferenceData - Class in org.hkijena.jipipe.plugins.omero.datatypes

Data that stores a reference to an OMERO screen

OMEROScreenReferenceData() - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

OMEROScreenReferenceData(long) - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

OMEROScreenReferenceData(ScreenData, OMEROCredentialsEnvironment) - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

OMEROScreenReferenceDataSource - Class in org.hkijena.jipipe.plugins.omero.nodes.datasources

OMEROScreenReferenceDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROScreenReferenceDataSource

OMEROScreenReferenceDataSource(OMEROScreenReferenceDataSource) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROScreenReferenceDataSource

OMEROTagToAnnotationImporter - Class in org.hkijena.jipipe.plugins.omero.parameters

OMEROTagToAnnotationImporter() - Constructor for class org.hkijena.jipipe.plugins.omero.parameters.OMEROTagToAnnotationImporter

OMEROTagToAnnotationImporter(OMEROTagToAnnotationImporter) - Constructor for class org.hkijena.jipipe.plugins.omero.parameters.OMEROTagToAnnotationImporter

OMEROToJIPipeLogger - Class in org.hkijena.jipipe.plugins.omero.util

OMEROToJIPipeLogger(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.util.OMEROToJIPipeLogger

OMEROUploadToJIPipeLogger - Class in org.hkijena.jipipe.plugins.omero.util

OMEROUploadToJIPipeLogger(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.util.OMEROUploadToJIPipeLogger

OMEROUtils - Class in org.hkijena.jipipe.plugins.omero.util

OMEROUtils() - Constructor for class org.hkijena.jipipe.plugins.omero.util.OMEROUtils

OMEROWellReferenceData - Class in org.hkijena.jipipe.plugins.omero.datatypes

Data that stores a reference to an OMERO well

OMEROWellReferenceData() - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

OMEROWellReferenceData(long) - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

OMEROWellReferenceData(WellData, OMEROCredentialsEnvironment) - Constructor for class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

OMEROWellReferenceDataSource - Class in org.hkijena.jipipe.plugins.omero.nodes.datasources

OMEROWellReferenceDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROWellReferenceDataSource

OMEROWellReferenceDataSource(OMEROWellReferenceDataSource) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROWellReferenceDataSource

OMETIFFCompression - Enum in org.hkijena.jipipe.plugins.imagejdatatypes.parameters

Available compression methods

Omnipose0InferenceAlgorithm - Class in org.hkijena.jipipe.plugins.omnipose.algorithms

Omnipose0InferenceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

Omnipose0InferenceAlgorithm(Omnipose0InferenceAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

Omnipose0TrainingAlgorithm - Class in org.hkijena.jipipe.plugins.omnipose.algorithms

Omnipose0TrainingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

Omnipose0TrainingAlgorithm(Omnipose0TrainingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

OmniposeEnvironmentAccessNode - Interface in org.hkijena.jipipe.plugins.omnipose

Interface that should be used by nodes that access the OMERO credentials environments

OmniposePlugin - Class in org.hkijena.jipipe.plugins.omnipose

OmniposePlugin() - Constructor for class org.hkijena.jipipe.plugins.omnipose.OmniposePlugin

OmniposePluginApplicationSettings - Class in org.hkijena.jipipe.plugins.omnipose

OmniposePluginApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.omnipose.OmniposePluginApplicationSettings

OmniposePluginProjectSettings - Class in org.hkijena.jipipe.plugins.omnipose

OmniposePluginProjectSettings() - Constructor for class org.hkijena.jipipe.plugins.omnipose.OmniposePluginProjectSettings

OmniposeSegmentationThresholdSettings - Class in org.hkijena.jipipe.plugins.omnipose.parameters

OmniposeSegmentationThresholdSettings() - Constructor for class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationThresholdSettings

OmniposeSegmentationThresholdSettings(OmniposeSegmentationThresholdSettings) - Constructor for class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationThresholdSettings

OmniposeSegmentationTweaksSettings - Class in org.hkijena.jipipe.plugins.omnipose.parameters

OmniposeSegmentationTweaksSettings() - Constructor for class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationTweaksSettings

OmniposeSegmentationTweaksSettings(OmniposeSegmentationTweaksSettings) - Constructor for class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationTweaksSettings

OmniposeTrainingTweaksSettings - Class in org.hkijena.jipipe.plugins.omnipose.parameters

OmniposeTrainingTweaksSettings() - Constructor for class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeTrainingTweaksSettings

OmniposeTrainingTweaksSettings(OmniposeTrainingTweaksSettings) - Constructor for class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeTrainingTweaksSettings

onAlgorithmCacheOutputSelectedEvent(JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEvent) - Method in interface org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEventListener

onApplicationSettingsChanged() - Method in interface org.hkijena.jipipe.api.registries.JIPipeApplicationSettingsRegistry.ChangedEventListener

onApplicationSettingsChanged() - Method in class org.hkijena.jipipe.desktop.app.components.JIPipeDesktopAuthorProfileButton

onArtifactsRegistryUpdated(JIPipeArtifactsRegistry.UpdatedEvent) - Method in interface org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry.UpdatedEventListener

onArtifactsRegistryUpdated(JIPipeArtifactsRegistry.UpdatedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopArtifactsOptionsControl

onBaseDirectoryChanged(JIPipeGraphNode.BaseDirectoryChangedEvent) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeGraphNode.BaseDirectoryChangedEventListener

onCacheClearedEvent(JIPipeCache.ClearedEvent) - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache.ClearedEventListener

onCacheModified(JIPipeCache.ModifiedEvent) - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache.ModifiedEventListener

onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow

onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantUI

Triggered when the cache was updated

onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopAlgorithmCacheBrowserUI

onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCacheBrowserUI

Triggered when the cache was updated

onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCacheManagerUI

Triggered when the cache was updated

onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableUI

Triggered when the cache was updated

onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableUI

Triggered when the cache was updated

onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerUI

onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

onCacheStoredEvent(JIPipeCache.StoredEvent) - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache.StoredEventListener

onCancelled(ProcessUtils.RunCancellationWatchdog.CancelledEvent) - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationExecuteWatchdog

onCancelled(ProcessUtils.RunCancellationWatchdog.CancelledEvent) - Method in interface org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog.CancelledEventListener

onColorButtonColorChosen(JIPipeDesktopColorChooserButton.ColorChosenEvent) - Method in interface org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopColorChooserButton.ColorChosenEventListener

onComponentMouseClicked(MouseClickedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.EllipseMaskDrawer2DTool

onComponentMouseClicked(MouseClickedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.FloodFillMaskDrawer2DTool

onComponentMouseClicked(MouseClickedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PencilMaskDrawer2DTool

onComponentMouseClicked(MouseClickedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PolygonMaskDrawer2DTool

onComponentMouseClicked(MouseClickedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.RectangleMaskDrawer2DTool

onComponentMouseClicked(MouseClickedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIPicker2DTool

onComponentMouseClicked(MouseClickedEvent) - Method in interface org.hkijena.jipipe.utils.ui.events.MouseClickedEventListener

onComponentMouseDragged(MouseDraggedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PencilMaskDrawer2DTool

onComponentMouseDragged(MouseDraggedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIPicker2DTool

onComponentMouseDragged(MouseDraggedEvent) - Method in interface org.hkijena.jipipe.utils.ui.events.MouseDraggedEventListener

onComponentMouseEntered(MouseEnteredEvent) - Method in interface org.hkijena.jipipe.utils.ui.events.MouseEnteredEventListener

onComponentMouseExited(MouseExitedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.EllipseMaskDrawer2DTool

onComponentMouseExited(MouseExitedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PencilMaskDrawer2DTool

onComponentMouseExited(MouseExitedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PolygonMaskDrawer2DTool

onComponentMouseExited(MouseExitedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.RectangleMaskDrawer2DTool

onComponentMouseExited(MouseExitedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIPicker2DTool

onComponentMouseExited(MouseExitedEvent) - Method in interface org.hkijena.jipipe.utils.ui.events.MouseExitedEventListener

onComponentMouseMoved(MouseMovedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.EllipseMaskDrawer2DTool

onComponentMouseMoved(MouseMovedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PencilMaskDrawer2DTool

onComponentMouseMoved(MouseMovedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PolygonMaskDrawer2DTool

onComponentMouseMoved(MouseMovedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.RectangleMaskDrawer2DTool

onComponentMouseMoved(MouseMovedEvent) - Method in interface org.hkijena.jipipe.utils.ui.events.MouseMovedEventListener

onComponentMousePressed(MousePressedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PencilMaskDrawer2DTool

onComponentMousePressed(MousePressedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIPicker2DTool

onComponentMousePressed(MousePressedEvent) - Method in interface org.hkijena.jipipe.utils.ui.events.MousePressedEventListener

onComponentMouseReleased(MouseReleasedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PencilMaskDrawer2DTool

onComponentMouseReleased(MouseReleasedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIPicker2DTool

onComponentMouseReleased(MouseReleasedEvent) - Method in interface org.hkijena.jipipe.utils.ui.events.MouseReleasedEventListener

onDataBrowserUpdated(JIPipeDataBrowser.UpdatedEvent) - Method in interface org.hkijena.jipipe.api.data.browser.JIPipeDataBrowser.UpdatedEventListener

onDataDownloaded(JIPipeData) - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewer

Called when the full data was downloaded.

onDataDownloaded(JIPipeData) - Method in class org.hkijena.jipipe.plugins.core.viewers.JIPipeDataTableDataViewer

onDataDownloaded(JIPipeData) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ImagePlusDataViewer

onDataDownloaded(JIPipeData) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ResultsTableDataViewer

onDataDownloaded(JIPipeData) - Method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersDataViewer

onDataDownloaded(JIPipeData) - Method in class org.hkijena.jipipe.plugins.omero.viewers.OMERODataViewer

onDataDownloaded(JIPipeData) - Method in class org.hkijena.jipipe.plugins.plots.viewers.JFreeChartPlotDataViewer

onDataDownloaded(JIPipeData) - Method in class org.hkijena.jipipe.plugins.tables.display.TableColumnDataViewer

onDataTableBrowserUpdated(JIPipeDataTableBrowser.UpdatedEvent) - Method in interface org.hkijena.jipipe.api.data.browser.JIPipeDataTableBrowser.UpdatedEventListener

onDataTypePickerDataTypeDeselected(JIPipeDesktopDataTypePicker.DataTypeDeselectedEvent) - Method in interface org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.DataTypeDeselectedEventListener

onDataTypePickerDataTypeSelected(JIPipeDesktopDataTypePicker.DataTypeSelectedEvent) - Method in interface org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.DataTypeSelectedEventListener

onDataTypePickerSelectedDataTypesChanged(JIPipeDesktopDataTypePicker.SelectedDataTypesChangedEvent) - Method in interface org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.SelectedDataTypesChangedEventListener

onDataTypePickerSelectedDataTypesChanged(JIPipeDesktopDataTypePicker.SelectedDataTypesChangedEvent) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRefDesktopParameterEditorUI

onDefaultNodeUIActionRequested(JIPipeDesktopGraphNodeUI.DefaultNodeUIActionRequestedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

onDefaultNodeUIActionRequested(JIPipeDesktopGraphNodeUI.DefaultNodeUIActionRequestedEvent) - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI.DefaultNodeUIActionRequestedEventListener

onDefaultNodeUIActionRequested(JIPipeDesktopGraphNodeUI.DefaultNodeUIActionRequestedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.JIPipeDesktopCompartmentsGraphEditorUI

Should be triggered when a user double-clicks a graph node to open it in the graph editor

onDefaultNodeUIActionRequested(JIPipeDesktopGraphNodeUI.DefaultNodeUIActionRequestedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.JIPipeDesktopPipelineGraphEditorUI

onDeserialized(JsonNode, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

onDeserialized(JsonNode, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Override this method to add operations to be run after deserialization from JSON

onDockPanelStateSaved(JIPipeDesktopDockPanel.StateSavedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

onDockPanelStateSaved(JIPipeDesktopDockPanel.StateSavedEvent) - Method in interface org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.StateSavedEventListener

onDocumentTabRenamed(JIPipeDesktopTabPane.TabRenamedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.DocumentTabComponent

onDocumentTabRenamed(JIPipeDesktopTabPane.TabRenamedEvent) - Method in interface org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.TabRenamedEventListener

onDynamicParameterCollectionBeforeAddParameter(JIPipeDynamicParameterCollection.BeforeAddParameterEvent) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.BeforeAddParameterEventListener

oneSliceIndexToOneStackIndex(int, int, int, ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Stack index (one-based)

oneSliceIndexToOneStackIndex(int, int, int, int, int, int) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Stack index (one-based)

oneSliceIndexToOneStackIndex(ImagePlus) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

Interprets this index as one-based index and returns the appropriate stack index

oneSliceIndexToOneStackIndex(int, int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

Interprets this index as one-based index and returns the appropriate stack index

oneToZero() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

onFinished(JIPipeRunnable.FinishedEvent) - Method in interface org.hkijena.jipipe.api.run.JIPipeRunnable

Called when this runnable finishes

onFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToFilesByMetadataExporterRun

onFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToOutputExporterRun

onFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToZIPExporterRun

onFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun

onFormPanelContextHelp(JIPipeDesktopFormPanel.ContextHelpEvent) - Method in interface org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.ContextHelpEventListener

onGCEvent(JIPipeGraphRunGCGraph.GCEvent) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun

onGCEvent(JIPipeGraphRunGCGraph.GCEvent) - Method in interface org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph.GCEventListener

onGraphCanvasNodeSelectionChanged(JIPipeDesktopGraphCanvasUI.NodeSelectionChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

onGraphCanvasNodeSelectionChanged(JIPipeDesktopGraphCanvasUI.NodeSelectionChangedEvent) - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.NodeSelectionChangedEventListener

onGraphCanvasUpdated(JIPipeDesktopGraphCanvasUI.GraphCanvasUpdatedEvent) - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.GraphCanvasUpdatedEventListener

onGraphCanvasUpdated(JIPipeDesktopGraphCanvasUI.GraphCanvasUpdatedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorMinimap

onGraphChanged(JIPipeGraph.GraphChangedEvent) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

Triggered when the wrapped graph changed

onGraphChanged(JIPipeGraph.GraphChangedEvent) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeGraph.GraphChangedEventListener

onGraphChanged(JIPipeGraph.GraphChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.bookmarks.JIPipeDesktopBookmarkListPanel

onGraphChanged(JIPipeGraph.GraphChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

onGraphChanged(JIPipeGraph.GraphChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

onGraphChanged(JIPipeGraph.GraphChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.parameterreference.JIPipeDesktopGraphNodeParameterReferenceGroupCollectionEditorUI

onHighlightColorChanged() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawer2DTool

Triggered when the highlight color was changed

onHighlightColorChanged() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PencilMaskDrawer2DTool

onHistoryChangedEvent(JIPipeHistoryJournal.HistoryChangedEvent) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal.HistoryChangedEventListener

onHistoryChangedEvent(JIPipeHistoryJournal.HistoryChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.history.JIPipeDesktopHistoryJournalUI

onImageChanged() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

onImageChanged() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

Called when the current image is changed

onImageChanged() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.CalibrationPlugin2D

onImageChanged() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.LUTManagerPlugin2D

onImageChanged() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

onImageChanged() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

onImageViewerCanvasPixelHover(ImageViewerPanelCanvas2D.PixelHoverEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.PixelInfoPlugin2D

onImageViewerCanvasPixelHover(ImageViewerPanelCanvas2D.PixelHoverEvent) - Method in interface org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.PixelHoverEventListener

onImageViewerCanvasToolChanged(ImageViewerPanelCanvas2D.ToolChangedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

onImageViewerCanvasToolChanged(ImageViewerPanelCanvas2D.ToolChangedEvent) - Method in interface org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.ToolChangedEventListener

onInterrupted(JIPipeRunnable.InterruptedEvent) - Method in interface org.hkijena.jipipe.api.run.JIPipeRunnable

Called when this runnable is interrupted

onInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataExporterRun

onInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToFilesByMetadataExporterRun

onInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToOutputExporterRun

onInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToZIPExporterRun

onInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun

onJIPipeDatatypeRegistered(JIPipeService.DatatypeRegisteredEvent) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Triggered when a datatype was registered.

onJIPipeDatatypeRegistered(JIPipeService.DatatypeRegisteredEvent) - Method in interface org.hkijena.jipipe.JIPipeService.DatatypeRegisteredEventListener

onJIPipeDatatypeRegistered(JIPipeService.DatatypeRegisteredEvent) - Method in class org.hkijena.jipipe.plugins.plots.PlotsPlugin

onJIPipeNodeInfoRegistered(JIPipeService.NodeInfoRegisteredEvent) - Method in interface org.hkijena.jipipe.JIPipeService.NodeInfoRegisteredEventListener

onJIPipeNodeTemplatesRefreshed(NodeTemplatesRefreshedEvent) - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseUpdater

onJIPipeNodeTemplatesRefreshed(NodeTemplatesRefreshedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.properties.JIPipeDesktopNodeExamplesUI

onJIPipeNodeTemplatesRefreshed(NodeTemplatesRefreshedEvent) - Method in class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplateBox

onJIPipeNodeTemplatesRefreshed(NodeTemplatesRefreshedEvent) - Method in class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplatePopupMenu

onJIPipeNodeTemplatesRefreshed(NodeTemplatesRefreshedEvent) - Method in interface org.hkijena.jipipe.plugins.nodetemplate.NodeTemplatesRefreshedEventListener

onJIPipePluginContentAdded(JIPipeService.ExtensionContentAddedEvent) - Method in interface org.hkijena.jipipe.JIPipeService.PluginContentAddedEventListener

onJIPipePluginContentRemoved(JIPipeService.ExtensionContentRemovedEvent) - Method in interface org.hkijena.jipipe.JIPipeService.PluginContentRemovedEventListener

onJIPipePluginDiscovered(JIPipeService.ExtensionDiscoveredEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopSplashScreen

onJIPipePluginDiscovered(JIPipeService.ExtensionDiscoveredEvent) - Method in interface org.hkijena.jipipe.JIPipeService.PluginDiscoveredEventListener

onJIPipePluginRegistered(JIPipeService.ExtensionRegisteredEvent) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

onJIPipePluginRegistered(JIPipeService.ExtensionRegisteredEvent) - Method in class org.hkijena.jipipe.desktop.app.plugins.JIPipeDesktopPluginValidityCheckerPanel

onJIPipePluginRegistered(JIPipeService.ExtensionRegisteredEvent) - Method in interface org.hkijena.jipipe.JIPipeService.PluginRegisteredEventListener

onJIPipePluginRegistered(JIPipeService.ExtensionRegisteredEvent) - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionLoaderPlugin

onJIPipeTemplatesUpdated(JIPipeProjectTemplateRegistry.TemplatesUpdatedEvent) - Method in interface org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry.TemplatesUpdatedEventListener

onJIPipeTemplatesUpdated(JIPipeProjectTemplateRegistry.TemplatesUpdatedEvent) - Method in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopWelcomePanel

onJIPipeTemplatesUpdated(JIPipeProjectTemplateRegistry.TemplatesUpdatedEvent) - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopJIPipeTemplateSelectionUI

onLogCleared(JIPipeDesktopRunnableLogsCollection.LogClearedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopLogViewer

onLogCleared(JIPipeDesktopRunnableLogsCollection.LogClearedEvent) - Method in interface org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection.LogClearedEventListener

onLogEntryAdded(JIPipeDesktopRunnableLogsCollection.LogEntryAddedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopLogViewer

onLogEntryAdded(JIPipeDesktopRunnableLogsCollection.LogEntryAddedEvent) - Method in interface org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection.LogEntryAddedEventListener

onLogUpdated(JIPipeDesktopRunnableLogsCollection.LogUpdatedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopLogViewer

onLogUpdated(JIPipeDesktopRunnableLogsCollection.LogUpdatedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsButton

onLogUpdated(JIPipeDesktopRunnableLogsCollection.LogUpdatedEvent) - Method in interface org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection.LogUpdatedEventListener

onMaskDrawerPluginMaskChanged(MaskDrawerPlugin2D.MaskChangedEvent) - Method in interface org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D.MaskChangedEventListener

onMaskDrawerPluginMaskChanged(MaskDrawerPlugin2D.MaskChangedEvent) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MeasurementDrawerPlugin2D

onNodeAdded(JIPipeGraph.NodeAddedEvent) - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseUpdater

onNodeAdded(JIPipeGraph.NodeAddedEvent) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeAddedEventListener

onNodeConnected(JIPipeGraph.NodeConnectedEvent) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeConnectedEventListener

onNodeConnected(JIPipeGraph.NodeConnectedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

onNodeConnected(JIPipeGraph.NodeConnectedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

onNodeDisconnected(JIPipeGraph.NodeDisconnectedEvent) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeDisconnectedEventListener

onNodeDisconnected(JIPipeGraph.NodeDisconnectedEvent) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantUI

onNodeDisconnected(JIPipeGraph.NodeDisconnectedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

onNodeInfoPickerNodeInfoDeselectedEvent(JIPipeDesktopNodeInfoPicker.NodeInfoDeselectedEvent) - Method in interface org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.NodeInfoDeselectedEventListener

onNodeInfoPickerNodeInfoSelectedEvent(JIPipeDesktopNodeInfoPicker.NodeInfoSelectedEvent) - Method in interface org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.NodeInfoSelectedEventListener

onNodeInfoPickerNodeInfoSelectedEvent(JIPipeDesktopNodeInfoPicker.NodeInfoSelectedEvent) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeNodeInfoRefDesktopParameterEditorUI

onNodeInfoPickerSelectedInfosChanged(JIPipeDesktopNodeInfoPicker.SelectedInfosChangedEvent) - Method in interface org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.SelectedInfosChangedEventListener

onNodeRemoved(JIPipeGraph.NodeRemovedEvent) - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseUpdater

onNodeRemoved(JIPipeGraph.NodeRemovedEvent) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeRemovedEventListener

onNodeSlotsChanged(JIPipeGraphNode.NodeSlotsChangedEvent) - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration

onNodeSlotsChanged(JIPipeGraphNode.NodeSlotsChangedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Should be triggered when an JIPipeGraphNode's slots are changed.

onNodeSlotsChanged(JIPipeGraphNode.NodeSlotsChangedEvent) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeGraphNode.NodeSlotsChangedEventListener

onNodeSlotsChanged(JIPipeGraphNode.NodeSlotsChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantUI

Triggered when the slots were changed

onNodeSlotsChanged(JIPipeGraphNode.NodeSlotsChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmSettingsPanelIOEditor

onNodeSlotsChanged(JIPipeGraphNode.NodeSlotsChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

onNodeSlotsChanged(JIPipeGraphNode.NodeSlotsChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.properties.JIPipeDesktopGraphNodeSlotEditorUI

Triggered when the algorithm slots are changed

onNodeSlotsChanged(JIPipeGraphNode.NodeSlotsChangedEvent) - Method in class org.hkijena.jipipe.plugins.parameters.api.graph.SlotMapParameterCollection

Triggered when algorithm slots are changed

onNodeUIActionRequested(JIPipeDesktopGraphNodeUI.NodeUIActionRequestedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

onNodeUIActionRequested(JIPipeDesktopGraphNodeUI.NodeUIActionRequestedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

onNodeUIActionRequested(JIPipeDesktopGraphNodeUI.NodeUIActionRequestedEvent) - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI.NodeUIActionRequestedEventListener

onNodeUIActionRequested(JIPipeDesktopGraphNodeUI.NodeUIActionRequestedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.JIPipeDesktopCompartmentsGraphEditorUI

Listens to events of algorithms requesting some action

onNodeUIActionRequested(JIPipeDesktopGraphNodeUI.NodeUIActionRequestedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.JIPipeDesktopPipelineGraphEditorUI

Listens to events of algorithms requesting some action

onNodeUISelected(JIPipeDesktopGraphCanvasUI.NodeUISelectedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

onNodeUISelected(JIPipeDesktopGraphCanvasUI.NodeUISelectedEvent) - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.NodeUISelectedEventListener

onNotificationDismissed(JIPipeNotificationInbox.DismissedEvent) - Method in interface org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.DismissedEventListener

onNotificationDismissed(JIPipeNotificationInbox.DismissedEvent) - Method in class org.hkijena.jipipe.desktop.commons.notifications.JIPipeDesktopGenericNotificationInboxUI

onNotificationDismissed(JIPipeNotificationInbox.DismissedEvent) - Method in class org.hkijena.jipipe.desktop.commons.notifications.JIPipeDesktopWorkbenchNotificationInboxUI

onNotificationInboxUpdated(JIPipeNotificationInbox.UpdatedEvent) - Method in interface org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.UpdatedEventListener

onNotificationInboxUpdated(JIPipeNotificationInbox.UpdatedEvent) - Method in class org.hkijena.jipipe.desktop.commons.notifications.JIPipeDesktopGenericNotificationButton

onNotificationInboxUpdated(JIPipeNotificationInbox.UpdatedEvent) - Method in class org.hkijena.jipipe.desktop.commons.notifications.JIPipeDesktopNotificationButton

onNotificationPushed(JIPipeNotificationInbox.PushedEvent) - Method in interface org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.PushedEventListener

onNotificationPushed(JIPipeNotificationInbox.PushedEvent) - Method in class org.hkijena.jipipe.desktop.commons.notifications.JIPipeDesktopGenericNotificationInboxUI

onNotificationPushed(JIPipeNotificationInbox.PushedEvent) - Method in class org.hkijena.jipipe.desktop.commons.notifications.JIPipeDesktopWorkbenchNotificationInboxUI

onOverlayAdded(Object) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

onOverlayAdded(Object) - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

onOverlayAdded(Object) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

onOverlayAdded(Object) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

onOverlayAdded(Object) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

Called if an overlay was added

onOverlayAdded(Object) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

onOverlayRemoved(Object) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

onOverlayRemoved(Object) - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

onOverlayRemoved(Object) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

onOverlayRemoved(Object) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

onOverlayRemoved(Object) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

Called if an overlay was removed

onOverlayRemoved(Object) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

onOverlaysCleared() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

onOverlaysCleared() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

Called if the overlays were cleared

onOverlaysCleared() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

onPanelSideVisibilityChanged(JIPipeDesktopDockPanel.PanelSideVisibilityChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

onPanelSideVisibilityChanged(JIPipeDesktopDockPanel.PanelSideVisibilityChangedEvent) - Method in interface org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.PanelSideVisibilityChangedEventListener

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseUpdater

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Triggered when a parameter is changed within the slot configuration.

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection

Triggered when a parameter of this collection was changed

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterChangedEventListener

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

Listens for changes in parameters

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantDataTableUI

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantUI

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.bookmarks.JIPipeDesktopBookmarkListPanel

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataDisplayCacheControl

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableUI

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableUI

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableUI

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerDataTableUI

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopAnnotationGraphNodeUI

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

Should be triggered when an algorithm's name parameter is changed

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.properties.JIPipeDesktopGraphNodeSlotEditorUI

Triggered when the custom name of the slot definition is changed

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.parameterreference.JIPipeDesktopGraphNodeParameterReferenceGroupCollectionEditorUI

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

Triggered when a parameter was changed

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotAvailableDataManagerUI

Triggered when a plot builder parameter is changed

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotSeriesEditor

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JIPipePlotSeriesListEditorUI

Triggered when the plot builder's parameters are changed

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopMergedResultDataSlotTableUI

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotTableUI

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAccelerationOptionsControl

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopDataPreviewControlUI

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.parameters.JIPipeDesktopDynamicParameterEditorDialog

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.parameters.JIPipeDesktopParameterExplorerWindow

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.StringOrDoubleDesktopParameterEditorUI

onParameterReferencesChanged(ParameterReferencesChangedEvent) - Method in interface org.hkijena.jipipe.api.grouping.events.ParameterReferencesChangedEventListener

onParameterReferencesChanged(ParameterReferencesChangedEvent) - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

onParameterReferencesChanged(ParameterReferencesChangedEvent) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection

onParameterReferencesChanged(ParameterReferencesChangedEvent) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectInfoParameters

onParameterReferencesChanged(ParameterReferencesChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.parameterreference.JIPipeDesktopGraphNodeParameterReferenceGroupCollectionEditorUI

onParameterStructureChanged(JIPipeParameterCollection.ParameterStructureChangedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Should be triggered when an JIPipeGraphNode's parameter structure is changed.

onParameterStructureChanged(JIPipeParameterCollection.ParameterStructureChangedEvent) - Method in class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection

Triggered when the parameter structure of this collection was changed

onParameterStructureChanged(JIPipeParameterCollection.ParameterStructureChangedEvent) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterStructureChangedEventListener

onParameterStructureChanged(JIPipeParameterCollection.ParameterStructureChangedEvent) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

onParameterStructureChanged(JIPipeParameterCollection.ParameterStructureChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.parameterreference.JIPipeDesktopGraphNodeParameterReferenceGroupCollectionEditorUI

Triggered when the parameter structure was changed

onParameterStructureChanged(JIPipeParameterCollection.ParameterStructureChangedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

Triggered when the parameter structure was changed

onParameterTableModelChangedEvent(ParameterTable.ModelChangedEvent) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.DesktopParameterTableEditorUI

onParameterTableModelChangedEvent(ParameterTable.ModelChangedEvent) - Method in interface org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ModelChangedEventListener

onParameterUIChanged(JIPipeParameterCollection.ParameterUIChangedEvent) - Method in class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection

Triggered when the parameter UI structure of this collection was changed

onParameterUIChanged(JIPipeParameterCollection.ParameterUIChangedEvent) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterUIChangedEventListener

onParameterUIChanged(JIPipeParameterCollection.ParameterUIChangedEvent) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

onParameterUIChanged(JIPipeParameterCollection.ParameterUIChangedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

Triggered when the parameter UI should be updated

onProgressStatusUpdated(JIPipeProgressInfo.StatusUpdatedEvent) - Method in interface org.hkijena.jipipe.api.JIPipeProgressInfo.StatusUpdatedEventListener

onProgressStatusUpdated(JIPipeProgressInfo.StatusUpdatedEvent) - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableWorker

onProjectCompartmentAdded(JIPipeProject.CompartmentAddedEvent) - Method in interface org.hkijena.jipipe.api.project.JIPipeProject.CompartmentAddedEventListener

onProjectCompartmentRemoved(JIPipeProject.CompartmentRemovedEvent) - Method in interface org.hkijena.jipipe.api.project.JIPipeProject.CompartmentRemovedEventListener

onProjectCompartmentRemoved(JIPipeProject.CompartmentRemovedEvent) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

Triggered when a compartment is deleted.

onRecentProjectListProjectOpened(JIPipeDesktopRecentProjectsListPanel.ProjectOpenedEvent) - Method in interface org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopRecentProjectsListPanel.ProjectOpenedEventListener

onRecentProjectsChanged(JIPipeRecentProjectsRegistry.ChangedEvent) - Method in interface org.hkijena.jipipe.api.registries.JIPipeRecentProjectsRegistry.ChangedEventListener

onRecentProjectsChanged(JIPipeRecentProjectsRegistry.ChangedEvent) - Method in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopRecentProjectsListPanel

onRecentProjectsChanged(JIPipeRecentProjectsRegistry.ChangedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopRecentProjectsMenu

onRunnableEnqueued(JIPipeRunnable.EnqueuedEvent) - Method in interface org.hkijena.jipipe.api.run.JIPipeRunnable.EnqeuedEventListener

onRunnableEnqueued(JIPipeRunnable.EnqueuedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopCompactRunnableQueueButton

onRunnableEnqueued(JIPipeRunnable.EnqueuedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

onRunnableEnqueued(JIPipeRunnable.EnqueuedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButtonMenuItem

Triggered when a worker is enqueued

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in interface org.hkijena.jipipe.api.run.JIPipeRunnable.FinishedEventListener

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

Triggered when a worker is finished

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceDesktopParameterEditorUI

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.backups.JIPipeDesktopBackupManagerPanel

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantUI

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopAlgorithmCacheBrowserUI

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataDisplayCacheControl

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerUI

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorRunManager

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.plugins.artifactsmanager.JIPipeDesktopArtifactManagerUI

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.plugins.pluginsmanager.JIPipeDesktopPluginManagerUI

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopCustomRunSettingsUI

Triggered when the run is finished

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunExecuteUI

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunNextWindow

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopCompactRunnableQueueButton

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButtonMenuItem

Triggered when a worker is finished

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueNotifier

Triggered when a worker is finished

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueuePanelUI

Triggered when a scheduled worker is finished

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectOverviewUI

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.app.settings.project.JIPipeDesktopProjectOverviewRunManager

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopRunnableQueueSpinnerIcon

onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeDesktopExternalEnvironmentParameterEditorUI

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in interface org.hkijena.jipipe.api.run.JIPipeRunnable.InterruptedEventListener

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

Triggered when a worker is interrupted

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantUI

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopAlgorithmCacheBrowserUI

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataDisplayCacheControl

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerUI

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorRunManager

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.plugins.pluginsmanager.JIPipeDesktopPluginManagerUI

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopCustomRunSettingsUI

Triggered when the run is interrupted

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunExecuteUI

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunNextWindow

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopCompactRunnableQueueButton

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButtonMenuItem

Triggered when a worker is interrupted

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueNotifier

Triggered when a worker is interrupted

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueuePanelUI

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectOverviewUI

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.app.settings.project.JIPipeDesktopProjectOverviewRunManager

onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopRunnableQueueSpinnerIcon

onRunnableProgress(JIPipeRunnable.ProgressEvent) - Method in interface org.hkijena.jipipe.api.run.JIPipeRunnable.ProgressEventListener

onRunnableProgress(JIPipeRunnable.ProgressEvent) - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

Triggered when a worker reports progress

onRunnableProgress(JIPipeRunnable.ProgressEvent) - Method in class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunExecuteUI

onRunnableProgress(JIPipeRunnable.ProgressEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopCompactRunnableQueueButton

onRunnableProgress(JIPipeRunnable.ProgressEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

onRunnableProgress(JIPipeRunnable.ProgressEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButtonMenuItem

Triggered when a worker reports progress

onRunnableProgress(JIPipeRunnable.ProgressEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueuePanelUI

Triggered when a worker reports progress

onRunnableStarted(JIPipeRunnable.StartedEvent) - Method in interface org.hkijena.jipipe.api.run.JIPipeRunnable.StartedEventListener

onRunnableStarted(JIPipeRunnable.StartedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataDisplayCacheControl

onRunnableStarted(JIPipeRunnable.StartedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunExecuteUI

onRunnableStarted(JIPipeRunnable.StartedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopCompactRunnableQueueButton

onRunnableStarted(JIPipeRunnable.StartedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

onRunnableStarted(JIPipeRunnable.StartedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButtonMenuItem

Triggered when a worker is started

onRunnableStarted(JIPipeRunnable.StartedEvent) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueuePanelUI

onRunnableStarted(JIPipeRunnable.StartedEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopRunnableQueueSpinnerIcon

onRunSetsModified(JIPipeProjectRunSetsConfiguration.RunSetsModifiedEvent) - Method in interface org.hkijena.jipipe.api.project.JIPipeProjectRunSetsConfiguration.RunSetsModifiedEventListener

onRunSetsModified(JIPipeProjectRunSetsConfiguration.RunSetsModifiedEvent) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectOverviewUI

onRunSetsModified(JIPipeProjectRunSetsConfiguration.RunSetsModifiedEvent) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopRunSetsListEditor

onScheduledActivatePlugin(JIPipePluginRegistry.ScheduledActivatePluginEvent) - Method in interface org.hkijena.jipipe.api.registries.JIPipePluginRegistry.ScheduledActivatePluginEventListener

onScheduledDeactivatePlugin(JIPipePluginRegistry.ScheduledDeactivatePluginEvent) - Method in interface org.hkijena.jipipe.api.registries.JIPipePluginRegistry.ScheduledDeactivatePluginEventListener

onSliceChanged(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

onSliceChanged(boolean) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

onSliceChanged(boolean) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

onSliceChanged(boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin2D

Called when the current slice is changed

onSliceChanged(boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.CalibrationPlugin2D

onSliceChanged(boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

onSliceChanged(boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

onSlotConfigurationChanged(JIPipeSlotConfiguration.SlotConfigurationChangedEvent) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

onSlotConfigurationChanged(JIPipeSlotConfiguration.SlotConfigurationChangedEvent) - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration.SlotConfigurationChangedEventListener

onSlotConfigurationChanged(JIPipeSlotConfiguration.SlotConfigurationChangedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Should be triggered when a slot is added to the slot configuration

onSplitPaneRatioUpdated(JIPipeDesktopSplitPane.RatioUpdatedEvent) - Method in interface org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.RatioUpdatedEventListener

onSplitPaneRatioUpdated(JIPipeDesktopSplitPane.RatioUpdatedEvent) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

onThumbnailGenerated(JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEvent) - Method in interface org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEventListener

onThumbnailGenerated(JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEvent) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataPreview

onToggle(CustomStateLessToggleButton.ToggledEvent) - Method in interface org.hkijena.jipipe.utils.CustomStateLessToggleButton.ToggledEventListener

onToolActivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.EllipseMaskDrawer2DTool

onToolActivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.FloodFillMaskDrawer2DTool

onToolActivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MouseMaskDrawer2DTool

onToolActivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PencilMaskDrawer2DTool

onToolActivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PolygonMaskDrawer2DTool

onToolActivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.RectangleMaskDrawer2DTool

onToolActivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIPicker2DTool

onToolActivate(ImageViewerPanelCanvas2D) - Method in interface org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2DTool

Executed on activation of this tool

onToolDeactivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.EllipseMaskDrawer2DTool

onToolDeactivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.FloodFillMaskDrawer2DTool

onToolDeactivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MouseMaskDrawer2DTool

onToolDeactivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PencilMaskDrawer2DTool

onToolDeactivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PolygonMaskDrawer2DTool

onToolDeactivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.RectangleMaskDrawer2DTool

onToolDeactivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIPicker2DTool

onToolDeactivate(ImageViewerPanelCanvas2D) - Method in interface org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2DTool

Executed on deactivation of this tool

onUpdated(JIPipeDesktopSplitPane, int) - Method in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.DynamicSidebarRatio

onUpdated(JIPipeDesktopSplitPane, int) - Method in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.FixedRatio

onUpdated(JIPipeDesktopSplitPane, int) - Method in interface org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.Ratio

onViewPortZoomChanged(JIPipeDesktopZoomViewPort.ZoomChangedEvent) - Method in interface org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopZoomViewPort.ZoomChangedEventListener

onWindowClosed(WindowClosedEvent) - Method in interface org.hkijena.jipipe.desktop.commons.events.WindowClosedEventListener

onWindowClosed(WindowClosedEvent) - Method in class org.hkijena.jipipe.desktop.JIPipeDesktopMain.WindowWatcher

onWindowOpened(WindowOpenedEvent) - Method in interface org.hkijena.jipipe.desktop.commons.events.WindowOpenedEventListener

onWindowOpened(WindowOpenedEvent) - Method in class org.hkijena.jipipe.desktop.JIPipeDesktopMain.WindowWatcher

open(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage

open(String) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage

Opens the specified file element as stream.

open(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage

Opens the specified file element as stream.

open(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage

openApplicationSettings(String) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

openAuthorInfoWindow(Component, Collection<JIPipeAuthorMetadata>, JIPipeAuthorMetadata) - Static method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

Opens a list of authors in a window that displays information about them.

openCacheBrowser() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

OpenCacheBrowserInWindowUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

OpenCacheBrowserInWindowUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.OpenCacheBrowserInWindowUIContextAction

OpenCLKernelScript - Class in org.hkijena.jipipe.plugins.clij2.parameters

A OpenCL kernel script

OpenCLKernelScript() - Constructor for class org.hkijena.jipipe.plugins.clij2.parameters.OpenCLKernelScript

Creates a new instance

OpenCLKernelScript(OpenCLKernelScript) - Constructor for class org.hkijena.jipipe.plugins.clij2.parameters.OpenCLKernelScript

Makes a copy

OpenContainingFolderDataImportOperation - Class in org.hkijena.jipipe.plugins.core.data

Import operation that opens the containing folder.

OpenContainingFolderDataImportOperation() - Constructor for class org.hkijena.jipipe.plugins.core.data.OpenContainingFolderDataImportOperation

openContextMenu(Point) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Opens the context menu at the location.

OpenCvBorderType - Enum in org.hkijena.jipipe.plugins.opencv.utils

OpenCvDepth - Enum in org.hkijena.jipipe.plugins.opencv.utils

OpenCvImageData - Class in org.hkijena.jipipe.plugins.opencv.datatypes

OpenCvImageData(opencv_core.Mat) - Constructor for class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

OpenCvImageData(Map<ImageSliceIndex, opencv_core.Mat>) - Constructor for class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

OpenCvImageData(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

OpenCvImageData(opencv_core.MatVector, int, int, int) - Constructor for class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

OpenCvImageData(OpenCvImageData) - Constructor for class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

OpenCvImageDataViewer - Class in org.hkijena.jipipe.plugins.opencv.viewers

OpenCvImageDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.opencv.viewers.OpenCvImageDataViewer

OpenCvImageUtils - Class in org.hkijena.jipipe.plugins.opencv.utils

OpenCvPlugin - Class in org.hkijena.jipipe.plugins.opencv

Python nodes

OpenCvPlugin() - Constructor for class org.hkijena.jipipe.plugins.opencv.OpenCvPlugin

OpenCvToImageJDataTypeConverter - Class in org.hkijena.jipipe.plugins.opencv.datatypes

OpenCvToImageJDataTypeConverter() - Constructor for class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvToImageJDataTypeConverter

OpenCvType - Enum in org.hkijena.jipipe.plugins.opencv.utils

openDirectories(Component, JIPipeWorkbench, JIPipeFileChooserApplicationSettings.LastDirectoryKey, String, HTMLText) - Static method in class org.hkijena.jipipe.desktop.JIPipeDesktop

Lets the user choose multiple directories

openDirectory(Component, JIPipeWorkbench, JIPipeFileChooserApplicationSettings.LastDirectoryKey, String, HTMLText) - Static method in class org.hkijena.jipipe.desktop.JIPipeDesktop

Lets the user choose a directory

openFile(Component, JIPipeWorkbench, JIPipeFileChooserApplicationSettings.LastDirectoryKey, String, HTMLText, FileNameExtensionFilter...) - Static method in class org.hkijena.jipipe.desktop.JIPipeDesktop

Lets the user choose a file

openFileInNative(Path) - Static method in class org.hkijena.jipipe.utils.UIUtils

Opens a website with given URL

openFiles(Component, JIPipeWorkbench, JIPipeFileChooserApplicationSettings.LastDirectoryKey, String, HTMLText, FileNameExtensionFilter...) - Static method in class org.hkijena.jipipe.desktop.JIPipeDesktop

Lets the user choose multiple files

openGroupNodeGraph(JIPipeDesktopWorkbench, JIPipeNodeGroup, boolean) - Static method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.groups.JIPipeDesktopNodeGroupUI

Opens the graph editor for specified compartment

OpenImageJConsoleTool - Class in org.hkijena.jipipe.plugins.tools

OpenImageJConsoleTool(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.tools.OpenImageJConsoleTool

Creates a new instance

OpenImageJTool - Class in org.hkijena.jipipe.plugins.tools

OpenImageJTool(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.tools.OpenImageJTool

Creates a new instance

OpenImageJUpdateManagerTool - Class in org.hkijena.jipipe.plugins.tools

OpenImageJUpdateManagerTool(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.tools.OpenImageJUpdateManagerTool

Creates a new instance

OpenInImageJ3DViewerDataDisplayOperation - Class in org.hkijena.jipipe.plugins.imagejdatatypes.display

OpenInImageJ3DViewerDataDisplayOperation() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInImageJ3DViewerDataDisplayOperation

OpenInImageJDataDisplayOperation - Class in org.hkijena.jipipe.plugins.imagejdatatypes.display

OpenInImageJDataDisplayOperation() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInImageJDataDisplayOperation

OpenInNapariDataDisplayOperation - Class in org.hkijena.jipipe.plugins.imagejdatatypes.display

OpenInNapariDataDisplayOperation() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.display.OpenInNapariDataDisplayOperation

OpenInNativeApplicationDataImportOperation - Class in org.hkijena.jipipe.plugins.core.data

OpenInNativeApplicationDataImportOperation(String, String, String[]) - Constructor for class org.hkijena.jipipe.plugins.core.data.OpenInNativeApplicationDataImportOperation

OpenInNativeApplicationDataImportOperation(String...) - Constructor for class org.hkijena.jipipe.plugins.core.data.OpenInNativeApplicationDataImportOperation

openNewToolBoxWindow(JIPipeDesktopWorkbench, Component) - Static method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopLegacyAddNodePanel

openNewToolBoxWindow(JIPipeDesktopWorkbench) - Static method in class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplateBox

openNewWindow(JIPipeDesktopWorkbench) - Static method in class org.hkijena.jipipe.desktop.app.backups.JIPipeDesktopBackupManagerPanel

openNotificationsDialog(JIPipeDesktopWorkbench, Component, JIPipeNotificationInbox, String, String, boolean) - Static method in class org.hkijena.jipipe.utils.UIUtils

openPath(Component, JIPipeWorkbench, JIPipeFileChooserApplicationSettings.LastDirectoryKey, String, HTMLText, FileNameExtensionFilter...) - Static method in class org.hkijena.jipipe.desktop.JIPipeDesktop

Lets the user choose a file or directory

OpenPathDataDisplayOperation - Class in org.hkijena.jipipe.plugins.filesystem.resultanalysis

OpenPathDataDisplayOperation() - Constructor for class org.hkijena.jipipe.plugins.filesystem.resultanalysis.OpenPathDataDisplayOperation

openPaths(Component, JIPipeWorkbench, JIPipeFileChooserApplicationSettings.LastDirectoryKey, String, HTMLText, FileNameExtensionFilter...) - Static method in class org.hkijena.jipipe.desktop.JIPipeDesktop

Lets the user choose multiple files or directories

OpenPlotInJIPipeDataDisplayOperation - Class in org.hkijena.jipipe.plugins.plots.ui.resultanalysis

OpenPlotInJIPipeDataDisplayOperation() - Constructor for class org.hkijena.jipipe.plugins.plots.ui.resultanalysis.OpenPlotInJIPipeDataDisplayOperation

openProject(Path, boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

Opens a project from a file or folder Asks the user if it should replace the currently displayed project

openProject() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

Opens a file chooser where the user can select a project file

openProjectAndOutput() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

Opens a file chooser where the user can select a result folder

openProjectReport() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

openProjectSettings(String) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

OpenResultsTableInImageJDataDisplayOperation - Class in org.hkijena.jipipe.plugins.tables.display

OpenResultsTableInImageJDataDisplayOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.display.OpenResultsTableInImageJDataDisplayOperation

OpenResultsTableInJIPipeTabDataDisplayOperation - Class in org.hkijena.jipipe.plugins.tables.display

OpenResultsTableInJIPipeTabDataDisplayOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.display.OpenResultsTableInJIPipeTabDataDisplayOperation

openROIs(IMetadata, ImagePlus[]) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIHandler

Look for ROIs in the given OMEXMLMetadata; if any are present, apply them to the given images and display them in the ROI manager.

openROIs(IMetadata, ImagePlus[], boolean) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIHandler

Opens the rois and converts them into ImageJ Rois.

openWebsite(String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Opens a website with given URL

openWindow(JIPipeDesktopProjectWorkbench, String) - Static method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerUI

openWindow(JIPipeDesktopWorkbench, String) - Static method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

Creates a new plot editor in a new window

openWindow(JIPipeDesktopWorkbench, ResultsTableData, String) - Static method in class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopTableEditor

Shows table data in a new window

OperationNode(JIPipeExpressionCustomASTParser.ASTNode, JIPipeExpressionCustomASTParser.ASTNode, String) - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.OperationNode

OPERATOR_AND_SYMBOL - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_AND_TEXT - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_ELEMENT_ACCESS_SYMBOL - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_ELEMENT_ACCESS_TEXT - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_NEGATE_SYMBOL - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_NEGATE_TEXT - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_NUMERIC_DIVIDE - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_NUMERIC_EQUALS - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_NUMERIC_EQUALS_TEXT - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_NUMERIC_EXPONENT - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_NUMERIC_GREATER_THAN - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_NUMERIC_GREATER_THAN_OR_EQUAL - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_NUMERIC_LESS_THAN - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_NUMERIC_LESS_THAN_OR_EQUAL - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_NUMERIC_MINUS - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_NUMERIC_MODULO - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_NUMERIC_MULTIPLY - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_NUMERIC_NEGATE - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_NUMERIC_NEGATE_HIGH - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_NUMERIC_STRING_PLUS - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_NUMERIC_UNEQUALS - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_NUMERIC_UNEQUALS_TEXT - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_OR_SYMBOL - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_OR_TEXT - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_PAIR - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_STATEMENT - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_STRING_CONTAINS - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_STRING_CONTAINS2 - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_VARIABLE_EXISTS - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_VARIABLE_RESOLVE - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OPERATOR_XOR_TEXT - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

OperatorSelectorList - Class in org.hkijena.jipipe.plugins.expressions

Panel that allows the user to select an ExpressionOperator

OperatorSelectorList(ExpressionEvaluator) - Constructor for class org.hkijena.jipipe.plugins.expressions.OperatorSelectorList

OperatorSelectorList.ExpressionOperatorRenderer - Class in org.hkijena.jipipe.plugins.expressions

opticFlow(FloatProcessor, FloatProcessor, FloatProcessor, FloatProcessor) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm

opticFlow(FloatProcessor, FloatProcessor, FloatProcessor, FloatProcessor) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm

opticFlow(FloatProcessor, FloatProcessor, FloatProcessor, FloatProcessor) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm

optional() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeInputSlot

OptionalBitDepth - Enum in org.hkijena.jipipe.plugins.imagejdatatypes.util

Enum of ImageJ bit depths

OptionalBitDepthEnumItemInfo - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

OptionalBitDepthEnumItemInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.OptionalBitDepthEnumItemInfo

OptionalBooleanParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.optional

Optional Boolean

OptionalBooleanParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalBooleanParameter

Creates a new instance

OptionalBooleanParameter(OptionalBooleanParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalBooleanParameter

Creates a copy

OptionalByteParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.optional

Optional Byte

OptionalByteParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalByteParameter

Creates a new instance

OptionalByteParameter(OptionalByteParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalByteParameter

Creates a copy

OptionalColorMapParameter - Class in org.hkijena.jipipe.plugins.parameters.library.colors

Optional ColorMap

OptionalColorMapParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.colors.OptionalColorMapParameter

Creates a new instance

OptionalColorMapParameter(OptionalColorMapParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.colors.OptionalColorMapParameter

Creates a copy

OptionalColorParameter - Class in org.hkijena.jipipe.plugins.parameters.library.colors

Optional Color

OptionalColorParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.colors.OptionalColorParameter

Creates a new instance

OptionalColorParameter(Color, boolean) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.colors.OptionalColorParameter

OptionalColorParameter(OptionalColorParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.colors.OptionalColorParameter

Creates a copy

OptionalDataAnnotationNameParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.optional

Parameter used for creating annotations

OptionalDataAnnotationNameParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalDataAnnotationNameParameter

OptionalDataAnnotationNameParameter(OptionalStringParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalDataAnnotationNameParameter

OptionalDataAnnotationNameParameter(String, boolean) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalDataAnnotationNameParameter

OptionalDataInfoRefParameter - Class in org.hkijena.jipipe.plugins.parameters.library.references

OptionalDataInfoRefParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.OptionalDataInfoRefParameter

OptionalDataInfoRefParameter(boolean, JIPipeDataInfoRef) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.OptionalDataInfoRefParameter

OptionalDataInfoRefParameter(OptionalDataInfoRefParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.OptionalDataInfoRefParameter

OptionalDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.api.optional

Generic parameter for OptionalParameter

OptionalDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalDesktopParameterEditorUI

OptionalDoubleParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.optional

Optional Double

OptionalDoubleParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalDoubleParameter

Creates a new instance

OptionalDoubleParameter(OptionalDoubleParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalDoubleParameter

Creates a copy

OptionalDoubleParameter(double, boolean) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalDoubleParameter

OptionalFloatParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.optional

Optional Float

OptionalFloatParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalFloatParameter

Creates a new instance

OptionalFloatParameter(boolean, float) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalFloatParameter

Creates a new instance

OptionalFloatParameter(OptionalFloatParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalFloatParameter

Creates a copy

OptionalIlastikEnvironment - Class in org.hkijena.jipipe.plugins.ilastik.environments

OptionalIlastikEnvironment() - Constructor for class org.hkijena.jipipe.plugins.ilastik.environments.OptionalIlastikEnvironment

OptionalIlastikEnvironment(OptionalIlastikEnvironment) - Constructor for class org.hkijena.jipipe.plugins.ilastik.environments.OptionalIlastikEnvironment

OptionalIntegerParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.optional

Optional Integer

OptionalIntegerParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalIntegerParameter

Creates a new instance

OptionalIntegerParameter(boolean, int) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalIntegerParameter

OptionalIntegerParameter(OptionalIntegerParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalIntegerParameter

Creates a copy

OptionalIntegerRange - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.optional

OptionalIntegerRange() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalIntegerRange

OptionalIntegerRange(IntegerRange, boolean) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalIntegerRange

OptionalIntegerRange(OptionalIntegerRange) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalIntegerRange

OptionalIntModificationParameter - Class in org.hkijena.jipipe.plugins.parameters.library.roi

An optional NumericFunctionExpression

OptionalIntModificationParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.OptionalIntModificationParameter

OptionalIntModificationParameter(OptionalIntModificationParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.OptionalIntModificationParameter

OptionalJIPipeAuthorMetadata - Class in org.hkijena.jipipe.api

OptionalJIPipeAuthorMetadata() - Constructor for class org.hkijena.jipipe.api.OptionalJIPipeAuthorMetadata

OptionalJIPipeAuthorMetadata(OptionalJIPipeAuthorMetadata) - Constructor for class org.hkijena.jipipe.api.OptionalJIPipeAuthorMetadata

OptionalJIPipeAuthorMetadata.List - Class in org.hkijena.jipipe.api

OptionalJIPipeDataDirectoryEnvironment - Class in org.hkijena.jipipe.plugins.dataenvironment

OptionalJIPipeDataDirectoryEnvironment() - Constructor for class org.hkijena.jipipe.plugins.dataenvironment.OptionalJIPipeDataDirectoryEnvironment

OptionalJIPipeDataDirectoryEnvironment(OptionalJIPipeDataDirectoryEnvironment) - Constructor for class org.hkijena.jipipe.plugins.dataenvironment.OptionalJIPipeDataDirectoryEnvironment

OptionalJIPipeExpressionParameter - Class in org.hkijena.jipipe.plugins.expressions

OptionalJIPipeExpressionParameter() - Constructor for class org.hkijena.jipipe.plugins.expressions.OptionalJIPipeExpressionParameter

OptionalJIPipeExpressionParameter(boolean, String) - Constructor for class org.hkijena.jipipe.plugins.expressions.OptionalJIPipeExpressionParameter

OptionalJIPipeExpressionParameter(OptionalParameter<JIPipeExpressionParameter>) - Constructor for class org.hkijena.jipipe.plugins.expressions.OptionalJIPipeExpressionParameter

OptionalJIPipeExpressionParameter.Deserializer - Class in org.hkijena.jipipe.plugins.expressions

Deserializes the parameter

OptionalJIPipePythonAdapterLibraryEnvironment - Class in org.hkijena.jipipe.plugins.python.adapter

An optional JIPipePythonAdapterLibraryEnvironment

OptionalJIPipePythonAdapterLibraryEnvironment() - Constructor for class org.hkijena.jipipe.plugins.python.adapter.OptionalJIPipePythonAdapterLibraryEnvironment

OptionalJIPipePythonAdapterLibraryEnvironment(JIPipePythonAdapterLibraryEnvironment) - Constructor for class org.hkijena.jipipe.plugins.python.adapter.OptionalJIPipePythonAdapterLibraryEnvironment

OptionalJIPipePythonAdapterLibraryEnvironment(OptionalJIPipePythonAdapterLibraryEnvironment) - Constructor for class org.hkijena.jipipe.plugins.python.adapter.OptionalJIPipePythonAdapterLibraryEnvironment

OptionalLongParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.optional

Optional Long

OptionalLongParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalLongParameter

Creates a new instance

OptionalLongParameter(OptionalLongParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalLongParameter

Creates a copy

OptionalNodeInfoRefParameter - Class in org.hkijena.jipipe.plugins.parameters.library.references

OptionalNodeInfoRefParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.OptionalNodeInfoRefParameter

OptionalNodeInfoRefParameter(OptionalNodeInfoRefParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.OptionalNodeInfoRefParameter

OptionalOMEROCredentialsEnvironment - Class in org.hkijena.jipipe.plugins.omero

OptionalOMEROCredentialsEnvironment() - Constructor for class org.hkijena.jipipe.plugins.omero.OptionalOMEROCredentialsEnvironment

OptionalOMEROCredentialsEnvironment(OptionalParameter<OMEROCredentialsEnvironment>) - Constructor for class org.hkijena.jipipe.plugins.omero.OptionalOMEROCredentialsEnvironment

OptionalParameter<T> - Class in org.hkijena.jipipe.plugins.parameters.api.optional

A parameter that is optional

OptionalParameter(Class<T>) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameter

OptionalParameter(OptionalParameter<T>) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameter

Produces a shallow copy You have to implement deep content copying yourself

OptionalParameter.Deserializer<T> - Class in org.hkijena.jipipe.plugins.parameters.api.optional

Deserializes the parameter

OptionalParameter.Serializer - Class in org.hkijena.jipipe.plugins.parameters.api.optional

Serializes the parameter

OptionalParameterContentAccess<T> - Class in org.hkijena.jipipe.plugins.parameters.api.optional

Parameter access for the key entry in PairParameter

OptionalParameterContentAccess(JIPipeParameterAccess, OptionalParameter<T>) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

Creates a new instance

OptionalPathParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.optional

Optional Path

OptionalPathParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalPathParameter

Creates a new instance

OptionalPathParameter(Path, boolean) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalPathParameter

OptionalPathParameter(OptionalPathParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalPathParameter

Creates a copy

OptionalProcessEnvironment - Class in org.hkijena.jipipe.plugins.processes

An optional ProcessEnvironment

OptionalProcessEnvironment() - Constructor for class org.hkijena.jipipe.plugins.processes.OptionalProcessEnvironment

OptionalProcessEnvironment(ProcessEnvironment) - Constructor for class org.hkijena.jipipe.plugins.processes.OptionalProcessEnvironment

OptionalProcessEnvironment(OptionalProcessEnvironment) - Constructor for class org.hkijena.jipipe.plugins.processes.OptionalProcessEnvironment

OptionalPythonEnvironment - Class in org.hkijena.jipipe.plugins.python

An optional PythonEnvironment

OptionalPythonEnvironment() - Constructor for class org.hkijena.jipipe.plugins.python.OptionalPythonEnvironment

OptionalPythonEnvironment(PythonEnvironment) - Constructor for class org.hkijena.jipipe.plugins.python.OptionalPythonEnvironment

OptionalPythonEnvironment(OptionalPythonEnvironment) - Constructor for class org.hkijena.jipipe.plugins.python.OptionalPythonEnvironment

OptionalQuantity - Class in org.hkijena.jipipe.plugins.parameters.library.quantities

OptionalQuantity() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.quantities.OptionalQuantity

OptionalQuantity(Quantity, boolean) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.quantities.OptionalQuantity

OptionalQuantity(OptionalQuantity) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.quantities.OptionalQuantity

OptionalREnvironment - Class in org.hkijena.jipipe.plugins.r

An optional REnvironment

OptionalREnvironment() - Constructor for class org.hkijena.jipipe.plugins.r.OptionalREnvironment

OptionalREnvironment(REnvironment) - Constructor for class org.hkijena.jipipe.plugins.r.OptionalREnvironment

OptionalREnvironment(OptionalREnvironment) - Constructor for class org.hkijena.jipipe.plugins.r.OptionalREnvironment

OptionalShortParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.optional

Optional Short

OptionalShortParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalShortParameter

Creates a new instance

OptionalShortParameter(OptionalShortParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalShortParameter

Creates a copy

OptionalStringParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.optional

Optional String

OptionalStringParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalStringParameter

Creates a new instance

OptionalStringParameter(OptionalStringParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalStringParameter

Creates a copy

OptionalStringParameter(String, boolean) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalStringParameter

OptionalTesseractOCREnvironment - Class in org.hkijena.jipipe.plugins.ijocr.environments

OptionalTesseractOCREnvironment() - Constructor for class org.hkijena.jipipe.plugins.ijocr.environments.OptionalTesseractOCREnvironment

OptionalTesseractOCREnvironment(OptionalTesseractOCREnvironment) - Constructor for class org.hkijena.jipipe.plugins.ijocr.environments.OptionalTesseractOCREnvironment

OptionalTextAnnotationNameParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.optional

Parameter used for creating annotations

OptionalTextAnnotationNameParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter

OptionalTextAnnotationNameParameter(OptionalStringParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter

OptionalTextAnnotationNameParameter(String, boolean) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter

OptionalTSOAXEnvironment - Class in org.hkijena.jipipe.plugins.ijfilaments.environments

OptionalTSOAXEnvironment() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.environments.OptionalTSOAXEnvironment

OptionalTSOAXEnvironment(OptionalTSOAXEnvironment) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.environments.OptionalTSOAXEnvironment

OptionalVector2dParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.vectors

OptionalVector2dParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.OptionalVector2dParameter

OptionalVector2dParameter(Vector2dParameter, boolean) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.OptionalVector2dParameter

OptionalVector2dParameter(OptionalVector2dParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.OptionalVector2dParameter

OptionalVector2iParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.vectors

OptionalVector2iParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.OptionalVector2iParameter

OptionalVector2iParameter(Vector2iParameter, boolean) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.OptionalVector2iParameter

OptionalVector2iParameter(OptionalVector2iParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.OptionalVector2iParameter

OptionalVector3dParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.vectors

OptionalVector3dParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.OptionalVector3dParameter

OptionalVector3dParameter(Vector3dParameter, boolean) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.OptionalVector3dParameter

OptionalVector3dParameter(OptionalVector3dParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.OptionalVector3dParameter

OptionalVector3iParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.vectors

OptionalVector3iParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.OptionalVector3iParameter

OptionalVector3iParameter(Vector3iParameter, boolean) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.OptionalVector3iParameter

OptionalVector3iParameter(OptionalVector3iParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.OptionalVector3iParameter

OPTIONS - Static variable in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopMarkdownReader

orElse(double) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalDoubleParameter

orElse(int) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalIntegerParameter

orElse(Path, Path) - Static method in class org.hkijena.jipipe.utils.PathUtils

Returns the first path if it exists or the alternative path if it doesn't

orElse(Object, String) - Static method in class org.hkijena.jipipe.utils.StringUtils

Returns the string if its not null or empty or the alternative

org.hkijena.jipipe - package org.hkijena.jipipe

org.hkijena.jipipe.api - package org.hkijena.jipipe.api

org.hkijena.jipipe.api.annotation - package org.hkijena.jipipe.api.annotation

org.hkijena.jipipe.api.artifacts - package org.hkijena.jipipe.api.artifacts

org.hkijena.jipipe.api.backups - package org.hkijena.jipipe.api.backups

org.hkijena.jipipe.api.cache - package org.hkijena.jipipe.api.cache

org.hkijena.jipipe.api.compartments - package org.hkijena.jipipe.api.compartments

org.hkijena.jipipe.api.compartments.algorithms - package org.hkijena.jipipe.api.compartments.algorithms

org.hkijena.jipipe.api.compartments.datatypes - package org.hkijena.jipipe.api.compartments.datatypes

org.hkijena.jipipe.api.compat - package org.hkijena.jipipe.api.compat

org.hkijena.jipipe.api.compat.ui - package org.hkijena.jipipe.api.compat.ui

org.hkijena.jipipe.api.data - package org.hkijena.jipipe.api.data

org.hkijena.jipipe.api.data.browser - package org.hkijena.jipipe.api.data.browser

org.hkijena.jipipe.api.data.context - package org.hkijena.jipipe.api.data.context

org.hkijena.jipipe.api.data.serialization - package org.hkijena.jipipe.api.data.serialization

org.hkijena.jipipe.api.data.sources - package org.hkijena.jipipe.api.data.sources

org.hkijena.jipipe.api.data.storage - package org.hkijena.jipipe.api.data.storage

org.hkijena.jipipe.api.data.thumbnails - package org.hkijena.jipipe.api.data.thumbnails

org.hkijena.jipipe.api.data.utils - package org.hkijena.jipipe.api.data.utils

org.hkijena.jipipe.api.environments - package org.hkijena.jipipe.api.environments

org.hkijena.jipipe.api.events - package org.hkijena.jipipe.api.events

org.hkijena.jipipe.api.grapheditortool - package org.hkijena.jipipe.api.grapheditortool

org.hkijena.jipipe.api.grouping - package org.hkijena.jipipe.api.grouping

org.hkijena.jipipe.api.grouping.events - package org.hkijena.jipipe.api.grouping.events

org.hkijena.jipipe.api.grouping.parameters - package org.hkijena.jipipe.api.grouping.parameters

org.hkijena.jipipe.api.history - package org.hkijena.jipipe.api.history

org.hkijena.jipipe.api.looping - package org.hkijena.jipipe.api.looping

org.hkijena.jipipe.api.nodes - package org.hkijena.jipipe.api.nodes

org.hkijena.jipipe.api.nodes.algorithm - package org.hkijena.jipipe.api.nodes.algorithm

org.hkijena.jipipe.api.nodes.annotation - package org.hkijena.jipipe.api.nodes.annotation

org.hkijena.jipipe.api.nodes.categories - package org.hkijena.jipipe.api.nodes.categories

org.hkijena.jipipe.api.nodes.database - package org.hkijena.jipipe.api.nodes.database

org.hkijena.jipipe.api.nodes.infos - package org.hkijena.jipipe.api.nodes.infos

org.hkijena.jipipe.api.nodes.iterationstep - package org.hkijena.jipipe.api.nodes.iterationstep

org.hkijena.jipipe.api.notifications - package org.hkijena.jipipe.api.notifications

org.hkijena.jipipe.api.parameters - package org.hkijena.jipipe.api.parameters

org.hkijena.jipipe.api.project - package org.hkijena.jipipe.api.project

org.hkijena.jipipe.api.registries - package org.hkijena.jipipe.api.registries

org.hkijena.jipipe.api.run - package org.hkijena.jipipe.api.run

org.hkijena.jipipe.api.runtimepartitioning - package org.hkijena.jipipe.api.runtimepartitioning

org.hkijena.jipipe.api.settings - package org.hkijena.jipipe.api.settings

org.hkijena.jipipe.api.validation - package org.hkijena.jipipe.api.validation

org.hkijena.jipipe.api.validation.contexts - package org.hkijena.jipipe.api.validation.contexts

org.hkijena.jipipe.cli - package org.hkijena.jipipe.cli

org.hkijena.jipipe.desktop - package org.hkijena.jipipe.desktop

org.hkijena.jipipe.desktop.api - package org.hkijena.jipipe.desktop.api

org.hkijena.jipipe.desktop.api.data - package org.hkijena.jipipe.desktop.api.data

org.hkijena.jipipe.desktop.api.dataviewer - package org.hkijena.jipipe.desktop.api.dataviewer

org.hkijena.jipipe.desktop.api.environments - package org.hkijena.jipipe.desktop.api.environments

org.hkijena.jipipe.desktop.api.nodes - package org.hkijena.jipipe.desktop.api.nodes

org.hkijena.jipipe.desktop.api.registries - package org.hkijena.jipipe.desktop.api.registries

org.hkijena.jipipe.desktop.app - package org.hkijena.jipipe.desktop.app

org.hkijena.jipipe.desktop.app.backups - package org.hkijena.jipipe.desktop.app.backups

org.hkijena.jipipe.desktop.app.batchassistant - package org.hkijena.jipipe.desktop.app.batchassistant

org.hkijena.jipipe.desktop.app.bookmarks - package org.hkijena.jipipe.desktop.app.bookmarks

org.hkijena.jipipe.desktop.app.cache - package org.hkijena.jipipe.desktop.app.cache

org.hkijena.jipipe.desktop.app.cache.cachetree - package org.hkijena.jipipe.desktop.app.cache.cachetree

org.hkijena.jipipe.desktop.app.cache.exporters - package org.hkijena.jipipe.desktop.app.cache.exporters

org.hkijena.jipipe.desktop.app.cache.importers - package org.hkijena.jipipe.desktop.app.cache.importers

org.hkijena.jipipe.desktop.app.cache.renderers - package org.hkijena.jipipe.desktop.app.cache.renderers

org.hkijena.jipipe.desktop.app.compat - package org.hkijena.jipipe.desktop.app.compat

org.hkijena.jipipe.desktop.app.components - package org.hkijena.jipipe.desktop.app.components

org.hkijena.jipipe.desktop.app.datatable - package org.hkijena.jipipe.desktop.app.datatable

org.hkijena.jipipe.desktop.app.datatracer - package org.hkijena.jipipe.desktop.app.datatracer

org.hkijena.jipipe.desktop.app.documentation - package org.hkijena.jipipe.desktop.app.documentation

org.hkijena.jipipe.desktop.app.grapheditor - package org.hkijena.jipipe.desktop.app.grapheditor

org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel - package org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel

org.hkijena.jipipe.desktop.app.grapheditor.commons - package org.hkijena.jipipe.desktop.app.grapheditor.commons

org.hkijena.jipipe.desktop.app.grapheditor.commons.actions - package org.hkijena.jipipe.desktop.app.grapheditor.commons.actions

org.hkijena.jipipe.desktop.app.grapheditor.commons.connections - package org.hkijena.jipipe.desktop.app.grapheditor.commons.connections

org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu - package org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation - package org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation

org.hkijena.jipipe.desktop.app.grapheditor.commons.layout - package org.hkijena.jipipe.desktop.app.grapheditor.commons.layout

org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui - package org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui

org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers - package org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers

org.hkijena.jipipe.desktop.app.grapheditor.commons.properties - package org.hkijena.jipipe.desktop.app.grapheditor.commons.properties

org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments - package org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments

org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.actions - package org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.actions

org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu - package org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu

org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.dragdrop - package org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.dragdrop

org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.properties - package org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.properties

org.hkijena.jipipe.desktop.app.grapheditor.flavors.groups - package org.hkijena.jipipe.desktop.app.grapheditor.flavors.groups

org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline - package org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline

org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.actions - package org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.actions

org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu - package org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu

org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.dragdrop - package org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.dragdrop

org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.properties - package org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.properties

org.hkijena.jipipe.desktop.app.grapheditor.nodefinder - package org.hkijena.jipipe.desktop.app.grapheditor.nodefinder

org.hkijena.jipipe.desktop.app.history - package org.hkijena.jipipe.desktop.app.history

org.hkijena.jipipe.desktop.app.parameterreference - package org.hkijena.jipipe.desktop.app.parameterreference

org.hkijena.jipipe.desktop.app.ploteditor - package org.hkijena.jipipe.desktop.app.ploteditor

org.hkijena.jipipe.desktop.app.plugins - package org.hkijena.jipipe.desktop.app.plugins

org.hkijena.jipipe.desktop.app.plugins.artifactsmanager - package org.hkijena.jipipe.desktop.app.plugins.artifactsmanager

org.hkijena.jipipe.desktop.app.plugins.pluginsmanager - package org.hkijena.jipipe.desktop.app.plugins.pluginsmanager

org.hkijena.jipipe.desktop.app.project - package org.hkijena.jipipe.desktop.app.project

org.hkijena.jipipe.desktop.app.project.templatedownloader - package org.hkijena.jipipe.desktop.app.project.templatedownloader

org.hkijena.jipipe.desktop.app.quickrun - package org.hkijena.jipipe.desktop.app.quickrun

org.hkijena.jipipe.desktop.app.resultanalysis - package org.hkijena.jipipe.desktop.app.resultanalysis

org.hkijena.jipipe.desktop.app.resultanalysis.renderers - package org.hkijena.jipipe.desktop.app.resultanalysis.renderers

org.hkijena.jipipe.desktop.app.running - package org.hkijena.jipipe.desktop.app.running

org.hkijena.jipipe.desktop.app.running.logs - package org.hkijena.jipipe.desktop.app.running.logs

org.hkijena.jipipe.desktop.app.running.queue - package org.hkijena.jipipe.desktop.app.running.queue

org.hkijena.jipipe.desktop.app.settings - package org.hkijena.jipipe.desktop.app.settings

org.hkijena.jipipe.desktop.app.settings.project - package org.hkijena.jipipe.desktop.app.settings.project

org.hkijena.jipipe.desktop.app.tableeditor - package org.hkijena.jipipe.desktop.app.tableeditor

org.hkijena.jipipe.desktop.commons.components - package org.hkijena.jipipe.desktop.commons.components

org.hkijena.jipipe.desktop.commons.components.filechoosernext - package org.hkijena.jipipe.desktop.commons.components.filechoosernext

org.hkijena.jipipe.desktop.commons.components.icons - package org.hkijena.jipipe.desktop.commons.components.icons

org.hkijena.jipipe.desktop.commons.components.layouts - package org.hkijena.jipipe.desktop.commons.components.layouts

org.hkijena.jipipe.desktop.commons.components.markup - package org.hkijena.jipipe.desktop.commons.components.markup

org.hkijena.jipipe.desktop.commons.components.parameters - package org.hkijena.jipipe.desktop.commons.components.parameters

org.hkijena.jipipe.desktop.commons.components.pickers - package org.hkijena.jipipe.desktop.commons.components.pickers

org.hkijena.jipipe.desktop.commons.components.renderers - package org.hkijena.jipipe.desktop.commons.components.renderers

org.hkijena.jipipe.desktop.commons.components.ribbon - package org.hkijena.jipipe.desktop.commons.components.ribbon

org.hkijena.jipipe.desktop.commons.components.search - package org.hkijena.jipipe.desktop.commons.components.search

org.hkijena.jipipe.desktop.commons.components.tabs - package org.hkijena.jipipe.desktop.commons.components.tabs

org.hkijena.jipipe.desktop.commons.components.window - package org.hkijena.jipipe.desktop.commons.components.window

org.hkijena.jipipe.desktop.commons.events - package org.hkijena.jipipe.desktop.commons.events

org.hkijena.jipipe.desktop.commons.notifications - package org.hkijena.jipipe.desktop.commons.notifications

org.hkijena.jipipe.desktop.commons.theme - package org.hkijena.jipipe.desktop.commons.theme

org.hkijena.jipipe.plugins - package org.hkijena.jipipe.plugins

org.hkijena.jipipe.plugins.annotation - package org.hkijena.jipipe.plugins.annotation

org.hkijena.jipipe.plugins.annotation.algorithms - package org.hkijena.jipipe.plugins.annotation.algorithms

org.hkijena.jipipe.plugins.annotation.datasources - package org.hkijena.jipipe.plugins.annotation.datasources

org.hkijena.jipipe.plugins.artifacts - package org.hkijena.jipipe.plugins.artifacts

org.hkijena.jipipe.plugins.batchassistant - package org.hkijena.jipipe.plugins.batchassistant

org.hkijena.jipipe.plugins.cellpose - package org.hkijena.jipipe.plugins.cellpose

org.hkijena.jipipe.plugins.cellpose.algorithms - package org.hkijena.jipipe.plugins.cellpose.algorithms

org.hkijena.jipipe.plugins.cellpose.algorithms.cp2 - package org.hkijena.jipipe.plugins.cellpose.algorithms.cp2

org.hkijena.jipipe.plugins.cellpose.algorithms.cp3 - package org.hkijena.jipipe.plugins.cellpose.algorithms.cp3

org.hkijena.jipipe.plugins.cellpose.datatypes - package org.hkijena.jipipe.plugins.cellpose.datatypes

org.hkijena.jipipe.plugins.cellpose.legacy - package org.hkijena.jipipe.plugins.cellpose.legacy

org.hkijena.jipipe.plugins.cellpose.legacy.algorithms - package org.hkijena.jipipe.plugins.cellpose.legacy.algorithms

org.hkijena.jipipe.plugins.cellpose.legacy.compat - package org.hkijena.jipipe.plugins.cellpose.legacy.compat

org.hkijena.jipipe.plugins.cellpose.legacy.datatypes - package org.hkijena.jipipe.plugins.cellpose.legacy.datatypes

org.hkijena.jipipe.plugins.cellpose.legacy.parameters - package org.hkijena.jipipe.plugins.cellpose.legacy.parameters

org.hkijena.jipipe.plugins.cellpose.parameters - package org.hkijena.jipipe.plugins.cellpose.parameters

org.hkijena.jipipe.plugins.cellpose.parameters.cp2 - package org.hkijena.jipipe.plugins.cellpose.parameters.cp2

org.hkijena.jipipe.plugins.cellpose.parameters.cp3 - package org.hkijena.jipipe.plugins.cellpose.parameters.cp3

org.hkijena.jipipe.plugins.cellpose.utils - package org.hkijena.jipipe.plugins.cellpose.utils

org.hkijena.jipipe.plugins.clij2 - package org.hkijena.jipipe.plugins.clij2

org.hkijena.jipipe.plugins.clij2.algorithms - package org.hkijena.jipipe.plugins.clij2.algorithms

org.hkijena.jipipe.plugins.clij2.compat - package org.hkijena.jipipe.plugins.clij2.compat

org.hkijena.jipipe.plugins.clij2.datatypes - package org.hkijena.jipipe.plugins.clij2.datatypes

org.hkijena.jipipe.plugins.clij2.parameters - package org.hkijena.jipipe.plugins.clij2.parameters

org.hkijena.jipipe.plugins.clij2.ui - package org.hkijena.jipipe.plugins.clij2.ui

org.hkijena.jipipe.plugins.clij2.viewers - package org.hkijena.jipipe.plugins.clij2.viewers

org.hkijena.jipipe.plugins.core - package org.hkijena.jipipe.plugins.core

org.hkijena.jipipe.plugins.core.data - package org.hkijena.jipipe.plugins.core.data

org.hkijena.jipipe.plugins.core.nodes - package org.hkijena.jipipe.plugins.core.nodes

org.hkijena.jipipe.plugins.core.viewers - package org.hkijena.jipipe.plugins.core.viewers

org.hkijena.jipipe.plugins.dataenvironment - package org.hkijena.jipipe.plugins.dataenvironment

org.hkijena.jipipe.plugins.dev - package org.hkijena.jipipe.plugins.dev

org.hkijena.jipipe.plugins.expressions - package org.hkijena.jipipe.plugins.expressions

org.hkijena.jipipe.plugins.expressions.constants - package org.hkijena.jipipe.plugins.expressions.constants

org.hkijena.jipipe.plugins.expressions.custom - package org.hkijena.jipipe.plugins.expressions.custom

org.hkijena.jipipe.plugins.expressions.functions - package org.hkijena.jipipe.plugins.expressions.functions

org.hkijena.jipipe.plugins.expressions.functions.collections - package org.hkijena.jipipe.plugins.expressions.functions.collections

org.hkijena.jipipe.plugins.expressions.functions.color - package org.hkijena.jipipe.plugins.expressions.functions.color

org.hkijena.jipipe.plugins.expressions.functions.control - package org.hkijena.jipipe.plugins.expressions.functions.control

org.hkijena.jipipe.plugins.expressions.functions.convert - package org.hkijena.jipipe.plugins.expressions.functions.convert

org.hkijena.jipipe.plugins.expressions.functions.datetime - package org.hkijena.jipipe.plugins.expressions.functions.datetime

org.hkijena.jipipe.plugins.expressions.functions.filesystem - package org.hkijena.jipipe.plugins.expressions.functions.filesystem

org.hkijena.jipipe.plugins.expressions.functions.functions - package org.hkijena.jipipe.plugins.expressions.functions.functions

org.hkijena.jipipe.plugins.expressions.functions.math - package org.hkijena.jipipe.plugins.expressions.functions.math

org.hkijena.jipipe.plugins.expressions.functions.quantities - package org.hkijena.jipipe.plugins.expressions.functions.quantities

org.hkijena.jipipe.plugins.expressions.functions.scripts - package org.hkijena.jipipe.plugins.expressions.functions.scripts

org.hkijena.jipipe.plugins.expressions.functions.statistics - package org.hkijena.jipipe.plugins.expressions.functions.statistics

org.hkijena.jipipe.plugins.expressions.functions.string - package org.hkijena.jipipe.plugins.expressions.functions.string

org.hkijena.jipipe.plugins.expressions.functions.util - package org.hkijena.jipipe.plugins.expressions.functions.util

org.hkijena.jipipe.plugins.expressions.functions.variables - package org.hkijena.jipipe.plugins.expressions.functions.variables

org.hkijena.jipipe.plugins.expressions.functions.vector - package org.hkijena.jipipe.plugins.expressions.functions.vector

org.hkijena.jipipe.plugins.expressions.operators - package org.hkijena.jipipe.plugins.expressions.operators

org.hkijena.jipipe.plugins.expressions.ui - package org.hkijena.jipipe.plugins.expressions.ui

org.hkijena.jipipe.plugins.expressions.variables - package org.hkijena.jipipe.plugins.expressions.variables

org.hkijena.jipipe.plugins.filesystem - package org.hkijena.jipipe.plugins.filesystem

org.hkijena.jipipe.plugins.filesystem.algorithms.local - package org.hkijena.jipipe.plugins.filesystem.algorithms.local

org.hkijena.jipipe.plugins.filesystem.algorithms.zarr - package org.hkijena.jipipe.plugins.filesystem.algorithms.zarr

org.hkijena.jipipe.plugins.filesystem.compat - package org.hkijena.jipipe.plugins.filesystem.compat

org.hkijena.jipipe.plugins.filesystem.datasources - package org.hkijena.jipipe.plugins.filesystem.datasources

org.hkijena.jipipe.plugins.filesystem.dataypes - package org.hkijena.jipipe.plugins.filesystem.dataypes

org.hkijena.jipipe.plugins.filesystem.desktop - package org.hkijena.jipipe.plugins.filesystem.desktop

org.hkijena.jipipe.plugins.filesystem.resultanalysis - package org.hkijena.jipipe.plugins.filesystem.resultanalysis

org.hkijena.jipipe.plugins.forms - package org.hkijena.jipipe.plugins.forms

org.hkijena.jipipe.plugins.forms.algorithms - package org.hkijena.jipipe.plugins.forms.algorithms

org.hkijena.jipipe.plugins.forms.algorithms.generators - package org.hkijena.jipipe.plugins.forms.algorithms.generators

org.hkijena.jipipe.plugins.forms.datatypes - package org.hkijena.jipipe.plugins.forms.datatypes

org.hkijena.jipipe.plugins.forms.ui - package org.hkijena.jipipe.plugins.forms.ui

org.hkijena.jipipe.plugins.forms.utils - package org.hkijena.jipipe.plugins.forms.utils

org.hkijena.jipipe.plugins.graphannotation - package org.hkijena.jipipe.plugins.graphannotation

org.hkijena.jipipe.plugins.graphannotation.nodes - package org.hkijena.jipipe.plugins.graphannotation.nodes

org.hkijena.jipipe.plugins.graphannotation.tools - package org.hkijena.jipipe.plugins.graphannotation.tools

org.hkijena.jipipe.plugins.ij3d - package org.hkijena.jipipe.plugins.ij3d

org.hkijena.jipipe.plugins.ij3d.compat - package org.hkijena.jipipe.plugins.ij3d.compat

org.hkijena.jipipe.plugins.ij3d.datatypes - package org.hkijena.jipipe.plugins.ij3d.datatypes

org.hkijena.jipipe.plugins.ij3d.display - package org.hkijena.jipipe.plugins.ij3d.display

org.hkijena.jipipe.plugins.ij3d.imageviewer - package org.hkijena.jipipe.plugins.ij3d.imageviewer

org.hkijena.jipipe.plugins.ij3d.nodes - package org.hkijena.jipipe.plugins.ij3d.nodes

org.hkijena.jipipe.plugins.ij3d.nodes.binary - package org.hkijena.jipipe.plugins.ij3d.nodes.binary

org.hkijena.jipipe.plugins.ij3d.nodes.features - package org.hkijena.jipipe.plugins.ij3d.nodes.features

org.hkijena.jipipe.plugins.ij3d.nodes.filters - package org.hkijena.jipipe.plugins.ij3d.nodes.filters

org.hkijena.jipipe.plugins.ij3d.nodes.overlay - package org.hkijena.jipipe.plugins.ij3d.nodes.overlay

org.hkijena.jipipe.plugins.ij3d.nodes.roi3d - package org.hkijena.jipipe.plugins.ij3d.nodes.roi3d

org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert - package org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert

org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter - package org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter

org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate - package org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate

org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure - package org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure

org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.merge - package org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.merge

org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata - package org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata

org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify - package org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify

org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process - package org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process

org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split - package org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split

org.hkijena.jipipe.plugins.ij3d.nodes.segmentation - package org.hkijena.jipipe.plugins.ij3d.nodes.segmentation

org.hkijena.jipipe.plugins.ij3d.utils - package org.hkijena.jipipe.plugins.ij3d.utils

org.hkijena.jipipe.plugins.ij3d.viewers - package org.hkijena.jipipe.plugins.ij3d.viewers

org.hkijena.jipipe.plugins.ijfilaments - package org.hkijena.jipipe.plugins.ijfilaments

org.hkijena.jipipe.plugins.ijfilaments.datatypes - package org.hkijena.jipipe.plugins.ijfilaments.datatypes

org.hkijena.jipipe.plugins.ijfilaments.display - package org.hkijena.jipipe.plugins.ijfilaments.display

org.hkijena.jipipe.plugins.ijfilaments.environments - package org.hkijena.jipipe.plugins.ijfilaments.environments

org.hkijena.jipipe.plugins.ijfilaments.nodes.convert - package org.hkijena.jipipe.plugins.ijfilaments.nodes.convert

org.hkijena.jipipe.plugins.ijfilaments.nodes.filter - package org.hkijena.jipipe.plugins.ijfilaments.nodes.filter

org.hkijena.jipipe.plugins.ijfilaments.nodes.generate - package org.hkijena.jipipe.plugins.ijfilaments.nodes.generate

org.hkijena.jipipe.plugins.ijfilaments.nodes.measure - package org.hkijena.jipipe.plugins.ijfilaments.nodes.measure

org.hkijena.jipipe.plugins.ijfilaments.nodes.merge - package org.hkijena.jipipe.plugins.ijfilaments.nodes.merge

org.hkijena.jipipe.plugins.ijfilaments.nodes.modify - package org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

org.hkijena.jipipe.plugins.ijfilaments.nodes.overlay - package org.hkijena.jipipe.plugins.ijfilaments.nodes.overlay

org.hkijena.jipipe.plugins.ijfilaments.nodes.process - package org.hkijena.jipipe.plugins.ijfilaments.nodes.process

org.hkijena.jipipe.plugins.ijfilaments.nodes.split - package org.hkijena.jipipe.plugins.ijfilaments.nodes.split

org.hkijena.jipipe.plugins.ijfilaments.nodes.utils - package org.hkijena.jipipe.plugins.ijfilaments.nodes.utils

org.hkijena.jipipe.plugins.ijfilaments.parameters - package org.hkijena.jipipe.plugins.ijfilaments.parameters

org.hkijena.jipipe.plugins.ijfilaments.settings - package org.hkijena.jipipe.plugins.ijfilaments.settings

org.hkijena.jipipe.plugins.ijfilaments.util - package org.hkijena.jipipe.plugins.ijfilaments.util

org.hkijena.jipipe.plugins.ijfilaments.viewers - package org.hkijena.jipipe.plugins.ijfilaments.viewers

org.hkijena.jipipe.plugins.ijmultitemplatematching - package org.hkijena.jipipe.plugins.ijmultitemplatematching

org.hkijena.jipipe.plugins.ijocr - package org.hkijena.jipipe.plugins.ijocr

org.hkijena.jipipe.plugins.ijocr.environments - package org.hkijena.jipipe.plugins.ijocr.environments

org.hkijena.jipipe.plugins.ijocr.nodes - package org.hkijena.jipipe.plugins.ijocr.nodes

org.hkijena.jipipe.plugins.ijocr.settings - package org.hkijena.jipipe.plugins.ijocr.settings

org.hkijena.jipipe.plugins.ijocr.utils - package org.hkijena.jipipe.plugins.ijocr.utils

org.hkijena.jipipe.plugins.ijtrackmate - package org.hkijena.jipipe.plugins.ijtrackmate

org.hkijena.jipipe.plugins.ijtrackmate.datatypes - package org.hkijena.jipipe.plugins.ijtrackmate.datatypes

org.hkijena.jipipe.plugins.ijtrackmate.display.algorithms - package org.hkijena.jipipe.plugins.ijtrackmate.display.algorithms

org.hkijena.jipipe.plugins.ijtrackmate.display.spots - package org.hkijena.jipipe.plugins.ijtrackmate.display.spots

org.hkijena.jipipe.plugins.ijtrackmate.display.tracks - package org.hkijena.jipipe.plugins.ijtrackmate.display.tracks

org.hkijena.jipipe.plugins.ijtrackmate.display.trackscheme - package org.hkijena.jipipe.plugins.ijtrackmate.display.trackscheme

org.hkijena.jipipe.plugins.ijtrackmate.io - package org.hkijena.jipipe.plugins.ijtrackmate.io

org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters - package org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters

org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors - package org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors

org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots - package org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots

org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks - package org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks

org.hkijena.jipipe.plugins.ijtrackmate.parameters - package org.hkijena.jipipe.plugins.ijtrackmate.parameters

org.hkijena.jipipe.plugins.ijtrackmate.settings - package org.hkijena.jipipe.plugins.ijtrackmate.settings

org.hkijena.jipipe.plugins.ijtrackmate.utils - package org.hkijena.jipipe.plugins.ijtrackmate.utils

org.hkijena.jipipe.plugins.ijtrackmate.viewers - package org.hkijena.jipipe.plugins.ijtrackmate.viewers

org.hkijena.jipipe.plugins.ijweka - package org.hkijena.jipipe.plugins.ijweka

org.hkijena.jipipe.plugins.ijweka.datatypes - package org.hkijena.jipipe.plugins.ijweka.datatypes

org.hkijena.jipipe.plugins.ijweka.nodes - package org.hkijena.jipipe.plugins.ijweka.nodes

org.hkijena.jipipe.plugins.ijweka.parameters - package org.hkijena.jipipe.plugins.ijweka.parameters

org.hkijena.jipipe.plugins.ijweka.parameters.collections - package org.hkijena.jipipe.plugins.ijweka.parameters.collections

org.hkijena.jipipe.plugins.ijweka.parameters.features - package org.hkijena.jipipe.plugins.ijweka.parameters.features

org.hkijena.jipipe.plugins.ilastik - package org.hkijena.jipipe.plugins.ilastik

org.hkijena.jipipe.plugins.ilastik.datatypes - package org.hkijena.jipipe.plugins.ilastik.datatypes

org.hkijena.jipipe.plugins.ilastik.environments - package org.hkijena.jipipe.plugins.ilastik.environments

org.hkijena.jipipe.plugins.ilastik.nodes - package org.hkijena.jipipe.plugins.ilastik.nodes

org.hkijena.jipipe.plugins.ilastik.parameters - package org.hkijena.jipipe.plugins.ilastik.parameters

org.hkijena.jipipe.plugins.ilastik.settings - package org.hkijena.jipipe.plugins.ilastik.settings

org.hkijena.jipipe.plugins.ilastik.utils - package org.hkijena.jipipe.plugins.ilastik.utils

org.hkijena.jipipe.plugins.ilastik.utils.hdf5 - package org.hkijena.jipipe.plugins.ilastik.utils.hdf5

org.hkijena.jipipe.plugins.imagej2 - package org.hkijena.jipipe.plugins.imagej2

org.hkijena.jipipe.plugins.imagej2.algorithms - package org.hkijena.jipipe.plugins.imagej2.algorithms

org.hkijena.jipipe.plugins.imagej2.compat - package org.hkijena.jipipe.plugins.imagej2.compat

org.hkijena.jipipe.plugins.imagej2.converters - package org.hkijena.jipipe.plugins.imagej2.converters

org.hkijena.jipipe.plugins.imagej2.datatypes - package org.hkijena.jipipe.plugins.imagej2.datatypes

org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds - package org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds

org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant - package org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant

org.hkijena.jipipe.plugins.imagej2.datatypes.shapes - package org.hkijena.jipipe.plugins.imagej2.datatypes.shapes

org.hkijena.jipipe.plugins.imagej2.io - package org.hkijena.jipipe.plugins.imagej2.io

org.hkijena.jipipe.plugins.imagej2.io.data - package org.hkijena.jipipe.plugins.imagej2.io.data

org.hkijena.jipipe.plugins.imagej2.io.data.input - package org.hkijena.jipipe.plugins.imagej2.io.data.input

org.hkijena.jipipe.plugins.imagej2.io.data.output - package org.hkijena.jipipe.plugins.imagej2.io.data.output

org.hkijena.jipipe.plugins.imagej2.io.parameters - package org.hkijena.jipipe.plugins.imagej2.io.parameters

org.hkijena.jipipe.plugins.imagej2.io.parameters.input - package org.hkijena.jipipe.plugins.imagej2.io.parameters.input

org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays - package org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays

org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives - package org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives

org.hkijena.jipipe.plugins.imagej2.io.parameters.output - package org.hkijena.jipipe.plugins.imagej2.io.parameters.output

org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives - package org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives

org.hkijena.jipipe.plugins.imagej2.viewers - package org.hkijena.jipipe.plugins.imagej2.viewers

org.hkijena.jipipe.plugins.imagejalgorithms - package org.hkijena.jipipe.plugins.imagejalgorithms

org.hkijena.jipipe.plugins.imagejalgorithms.nodes - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.bunwarpj - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.bunwarpj

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.register - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.register

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.sharpen - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.sharpen

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local

org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform - package org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

org.hkijena.jipipe.plugins.imagejalgorithms.parameters - package org.hkijena.jipipe.plugins.imagejalgorithms.parameters

org.hkijena.jipipe.plugins.imagejalgorithms.utils - package org.hkijena.jipipe.plugins.imagejalgorithms.utils

org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg - package org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg

org.hkijena.jipipe.plugins.imagejdatatypes - package org.hkijena.jipipe.plugins.imagejdatatypes

org.hkijena.jipipe.plugins.imagejdatatypes.algorithms - package org.hkijena.jipipe.plugins.imagejdatatypes.algorithms

org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate - package org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate

org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color - package org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color

org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io - package org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io

org.hkijena.jipipe.plugins.imagejdatatypes.colorspace - package org.hkijena.jipipe.plugins.imagejdatatypes.colorspace

org.hkijena.jipipe.plugins.imagejdatatypes.compat - package org.hkijena.jipipe.plugins.imagejdatatypes.compat

org.hkijena.jipipe.plugins.imagejdatatypes.converters - package org.hkijena.jipipe.plugins.imagejdatatypes.converters

org.hkijena.jipipe.plugins.imagejdatatypes.datatypes - package org.hkijena.jipipe.plugins.imagejdatatypes.datatypes

org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color - package org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color

org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2 - package org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2

org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color - package org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color

org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale - package org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.greyscale

org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3 - package org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3

org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color - package org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color

org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale - package org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.greyscale

org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4 - package org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4

org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color - package org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color

org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale - package org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.greyscale

org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5 - package org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5

org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color - package org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color

org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale - package org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.greyscale

org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft - package org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft

org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale - package org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.greyscale

org.hkijena.jipipe.plugins.imagejdatatypes.display - package org.hkijena.jipipe.plugins.imagejdatatypes.display

org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers - package org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers

org.hkijena.jipipe.plugins.imagejdatatypes.filters - package org.hkijena.jipipe.plugins.imagejdatatypes.filters

org.hkijena.jipipe.plugins.imagejdatatypes.parameters - package org.hkijena.jipipe.plugins.imagejdatatypes.parameters

org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis - package org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis

org.hkijena.jipipe.plugins.imagejdatatypes.settings - package org.hkijena.jipipe.plugins.imagejdatatypes.settings

org.hkijena.jipipe.plugins.imagejdatatypes.tools - package org.hkijena.jipipe.plugins.imagejdatatypes.tools

org.hkijena.jipipe.plugins.imagejdatatypes.util - package org.hkijena.jipipe.plugins.imagejdatatypes.util

org.hkijena.jipipe.plugins.imagejdatatypes.util.measure - package org.hkijena.jipipe.plugins.imagejdatatypes.util.measure

org.hkijena.jipipe.plugins.imageviewer.legacy - package org.hkijena.jipipe.plugins.imageviewer.legacy

org.hkijena.jipipe.plugins.imageviewer.legacy.api - package org.hkijena.jipipe.plugins.imageviewer.legacy.api

org.hkijena.jipipe.plugins.imageviewer.legacy.impl - package org.hkijena.jipipe.plugins.imageviewer.legacy.impl

org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d - package org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d

org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer - package org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer

org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager - package org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager

org.hkijena.jipipe.plugins.imageviewer.legacy.runs - package org.hkijena.jipipe.plugins.imageviewer.legacy.runs

org.hkijena.jipipe.plugins.imageviewer.settings - package org.hkijena.jipipe.plugins.imageviewer.settings

org.hkijena.jipipe.plugins.imageviewer.utils - package org.hkijena.jipipe.plugins.imageviewer.utils

org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d - package org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d

org.hkijena.jipipe.plugins.imp - package org.hkijena.jipipe.plugins.imp

org.hkijena.jipipe.plugins.imp.datatypes - package org.hkijena.jipipe.plugins.imp.datatypes

org.hkijena.jipipe.plugins.imp.nodes - package org.hkijena.jipipe.plugins.imp.nodes

org.hkijena.jipipe.plugins.imp.utils - package org.hkijena.jipipe.plugins.imp.utils

org.hkijena.jipipe.plugins.imp.viewers - package org.hkijena.jipipe.plugins.imp.viewers

org.hkijena.jipipe.plugins.jsonextensionloader - package org.hkijena.jipipe.plugins.jsonextensionloader

org.hkijena.jipipe.plugins.multiparameters - package org.hkijena.jipipe.plugins.multiparameters

org.hkijena.jipipe.plugins.multiparameters.converters - package org.hkijena.jipipe.plugins.multiparameters.converters

org.hkijena.jipipe.plugins.multiparameters.datatypes - package org.hkijena.jipipe.plugins.multiparameters.datatypes

org.hkijena.jipipe.plugins.multiparameters.nodes - package org.hkijena.jipipe.plugins.multiparameters.nodes

org.hkijena.jipipe.plugins.napari - package org.hkijena.jipipe.plugins.napari

org.hkijena.jipipe.plugins.nodeexamples - package org.hkijena.jipipe.plugins.nodeexamples

org.hkijena.jipipe.plugins.nodetemplate - package org.hkijena.jipipe.plugins.nodetemplate

org.hkijena.jipipe.plugins.nodetemplate.templatedownloader - package org.hkijena.jipipe.plugins.nodetemplate.templatedownloader

org.hkijena.jipipe.plugins.omero - package org.hkijena.jipipe.plugins.omero

org.hkijena.jipipe.plugins.omero.datatypes - package org.hkijena.jipipe.plugins.omero.datatypes

org.hkijena.jipipe.plugins.omero.nodes.annotate - package org.hkijena.jipipe.plugins.omero.nodes.annotate

org.hkijena.jipipe.plugins.omero.nodes.datasources - package org.hkijena.jipipe.plugins.omero.nodes.datasources

org.hkijena.jipipe.plugins.omero.nodes.download - package org.hkijena.jipipe.plugins.omero.nodes.download

org.hkijena.jipipe.plugins.omero.nodes.manage - package org.hkijena.jipipe.plugins.omero.nodes.manage

org.hkijena.jipipe.plugins.omero.nodes.navigate - package org.hkijena.jipipe.plugins.omero.nodes.navigate

org.hkijena.jipipe.plugins.omero.nodes.upload - package org.hkijena.jipipe.plugins.omero.nodes.upload

org.hkijena.jipipe.plugins.omero.parameters - package org.hkijena.jipipe.plugins.omero.parameters

org.hkijena.jipipe.plugins.omero.util - package org.hkijena.jipipe.plugins.omero.util

org.hkijena.jipipe.plugins.omero.viewers - package org.hkijena.jipipe.plugins.omero.viewers

org.hkijena.jipipe.plugins.omnipose - package org.hkijena.jipipe.plugins.omnipose

org.hkijena.jipipe.plugins.omnipose.algorithms - package org.hkijena.jipipe.plugins.omnipose.algorithms

org.hkijena.jipipe.plugins.omnipose.legacy.algorithms - package org.hkijena.jipipe.plugins.omnipose.legacy.algorithms

org.hkijena.jipipe.plugins.omnipose.legacy.parameters - package org.hkijena.jipipe.plugins.omnipose.legacy.parameters

org.hkijena.jipipe.plugins.omnipose.parameters - package org.hkijena.jipipe.plugins.omnipose.parameters

org.hkijena.jipipe.plugins.opencv - package org.hkijena.jipipe.plugins.opencv

org.hkijena.jipipe.plugins.opencv.datatypes - package org.hkijena.jipipe.plugins.opencv.datatypes

org.hkijena.jipipe.plugins.opencv.nodes - package org.hkijena.jipipe.plugins.opencv.nodes

org.hkijena.jipipe.plugins.opencv.nodes.filters - package org.hkijena.jipipe.plugins.opencv.nodes.filters

org.hkijena.jipipe.plugins.opencv.nodes.generators - package org.hkijena.jipipe.plugins.opencv.nodes.generators

org.hkijena.jipipe.plugins.opencv.utils - package org.hkijena.jipipe.plugins.opencv.utils

org.hkijena.jipipe.plugins.opencv.viewers - package org.hkijena.jipipe.plugins.opencv.viewers

org.hkijena.jipipe.plugins.parameters - package org.hkijena.jipipe.plugins.parameters

org.hkijena.jipipe.plugins.parameters.api.collections - package org.hkijena.jipipe.plugins.parameters.api.collections

org.hkijena.jipipe.plugins.parameters.api.enums - package org.hkijena.jipipe.plugins.parameters.api.enums

org.hkijena.jipipe.plugins.parameters.api.functions - package org.hkijena.jipipe.plugins.parameters.api.functions

org.hkijena.jipipe.plugins.parameters.api.graph - package org.hkijena.jipipe.plugins.parameters.api.graph

org.hkijena.jipipe.plugins.parameters.api.matrix - package org.hkijena.jipipe.plugins.parameters.api.matrix

org.hkijena.jipipe.plugins.parameters.api.optional - package org.hkijena.jipipe.plugins.parameters.api.optional

org.hkijena.jipipe.plugins.parameters.api.pairs - package org.hkijena.jipipe.plugins.parameters.api.pairs

org.hkijena.jipipe.plugins.parameters.api.scripts - package org.hkijena.jipipe.plugins.parameters.api.scripts

org.hkijena.jipipe.plugins.parameters.library.auth - package org.hkijena.jipipe.plugins.parameters.library.auth

org.hkijena.jipipe.plugins.parameters.library.collections - package org.hkijena.jipipe.plugins.parameters.library.collections

org.hkijena.jipipe.plugins.parameters.library.colors - package org.hkijena.jipipe.plugins.parameters.library.colors

org.hkijena.jipipe.plugins.parameters.library.editors - package org.hkijena.jipipe.plugins.parameters.library.editors

org.hkijena.jipipe.plugins.parameters.library.filesystem - package org.hkijena.jipipe.plugins.parameters.library.filesystem

org.hkijena.jipipe.plugins.parameters.library.graph - package org.hkijena.jipipe.plugins.parameters.library.graph

org.hkijena.jipipe.plugins.parameters.library.images - package org.hkijena.jipipe.plugins.parameters.library.images

org.hkijena.jipipe.plugins.parameters.library.jipipe - package org.hkijena.jipipe.plugins.parameters.library.jipipe

org.hkijena.jipipe.plugins.parameters.library.markup - package org.hkijena.jipipe.plugins.parameters.library.markup

org.hkijena.jipipe.plugins.parameters.library.matrix - package org.hkijena.jipipe.plugins.parameters.library.matrix

org.hkijena.jipipe.plugins.parameters.library.pairs - package org.hkijena.jipipe.plugins.parameters.library.pairs

org.hkijena.jipipe.plugins.parameters.library.patterns - package org.hkijena.jipipe.plugins.parameters.library.patterns

org.hkijena.jipipe.plugins.parameters.library.primitives - package org.hkijena.jipipe.plugins.parameters.library.primitives

org.hkijena.jipipe.plugins.parameters.library.primitives.list - package org.hkijena.jipipe.plugins.parameters.library.primitives.list

org.hkijena.jipipe.plugins.parameters.library.primitives.optional - package org.hkijena.jipipe.plugins.parameters.library.primitives.optional

org.hkijena.jipipe.plugins.parameters.library.primitives.ranges - package org.hkijena.jipipe.plugins.parameters.library.primitives.ranges

org.hkijena.jipipe.plugins.parameters.library.primitives.vectors - package org.hkijena.jipipe.plugins.parameters.library.primitives.vectors

org.hkijena.jipipe.plugins.parameters.library.quantities - package org.hkijena.jipipe.plugins.parameters.library.quantities

org.hkijena.jipipe.plugins.parameters.library.ranges - package org.hkijena.jipipe.plugins.parameters.library.ranges

org.hkijena.jipipe.plugins.parameters.library.references - package org.hkijena.jipipe.plugins.parameters.library.references

org.hkijena.jipipe.plugins.parameters.library.roi - package org.hkijena.jipipe.plugins.parameters.library.roi

org.hkijena.jipipe.plugins.parameters.library.scripts - package org.hkijena.jipipe.plugins.parameters.library.scripts

org.hkijena.jipipe.plugins.parameters.library.table - package org.hkijena.jipipe.plugins.parameters.library.table

org.hkijena.jipipe.plugins.parameters.library.util - package org.hkijena.jipipe.plugins.parameters.library.util

org.hkijena.jipipe.plugins.pipelinerender - package org.hkijena.jipipe.plugins.pipelinerender

org.hkijena.jipipe.plugins.plots - package org.hkijena.jipipe.plugins.plots

org.hkijena.jipipe.plugins.plots.converters - package org.hkijena.jipipe.plugins.plots.converters

org.hkijena.jipipe.plugins.plots.datatypes - package org.hkijena.jipipe.plugins.plots.datatypes

org.hkijena.jipipe.plugins.plots.nodes - package org.hkijena.jipipe.plugins.plots.nodes

org.hkijena.jipipe.plugins.plots.parameters - package org.hkijena.jipipe.plugins.plots.parameters

org.hkijena.jipipe.plugins.plots.ui.resultanalysis - package org.hkijena.jipipe.plugins.plots.ui.resultanalysis

org.hkijena.jipipe.plugins.plots.utils - package org.hkijena.jipipe.plugins.plots.utils

org.hkijena.jipipe.plugins.plots.viewers - package org.hkijena.jipipe.plugins.plots.viewers

org.hkijena.jipipe.plugins.processes - package org.hkijena.jipipe.plugins.processes

org.hkijena.jipipe.plugins.python - package org.hkijena.jipipe.plugins.python

org.hkijena.jipipe.plugins.python.adapter - package org.hkijena.jipipe.plugins.python.adapter

org.hkijena.jipipe.plugins.python.algorithms.jython - package org.hkijena.jipipe.plugins.python.algorithms.jython

org.hkijena.jipipe.plugins.python.algorithms.python - package org.hkijena.jipipe.plugins.python.algorithms.python

org.hkijena.jipipe.plugins.python.installers - package org.hkijena.jipipe.plugins.python.installers

org.hkijena.jipipe.plugins.r - package org.hkijena.jipipe.plugins.r

org.hkijena.jipipe.plugins.r.algorithms - package org.hkijena.jipipe.plugins.r.algorithms

org.hkijena.jipipe.plugins.r.parameters - package org.hkijena.jipipe.plugins.r.parameters

org.hkijena.jipipe.plugins.r.ui - package org.hkijena.jipipe.plugins.r.ui

org.hkijena.jipipe.plugins.scene3d - package org.hkijena.jipipe.plugins.scene3d

org.hkijena.jipipe.plugins.scene3d.datatypes - package org.hkijena.jipipe.plugins.scene3d.datatypes

org.hkijena.jipipe.plugins.scene3d.model - package org.hkijena.jipipe.plugins.scene3d.model

org.hkijena.jipipe.plugins.scene3d.model.geometries - package org.hkijena.jipipe.plugins.scene3d.model.geometries

org.hkijena.jipipe.plugins.scene3d.nodes - package org.hkijena.jipipe.plugins.scene3d.nodes

org.hkijena.jipipe.plugins.scene3d.utils - package org.hkijena.jipipe.plugins.scene3d.utils

org.hkijena.jipipe.plugins.settings - package org.hkijena.jipipe.plugins.settings

org.hkijena.jipipe.plugins.strings - package org.hkijena.jipipe.plugins.strings

org.hkijena.jipipe.plugins.strings.datasources - package org.hkijena.jipipe.plugins.strings.datasources

org.hkijena.jipipe.plugins.strings.nodes.json - package org.hkijena.jipipe.plugins.strings.nodes.json

org.hkijena.jipipe.plugins.strings.nodes.text - package org.hkijena.jipipe.plugins.strings.nodes.text

org.hkijena.jipipe.plugins.strings.nodes.xml - package org.hkijena.jipipe.plugins.strings.nodes.xml

org.hkijena.jipipe.plugins.tables - package org.hkijena.jipipe.plugins.tables

org.hkijena.jipipe.plugins.tables.compat - package org.hkijena.jipipe.plugins.tables.compat

org.hkijena.jipipe.plugins.tables.datatypes - package org.hkijena.jipipe.plugins.tables.datatypes

org.hkijena.jipipe.plugins.tables.display - package org.hkijena.jipipe.plugins.tables.display

org.hkijena.jipipe.plugins.tables.nodes - package org.hkijena.jipipe.plugins.tables.nodes

org.hkijena.jipipe.plugins.tables.nodes.annotations - package org.hkijena.jipipe.plugins.tables.nodes.annotations

org.hkijena.jipipe.plugins.tables.nodes.columns - package org.hkijena.jipipe.plugins.tables.nodes.columns

org.hkijena.jipipe.plugins.tables.nodes.filter - package org.hkijena.jipipe.plugins.tables.nodes.filter

org.hkijena.jipipe.plugins.tables.nodes.merge - package org.hkijena.jipipe.plugins.tables.nodes.merge

org.hkijena.jipipe.plugins.tables.nodes.rows - package org.hkijena.jipipe.plugins.tables.nodes.rows

org.hkijena.jipipe.plugins.tables.nodes.split - package org.hkijena.jipipe.plugins.tables.nodes.split

org.hkijena.jipipe.plugins.tables.nodes.statistics - package org.hkijena.jipipe.plugins.tables.nodes.statistics

org.hkijena.jipipe.plugins.tables.nodes.transform - package org.hkijena.jipipe.plugins.tables.nodes.transform

org.hkijena.jipipe.plugins.tables.operations.converting - package org.hkijena.jipipe.plugins.tables.operations.converting

org.hkijena.jipipe.plugins.tables.operations.integrating - package org.hkijena.jipipe.plugins.tables.operations.integrating

org.hkijena.jipipe.plugins.tables.parameters - package org.hkijena.jipipe.plugins.tables.parameters

org.hkijena.jipipe.plugins.tables.parameters.collections - package org.hkijena.jipipe.plugins.tables.parameters.collections

org.hkijena.jipipe.plugins.tables.parameters.enums - package org.hkijena.jipipe.plugins.tables.parameters.enums

org.hkijena.jipipe.plugins.tables.parameters.processors - package org.hkijena.jipipe.plugins.tables.parameters.processors

org.hkijena.jipipe.plugins.tools - package org.hkijena.jipipe.plugins.tools

org.hkijena.jipipe.plugins.utils - package org.hkijena.jipipe.plugins.utils

org.hkijena.jipipe.plugins.utils.algorithms - package org.hkijena.jipipe.plugins.utils.algorithms

org.hkijena.jipipe.plugins.utils.algorithms.datatable - package org.hkijena.jipipe.plugins.utils.algorithms.datatable

org.hkijena.jipipe.plugins.utils.algorithms.distribute - package org.hkijena.jipipe.plugins.utils.algorithms.distribute

org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps - package org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps

org.hkijena.jipipe.plugins.utils.algorithms.meta - package org.hkijena.jipipe.plugins.utils.algorithms.meta

org.hkijena.jipipe.plugins.utils.algorithms.processes - package org.hkijena.jipipe.plugins.utils.algorithms.processes

org.hkijena.jipipe.plugins.utils.contextmenu - package org.hkijena.jipipe.plugins.utils.contextmenu

org.hkijena.jipipe.plugins.utils.datatypes - package org.hkijena.jipipe.plugins.utils.datatypes

org.hkijena.jipipe.plugins.utils.display - package org.hkijena.jipipe.plugins.utils.display

org.hkijena.jipipe.utils - package org.hkijena.jipipe.utils

org.hkijena.jipipe.utils.classfilters - package org.hkijena.jipipe.utils.classfilters

org.hkijena.jipipe.utils.data - package org.hkijena.jipipe.utils.data

org.hkijena.jipipe.utils.debounce - package org.hkijena.jipipe.utils.debounce

org.hkijena.jipipe.utils.json - package org.hkijena.jipipe.utils.json

org.hkijena.jipipe.utils.scripting - package org.hkijena.jipipe.utils.scripting

org.hkijena.jipipe.utils.search - package org.hkijena.jipipe.utils.search

org.hkijena.jipipe.utils.ui - package org.hkijena.jipipe.utils.ui

org.hkijena.jipipe.utils.ui.events - package org.hkijena.jipipe.utils.ui.events

org.hkijena.jipipe.utils.xml - package org.hkijena.jipipe.utils.xml

OrientationFeatures2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

OrientationFeatures2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm

OrientationFeatures2DAlgorithm(OrientationFeatures2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm

OrientationFeatures2DAlgorithm.OutputParameters - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

OrientationJGradientOperator - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.utils

OrientationJLogWrapper - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

OrientationJLogWrapper(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJLogWrapper

OrientationJStructureTensorParameters - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

OrientationJStructureTensorParameters() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJStructureTensorParameters

OrientationJStructureTensorParameters(OrientationJStructureTensorParameters) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJStructureTensorParameters

OrientationJVectorFieldType - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.utils

OrientationVectorField2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze

OrientationVectorField2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm

OrientationVectorField2DAlgorithm(OrientationVectorField2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm

OrientationVectorField2DAlgorithm.OutputParameters - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze

Otsu(ImageProcessor, int, int, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm

outline(ROI3DOutline, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

outline(RoiOutline) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Outlines all Roi in this list by the specified algorithm.

OutlineRoi3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process

Wrapper around RoiManager

OutlineRoi3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process.OutlineRoi3DAlgorithm

Instantiates a new node type.

OutlineRoi3DAlgorithm(OutlineRoi3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process.OutlineRoi3DAlgorithm

Instantiates a new node type.

OutlineRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Wrapper around RoiManager

OutlineRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.OutlineRoiAlgorithm

Instantiates a new node type.

OutlineRoiAlgorithm(OutlineRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.OutlineRoiAlgorithm

Instantiates a new node type.

OutlineRoiConcaveHullMoreiraSantosAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

OutlineRoiConcaveHullMoreiraSantosAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.OutlineRoiConcaveHullMoreiraSantosAlgorithm

OutlineRoiConcaveHullMoreiraSantosAlgorithm(OutlineRoiConcaveHullMoreiraSantosAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.OutlineRoiConcaveHullMoreiraSantosAlgorithm

OutOfBoundsFactoryImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.data.input

Handling of OutOfBoundsFactory

OutOfBoundsFactoryImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.data.input.OutOfBoundsFactoryImageJ2ModuleInput

OUTPUT_COHERENCE - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm

OUTPUT_COHERENCE - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm

OUTPUT_COHERENCY - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

OUTPUT_ENERGY - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm

OUTPUT_ENERGY - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

OUTPUT_ENERGY - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm

OUTPUT_FLOWS_D - Static variable in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

OUTPUT_FLOWS_D - Static variable in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

OUTPUT_FLOWS_D - Static variable in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

OUTPUT_FLOWS_D - Static variable in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

OUTPUT_FLOWS_D - Static variable in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

OUTPUT_FLOWS_XY - Static variable in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

OUTPUT_FLOWS_XY - Static variable in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

OUTPUT_FLOWS_XY - Static variable in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

OUTPUT_FLOWS_XY - Static variable in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

OUTPUT_FLOWS_XY - Static variable in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

OUTPUT_FLOWS_Z - Static variable in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

OUTPUT_FLOWS_Z - Static variable in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

OUTPUT_FLOWS_Z - Static variable in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

OUTPUT_FLOWS_Z - Static variable in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

OUTPUT_FLOWS_Z - Static variable in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

OUTPUT_GRADIENT_X - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm

OUTPUT_GRADIENT_Y - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm

OUTPUT_HARRIS_INDEX - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

OUTPUT_LABELS - Static variable in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

OUTPUT_LABELS - Static variable in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

OUTPUT_LABELS - Static variable in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

OUTPUT_LABELS - Static variable in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

OUTPUT_LABELS - Static variable in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

OUTPUT_ORIENTATION - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm

OUTPUT_ORIENTATION - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

OUTPUT_ORIENTATION - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm

OUTPUT_PROBABILITIES - Static variable in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

OUTPUT_PROBABILITIES - Static variable in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

OUTPUT_PROBABILITIES - Static variable in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

OUTPUT_PROBABILITIES - Static variable in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

OUTPUT_PROBABILITIES - Static variable in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

OUTPUT_ROI - Static variable in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

OUTPUT_ROI - Static variable in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

OUTPUT_ROI - Static variable in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

OUTPUT_ROI - Static variable in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

OUTPUT_ROI - Static variable in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

OUTPUT_SIZE_MODEL - Static variable in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

OUTPUT_SIZE_MODEL - Static variable in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

OUTPUT_SIZE_MODEL - Static variable in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

OUTPUT_SIZE_MODEL - Static variable in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

OUTPUT_SIZE_MODEL - Static variable in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

OUTPUT_SIZE_MODEL - Static variable in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

OUTPUT_SLOT_BLOCKWISE_OBJECT_PREDICTIONS - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

OUTPUT_SLOT_BLOCKWISE_OBJECT_PREDICTIONS - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

OUTPUT_SLOT_BLOCKWISE_OBJECT_PREDICTIONS - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

OUTPUT_SLOT_BLOCKWISE_OBJECT_PROBABILITIES - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

OUTPUT_SLOT_BLOCKWISE_OBJECT_PROBABILITIES - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

OUTPUT_SLOT_BLOCKWISE_OBJECT_PROBABILITIES - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

OUTPUT_SLOT_FEATURES - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

OUTPUT_SLOT_FEATURES - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

OUTPUT_SLOT_FEATURES - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

OUTPUT_SLOT_FEATURES - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

OUTPUT_SLOT_FEATURES_STAGE_1 - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

OUTPUT_SLOT_FEATURES_STAGE_2 - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

OUTPUT_SLOT_INPUT_STAGE_1 - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

OUTPUT_SLOT_INPUT_STAGE_2 - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

OUTPUT_SLOT_LABELS - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

OUTPUT_SLOT_LABELS_STAGE_1 - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

OUTPUT_SLOT_LABELS_STAGE_2 - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

OUTPUT_SLOT_MATCHED_TEMPLATES - Static variable in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

OUTPUT_SLOT_OBJECT_PREDICTIONS - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

OUTPUT_SLOT_OBJECT_PREDICTIONS - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

OUTPUT_SLOT_OBJECT_PREDICTIONS - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

OUTPUT_SLOT_OBJECT_PROBABILITIES - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

OUTPUT_SLOT_OBJECT_PROBABILITIES - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

OUTPUT_SLOT_OBJECT_PROBABILITIES - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

OUTPUT_SLOT_PIXEL_PROBABILITIES - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

OUTPUT_SLOT_PIXEL_PROBABILITIES - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

OUTPUT_SLOT_PIXEL_PROBABILITIES - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

OUTPUT_SLOT_PROBABILITIES - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

OUTPUT_SLOT_PROBABILITIES_ALL_STAGES - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

OUTPUT_SLOT_PROBABILITIES_STAGE_1 - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

OUTPUT_SLOT_PROBABILITIES_STAGE_2 - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

OUTPUT_SLOT_SIMPLE_SEGMENTATION - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

OUTPUT_SLOT_SIMPLE_SEGMENTATION_STAGE_1 - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

OUTPUT_SLOT_SIMPLE_SEGMENTATION_STAGE_2 - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

OUTPUT_SLOT_UNCERTAINTY - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

OUTPUT_SLOT_UNCERTAINTY_STAGE_1 - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

OUTPUT_SLOT_UNCERTAINTY_STAGE_2 - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

OutputColumn() - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm.OutputColumn

OutputColumn(JIPipeExpressionParameter, JIPipeExpressionParameter) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm.OutputColumn

outputDims(long[], List<AxisType>, DatasetType, int[], int[]) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.ImgUtils

Compute chunk and block dimensions suitable for writing.

OutputFolderDataSource - Class in org.hkijena.jipipe.plugins.filesystem.datasources

OutputFolderDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.OutputFolderDataSource

OutputFolderDataSource(OutputFolderDataSource) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.OutputFolderDataSource

OutputParameters() - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

OutputParameters(IlastikAutoContextAlgorithm.OutputParameters) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

OutputParameters() - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters

OutputParameters(IlastikObjectClassificationAlgorithm.OutputParameters) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters

OutputParameters() - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters

OutputParameters(IlastikPixelClassificationAlgorithm.OutputParameters) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters

OutputParameters() - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters

OutputParameters(IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters

OutputParameters() - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters

OutputParameters(IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters) - Constructor for class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters

OutputParameters(AnalyzeSkeleton2D3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters

OutputParameters(AnalyzeSkeleton2D3DAlgorithm.OutputParameters, AnalyzeSkeleton2D3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters

OutputParameters() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm.OutputParameters

OutputParameters(OrientationVectorField2DAlgorithm.OutputParameters) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm.OutputParameters

OutputParameters() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm.OutputParameters

OutputParameters(CornerHarris2DAlgorithm.OutputParameters) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm.OutputParameters

OutputParameters() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm.OutputParameters

OutputParameters(OrientationFeatures2DAlgorithm.OutputParameters) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm.OutputParameters

OutputSelectedEvent(JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI, String) - Constructor for class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEvent

OutputSelectedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEventEmitter

OutputSettings() - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings

OutputSettings(JIPipeRuntimePartition.OutputSettings) - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings

OutputSettings() - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm.OutputSettings

OutputSettings(DBSCANClusteringAlgorithm.OutputSettings) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm.OutputSettings

OutputSettings() - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm.OutputSettings

OutputSettings(FuzzyKMeansClusteringAlgorithm.OutputSettings) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm.OutputSettings

OutputSettings() - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm.OutputSettings

OutputSettings(KMeansClusteringAlgorithm.OutputSettings) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm.OutputSettings

OutputSlotMapParameterCollection - Class in org.hkijena.jipipe.plugins.parameters.library.graph

Parameter that holds a value for each data slot

OutputSlotMapParameterCollection(Class<?>, JIPipeGraphNode, Function<JIPipeDataSlotInfo, Object>, boolean) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.graph.OutputSlotMapParameterCollection

Creates a new instance

OutputSlotMapParameterCollection(Class<?>, JIPipeGraphNode, Function<JIPipeDataSlotInfo, Object>) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.graph.OutputSlotMapParameterCollection

Creates a new instance

OutputSlotMapParameterCollection(Class<?>, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.graph.OutputSlotMapParameterCollection

Creates a new instance

outputSlotsToPython(StringBuilder, List<JIPipeOutputDataSlot>, Map<String, Path>) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

outputSlotsToR(StringBuilder, List<JIPipeOutputDataSlot>, Map<String, Path>) - Static method in class org.hkijena.jipipe.plugins.r.RUtils

OutputTableColumnInfo(int, String, boolean) - Constructor for class org.hkijena.jipipe.plugins.clij2.CLIJCommandNodeInfo.OutputTableColumnInfo

OverlapMeasureLabelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

OverlapMeasureLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.OverlapMeasureLabelsAlgorithm

OverlapMeasureLabelsAlgorithm(OverlapMeasureLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.OverlapMeasureLabelsAlgorithm

OverlapStatistics - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.parameters

OverlapStatisticsSetParameter - Class in org.hkijena.jipipe.plugins.imagejalgorithms.parameters

A DynamicSetParameter that contains image statistics measurements.

OverlapStatisticsSetParameter() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OverlapStatisticsSetParameter

OverlapStatisticsSetParameter(OverlapStatisticsSetParameter) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OverlapStatisticsSetParameter

OverlapStatisticsSetParameter(Set<OverlapStatistics>) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OverlapStatisticsSetParameter

OverlayImagesAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

Deprecated.

Use BlendImagesAlgorithm instead

OverlayImagesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.OverlayImagesAlgorithm

Deprecated.

OverlayImagesAlgorithm(OverlayImagesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.OverlayImagesAlgorithm

Deprecated.

OverlayImagesAlgorithm.Channel - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

Deprecated.

OverlayJIPipeDesktopColorIcon - Class in org.hkijena.jipipe.desktop.commons.components.icons

Icon that overlays a color rectangle on top of another icon

OverlayJIPipeDesktopColorIcon(Icon, Rectangle, boolean, boolean) - Constructor for class org.hkijena.jipipe.desktop.commons.components.icons.OverlayJIPipeDesktopColorIcon

OVERRIDE_USER_DIR_BASE - Static variable in class org.hkijena.jipipe.JIPipe

Allows to override the directory where profiles are located (needs to be done before init!)

OverwriteAnnotations - Class in org.hkijena.jipipe.plugins.annotation.algorithms

OverwriteAnnotations(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.OverwriteAnnotations

OverwriteAnnotations(OverwriteAnnotations) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.OverwriteAnnotations

OwningStore<T> - Class in org.hkijena.jipipe.utils.data

A store that keeps a strong reference to the data

OwningStore(T) - Constructor for class org.hkijena.jipipe.utils.data.OwningStore

P

packDataTable(JXTable) - Static method in class org.hkijena.jipipe.utils.UIUtils

packAll() for a data table (with a limit)

padSelectedTab(int, int) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI.TabbedPaneLayout

paint(Graphics) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

paint(Graphics) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorMinimap

paint(Graphics) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopCompactRunnableQueueButton

paint(Graphics) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

paint(Graphics) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.FormPanelContentPanel

paint(Graphics) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanelImageComponent

paint(Graphics) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopImageFrameComponent

paint(Graphics) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMessagePanel.Message

paint(Graphics, Shape) - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Paints the View.

paint(Graphics2D, int, int, int, int) - Method in class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopDropShadowRenderer

paint(Graphics, JComponent) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

paint(Graphics) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.ThumbRenderer

paint(Graphics) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.TrackRenderer

paint(Graphics) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI.ThumbRenderer

paint(Graphics) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI.TrackRenderer

paintAfterNodesAndEdges(Graphics2D) - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeToggleableGraphEditorTool

paintAfterNodesAndEdges(Graphics2D) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

paintBelowNodesAfterEdges(Graphics2D) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

paintBelowNodesAfterEdges(Graphics2D) - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeToggleableGraphEditorTool

paintBelowNodesAndEdges(Graphics2D) - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeToggleableGraphEditorTool

paintBorder(Component, Graphics, int, int, int, int) - Method in class org.hkijena.jipipe.utils.ui.RoundedLineBorder

paintBottomTabBorder(int, Graphics, int, int, int, int, int, int, boolean) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

paintComponent(Graphics) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

paintComponent(Graphics) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

paintComponent(Graphics) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.GroupHeaderPanel

paintComponent(Graphics) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneGhostGlassPane

paintComponent(Graphics) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.CustomGradientThumbRenderer

paintComponent(Graphics) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.CustomGradientTrackRenderer

paintComponent(Graphics) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.ThumbRenderer

paintComponent(Graphics) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.TrackRenderer

paintComponent(Graphics) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

paintComponent(Graphics) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI.ThumbRenderer

paintComponent(Graphics) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI.TrackRenderer

paintContentBorderBottomEdge(Graphics, int, int, int, int, int, int) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

paintContentBorderLeftEdge(Graphics, int, int, int, int, int, int) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

paintContentBorderRightEdge(Graphics, int, int, int, int, int, int) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

paintContentBorderTopEdge(Graphics, int, int, int, int, int, int) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

paintDragOverlay(Graphics2D, int, int, int, int) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

paintDragOverlay(Graphics2D, int, int, int, int) - Method in class org.hkijena.jipipe.plugins.graphannotation.tools.ArrowAnnotationGraphNodeTool

paintEdge(Graphics2D, Point, Rectangle, Point, JIPipeGraphEdge.Shape, double, int, int, boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Draws an edge between source point and the target point

paintFocusIndicator(Graphics, int, Rectangle[], int, Rectangle, Rectangle, boolean) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

PaintGenerator - Interface in org.hkijena.jipipe.plugins.parameters.library.ranges

paintHighlightBelowTab() - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopAnimatedIcon

paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.MonochromeJIPipeDesktopColorIcon

paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.OverlayJIPipeDesktopColorIcon

paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.SolidColorIcon

paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.SpinnerIcon

paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelColorMapIcon

paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.plugins.parameters.library.colors.ColorMapIcon

paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.plugins.plots.utils.ColorMapIcon

paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.utils.CompositeIcon

paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.utils.ui.CheckBoxIcon

paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.utils.ui.CheckBoxMenuItemIcon

paintIndex - Variable in class org.hkijena.jipipe.plugins.plots.utils.ColorMapSupplier

paintLeftTabBorder(int, Graphics, int, int, int, int, int, int, boolean) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

paintMinimap(Graphics2D, int, int, int, int, BasicStroke, BasicStroke, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode

paintMiniMap(Graphics2D, double, int, int) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Draws a minimap of this canvas.

paintMinimap(Graphics2D, int, int, int, int, BasicStroke, BasicStroke, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopAnnotationGraphNodeUI

paintMinimap(Graphics2D, int, int, int, int, BasicStroke, BasicStroke, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

paintMinimap(Graphics2D, int, int, int, int, BasicStroke, BasicStroke, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ArrowAnnotationGraphNode

paintMouse(JIPipeDesktopGraphCanvasUI, Point, int, Graphics2D) - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeToggleableGraphEditorTool

paintNode(Graphics2D, JIPipeDesktopAnnotationGraphNodeUI, double) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode

paintNode(Graphics2D) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopAnnotationGraphNodeUI

paintNode(Graphics2D) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

paintNode(Graphics2D, JIPipeDesktopAnnotationGraphNodeUI, double) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode

paintNode(Graphics2D, JIPipeDesktopAnnotationGraphNodeUI, double) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ArrowAnnotationGraphNode

paintRightTabBorder(int, Graphics, int, int, int, int, int, int, boolean) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

paintShape(Graphics2D, JIPipeDesktopAnnotationGraphNodeUI, double) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode

paintShape(Graphics2D, JIPipeDesktopAnnotationGraphNodeUI, double) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode

paintShape(Graphics2D, JIPipeDesktopAnnotationGraphNodeUI, double) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.TextBoxAnnotationGraphNode

paintTabBackground(Graphics, int, int, int, int, int, int, boolean) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

paintTabBorder(Graphics, int, int, int, int, int, int, boolean) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

paintThumb(Graphics) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernSliderUI

paintTopTabBorder(int, Graphics, int, int, int, int, int, int, boolean) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

paintTrack(Graphics) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernSliderUI

Pair(K, V) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ConcaveHullMoreiraSantos.Pair

PairDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.api.pairs

Editor for PairParameter

PairDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.pairs.PairDesktopParameterEditorUI

PairOfPointsImageJ2ShapeData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.shapes

PairOfPointsImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.PairOfPointsImageJ2ShapeData

PairOfPointsImageJ2ShapeData(PairOfPointsImageJ2ShapeData) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.PairOfPointsImageJ2ShapeData

PairOfPointsImageJ2ShapeData(PairOfPointsShape) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.PairOfPointsImageJ2ShapeData

PairOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

Operator that is used to make different statements The return value is the right statement

PairOperator(int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.PairOperator

PairParameter<K,V> - Class in org.hkijena.jipipe.plugins.parameters.api.pairs

Parameter equivalent of a map entry.

PairParameter(Class<K>, Class<V>) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameter

PairParameter(PairParameter<K, V>) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameter

Creates a copy.

PairParameter.Deserializer<K,V> - Class in org.hkijena.jipipe.plugins.parameters.api.pairs

Deserializes the parameter

PairParameter.Serializer - Class in org.hkijena.jipipe.plugins.parameters.api.pairs

Serializes the parameter

PairParameterKeyAccess<K,V> - Class in org.hkijena.jipipe.plugins.parameters.api.pairs

Parameter access for the key entry in PairParameter

PairParameterKeyAccess(JIPipeParameterAccess, PairParameter<K, V>) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterKeyAccess

Creates a new instance

PairParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.parameters.api.pairs

Allows to control the behavior of PairParameter

PairParameterValueAccess<K,V> - Class in org.hkijena.jipipe.plugins.parameters.api.pairs

Parameter access for the key entry in PairParameter

PairParameterValueAccess(JIPipeParameterAccess, PairParameter<K, V>) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterValueAccess

Creates a new instance

Panel(String) - Constructor for class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

PanelSideVisibilityChangedEvent(Object, JIPipeDesktopDockPanel.PanelSide, boolean) - Constructor for class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.PanelSideVisibilityChangedEvent

PanelSideVisibilityChangedEventEmitter() - Constructor for class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.PanelSideVisibilityChangedEventEmitter

PARAM_BOTTOM - Static variable in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

PARAM_BOTTOM - Static variable in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

PARAM_HEIGHT - Static variable in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

PARAM_HEIGHT - Static variable in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

PARAM_LEFT - Static variable in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

PARAM_LEFT - Static variable in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

PARAM_RIGHT - Static variable in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

PARAM_RIGHT - Static variable in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

PARAM_TOP - Static variable in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

PARAM_TOP - Static variable in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

PARAM_WIDTH - Static variable in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

PARAM_WIDTH - Static variable in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

ParameterChangedEvent(Object, String) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterChangedEvent

ParameterChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterChangedEventEmitter

ParameterCollectionList - Class in org.hkijena.jipipe.plugins.parameters.library.collections

A list of multiple JIPipeParameterCollection items (internally JIPipeDynamicParameterCollection.

ParameterCollectionList() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.collections.ParameterCollectionList

ParameterCollectionList(ParameterCollectionList) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.collections.ParameterCollectionList

ParameterCollectionList.Deserializer - Class in org.hkijena.jipipe.plugins.parameters.library.collections

ParameterCollectionList.Serializer - Class in org.hkijena.jipipe.plugins.parameters.library.collections

ParameterCollectionListTemplate - Annotation Type in org.hkijena.jipipe.plugins.parameters.library.collections

Sets the template class for ParameterCollectionList.

parameterCollectionToJsonString(JIPipeParameterCollection) - Static method in class org.hkijena.jipipe.utils.SerializationUtils

Serializes a JIPipeParameterCollection into a JSON string

ParameterColumn() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ParameterColumn

Creates a new instance.

ParameterColumn(ParameterTable.ParameterColumn) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ParameterColumn

Creates a copy

ParameterColumn(String, String, Class<?>) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ParameterColumn

Creates a new instance

ParameterEntry(String, String, String, Class<?>, Object) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterKeyPickerUI.ParameterEntry

ParameterEntry(Set<Class<?>>) - Constructor for class org.hkijena.jipipe.desktop.commons.components.parameters.JIPipeDesktopDynamicParameterEditorDialog.ParameterEntry

ParameterEntryListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.parameters.JIPipeDesktopDynamicParameterEditorDialog.ParameterEntryListCellRenderer

Creates a new renderer

ParameterExplorerContextMenuAction - Class in org.hkijena.jipipe.plugins.utils.contextmenu

ParameterExplorerContextMenuAction() - Constructor for class org.hkijena.jipipe.plugins.utils.contextmenu.ParameterExplorerContextMenuAction

ParameterFormData - Class in org.hkijena.jipipe.plugins.forms.datatypes

FormData that is put into a JIPipeDesktopFormPanel

ParameterFormData() - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.ParameterFormData

ParameterFormData(ParameterFormData) - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.ParameterFormData

ParameterImageJ2ModuleInput<ModuleType,JIPipeType> - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.input

Handles input parameters (passed from/to JIPipe parameters)

ParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.ParameterImageJ2ModuleInput

ParameterImageJ2ModuleOutput<ModuleType,JIPipeType> - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.output

Handles input parameters (passed from/to JIPipe parameters)

ParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput

ParameterInfo - Class in org.hkijena.jipipe.plugins.expressions

Information about the parameters

ParameterInfo(String, String, Class<?>...) - Constructor for class org.hkijena.jipipe.plugins.expressions.ParameterInfo

ParameterModuleIO - Interface in org.hkijena.jipipe.plugins.imagej2.io.parameters

ParameterReferencesChangedEvent - Class in org.hkijena.jipipe.api.grouping.events

Triggered by GraphNodeParameterReferenceGroupCollection and related classes

ParameterReferencesChangedEvent(Object) - Constructor for class org.hkijena.jipipe.api.grouping.events.ParameterReferencesChangedEvent

ParameterReferencesChangedEventEmitter - Class in org.hkijena.jipipe.api.grouping.events

ParameterReferencesChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.grouping.events.ParameterReferencesChangedEventEmitter

ParameterReferencesChangedEventListener - Interface in org.hkijena.jipipe.api.grouping.events

ParametersData - Class in org.hkijena.jipipe.plugins.multiparameters.datatypes

Stores the parameters of an algorithm

ParametersData() - Constructor for class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersData

ParametersData.Deserializer - Class in org.hkijena.jipipe.plugins.multiparameters.datatypes

ParametersData.Serializer - Class in org.hkijena.jipipe.plugins.multiparameters.datatypes

Serializes ParametersData

ParametersDataToResultsTableDataConverter - Class in org.hkijena.jipipe.plugins.multiparameters.converters

ParametersDataToResultsTableDataConverter() - Constructor for class org.hkijena.jipipe.plugins.multiparameters.converters.ParametersDataToResultsTableDataConverter

ParametersDataViewer - Class in org.hkijena.jipipe.plugins.multiparameters.datatypes

ParametersDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersDataViewer

ParametersDataViewerPanel - Class in org.hkijena.jipipe.plugins.multiparameters.datatypes

ParametersDataViewerPanel(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersDataViewerPanel

ParametersLegacyDataViewerWindow - Class in org.hkijena.jipipe.plugins.multiparameters.datatypes

ParametersLegacyDataViewerWindow(JIPipeDesktopWorkbench, JIPipeDataTableDataSource, String) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersLegacyDataViewerWindow

ParametersToAnnotationsAlgorithm - Class in org.hkijena.jipipe.plugins.multiparameters.nodes

ParametersToAnnotationsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.ParametersToAnnotationsAlgorithm

ParametersToAnnotationsAlgorithm(ParametersToAnnotationsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.multiparameters.nodes.ParametersToAnnotationsAlgorithm

parametersToPython(StringBuilder, JIPipeParameterCollection) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

Converts parameters into Python code.

parametersToR(StringBuilder, JIPipeParameterCollection) - Static method in class org.hkijena.jipipe.plugins.r.RUtils

Converts parameters into R code.

ParameterStructureChangedEvent(JIPipeParameterCollection) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterStructureChangedEvent

ParameterStructureChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterStructureChangedEventEmitter

parametersWereEdited() - Method in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderInserterUI

Checks if parameters were edited.

ParameterTable - Class in org.hkijena.jipipe.plugins.parameters.library.table

Table of other parameters

ParameterTable() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

Creates a new table

ParameterTable(ParameterTable) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

Creates a copy

ParameterTable.Deserializer - Class in org.hkijena.jipipe.plugins.parameters.library.table

Deserializes a ParameterTable

ParameterTable.ModelChangedEvent - Class in org.hkijena.jipipe.plugins.parameters.library.table

ParameterTable.ModelChangedEventEmitter - Class in org.hkijena.jipipe.plugins.parameters.library.table

ParameterTable.ModelChangedEventListener - Interface in org.hkijena.jipipe.plugins.parameters.library.table

ParameterTable.ParameterColumn - Class in org.hkijena.jipipe.plugins.parameters.library.table

Column in the parameter table

ParameterTable.Serializer - Class in org.hkijena.jipipe.plugins.parameters.library.table

Serializes a ParameterTable

ParameterTableCellAccess - Class in org.hkijena.jipipe.plugins.parameters.library.table

Implements the access to table cell

ParameterTableCellAccess(JIPipeParameterAccess, ParameterTable, int, int) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableCellAccess

Creates a new instance

ParameterTableEditorWindow - Class in org.hkijena.jipipe.plugins.parameters.library.table

ParameterTesterJIPipeDesktopMenuExtension - Class in org.hkijena.jipipe.plugins.parameters

Adds an entry "New table" to the JIPipe menu

ParameterTesterJIPipeDesktopMenuExtension(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.parameters.ParameterTesterJIPipeDesktopMenuExtension

Creates a new instance

parameterToSetting(Object) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.io.DefaultSettingsIO

parameterToSetting(Object) - Method in interface org.hkijena.jipipe.plugins.ijtrackmate.io.SettingsIO

parameterToSetting(Object) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.io.SpotFeaturePenaltyParameterListSettingsIO

ParameterTreeCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterKeyPickerUI.ParameterTreeCellRenderer

Creates a new instance

ParameterUIChangedEvent(JIPipeParameterCollection) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterUIChangedEvent

ParameterUIChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterUIChangedEventEmitter

ParameterUITester - Class in org.hkijena.jipipe.utils

UI that shows all parameter types

ParameterUITester(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.utils.ParameterUITester

Creates a new instance

ParameterUtils - Class in org.hkijena.jipipe.utils

ParameterValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts

ParameterValidationReportContext(JIPipeParameterCollection, String, String) - Constructor for class org.hkijena.jipipe.api.validation.contexts.ParameterValidationReportContext

ParameterValidationReportContext(JIPipeValidationReportContext, JIPipeParameterCollection, String, String) - Constructor for class org.hkijena.jipipe.api.validation.contexts.ParameterValidationReportContext

parse(List<String>) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser

parse(JIPipeExpressionCustomASTParser.TokenIterator) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser

parse(String) - Static method in class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

Parses a quantity from a string

PARSE_COLOR_DESCRIPTION - Static variable in class org.hkijena.jipipe.utils.ColorUtils

PARSE_QUANTITY_PATTERN - Static variable in class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

parseColor(String) - Static method in class org.hkijena.jipipe.utils.ColorUtils

Parses a color

parseDouble(String) - Static method in class org.hkijena.jipipe.utils.StringUtils

parseFloat(String) - Static method in class org.hkijena.jipipe.utils.StringUtils

parseInt(String) - Static method in class org.hkijena.jipipe.utils.StringUtils

parseJsonAxes(String) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.ImgUtils

Parse axes from JSON string.

ParseJsonFunction - Class in org.hkijena.jipipe.plugins.expressions.functions

ParseJsonFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.ParseJsonFunction

parseSnakesAsTable(Path, Multimap<Integer, Integer>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ijfilaments.util.TSOAXUtils

parseSnakesTracks(Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ijfilaments.util.TSOAXUtils

parseVariableAssignment(JIPipeExpressionVariablesMap, JIPipeExpressionVariablesMap, String) - Static method in class org.hkijena.jipipe.plugins.expressions.functions.EvaluateFunction

passParametersToPython(PythonInterpreter, JIPipeCustomParameterCollection) - Static method in class org.hkijena.jipipe.utils.scripting.JythonUtils

PasswordDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.auth

Parameter editor for String

PasswordDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.auth.PasswordDesktopParameterEditorUI

PasswordParameter - Class in org.hkijena.jipipe.plugins.parameters.library.auth

A parameter that stores a password

PasswordParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.auth.PasswordParameter

PasswordParameter(String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.auth.PasswordParameter

PasswordParameter(PasswordParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.auth.PasswordParameter

PasswordParameter.Deserializer - Class in org.hkijena.jipipe.plugins.parameters.library.auth

PasswordParameter.Serializer - Class in org.hkijena.jipipe.plugins.parameters.library.auth

pasteNodes(String) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

pasteNodes(JIPipeGraph) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

path - Variable in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetDescription

Internal dataset path in a file.

path - Variable in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetEntryProvider.DatasetEntry

PathCombineFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.filesystem

PathCombineFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.filesystem.PathCombineFunction

PathData - Class in org.hkijena.jipipe.plugins.filesystem.dataypes

Encapsulates a Path

PathData(Path) - Constructor for class org.hkijena.jipipe.plugins.filesystem.dataypes.PathData

Initializes file data from a file

PathData(String) - Constructor for class org.hkijena.jipipe.plugins.filesystem.dataypes.PathData

PathData() - Constructor for class org.hkijena.jipipe.plugins.filesystem.dataypes.PathData

PathDataFromTableImageJImporter - Class in org.hkijena.jipipe.plugins.filesystem.compat

PathDataFromTableImageJImporter(Class<? extends PathData>) - Constructor for class org.hkijena.jipipe.plugins.filesystem.compat.PathDataFromTableImageJImporter

PathDataImporterUI - Class in org.hkijena.jipipe.plugins.filesystem.compat

Imports PathData

PathDataImporterUI(JIPipeDesktopWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.plugins.filesystem.compat.PathDataImporterUI

PathDataSource - Class in org.hkijena.jipipe.plugins.filesystem.datasources

Provides an input file

PathDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.PathDataSource

Initializes the algorithm

PathDataSource(PathDataSource) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.PathDataSource

Copies the algorithm

PathDataToJIPipeOutputConverter - Class in org.hkijena.jipipe.plugins.utils.datatypes

PathDataToJIPipeOutputConverter() - Constructor for class org.hkijena.jipipe.plugins.utils.datatypes.PathDataToJIPipeOutputConverter

PathDataToTableImageJExporter - Class in org.hkijena.jipipe.plugins.filesystem.compat

PathDataToTableImageJExporter() - Constructor for class org.hkijena.jipipe.plugins.filesystem.compat.PathDataToTableImageJExporter

PathDataViewer - Class in org.hkijena.jipipe.plugins.filesystem.desktop

PathDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.filesystem.desktop.PathDataViewer

PathExistsFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.filesystem

PathExistsFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.filesystem.PathExistsFunction

PathFilterExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.expressions.variables

JIPipeExpressionVariablesInfo that defines one variable 'x' that references a filesystem path or file name.

PathFilterExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.expressions.variables.PathFilterExpressionParameterVariablesInfo

PathFormData - Class in org.hkijena.jipipe.plugins.forms.datatypes

PathFormData() - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

PathFormData(PathFormData) - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

PathFormGeneratorAlgorithm - Class in org.hkijena.jipipe.plugins.forms.algorithms.generators

PathFormGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.generators.PathFormGeneratorAlgorithm

PathFormGeneratorAlgorithm(PathFormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.generators.PathFormGeneratorAlgorithm

PathFromUserDataSource - Class in org.hkijena.jipipe.plugins.filesystem.datasources

PathFromUserDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.PathFromUserDataSource

PathFromUserDataSource(PathFromUserDataSource) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.PathFromUserDataSource

PathImageJDataExporterUI - Class in org.hkijena.jipipe.api.compat.ui

PathImageJDataExporterUI(JIPipeDesktopWorkbench, ImageJDataExportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ui.PathImageJDataExporterUI

PathImageJDataImporterUI - Class in org.hkijena.jipipe.api.compat.ui

PathImageJDataImporterUI(JIPipeDesktopWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ui.PathImageJDataImporterUI

PathIOMode - Enum in org.hkijena.jipipe.utils

Determines if a path is opened or saved

PathList - Class in org.hkijena.jipipe.plugins.parameters.library.filesystem

Collection of paths.

PathList() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.filesystem.PathList

Creates a new instance

PathList(Collection<Path>) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.filesystem.PathList

Creates a copy

PathListDataSource - Class in org.hkijena.jipipe.plugins.filesystem.datasources

Provides an input folder

PathListDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.PathListDataSource

Creates a new instance

PathListDataSource(PathListDataSource) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.PathListDataSource

Copies the algorithm

PathParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.parameters.library.filesystem

Attached to the getter or setter of Path parameter to setup the GUI

PathQueryExpression - Class in org.hkijena.jipipe.plugins.expressions

Expression for querying strings

PathQueryExpression() - Constructor for class org.hkijena.jipipe.plugins.expressions.PathQueryExpression

PathQueryExpression(String) - Constructor for class org.hkijena.jipipe.plugins.expressions.PathQueryExpression

PathQueryExpression(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.plugins.expressions.PathQueryExpression

PathsToJIPipeProjectParametersAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms.meta

PathsToJIPipeProjectParametersAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.meta.PathsToJIPipeProjectParametersAlgorithm

PathsToJIPipeProjectParametersAlgorithm(PathsToJIPipeProjectParametersAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.meta.PathsToJIPipeProjectParametersAlgorithm

pathToZARRURI(Path) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ZARRUtils

PathType - Enum in org.hkijena.jipipe.utils

Determines the type of selected path

PathUtils - Class in org.hkijena.jipipe.utils

Utilities for handling paths

peekNext() - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.TokenIterator

PencilMaskDrawer2DTool - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer

PencilMaskDrawer2DTool(MaskDrawerPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PencilMaskDrawer2DTool

PencilMaskDrawer2DTool.PencilShape - Enum in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer

percentage(String) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

PercentageFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.math

PercentageFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.math.PercentageFunction

PercentileFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

PercentileFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.PercentileFunction

PercentileThreshold8U2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

Wrapper around ImageProcessor

PercentileThreshold8U2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.PercentileThreshold8U2DAlgorithm

Instantiates a new node type.

PercentileThreshold8U2DAlgorithm(PercentileThreshold8U2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.PercentileThreshold8U2DAlgorithm

Instantiates a new node type.

PeriodicImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds

PeriodicImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.PeriodicImageJ2OutOfBoundsFactoryData

PeriodicImageJ2OutOfBoundsFactoryData(OutOfBoundsPeriodicFactory<?, ?>) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.PeriodicImageJ2OutOfBoundsFactoryData

PeriodicImageJ2OutOfBoundsFactoryData(PeriodicImageJ2OutOfBoundsFactoryData) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.PeriodicImageJ2OutOfBoundsFactoryData

PeriodicLineImageJ2ShapeData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.shapes

PeriodicLineImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData

PeriodicLineImageJ2ShapeData(PeriodicLineImageJ2ShapeData) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData

PeriodicLineImageJ2ShapeData(PeriodicLineShape) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData

Phansalkar(ImageProcessor, int, double, double, double, double, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm

PhansalkarLocalAutoThreshold2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local

Segmenter node that thresholds via an auto threshold Based on code from fiji.threshold.Auto_Local_Threshold

PhansalkarLocalAutoThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm

PhansalkarLocalAutoThreshold2DAlgorithm(PhansalkarLocalAutoThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm

pickAddSlotAtMousePosition(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

pickNodeUI(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

pickOrGenerateColumn(ResultsTableData, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.TableColumnSourceExpressionParameter

Picks or generates a table column based on selecting by name, matching one column by boolean expressions, or using a mathematical expression.

pickSlotAtMousePosition(MouseEvent) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

pickSlotAtMousePosition(Point) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

Pie2DJFreeChartPlotData - Class in org.hkijena.jipipe.plugins.plots.datatypes

Generates a Pie chart Series table columns: Amount (Double), Category (String) Multiple series: No

Pie2DJFreeChartPlotData() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.Pie2DJFreeChartPlotData

Creates a new instance

Pie2DJFreeChartPlotData(Pie2DJFreeChartPlotData) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.Pie2DJFreeChartPlotData

Creates a copy

Pie3DJFreeChartPlotData - Class in org.hkijena.jipipe.plugins.plots.datatypes

Generates a Pie chart Series table columns: Amount (Double), Category (String) Multiple series: No

Pie3DJFreeChartPlotData() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.Pie3DJFreeChartPlotData

Creates a new instance

Pie3DJFreeChartPlotData(Pie3DJFreeChartPlotData) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.Pie3DJFreeChartPlotData

Creates a copy

PieJFreeChartPlotData - Class in org.hkijena.jipipe.plugins.plots.datatypes

Contains data for pie plots.

PieJFreeChartPlotData() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.PieJFreeChartPlotData

Creates a new instance

PieJFreeChartPlotData(PieJFreeChartPlotData) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.PieJFreeChartPlotData

Creates a copy

PinnedDummyNodeTypeCategory() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.PinnedDummyNodeTypeCategory

PipelineRenderPlugin - Class in org.hkijena.jipipe.plugins.pipelinerender

Extension containing some additional tools

PipelineRenderPlugin() - Constructor for class org.hkijena.jipipe.plugins.pipelinerender.PipelineRenderPlugin

PipelineRenderTool - Class in org.hkijena.jipipe.plugins.pipelinerender

PipelineRenderTool(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.pipelinerender.PipelineRenderTool

Creates a new instance

PixelCoordinate2DExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

Variable source that allows to address x, y

PixelCoordinate2DExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.PixelCoordinate2DExpressionParameterVariablesInfo

PixelCoordinate5DExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

Variable source that allows to address x, y

PixelCoordinate5DExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.PixelCoordinate5DExpressionParameterVariablesInfo

PixelHoverEvent(ImageViewerPanelCanvas2D, Point, MouseEvent) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.PixelHoverEvent

PixelHoverEventEmitter() - Constructor for class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.PixelHoverEventEmitter

PixelInfoPlugin2D - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d

PixelInfoPlugin2D(JIPipeDesktopLegacyImageViewer) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.PixelInfoPlugin2D

pixelsToUnit(Quantity, Quantity, Quantity, String) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.Point3d

place(Rectangle, Rectangle, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

Generates the rectangle defined by the definition.

placeInside(Rectangle, Rectangle) - Method in enum org.hkijena.jipipe.plugins.parameters.library.roi.Anchor

Places the inner rectangle into the outer rectangle according to the anchor

PlotDataSlotPreview - Class in org.hkijena.jipipe.plugins.plots.ui.resultanalysis

Renders a plot data as table cell

PlotDataSlotPreview(JIPipeDesktopProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableRowInfo, JIPipeDataAnnotationInfo) - Constructor for class org.hkijena.jipipe.plugins.plots.ui.resultanalysis.PlotDataSlotPreview

Creates a new renderer

PlotsPlugin - Class in org.hkijena.jipipe.plugins.plots

Provides a standard selection of plots

PlotsPlugin() - Constructor for class org.hkijena.jipipe.plugins.plots.PlotsPlugin

PlotTables2Algorithm - Class in org.hkijena.jipipe.plugins.plots.nodes

Algorithm that creates JFreeChartPlotData from ResultsTableData This is an improved version of PlotTables2Algorithm that is linked directly to a specific plot

PlotTables2Algorithm(PlotTables2AlgorithmInfo) - Constructor for class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2Algorithm

Creates a new instance

PlotTables2Algorithm(PlotTables2Algorithm) - Constructor for class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2Algorithm

Creates a copy

PlotTables2AlgorithmInfo - Class in org.hkijena.jipipe.plugins.plots.nodes

PlotTables2AlgorithmInfo(JIPipeDataInfo) - Constructor for class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2AlgorithmInfo

PlotTablesAlgorithm - Class in org.hkijena.jipipe.plugins.plots.nodes

Deprecated.

Instead, the new dynamically generated plotting should be utilized

PlotTablesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.plots.nodes.PlotTablesAlgorithm

Deprecated.

Creates a new instance

PlotTablesAlgorithm(PlotTablesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.plots.nodes.PlotTablesAlgorithm

Deprecated.

Creates a copy

PlotTablesAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.plots.nodes

Deprecated.

PlotToImageTypeConverter - Class in org.hkijena.jipipe.plugins.imagejdatatypes.converters

PlotToImageTypeConverter() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.converters.PlotToImageTypeConverter

PlotToTableConverter - Class in org.hkijena.jipipe.plugins.plots.converters

PlotToTableConverter() - Constructor for class org.hkijena.jipipe.plugins.plots.converters.PlotToTableConverter

PluginCategoriesEnumParameter - Class in org.hkijena.jipipe.plugins.parameters.library.jipipe

Categories enum (editable) that is used in metadata

PluginCategoriesEnumParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

PluginCategoriesEnumParameter(DynamicStringEnumParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

PluginCategoriesEnumParameter(String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.PluginCategoriesEnumParameter

PluginCategoriesEnumParameter.List - Class in org.hkijena.jipipe.plugins.parameters.library.jipipe

PluginEntry(JIPipePlugin) - Constructor for class org.hkijena.jipipe.desktop.app.plugins.pluginsmanager.JIPipeDesktopPluginManagerUI.PluginEntry

PluginEntryListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.plugins.pluginsmanager.JIPipeDesktopPluginManagerUI.PluginEntryListCellRenderer

PMCCBlockFlowAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow

Adapted from mpicbg.ij.plugin.PMCCBlockFlow, as the methods there are all protected/private

PMCCBlockFlowAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm

PMCCBlockFlowAlgorithm(PMCCBlockFlowAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm

Point3d - Class in org.hkijena.jipipe.plugins.ijfilaments.util

Point3d() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.Point3d

Point3d(double, double, double) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.Point3d

Point3d(Point3d) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.Point3d

PointRange - Class in org.hkijena.jipipe.utils

Stores three points, representing the center point, and an area around it All values are absolute.

PointRange() - Constructor for class org.hkijena.jipipe.utils.PointRange

Creates a new point range at 0, 0 without areas around them

PointRange(PointRange) - Constructor for class org.hkijena.jipipe.utils.PointRange

PointRange(int, int) - Constructor for class org.hkijena.jipipe.utils.PointRange

Creates a new point range without margins around it

PointRange(Point, Point, Point) - Constructor for class org.hkijena.jipipe.utils.PointRange

Creates a point range and initializes all values

pointsToRectangle(int, int, int, int) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Creates a Rectangle from two points (x1, y1) and (x2, y2).

pointsToRectangle(double, double, double, double) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Creates a Rectangle2D.Double from two points (x1, y1) and (x2, y2).

PolygonMaskDrawer2DTool - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer

Polygon drawing Allows left-click canvas dragging

PolygonMaskDrawer2DTool(MaskDrawerPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PolygonMaskDrawer2DTool

postMaskChangedEvent() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawer2DTool

Posts a mask changed event to the viewer' canvas event bus

postOnDataChanged() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewer

Called when the data browser was changed.

postOnDataChanged() - Method in class org.hkijena.jipipe.plugins.core.viewers.JIPipeDataTableDataViewer

postOnDataChanged() - Method in class org.hkijena.jipipe.plugins.filesystem.desktop.PathDataViewer

postOnDataChanged() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ImagePlusDataViewer

postOnDataChanged() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ResultsTableDataViewer

postOnDataChanged() - Method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersDataViewer

postOnDataChanged() - Method in class org.hkijena.jipipe.plugins.omero.viewers.OMERODataViewer

postOnDataChanged() - Method in class org.hkijena.jipipe.plugins.plots.viewers.JFreeChartPlotDataViewer

postOnDataChanged() - Method in class org.hkijena.jipipe.plugins.strings.StringDataViewer

postOnDataChanged() - Method in class org.hkijena.jipipe.plugins.tables.display.TableColumnDataViewer

postprocess(JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.JIPipeJavaPlugin

Called after registration.

postprocess(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.ImageJAlgorithmsPlugin

postprocess(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesPlugin

postprocess(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.plots.PlotsPlugin

postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin2D

Called after the image has been drawn after the image has been drawn

postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.EllipseMaskDrawer2DTool

postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PencilMaskDrawer2DTool

postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PolygonMaskDrawer2DTool

postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.RectangleMaskDrawer2DTool

postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIPicker2DTool

postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in interface org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2DTool

Called after the image has been drawn after the image has been drawn

postprocessDrawForExport(BufferedImage, ImageSliceIndex, double) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

postprocessDrawForExport(BufferedImage, ImageSliceIndex, double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

postprocessDrawForExport(BufferedImage, ImageSliceIndex, double) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

postprocessDrawForExport(BufferedImage, ImageSliceIndex, double) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

postprocessDrawForExport(BufferedImage, ImageSliceIndex, double) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin2D

Called while exporting the image slice.

postprocessDrawForExport(BufferedImage, ImageSliceIndex, double) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

postprocessDrawForExport(BufferedImage, ImageSliceIndex, double) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

precision - Variable in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

preferredLayoutSize(Container) - Method in class org.hkijena.jipipe.desktop.commons.components.layouts.JIPipeDesktopFlowLayout

preferredLayoutSize(Container) - Method in class org.hkijena.jipipe.desktop.commons.components.layouts.JIPipeDesktopWrapLayout

Returns the preferred dimensions for this layout given the visible components in the specified target container.

preOnDataChanged() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewer

Called when the data browser was changed.

PretrainedCellpose2SegmentationModel - Enum in org.hkijena.jipipe.plugins.cellpose.parameters.cp2

PretrainedCellpose2SegmentationModelList - Class in org.hkijena.jipipe.plugins.cellpose.parameters.cp2

PretrainedCellpose2SegmentationModelList() - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.PretrainedCellpose2SegmentationModelList

PretrainedCellpose2SegmentationModelList(PretrainedCellpose2SegmentationModelList) - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.PretrainedCellpose2SegmentationModelList

PretrainedCellpose3DenoiseModel - Enum in org.hkijena.jipipe.plugins.cellpose.parameters.cp3

PretrainedCellpose3DenoiseModelList - Class in org.hkijena.jipipe.plugins.cellpose.parameters.cp3

PretrainedCellpose3DenoiseModelList() - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.PretrainedCellpose3DenoiseModelList

PretrainedCellpose3DenoiseModelList(PretrainedCellpose3DenoiseModelList) - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.PretrainedCellpose3DenoiseModelList

PretrainedCellpose3SegmentationModel - Enum in org.hkijena.jipipe.plugins.cellpose.parameters.cp3

PretrainedCellpose3SegmentationModelList - Class in org.hkijena.jipipe.plugins.cellpose.parameters.cp3

PretrainedCellpose3SegmentationModelList() - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.PretrainedCellpose3SegmentationModelList

PretrainedCellpose3SegmentationModelList(PretrainedCellpose3SegmentationModelList) - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.PretrainedCellpose3SegmentationModelList

PretrainedCellposeModelEnumItemInfo - Class in org.hkijena.jipipe.plugins.cellpose.parameters

PretrainedCellposeModelEnumItemInfo() - Constructor for class org.hkijena.jipipe.plugins.cellpose.parameters.PretrainedCellposeModelEnumItemInfo

PretrainedLegacyCellpose2InferenceModel - Enum in org.hkijena.jipipe.plugins.cellpose.legacy

Deprecated.

PretrainedLegacyCellpose2TrainingModel - Enum in org.hkijena.jipipe.plugins.cellpose.legacy

Deprecated.

PretrainedOmnipose0Model - Enum in org.hkijena.jipipe.plugins.omnipose.parameters

PretrainedOmnipose0ModelEnumItemInfo - Class in org.hkijena.jipipe.plugins.omnipose.parameters

PretrainedOmnipose0ModelEnumItemInfo() - Constructor for class org.hkijena.jipipe.plugins.omnipose.parameters.PretrainedOmnipose0ModelEnumItemInfo

PretrainedOmnipose0ModelList - Class in org.hkijena.jipipe.plugins.omnipose.parameters

PretrainedOmnipose0ModelList() - Constructor for class org.hkijena.jipipe.plugins.omnipose.parameters.PretrainedOmnipose0ModelList

PretrainedOmnipose0ModelList(PretrainedOmnipose0ModelList) - Constructor for class org.hkijena.jipipe.plugins.omnipose.parameters.PretrainedOmnipose0ModelList

PrettifyXMLAlgorithm - Class in org.hkijena.jipipe.plugins.strings.nodes.xml

PrettifyXMLAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.xml.PrettifyXMLAlgorithm

PrettifyXMLAlgorithm(PrettifyXMLAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.xml.PrettifyXMLAlgorithm

prettyPrint(String, int, boolean) - Static method in class org.hkijena.jipipe.utils.xml.XmlUtils

preview(int, int) - Method in interface org.hkijena.jipipe.api.data.JIPipeData

Deprecated.

preview(int, int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

preview(int, int) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeWeakDataReferenceData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.batchassistant.DataBatchStatusData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.clij2.datatypes.CLIJImageData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.filesystem.dataypes.PathData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.FormData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotsCollectionData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.ImageJ2DatasetData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorHSBData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorLABData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorHSBData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorLABData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorHSBData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorLABData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorHSBData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorLABData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorHSBData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorLABData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.LUTData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.OMEImageData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

preview(int, int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

previousSlide() - Method in class org.hkijena.jipipe.utils.ui.DotSlideshow

PRIMARY1 - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

PRIMARY1 - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

PRIMARY2 - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

PRIMARY2 - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

PRIMARY3 - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

PRIMARY3 - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

PRIMARY4 - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

PRIMARY4 - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

PRIMARY5 - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

PRIMARY5 - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

PRIMARY6 - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

PRIMARY6 - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

print() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReport

Prints messages to the standard error

PrintFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.util

PrintFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.util.PrintFunction

process(List<Object>) - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableWorker

process(ImagePlus, Morphology.Operation, Strel3D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm

process(List<String>) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Hough_Circle

process(ImageProcessor, Neighborhood2D) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LabelConnectedComponents

processComponentKeyEvent(KeyEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopRSyntaxTextField

ProcessEnvironment - Class in org.hkijena.jipipe.plugins.processes

ProcessEnvironment() - Constructor for class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

ProcessEnvironment(ProcessEnvironment) - Constructor for class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

ProcessEnvironment.List - Class in org.hkijena.jipipe.plugins.processes

A list of ProcessEnvironment

ProcessEnvironment.VariablesInfo - Class in org.hkijena.jipipe.plugins.processes

ProcessEnvironmentVariablesInfo - Class in org.hkijena.jipipe.plugins.utils.algorithms.processes

ProcessEnvironmentVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.processes.ProcessEnvironmentVariablesInfo

ProcessesPlugin - Class in org.hkijena.jipipe.plugins.processes

ProcessesPlugin() - Constructor for class org.hkijena.jipipe.plugins.processes.ProcessesPlugin

ProcessingItem() - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.ApplyExpressionToTableByColumnAlgorithm.ProcessingItem

processMouseEvent(MouseEvent) - Method in class org.hkijena.jipipe.utils.ui.ViewOnlyMenuItem

ProcessTextDataAlgorithm - Class in org.hkijena.jipipe.plugins.strings.nodes.text

ProcessTextDataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.text.ProcessTextDataAlgorithm

ProcessTextDataAlgorithm(ProcessTextDataAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.text.ProcessTextDataAlgorithm

ProcessTree(Process, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree

ProcessUtils - Class in org.hkijena.jipipe.utils

ProcessUtils.ExtendedExecutor - Class in org.hkijena.jipipe.utils

ProcessUtils.ProcessTree - Class in org.hkijena.jipipe.utils

Wrapper around an existing process that models a process tree

ProcessUtils.RunCancellationExecuteWatchdog - Class in org.hkijena.jipipe.utils

Based on ExecuteWatchdog.

ProcessUtils.RunCancellationWatchdog - Class in org.hkijena.jipipe.utils

A watchdog that monitors a sub-process of a JIPipeRunnable and watches for the JIPipeRunnable to be cancelled.

ProcessUtils.RunCancellationWatchdog.CancelledEvent - Class in org.hkijena.jipipe.utils

ProcessUtils.RunCancellationWatchdog.CancelledEventEmitter - Class in org.hkijena.jipipe.utils

ProcessUtils.RunCancellationWatchdog.CancelledEventListener - Interface in org.hkijena.jipipe.utils

progress(String, int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJLogWrapper

progress(String, double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJLogWrapper

ProgressEvent(JIPipeRunnableWorker, JIPipeProgressInfo.StatusUpdatedEvent) - Constructor for class org.hkijena.jipipe.api.run.JIPipeRunnable.ProgressEvent

ProgressEventEmitter() - Constructor for class org.hkijena.jipipe.api.run.JIPipeRunnable.ProgressEventEmitter

PROJECT_TYPE - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

PROJECT_TYPE - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

PROJECT_TYPES - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

PROJECT_TYPES - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

PROJECT_TYPES - Static variable in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

ProjectDirectoriesSettingsSheetWrapper(JIPipeProject) - Constructor for class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectDirectoriesSettingsSheetWrapper

ProjectMetadataSettingsSheetWrapper(JIPipeProject) - Constructor for class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectMetadataSettingsSheetWrapper

ProjectOpenedEvent(Path) - Constructor for class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopRecentProjectsListPanel.ProjectOpenedEvent

ProjectOpenedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopRecentProjectsListPanel.ProjectOpenedEventEmitter

ProjectParametersSettingsSheetWrapper(JIPipeProject) - Constructor for class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectParametersSettingsSheetWrapper

ProjectPermissionsSettingsSheetWrapper(JIPipeProject) - Constructor for class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI.ProjectPermissionsSettingsSheetWrapper

projectSupports(Path, String) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.IlastikUtils

ProjectTemplateEnum() - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeProjectDefaultsApplicationSettings.ProjectTemplateEnum

ProjectTemplateEnum(JIPipeProjectDefaultsApplicationSettings.ProjectTemplateEnum) - Constructor for class org.hkijena.jipipe.plugins.settings.JIPipeProjectDefaultsApplicationSettings.ProjectTemplateEnum

ProjectUserFolderDataSource - Class in org.hkijena.jipipe.plugins.filesystem.datasources

ProjectUserFolderDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.ProjectUserFolderDataSource

ProjectUserFolderDataSource(ProjectUserFolderDataSource) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.ProjectUserFolderDataSource

propertyChange(PropertyChangeEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

PruneBackupsRun - Class in org.hkijena.jipipe.api.backups

PruneBackupsRun(boolean, boolean) - Constructor for class org.hkijena.jipipe.api.backups.PruneBackupsRun

pruneEmptySessions(Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.backups.PruneBackupsRun

pull() - Method in class org.hkijena.jipipe.plugins.clij2.datatypes.CLIJImageData

Extracts ImagePlusData from the GPU memory

PullDataTableAnnotations - Class in org.hkijena.jipipe.plugins.utils.algorithms.datatable

PullDataTableAnnotations(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PullDataTableAnnotations

PullDataTableAnnotations(PullDataTableAnnotations) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PullDataTableAnnotations

push(JIPipeNotification) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox

PushDataTableAnnotations - Class in org.hkijena.jipipe.plugins.utils.algorithms.datatable

PushDataTableAnnotations(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PushDataTableAnnotations

PushDataTableAnnotations(PushDataTableAnnotations) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PushDataTableAnnotations

PushedEvent(JIPipeNotificationInbox, JIPipeNotification) - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.PushedEvent

PushedEventEmitter() - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.PushedEventEmitter

pushToLog(JIPipeRunnableLogEntry) - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopRunnableLogsCollection

put(ImageSliceIndex, BufferedImage) - Method in class org.hkijena.jipipe.plugins.imp.utils.ImpImageDataBuilder

put(int, int, int, BufferedImage) - Method in class org.hkijena.jipipe.plugins.imp.utils.ImpImageDataBuilder

put(String, boolean, JIPipeDesktopDockPanel.PanelLocation) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.State

putAnnotations(Map<String, JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionVariablesMap

Puts annotations into the variables

putAnnotations(List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionVariablesMap

Puts annotations into the variables

putAnnotationsIfAbsent(Collection<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionVariablesMap

putColumn(ImageProcessor, int, int, float[], int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Reslicer

putCommonVariables(JIPipeSingleIterationStep) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionVariablesMap

putCommonVariables(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionVariablesMap

putCommonVariables(JIPipeAlgorithm) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionVariablesMap

putCustomVariables(JIPipeCustomExpressionVariablesParameter) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionVariablesMap

Puts custom expression parameters (with default settings)

putGlobalVariables(JIPipeProject) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionVariablesMap

putProjectDirectories(Path, Map<String, Path>) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionVariablesMap

Puts the project-related directories into the variables

putRow(ImageProcessor, int, int, float[], int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Reslicer

putToMap(ImageHandler, int, int, Map<ImageSliceIndex, ImageProcessor>) - Static method in class org.hkijena.jipipe.plugins.ij3d.IJ3DUtils

PythonArgumentsVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.python.PythonEnvironment.PythonArgumentsVariablesInfo

PythonEnvironment - Class in org.hkijena.jipipe.plugins.python

Parameter that describes a Python environment

PythonEnvironment() - Constructor for class org.hkijena.jipipe.plugins.python.PythonEnvironment

PythonEnvironment(PythonEnvironmentType, JIPipeExpressionParameter, Path) - Constructor for class org.hkijena.jipipe.plugins.python.PythonEnvironment

PythonEnvironment(PythonEnvironment) - Constructor for class org.hkijena.jipipe.plugins.python.PythonEnvironment

PythonEnvironment.List - Class in org.hkijena.jipipe.plugins.python

A list of PythonEnvironment

PythonEnvironment.PythonArgumentsVariablesInfo - Class in org.hkijena.jipipe.plugins.python

PythonEnvironmentAccessNode - Interface in org.hkijena.jipipe.plugins.python.algorithms.python

Interface that should be used by nodes that access the OMERO credentials environments

PythonEnvironmentType - Enum in org.hkijena.jipipe.plugins.python

The supported Python environment types

PythonPackageLibraryEnvironment - Class in org.hkijena.jipipe.plugins.python

An environment-like type that points to a package

PythonPackageLibraryEnvironment() - Constructor for class org.hkijena.jipipe.plugins.python.PythonPackageLibraryEnvironment

PythonPackageLibraryEnvironment(PythonPackageLibraryEnvironment) - Constructor for class org.hkijena.jipipe.plugins.python.PythonPackageLibraryEnvironment

PythonPlugin - Class in org.hkijena.jipipe.plugins.python

Python nodes

PythonPlugin() - Constructor for class org.hkijena.jipipe.plugins.python.PythonPlugin

PythonPluginApplicationSettings - Class in org.hkijena.jipipe.plugins.python

PythonPluginApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.python.PythonPluginApplicationSettings

PythonPluginProjectSettings - Class in org.hkijena.jipipe.plugins.python

PythonPluginProjectSettings() - Constructor for class org.hkijena.jipipe.plugins.python.PythonPluginProjectSettings

PythonScript - Class in org.hkijena.jipipe.plugins.parameters.library.scripts

Encapsulates ImageJ macro code to be detected by the parameter system

PythonScript() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.scripts.PythonScript

PythonScript(PythonScript) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.scripts.PythonScript

PythonScriptAlgorithm - Class in org.hkijena.jipipe.plugins.python.algorithms.python

An algorithm that allows to run Python code

PythonScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.python.algorithms.python.PythonScriptAlgorithm

Creates a new instance

PythonScriptAlgorithm(PythonScriptAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.python.algorithms.python.PythonScriptAlgorithm

Creates a copy

pythonSettingsAreValid() - Static method in class org.hkijena.jipipe.plugins.cellpose.Cellpose2PluginApplicationSettings

Checks the Python settings

pythonSettingsAreValid() - Static method in class org.hkijena.jipipe.plugins.cellpose.Cellpose3PluginApplicationSettings

Checks the Python settings

PythonUtils - Class in org.hkijena.jipipe.plugins.python

PythonUtils.RawPythonCode - Class in org.hkijena.jipipe.plugins.python

Q

Quantity - Class in org.hkijena.jipipe.plugins.parameters.library.quantities

A double with a unit

Quantity() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

Quantity(double, String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

Quantity(Quantity) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

Quantity.LengthUnit - Enum in org.hkijena.jipipe.plugins.parameters.library.quantities

Enum of image dimension units

QuantityConvertFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.quantities

QuantityConvertFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.quantities.QuantityConvertFunction

QuantityDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.quantities

QuantityDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.quantities.QuantityDesktopParameterEditorUI

QuantityGetUnitFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.quantities

QuantityGetUnitFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.quantities.QuantityGetUnitFunction

QuantityGetValueFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.quantities

QuantityGetValueFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.quantities.QuantityGetValueFunction

QuantityParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.parameters.library.quantities

query(JIPipeGraphNode, UUID, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache

query(JIPipeGraphNode, UUID, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache

query(String, JIPipeNodeDatabasePipelineVisibility, boolean, boolean, Set<String>) - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeLegacyNodeDatabaseSearch

query(String, JIPipeNodeDatabasePipelineVisibility, boolean, boolean, JIPipeSlotType, Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeLegacyNodeDatabaseSearch

query(JIPipeDataSlot) - Method in class org.hkijena.jipipe.plugins.expressions.DataRowQueryExpression

Returns matching rows

query(JIPipeDataSlot, Collection<Integer>) - Method in class org.hkijena.jipipe.plugins.expressions.DataRowQueryExpression

Returns matching rows

query(Map<String, String>) - Method in class org.hkijena.jipipe.plugins.expressions.NamedStringQueryExpression.List

Filters only the named strings where the query applies.

queryAll(Collection<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.expressions.AnnotationQueryExpression

Returns all annotations that match the query

queryAll(Collection<JIPipeDataAnnotation>) - Method in class org.hkijena.jipipe.plugins.expressions.DataAnnotationQueryExpression

Returns all annotations that match the query

queryAll(Collection<Path>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.PathQueryExpression

Generates an annotation value

queryAll(Collection<String>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.StringQueryExpression

Generates an annotation value

queryCachedArtifact(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry

queryCachedArtifacts(String...) - Method in class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry

Queries all cached artifacts (local and remote)

queryFast(Path, JIPipeProgressInfo, String...) - Static method in class org.hkijena.jipipe.utils.ProcessUtils

Queries standard output with a timeout.

queryFirst(Collection<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.expressions.AnnotationQueryExpression

Generates an annotation value

queryFirst(Collection<JIPipeDataAnnotation>) - Method in class org.hkijena.jipipe.plugins.expressions.DataAnnotationQueryExpression

Generates an annotation value

queryFirst(Collection<Path>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.PathQueryExpression

Queries a string out of the list

queryFirst(Collection<String>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.StringQueryExpression

Queries a string out of the list

queryLocalRepositories(String, String, String, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry

queryRemoteRepositories(String, String, String, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry

queryTextRanking(JIPipeNodeDatabaseEntry, String, List<String>) - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeLegacyNodeDatabaseSearch

R

r - Variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines.HoughLine

RadiansToDegreeColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a abs(x) function

RadiansToDegreeColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.RadiansToDegreeColumnOperation

raiseSelection(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

RaiseUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

RaiseUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RaiseUIContextAction

RANDOM - Static variable in class org.hkijena.jipipe.plugins.expressions.functions.math.RandomFunction

RandomAccessibleImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.data.input

Handling of RandomAccessible, assumed to be ImgPlus It is assumed that these refer to images (conversion to ImageJ2DatasetData)

RandomAccessibleImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.data.input.RandomAccessibleImageJ2ModuleInput

RandomAccessibleImageJ2ModuleOutput - Class in org.hkijena.jipipe.plugins.imagej2.io.data.output

Handling of RandomAccessible, assumed to be ImgPlus It is assumed that these refer to images (conversion to ImageJ2DatasetData)

RandomAccessibleImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.data.output.RandomAccessibleImageJ2ModuleOutput

RandomFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.math

RandomFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.math.RandomFunction

rank(Object, String[]) - Method in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderUI.EntryRankingFunction

rank - Variable in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetEntryProvider.DatasetEntry

rank(T, String[]) - Method in interface org.hkijena.jipipe.utils.search.RankingFunction

Ranks the value in conjunction with the filter strings

RankedData<T> - Class in org.hkijena.jipipe.utils.search

RankedData(T, String, int[]) - Constructor for class org.hkijena.jipipe.utils.search.RankedData

RankingFunction<T> - Interface in org.hkijena.jipipe.utils.search

Models a search ranking function

RArgumentsVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.r.REnvironment.RArgumentsVariablesInfo

RATIO_1_TO_1 - Static variable in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane

RATIO_1_TO_3 - Static variable in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane

RATIO_3_TO_1 - Static variable in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane

RatioUpdatedEvent(Object, JIPipeDesktopSplitPane.Ratio) - Constructor for class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.RatioUpdatedEvent

RatioUpdatedEventEmitter() - Constructor for class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.RatioUpdatedEventEmitter

RawImage2DExporterRun - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.runs

RawImage2DExporterRun(ImagePlus, Path) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.RawImage2DExporterRun

rawPythonCode(String) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

RawPythonCode(String) - Constructor for class org.hkijena.jipipe.plugins.python.PythonUtils.RawPythonCode

read(Path, boolean) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils

read() - Method in class org.hkijena.jipipe.utils.UnclosableInputStream

readBytes(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage

Reads a file as byte array

readCalibration(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

readDataset(File, String) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.Hdf5

Hdf5.readDataset(java.io.File, java.lang.String) with Ilastik ImgUtils DEFAULT_AXES and without callback.

readDataset(File, String, List<AxisType>) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.Hdf5

Hdf5.readDataset(java.io.File, java.lang.String) without callback.

readDataset(File, String, List<AxisType>, LongConsumer) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.Hdf5

Read HDF5 dataset contents.

ReadException(String, HDF5Exception) - Constructor for exception org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetEntryProvider.ReadException

readFromFile(Path, Class<T>) - Static method in class org.hkijena.jipipe.utils.json.JsonUtils

readFromString(String, Class<T>) - Static method in class org.hkijena.jipipe.utils.json.JsonUtils

readFromString(String) - Static method in class org.hkijena.jipipe.utils.xml.XmlUtils

readImage(Path, String, List<AxisType>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.IJ1Hdf5

Read HDF5 dataset contents.

readImageFrom(Path, boolean, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImagePlusAlgorithm

Loads an image from a file path

readJSON(Path, Class<?>) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage

Read data from a JSON file

readOMEXMLFromZARR(Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ZARRUtils

readText(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage

Reads a text from a file

realLocationToGrid(Point, double) - Method in enum org.hkijena.jipipe.desktop.app.grapheditor.JIPipeGraphViewMode

RealTypeParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.input

RealTypeParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.RealTypeParameterImageJ2ModuleInput

RealTypeParameterImageJ2ModuleOutput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.output

RealTypeParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.RealTypeParameterImageJ2ModuleOutput

rebuildAliasIds(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Recreates the alias Ids based on their name

rebuildAliasIds(boolean) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Re-assigns graph node Ids based on their name

RebuildAliasIdsTool - Class in org.hkijena.jipipe.plugins.tools

RebuildAliasIdsTool(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.tools.RebuildAliasIdsTool

Creates a new instance

rebuildCompartmentsFromGraph() - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Rebuilds the compartment list from the current state of the compartment graph

rebuildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewer

Called before rebuildRibbon()

rebuildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDefaultDataViewer

rebuildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

rebuildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ImagePlusDataViewer

rebuildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ResultsTableDataViewer

rebuildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.plots.viewers.JFreeChartPlotDataViewer

rebuildDock(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.tables.display.TableColumnDataViewer

rebuildImmediately() - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase

rebuildLater() - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseUpdater

rebuildLayout() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentPanel

rebuildMenu(JPopupMenu, List<Component>) - Static method in class org.hkijena.jipipe.utils.UIUtils

rebuildMenu(JMenu, List<Component>) - Static method in class org.hkijena.jipipe.utils.UIUtils

rebuildModel() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterAccessTreeUI

Recreates the tree model

rebuildPlot() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

Attempts to rebuild the current plot

RebuildReportRun(JIPipeProject, JIPipeDesktopProjectReportUI.ReportSettings) - Constructor for class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.RebuildReportRun

rebuildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewer

Called after preOnDataChanged() in the phase where the ribbon is re-built

rebuildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

rebuildRibbon() - Method in class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopTableEditor

rebuildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPlotDisplayComponent

rebuildRibbon() - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon

rebuildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.core.viewers.JIPipeDataTableDataViewer

rebuildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.filesystem.desktop.PathDataViewer

rebuildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ImagePlusDataViewer

rebuildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ResultsTableDataViewer

rebuildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.omero.viewers.OMERODataViewer

rebuildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.plots.viewers.JFreeChartPlotDataViewer

rebuildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.strings.StringDataViewer

rebuildRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.plugins.tables.display.TableColumnDataViewer

rebuildStatusBar(JToolBar) - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewer

Called after rebuildDock()

rebuildStatusBar(JToolBar) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ImagePlusDataViewer

rebuildTreeModel() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterKeyPickerUI

Recreates the tree model

rebuildUI() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow

Rebuilds the dock, ribbon, and status bar of the current data viewer

recalculateEdgeFeatureRange() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

recalculateMaskPreview() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

recalculateSpotFeatureRange() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotsCollectionData

recalculateTrackFeatureRanges() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

recheckValidity() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopReloadableValidityChecker

Revalidates the object

RectangleDeserializer - Class in org.hkijena.jipipe.plugins.parameters.library.roi

Deserializer for Color

RectangleDeserializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.RectangleDeserializer

RectangleDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.roi

Editor for a any numeric parameter

RectangleDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.RectangleDesktopParameterEditorUI

RectangleImageJ2ShapeData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.shapes

RectangleImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.RectangleImageJ2ShapeData

RectangleImageJ2ShapeData(RectangleShape) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.RectangleImageJ2ShapeData

RectangleImageJ2ShapeData(RectangleImageJ2ShapeData) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.RectangleImageJ2ShapeData

RectangleList - Class in org.hkijena.jipipe.plugins.parameters.library.roi

List parameter of Rectangle

RectangleList() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.RectangleList

Creates a new instance

RectangleList(RectangleList) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.RectangleList

Creates a copy

RectangleMaskDrawer2DTool - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer

Rectangle drawing Allows left-click canvas dragging

RectangleMaskDrawer2DTool(MaskDrawerPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.RectangleMaskDrawer2DTool

RectangleSerializer - Class in org.hkijena.jipipe.plugins.parameters.library.roi

Serializer for Rectangle

RectangleSerializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.roi.RectangleSerializer

rectBackward - Variable in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPane

rectForward - Variable in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPane

redirectDragEvents(Component, Component) - Static method in class org.hkijena.jipipe.utils.UIUtils

redo(UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Redo the last undo operation

redrawPlot() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPlotDisplayComponent

Redraws the plot

REFERENCE_INPUT_SLOT - Static variable in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.SkeletonToSimplifiedFilamentsFijiAlgorithm

REFERENCE_INPUT_SLOT - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm

ReferencedAppendRectangularRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate

Deprecated.

ReferencedAppendRectangularRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.ReferencedAppendRectangularRoiAlgorithm

Deprecated.

Instantiates a new node type.

ReferencedAppendRectangularRoiAlgorithm(ReferencedAppendRectangularRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.ReferencedAppendRectangularRoiAlgorithm

Deprecated.

Instantiates a new node type.

ReferencedDefineRectangularRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate

Deprecated.

ReferencedDefineRectangularRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.ReferencedDefineRectangularRoiAlgorithm

Deprecated.

Instantiates a new node type.

ReferencedDefineRectangularRoiAlgorithm(ReferencedDefineRectangularRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.ReferencedDefineRectangularRoiAlgorithm

Deprecated.

Instantiates a new node type.

reflectionAccess(JIPipeParameterCollection, Method, Method) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

Sets up access via reflection The field class is extracted from the getter return type

ReflectionUtils - Class in org.hkijena.jipipe.utils

Utilities around reflection

refreshContent(boolean, Object) - Method in class org.hkijena.jipipe.desktop.app.parameterreference.JIPipeDesktopGraphNodeParameterReferenceGroupCollectionEditorUI

refreshDataInfoList() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker

Refreshes the list

refreshForm() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

Recreates the UI elements.

refreshFormPanel() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

refreshImageInfo() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

refreshNodeInfoList() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker

Refreshes the list

refreshSlice() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

refreshTable() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopAlgorithmCacheBrowserUI

refreshTable() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotPreview

Rebuilds the table to show the updated preview

refreshTables() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.properties.JIPipeDesktopCompartmentGraphEditorResultsPanel

refreshTree() - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchTree

Rebuilds the tree

refreshTree() - Method in class org.hkijena.jipipe.desktop.app.cache.cachetree.JIPipeDesktopCacheTreePanel

Rebuilds the tree

refreshUUIDCache() - Method in class org.hkijena.jipipe.api.project.JIPipeProjectRunSetsConfiguration

RegexStringPredicateFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

RegexStringPredicateFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.RegexStringPredicateFunction

RegionalMaxima2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

RegionalMaxima2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMaxima2DAlgorithm

Instantiates a new node type.

RegionalMaxima2DAlgorithm(RegionalMaxima2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMaxima2DAlgorithm

Instantiates a new node type.

RegionalMaxima3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

RegionalMaxima3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMaxima3DAlgorithm

Instantiates a new node type.

RegionalMaxima3DAlgorithm(RegionalMaxima3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMaxima3DAlgorithm

Instantiates a new node type.

RegionalMinima2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

RegionalMinima2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMinima2DAlgorithm

Instantiates a new node type.

RegionalMinima2DAlgorithm(RegionalMinima2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMinima2DAlgorithm

Instantiates a new node type.

RegionalMinima3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

RegionalMinima3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMinima3DAlgorithm

Instantiates a new node type.

RegionalMinima3DAlgorithm(RegionalMinima3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMinima3DAlgorithm

Instantiates a new node type.

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compartments.JIPipeCompartmentsPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.grouping.GroupingPlugin

register() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeRegistrationTask

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.looping.LoopingPlugin

register(JIPipeApplicationSettingsSheet) - Method in class org.hkijena.jipipe.api.registries.JIPipeApplicationSettingsRegistry

Registers a new settings sheet

register(String, Class<? extends JIPipeData>, JIPipeDependency) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Registers a data type

register(Class<? extends JIPipeGraphEditorTool>) - Method in class org.hkijena.jipipe.api.registries.JIPipeGraphEditorToolRegistry

register(String, ImageJDataImporter, Class<? extends ImageJDataImporterUI>) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry

Registers an importer

register(String, ImageJDataExporter, Class<? extends ImageJDataExporterUI>) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry

Registers an importer

register() - Method in class org.hkijena.jipipe.api.registries.JIPipeJavaNodeRegistrationTask

register(Class<? extends JIPipeMetadataObject>, String, String...) - Method in class org.hkijena.jipipe.api.registries.JIPipeMetadataRegistry

register() - Method in interface org.hkijena.jipipe.api.registries.JIPipeNodeRegistrationTask

Runs the registration

register(JIPipeNodeInfo, JIPipeDependency) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Registers an algorithm info

register(JIPipeParameterTypeInfo) - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry

Registers a new parameter type

register(Class<? extends JIPipeProjectSettingsSheet>) - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectSettingsRegistry

Registers a new settings sheet

register(JIPipeProjectTemplate) - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry

register(Path) - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry

register(Class<?>, Class<?>) - Method in class org.hkijena.jipipe.api.registries.JIPipeUtilityRegistry

Registers a new utility associated to the category

register(JIPipeJsonPlugin, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.JIPipe

Registers a JSON extension

register(JIPipe, Context, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.JIPipeJavaPlugin

Registers custom modules into JIPipe

register() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

Registers the content.

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.AnnotationsPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.artifacts.ArtifactsPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.batchassistant.BatchAssistantPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.core.CorePlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.dataenvironment.DataDirectoriesPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.dev.DevelopmentPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.FilesystemPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.forms.FormsPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.graphannotation.GraphAnnotationPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.IJ3DPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijocr.OCRPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.TrackMatePlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijweka.WekaPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ilastik.IlastikPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2Plugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.ImageJAlgorithmsPlugin

register(ImagePlus, ImagePlus, ImagePlus, ImagePlus, CoordinateTransform, Rectangle, List<Rectangle>, SimpleImageRegistrationParameters, SIFTParameters, Param, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.SimpleRegistrationUtils

Register two images with corresponding masks and following the features and registration models.

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imp.ImpPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionLoaderPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.multiparameters.MultiParameterAlgorithmsPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.multiparameters.MultiParametersPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.napari.NapariPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.nodetemplate.NodeTemplateBoxToolPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.OMEROPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.opencv.OpenCvPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.parameters.StandardParametersPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.pipelinerender.PipelineRenderPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.plots.PlotsPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.processes.ProcessesPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.python.CorePythonPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.python.PythonPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.r.RPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.scene3d.Scene3DPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.settings.StandardSettingsPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.StringsPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.TablesPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tools.ToolsPlugin

register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.UtilitiesPlugin

registerAlternativeIds(Class<? extends JIPipeMetadataObject>, String...) - Method in class org.hkijena.jipipe.api.registries.JIPipeMetadataRegistry

registerAnnotationNodeType(String, Class<T>, Class<? extends JIPipeAnnotationGraphNodeTool<T>>, URL) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a new annotation node type and associated JIPipeGraphEditorTool

registerApplicationSettingsSheet(JIPipeApplicationSettingsSheet) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a new application settings sheet

registerBalloon(BalloonTip) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

registerCategory(JIPipeNodeTypeCategory) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Registers a category

registerColumnOperation(String, ColumnOperation, String, String, String) - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry

Registers a new operation.

registerContextMenuAction(NodeUIContextAction) - Method in class org.hkijena.jipipe.desktop.api.registries.JIPipeCustomMenuRegistry

Registers a new context menu action.

registerContextMenuAction(NodeUIContextAction) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a custom context menu action

registerConversion(JIPipeDataConverter) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Registers a data converter that allows implicit conversion between data types

registerDatatype(String, Class<? extends JIPipeData>, URL, Class<? extends JIPipeDesktopResultDataSlotRowUI>, Class<? extends JIPipeDesktopResultDataSlotPreview>, JIPipeLegacyDataOperation...) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a new data type

registerDatatype(String, Class<? extends JIPipeData>, URL, JIPipeLegacyDataOperation...) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a new data type

registerDatatypeConversion(JIPipeDataConverter) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a non-trivial conversion between data types.

registerDatatypeDisplayOperation(String, JIPipeDesktopDataDisplayOperation) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers an additional non-default display operation for the data type.

registerDatatypeImportOperation(String, JIPipeLegacyDataImportOperation) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers an import operation for the data type.

registerDatatypeOperation(String, JIPipeLegacyDataOperation...) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Shortcut for registering import and display operations.

registerDefaultDataTypeViewer(Class<? extends JIPipeData>, Class<? extends JIPipeDesktopDataViewer>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a default data viewer for the provided data class Overrides any existing data viewer

registerDefaultDataViewer(Class<? extends JIPipeData>, Class<? extends JIPipeDesktopDataViewer>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Registers a default data viewer class

registerDefaultPlugin(Class<? extends JIPipeDesktopLegacyImageViewerPlugin>) - Static method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

registerDisplayOperation(String, JIPipeDesktopDataDisplayOperation) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Registers an operation that will be available to users in the cache view

registerEdgeFeatures(JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackMateUtils

registerEnumParameterType(String, Class<? extends Enum<?>>, String, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers an Enum as parameter

registerEnvironment(Class<? extends JIPipeEnvironment>, JIPipeExternalEnvironmentSettings) - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry

Registers an environment and its corresponding settings

registerEnvironment(Class<T>, Class<U>, JIPipeExternalEnvironmentSettings, String, String, String, Icon) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a new environment type.

registerEnvironmentInstaller(Class<? extends JIPipeEnvironment>, Class<? extends JIPipeExternalEnvironmentInstaller>, Icon) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers an installer for a given environment

registerExample(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Registers a node template as example Will reject if the template does not contain exactly one node

registerExpressionFunction(ExpressionFunction, String, String) - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry

Registers an new function that will be usable within expressions.

registerExpressionFunction(ExpressionFunction, String, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a function that can be used within expressions.

registerExpressionFunction(ExpressionFunction) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a function that can be used within expressions.

registerFileChooserKnownDirectoryType(String, Icon, String, String...) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers directory type metadata for the file chooser.

registerFileChooserKnownDirectoryType(String, String, String, String...) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers directory type metadata for the file chooser.

registerFileChooserKnownFileType(String, Icon, String, String...) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers file type metadata for the file chooser.

registerFileChooserKnownFileType(String, String, String, String...) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers file type metadata for the file chooser.

registerGenerator(Class<?>, JIPipeParameterGenerator) - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry

Registers a UI that can generate parameters

registerGraphEditorTool(Class<? extends JIPipeGraphEditorTool>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

registerGraphEditorToolBarButton(Class<? extends JIPipeDesktopGraphEditorToolBarButtonExtension>) - Method in class org.hkijena.jipipe.desktop.api.registries.JIPipeCustomMenuRegistry

Registers a new button for the graph editor.

registerGraphEditorToolBarButtonExtension(Class<? extends JIPipeDesktopGraphEditorToolBarButtonExtension>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a custom button for the graph editor toolbar

registerHyperlinkHandler(JTextPane) - Static method in class org.hkijena.jipipe.utils.UIUtils

registerIcon(Class<? extends JIPipeData>, URL) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Registers a custom icon for a datatype

registerIcon(JIPipeNodeInfo, URL) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Registers a custom icon for a node

registerImageJDataExporter(String, ImageJDataExporter, Class<? extends ImageJDataExporterUI>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers an importer for data from ImageJ

registerImageJDataImporter(String, ImageJDataImporter, Class<? extends ImageJDataImporterUI>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers an importer for data from ImageJ

registerImportOperation(String, JIPipeLegacyDataImportOperation) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Registers an operation that will be available to users in the results view (after runs).

registerInstaller(Class<? extends JIPipeEnvironment>, Class<? extends JIPipeExternalEnvironmentInstaller>, Icon) - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry

Registers an installer

registerJsonExtensionFromFile(Path) - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionLoaderPlugin

Schedules a registration task for the file path

registerJsonExtensionFromResource(String) - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionLoaderPlugin

Schedules a registration task for a resource path

registerKnownDirectoryType(String, Icon, String, String...) - Static method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNext

Registers a new path type

registerKnownFileType(String, Icon, String, String...) - Static method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNext

Registers a new path type

registerKnownPlugin(JIPipePlugin) - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

Registers an extension as known to the extension registry.

registerMenu(Class<? extends JIPipeDesktopMenuExtension>) - Method in class org.hkijena.jipipe.desktop.api.registries.JIPipeCustomMenuRegistry

Registers a new extension

registerMenuExtension(Class<? extends JIPipeDesktopMenuExtension>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a custom menu entry.

registerMetadataObjectType(Class<? extends JIPipeMetadataObject>, String, String...) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a new metadata object type, which are JSON-serializable objects with a defined type identifier string

registerNodeExample(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a node template as example for a node.

registerNodeExample(Class<T>, String, Consumer<T>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a node as node example based on a node instance The configurator function is run prior to the registration Must be run within postprocess()

registerNodeExample(JIPipeGraphNode) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a node example based on the node instance The name of the example is taken from the node custom name Must be run within postprocess()

registerNodeExamplesFromResources(JIPipeResourceManager, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers node examples from plugin resources via a JIPipeResourceManager.

registerNodeExamplesFromResources(Class<?>, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers node examples from plugin resources.

registerNodeTemplate(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a node template

registerNodeTemplatesFromResources(JIPipeResourceManager, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers node templates from plugin resources via a JIPipeResourceManager.

registerNodeTemplatesFromResources(Class<?>, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers node examples from plugin resources.

registerNodeType(String, Class<? extends JIPipeGraphNode>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a new node type.

registerNodeType(String, Class<? extends JIPipeGraphNode>, URL) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a new node type.

registerNodeType(JIPipeNodeInfo) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a new node type.

registerNodeType(JIPipeNodeInfo, URL) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a new node type.

registerNodeType(JIPipeNodeRegistrationTask) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a new node type with additional dependencies.

registerNodeTypeCategory(JIPipeNodeTypeCategory) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a node type category

registerParameterEditor(Class<?>, Class<? extends JIPipeDesktopParameterEditorUI>) - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry

Registers a new parameter type

registerParameterEditor(Class<?>, Class<? extends JIPipeDesktopParameterEditorUI>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers an editor for any parameter type that inherits from the provided parameter class.

registerParameterGenerator(Class<?>, JIPipeParameterGenerator) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a UI that can generate parameters

registerParameterType(String, Class<?>, Supplier<Object>, Function<Object, Object>, String, String, Class<? extends JIPipeDesktopParameterEditorUI>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a new parameter type and respective editors

registerParameterType(String, Class<?>, String, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a new parameter type that already has an existing editor.

registerParameterType(String, Class<?>, String, String, Class<? extends JIPipeDesktopParameterEditorUI>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a new parameter type.

registerParameterType(String, Class<T>, Class<? extends ListParameter<T>>, Supplier<Object>, Function<Object, Object>, String, String, Class<? extends JIPipeDesktopParameterEditorUI>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a new parameter type and respective editors

registerParameterType(JIPipeParameterTypeInfo, Class<? extends JIPipeDesktopParameterEditorUI>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a new parameter type and respective editor

registerParameterType(JIPipeParameterTypeInfo, Class<?>, Class<? extends JIPipeDesktopParameterEditorUI>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a new parameter type and respective editor

registerPlugins(Collection<Class<? extends JIPipeDesktopLegacyImageViewerPlugin>>) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

registerProjectSettingsSheet(Class<? extends JIPipeProjectSettingsSheet>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a new project settings sheet

registerProjectTemplatesFromResources(JIPipeResourceManager, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers project templates from plugin resources via a JIPipeResourceManager.

registerProjectTemplatesFromResources(Class<?>, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers project templates from plugin resources Will detect *.jip files and attempt to load them (fails silently)

registerResultSlotUI(Class<? extends JIPipeData>, Class<? extends JIPipeDesktopResultDataSlotRowUI>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Registers a custom UI for a result data slot

registerResultTableCellUI(Class<? extends JIPipeData>, Class<? extends JIPipeDesktopResultDataSlotPreview>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry

Registers a custom renderer for the data displayed in the dataslot result table

RegisterRoiToImageByBrightnessAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.register

RegisterRoiToImageByBrightnessAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.register.RegisterRoiToImageByBrightnessAlgorithm

RegisterRoiToImageByBrightnessAlgorithm(RegisterRoiToImageByBrightnessAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.register.RegisterRoiToImageByBrightnessAlgorithm

registerSingletonTab(String, String, Icon, Supplier<Component>, JIPipeDesktopTabPane.SingletonTabMode) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Adds a tab that can be silently closed and brought up again

registerSingletonTab(String, String, Icon, Supplier<Component>, JIPipeDesktopTabPane.CloseMode, JIPipeDesktopTabPane.SingletonTabMode) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Adds a tab that can be silently closed and brought up again

registerSpotDetectors(TrackMatePlugin, JIPipeProgressInfo, PluginService) - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackMateUtils

registerSpotFeatures(JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackMateUtils

registerSpotTrackers(TrackMatePlugin, JIPipeProgressInfo, PluginService) - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackMateUtils

registerSubParameter(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection

Registers a sub-parameter instance to pass ParameterStructureChangedEvent via this algorithm's events

registerSubParameters(JIPipeParameterCollection...) - Method in class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection

Registers a sub-parameter instance to pass ParameterStructureChangedEvent via this algorithm's events

registerTableColumnOperation(String, ColumnOperation, String, String, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a table column operation.

registerTableColumnOperationAndExpressionFunction(String, ColumnOperation, String, String, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers a table column operation.

registerTemplate(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Registers a node template as example Will reject

registerTrackFeatures(JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackMateUtils

registerUtility(Class<?>, Class<?>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

Registers an arbitrary utility associated to a category class.

RelabeledTableColumnData - Class in org.hkijena.jipipe.plugins.tables.datatypes

RelabeledTableColumnData(TableColumnData, String) - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.RelabeledTableColumnData

relativeJIPipeUserDirToAbsolute(Path) - Static method in class org.hkijena.jipipe.utils.PathUtils

Converts relative paths to absolute paths, relative to the ImageJ directory Absolute paths are left unchanged

relativeToAbsolute(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeDataStorage

Converts a path relative to this storage into a path that is relative to the root storage.

relativeToAbsoluteResourcePath(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager

Converts a relative resource path to an absolute resource path

RelativizeByParameter - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Applies subfolder navigation to each input folder

RelativizeByParameter(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.RelativizeByParameter

RelativizeByParameter(RelativizeByParameter) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.RelativizeByParameter

Copies the algorithm

RelativizePaths - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Applies subfolder navigation to each input folder

RelativizePaths(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.RelativizePaths

RelativizePaths(RelativizePaths) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.RelativizePaths

Copies the algorithm

releaseLock() - Method in class org.hkijena.jipipe.utils.FileLocker

reload() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollectionDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContentsDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.api.registries.JIPipeApplicationSettingsRegistry

Reloads the settings from the default file if it exists

reload() - Method in class org.hkijena.jipipe.api.registries.JIPipeRecentProjectsRegistry

reload() - Method in class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

Reloads the value from the stored parameter

reload() - Method in class org.hkijena.jipipe.plugins.expressions.ui.JIPipeExpressionDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.WekaClassifierDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.imagej2.io.DefaultImageJ2JIPipeModuleIOService

reload() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OMEAccessorDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.nodetemplate.JIPipeNodeTemplateDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicEnumDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.EnumDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2DDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.auth.PasswordDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.collections.DesktopParameterCollectionListEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.colors.ColorDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.editors.JIPipeParameterCollectionVisibilitiesDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.filesystem.FileDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.filesystem.FilePathDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.graph.GraphNodeReferenceParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.images.ImageDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeAuthorMetadataDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeDesktopArtifactQueryParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeDesktopExternalEnvironmentParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeParameterCollectionDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLTextDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtractionDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.BooleanDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.NumberDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRangeDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.StringDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.StringOrDoubleDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.VectorDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.quantities.QuantityDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.IconRefDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExporterRefDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRefDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImporterRefDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRefDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRefDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeNodeInfoRefDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeParameterTypeInfoRefDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.AnchorDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMarginEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.InnerMarginEditorUIDesktop

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.MarginDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.RectangleDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.scripts.LargeScriptDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.parameters.library.table.DesktopParameterTableEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.plots.parameters.UIPlotDataSeriesColumnEnumDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnGeneratorDesktopParameterEditorUI

reload() - Method in class org.hkijena.jipipe.plugins.tables.parameters.ResultsTableDataDesktopParameterEditorUI

reloadDisplayedData() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

reloadEntries() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JIPipePlotSeriesListEditorUI

Reloads entries in this panel

reloadForm() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

Reloads the form.

reloadGlobalTemplates(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

reloadList() - Method in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopCompendiumUI

reloadList() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.properties.JIPipeDesktopGraphNodeSlotEditorUI

Reloads the list

reloadList() - Method in class org.hkijena.jipipe.desktop.app.history.JIPipeDesktopHistoryJournalUI

reloadList() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotAvailableDataManagerUI

Reloads the list of data sources

ReloadListRun(JIPipeDesktopAddNodesPanel) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.ReloadListRun

ReloadListRun(JIPipeDesktopLegacyAddNodePanel) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopLegacyAddNodePanel.ReloadListRun

ReloadListRun(JIPipeDesktopNodeFinderDialogUI) - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.nodefinder.JIPipeDesktopNodeFinderDialogUI.ReloadListRun

RemapLabelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

RemapLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.RemapLabelsAlgorithm

RemapLabelsAlgorithm(RemapLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.RemapLabelsAlgorithm

remove(Object) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

remove(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

remove(JIPipeProjectRunSet) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectRunSetsConfiguration

remove(int) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration

remove(Object) - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

remove(int) - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

removeActionListener(ActionListener) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPathEditorComponent

removeActionListener(ActionListener) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopToggleButtonPanel

removeAdaptiveParameter(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

removeAlgorithm(JsonNodeInfo) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

Removes an algorithm

removeAll(Collection<?>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

removeAll(Collection<Path>) - Method in class org.hkijena.jipipe.api.registries.JIPipeRecentProjectsRegistry

removeAll(Collection<?>) - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

removeAllAnnotationsFromData(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Removes an annotation column from the data

removeAllPanels() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

removeAllWithDispose(JComponent) - Static method in class org.hkijena.jipipe.utils.UIUtils

RemoveAnnotationAlgorithm - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Removes a specified annotation

RemoveAnnotationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveAnnotationAlgorithm

RemoveAnnotationAlgorithm(RemoveAnnotationAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveAnnotationAlgorithm

Copies the algorithm

RemoveArrayAnnotationsAlgorithm - Class in org.hkijena.jipipe.plugins.annotation.algorithms

RemoveArrayAnnotationsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveArrayAnnotationsAlgorithm

RemoveArrayAnnotationsAlgorithm(RemoveArrayAnnotationsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveArrayAnnotationsAlgorithm

removeAttachment(Class<?>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Removes an attachment Warning: Attachments are not serialized

RemoveBookmarkNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

RemoveBookmarkNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RemoveBookmarkNodeUIContextAction

RemoveBorderFilaments - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.filter

RemoveBorderFilaments(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.RemoveBorderFilaments

RemoveBorderFilaments(RemoveBorderFilaments) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.RemoveBorderFilaments

RemoveBorderLabelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter

RemoveBorderLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.RemoveBorderLabelsAlgorithm

RemoveBorderLabelsAlgorithm(RemoveBorderLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.RemoveBorderLabelsAlgorithm

RemoveBorderRoi3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process

RemoveBorderRoi3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm

RemoveBorderRoi3DAlgorithm(RemoveBorderRoi3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm

RemoveBorderRoisAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter

Wrapper around RoiManager

RemoveBorderRoisAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.RemoveBorderRoisAlgorithm

Instantiates a new node type.

RemoveBorderRoisAlgorithm(RemoveBorderRoisAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.RemoveBorderRoisAlgorithm

Instantiates a new node type.

removeColumn(int) - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

Removes a column

removeColumn(int) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

Removes the specified column

removeColumn(String) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Removes a column with given name

RemoveColumnAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.columns

Algorithm that removes columns

RemoveColumnAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.RemoveColumnAlgorithm

Creates a new instance

RemoveColumnAlgorithm(RemoveColumnAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.RemoveColumnAlgorithm

Creates a copy

removeColumnAt(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Removes the column with the specified index

removeColumns(Collection<String>) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Removes the columns with given headings

removeCompartment(UUID) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Removes a whole compartment from the graph.

removeCompartment(JIPipeProjectCompartment) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Removes a compartment

removeComponentsAtBorder(ImagePlus, boolean, boolean, boolean, boolean, double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

removeContent(GraphNodeParameterReference) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup

Adds a new element into the group

removeData(List<TableColumnData>) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

Removes the data

RemoveDataAnnotations - Class in org.hkijena.jipipe.plugins.annotation.algorithms

RemoveDataAnnotations(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveDataAnnotations

RemoveDataAnnotations(RemoveDataAnnotations) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveDataAnnotations

removeDockPanel(String) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

removeDockPanelsIf(Predicate<JIPipeDesktopDockPanel.Panel>) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

removeDuplicateDelimiters(String, String) - Static method in class org.hkijena.jipipe.utils.StringUtils

RemoveDuplicatesFunction - Class in org.hkijena.jipipe.plugins.expressions.functions

RemoveDuplicatesFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.RemoveDuplicatesFunction

removeDuplicateVertices(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

RemoveDuplicateVerticesAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.process

RemoveDuplicateVerticesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.RemoveDuplicateVerticesAlgorithm

RemoveDuplicateVerticesAlgorithm(RemoveDuplicateVerticesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.RemoveDuplicateVerticesAlgorithm

removeFromGlobal(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

removeFromProject(JIPipeNodeTemplate, JIPipeProject) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeTemplateRegistry

removeFromSelection(JIPipeDesktopGraphNodeUI) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

Removes an algorithm from the selection

removeFromSelection(JIPipeDesktopGraphNodeUI) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Removes an algorithm from the selection

removeGroup(GraphNodeParameterReferenceGroup) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection

Removes the group

removeHighlightedComponents(Set<Component>) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.FormPanelContentPanel

removeHTMLRoot(String) - Static method in class org.hkijena.jipipe.utils.StringUtils

Removes the HTML root from HTML

RemoveImageMetadataAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata

RemoveImageMetadataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata.RemoveImageMetadataAlgorithm

RemoveImageMetadataAlgorithm(RemoveImageMetadataAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata.RemoveImageMetadataAlgorithm

removeInputSlot(String, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Removes the slot with given name

removeInputSlot(String, boolean) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

removeInputSlot(String, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeIOSlotConfiguration

removeInputToNodeEdge(JIPipeAlgorithm, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph

removeLabelsExcept(ImageProcessor, int[]) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageJAlgorithmUtils

RemoveLargestLabelAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter

RemoveLargestLabelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.RemoveLargestLabelAlgorithm

RemoveLargestLabelAlgorithm(RemoveLargestLabelAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.RemoveLargestLabelAlgorithm

RemoveLargestRegionAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary

RemoveLargestRegionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.RemoveLargestRegionAlgorithm

Instantiates a new node type.

RemoveLargestRegionAlgorithm(RemoveLargestRegionAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.RemoveLargestRegionAlgorithm

Instantiates a new node type.

removeLastRow() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Removes the last row.

removeLUT(ImagePlus, Set<Integer>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

RemoveLUTAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut

RemoveLUTAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.RemoveLUTAlgorithm

RemoveLUTAlgorithm(RemoveLUTAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.RemoveLUTAlgorithm

removeMergedDataAnnotation(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Removes a data annotation

removeMergedTextAnnotation(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Removes an annotation of provided type

removeMergedTextAnnotation(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Removes an annotation of provided type

removeMessage(JIPipeDesktopMessagePanel.Message) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMessagePanel

RemoveNAAnnotationColumnsAlgorithm - Class in org.hkijena.jipipe.plugins.annotation.algorithms

RemoveNAAnnotationColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveNAAnnotationColumnsAlgorithm

RemoveNAAnnotationColumnsAlgorithm(RemoveNAAnnotationColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveNAAnnotationColumnsAlgorithm

RemoveNaNColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Sets NaN values to zero

RemoveNaNColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.RemoveNaNColumnOperation

RemoveNaNFilter2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Wrapper around RankFilters

RemoveNaNFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.RemoveNaNFilter2DAlgorithm

Instantiates a new node type.

RemoveNaNFilter2DAlgorithm(RemoveNaNFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.RemoveNaNFilter2DAlgorithm

Instantiates a new node type.

removeNode(JIPipeGraphNode, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Removes an algorithm.

removeNodes(Set<JIPipeGraphNode>, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Removes multiple nodes at once

removeNodes(Set<JIPipeGraphNode>, JIPipeProjectRunSetsConfiguration) - Method in class org.hkijena.jipipe.api.run.JIPipeProjectRunSet

removeNodeToOutputEdge(JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph

RemoveOutliersFilter2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise

Wrapper around RankFilters

RemoveOutliersFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm

Instantiates a new node type.

RemoveOutliersFilter2DAlgorithm(RemoveOutliersFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm

Instantiates a new node type.

RemoveOutliersFilter2DAlgorithm.Mode - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise

The two different modes of this filter

removeOutputSlot(String, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Removes the slot with given name

removeOutputSlot(String, boolean) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration

removeOutputSlot(String, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeIOSlotConfiguration

removeOutputToInputEdge(JIPipeDataSlot, JIPipeInputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph

Removes a connection from the targeted output slot to the input, which will free up the output slot at some point

removeOverlay(JIPipeData) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

removeOverlay(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

RemoveOverlay3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.overlay

RemoveOverlay3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.overlay.RemoveOverlay3DAlgorithm

RemoveOverlay3DAlgorithm(RemoveOverlay3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.overlay.RemoveOverlay3DAlgorithm

RemoveOverlayAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay

RemoveOverlayAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RemoveOverlayAlgorithm

RemoveOverlayAlgorithm(RemoveOverlayAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RemoveOverlayAlgorithm

removeOverlaysOfType(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

removeParameter(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Removes a parameter

removeParameterByKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Removes a parameter by key

RemoveROI3DMetadataAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata

RemoveROI3DMetadataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.RemoveROI3DMetadataAlgorithm

RemoveROI3DMetadataAlgorithm(RemoveROI3DMetadataAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.RemoveROI3DMetadataAlgorithm

RemoveROIMetadataAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties

RemoveROIMetadataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.RemoveROIMetadataAlgorithm

RemoveROIMetadataAlgorithm(RemoveROIMetadataAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.RemoveROIMetadataAlgorithm

removeRow(int) - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

Removes a row

removeRow(int) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

Removes the row with the specified index

removeRow(int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

removeRows(Collection<Integer>) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

removeSelectedROIs() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

removeSelectedROIs(boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

removeSelectedSpots(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

removeSelectedSpots(boolean) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

removeSelectedTracks(boolean) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

removeSelectionContextPanel(ROIManagerPlugin3DSelectionContextPanel) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

removeSelectionContextPanel(FilamentsManagerPlugin2D.SelectionContextPanel) - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D

removeSelectionContextPanel(SpotsManagerPlugin2D.SelectionContextPanel) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

removeSelectionContextPanel(TracksManagerPlugin2D.SelectionContextPanel) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

removeSelectionContextPanel(ROIManagerPlugin2DSelectionContextPanel) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

removeSelfEdges() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

removeSeries(JIPipeDesktopPlotSeriesEditor) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

Removes a series from the series builder

removeSeries(JFreeChartPlotDataSeries) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

Removes a series

removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableInfo

removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantTableModel

removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableModel

removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableModel

removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerTableModel

removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextTableModel

removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

removeUpdate(DocumentEvent) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopDocumentChangeListener

removeUser(Object) - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore

Un-marks the provided objects as user of this data

removeVertexIf(Predicate<FilamentVertex>) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

RemoveVertexValueBackupsAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

RemoveVertexValueBackupsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.RemoveVertexValueBackupsAlgorithm

RemoveVertexValueBackupsAlgorithm(RemoveVertexValueBackupsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.RemoveVertexValueBackupsAlgorithm

RenameAnnotation - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Generates annotations from filenames

RenameAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.RenameAnnotation

New instance

RenameAnnotation(RenameAnnotation) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.RenameAnnotation

Copies the algorithm

RenameByString - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Applies subfolder navigation to each input folder

RenameByString(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.RenameByString

RenameByString(RenameByString) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.RenameByString

Copies the algorithm

renameColumn(String, String) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Renames a column

RenameDataAnnotation - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Generates annotations from filenames

RenameDataAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.RenameDataAnnotation

New instance

RenameDataAnnotation(RenameDataAnnotation) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.RenameDataAnnotation

Copies the algorithm

renamedCopy(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

RenameSingleColumnsAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.columns

Algorithm that removes columns

RenameSingleColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameSingleColumnsAlgorithm

Creates a new instance

RenameSingleColumnsAlgorithm(RenameSingleColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameSingleColumnsAlgorithm

Creates a copy

RenameTableColumns2Algorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.columns

Algorithm that removes columns

RenameTableColumns2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumns2Algorithm

Creates a new instance

RenameTableColumns2Algorithm(RenameTableColumns2Algorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumns2Algorithm

Creates a copy

RenameTableColumns2Algorithm.RenamingEntry - Class in org.hkijena.jipipe.plugins.tables.nodes.columns

RenameTableColumnsAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.columns

Deprecated.

RenameTableColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumnsAlgorithm

Deprecated.

Creates a new instance

RenameTableColumnsAlgorithm(RenameTableColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumnsAlgorithm

Deprecated.

Creates a copy

RenameTableColumnsToAnnotationAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.columns

Algorithm that removes columns

RenameTableColumnsToAnnotationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm

Creates a new instance

RenameTableColumnsToAnnotationAlgorithm(RenameTableColumnsToAnnotationAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm

Creates a copy

RenamingEntry() - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumns2Algorithm.RenamingEntry

RenamingEntry(RenameTableColumns2Algorithm.RenamingEntry) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumns2Algorithm.RenamingEntry

render() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo.StatusUpdatedEvent

renderDetailedName() - Method in class org.hkijena.jipipe.api.validation.contexts.GraphNodeValidationReportContext

renderDetailedName() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportContext

RenderedItem(Icon, String) - Constructor for class org.hkijena.jipipe.desktop.commons.components.renderers.JIPipeDesktopGenericListCellRenderer.RenderedItem

Renderer() - Constructor for class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerTextAnnotationsPanel.Renderer

Creates a new renderer

Renderer() - Constructor for class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataViewerAnnotationInfoPanel.Renderer

Creates a new renderer

Renderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterAccessTreeUI.Renderer

Creates a new instance

Renderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.Renderer

Creates a new renderer

Renderer() - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.Renderer

Creates a new renderer

Renderer(DynamicEnumParameter<Object>) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicEnumDesktopParameterEditorUI.Renderer

Renderer(EnumItemInfo) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.enums.EnumDesktopParameterEditorUI.Renderer

renderGradient(List<ColorUtils.GradientStop>, int) - Static method in class org.hkijena.jipipe.utils.ColorUtils

renderIcon() - Method in class org.hkijena.jipipe.api.validation.contexts.APIErrorValidationReportContext

renderIcon() - Method in class org.hkijena.jipipe.api.validation.contexts.CustomValidationReportContext

renderIcon() - Method in class org.hkijena.jipipe.api.validation.contexts.GraphNodeValidationReportContext

renderIcon() - Method in class org.hkijena.jipipe.api.validation.contexts.GraphValidationReportContext

renderIcon() - Method in class org.hkijena.jipipe.api.validation.contexts.InternalErrorValidationReportContext

renderIcon() - Method in class org.hkijena.jipipe.api.validation.contexts.JavaExtensionValidationReportContext

renderIcon() - Method in class org.hkijena.jipipe.api.validation.contexts.JsonNodeInfoValidationReportContext

renderIcon() - Method in class org.hkijena.jipipe.api.validation.contexts.ParameterValidationReportContext

renderIcon() - Method in class org.hkijena.jipipe.api.validation.contexts.UnspecifiedValidationReportContext

renderIcon() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportContext

renderIcon(T) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicEnumParameter

Function that renders the icon.

renderIcon(T) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetParameter

Function that renders the icon.

renderIcon(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicCategoryEnumParameter

renderIcon(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter

renderIcon(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter

renderIcon(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.FontFamilyParameter

renderIcon(String) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectDefaultsApplicationSettings.ProjectTemplateEnum

renderIcon(Object) - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnConversionParameter

renderIcon(Object) - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnIntegrationParameter

RenderImageToRGBAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

RenderImageToRGBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.RenderImageToRGBAlgorithm

RenderImageToRGBAlgorithm(RenderImageToRGBAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.RenderImageToRGBAlgorithm

renderInputName() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter

renderInputName() - Method in class org.hkijena.jipipe.plugins.tables.parameters.processors.ConvertingTableColumnProcessorParameter

renderInputName() - Method in class org.hkijena.jipipe.plugins.tables.parameters.processors.ExpressionTableColumnProcessorParameter

renderInputName() - Method in class org.hkijena.jipipe.plugins.tables.parameters.processors.IntegratingTableColumnProcessorParameter

renderInputSlots() - Method in class org.hkijena.jipipe.api.grouping.GraphWrapperAlgorithmInput

renderInputSlots() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Controls whether to render input slots.

RenderJIPipeProjectAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc

RenderJIPipeProjectAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc.RenderJIPipeProjectAlgorithm

RenderJIPipeProjectAlgorithm(RenderJIPipeProjectAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc.RenderJIPipeProjectAlgorithm

renderLabel(String) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.EdgeFeature

renderLabel(String) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeature

renderLabel(String) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeature

renderLabel(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OMEAccessorTypeEnumParameter

renderLabel(Measurement) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.ImageStatisticsSetParameter

renderLabel(T) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicEnumParameter

Function that renders the label.

renderLabel(T) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetParameter

Function that renders the label.

renderLabel(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicCategoryEnumParameter

renderLabel(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter

renderLabel(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter

renderLabel(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.FontFamilyParameter

renderLabel(String) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectDefaultsApplicationSettings.ProjectTemplateEnum

renderLabel(Object) - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnConversionParameter

renderLabel(Object) - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnIntegrationParameter

renderName() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItemCollection

renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.APIErrorValidationReportContext

renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.CustomValidationReportContext

renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.GraphNodeSlotValidationReportContext

renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.GraphNodeValidationReportContext

renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.GraphValidationReportContext

renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.InternalErrorValidationReportContext

renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.JavaExtensionValidationReportContext

renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.JsonNodeInfoValidationReportContext

renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.ParameterValidationReportContext

renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.UnspecifiedValidationReportContext

renderName() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportContext

renderOutputName() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter

renderOutputName() - Method in class org.hkijena.jipipe.plugins.tables.parameters.processors.ConvertingTableColumnProcessorParameter

renderOutputName() - Method in class org.hkijena.jipipe.plugins.tables.parameters.processors.ExpressionTableColumnProcessorParameter

renderOutputName() - Method in class org.hkijena.jipipe.plugins.tables.parameters.processors.IntegratingTableColumnProcessorParameter

renderOutputSlots() - Method in class org.hkijena.jipipe.api.grouping.GraphWrapperAlgorithmOutput

renderOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Controls whether to render output slots.

RenderOverlay3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.overlay

Wrapper around RoiDrawer

RenderOverlay3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.overlay.RenderOverlay3DAlgorithm

Instantiates a new node type.

RenderOverlay3DAlgorithm(RenderOverlay3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.overlay.RenderOverlay3DAlgorithm

Instantiates a new node type.

RenderOverlayAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay

Wrapper around RoiDrawer

RenderOverlayAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

Instantiates a new node type.

RenderOverlayAlgorithm(RenderOverlayAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

Instantiates a new node type.

renderParameterName() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter

renderParameterName() - Method in class org.hkijena.jipipe.plugins.tables.parameters.processors.ConvertingTableColumnProcessorParameter

renderParameterName() - Method in class org.hkijena.jipipe.plugins.tables.parameters.processors.ExpressionTableColumnProcessorParameter

renderParameterName() - Method in class org.hkijena.jipipe.plugins.tables.parameters.processors.IntegratingTableColumnProcessorParameter

RenderPipelineRun - Class in org.hkijena.jipipe.plugins.pipelinerender

RenderPipelineRun(JIPipeProject, Path, RenderPipelineRunSettings) - Constructor for class org.hkijena.jipipe.plugins.pipelinerender.RenderPipelineRun

RenderPipelineRunSettings - Class in org.hkijena.jipipe.plugins.pipelinerender

RenderPipelineRunSettings() - Constructor for class org.hkijena.jipipe.plugins.pipelinerender.RenderPipelineRunSettings

RenderPipelineRunSettings(RenderPipelineRunSettings) - Constructor for class org.hkijena.jipipe.plugins.pipelinerender.RenderPipelineRunSettings

renderPreview() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataPreview

Renders the preview if it is not already rendered

renderPreview() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopAsyncResultDataSlotPreview

renderPreview() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopDefaultResultDataSlotPreview

renderPreview() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeDesktopResultDataSlotPreview

This function is called from outside to render the preview.

renderPreview() - Method in class org.hkijena.jipipe.plugins.filesystem.resultanalysis.FilesystemDataSlotPreview

renderToComponent(int, int) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeEmptyThumbnailData

renderToComponent(int, int) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData

renderToComponent(int, int) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData

renderToComponent(int, int) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData

renderToComponent(int, int) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData

renderToComponent(int, int) - Method in interface org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailData

Creates a Swing component that represents the thumbnail

renderTooltip(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OMEAccessorTypeEnumParameter

renderTooltip(T) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicEnumParameter

Function that renders the tooltip.

renderTooltip(T) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetParameter

Function that renders the tooltip.

renderTooltip(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter

renderTooltip(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter

renderTooltip(Object) - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnConversionParameter

renderTooltip(Object) - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnIntegrationParameter

renderToRGBWithLUTIfNeeded(ImagePlus, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Renders a non-RGB image to RGB, including LUT

REnvironment - Class in org.hkijena.jipipe.plugins.r

REnvironment() - Constructor for class org.hkijena.jipipe.plugins.r.REnvironment

REnvironment(REnvironment) - Constructor for class org.hkijena.jipipe.plugins.r.REnvironment

REnvironment.List - Class in org.hkijena.jipipe.plugins.r

A list of REnvironment

REnvironment.RArgumentsVariablesInfo - Class in org.hkijena.jipipe.plugins.r

REnvironmentAccessNode - Interface in org.hkijena.jipipe.plugins.r

Interface that should be used by nodes that access the OMERO credentials environments

ReorderDimensionsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

Algorithm that reorders Hyperstack dimensions

ReorderDimensionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm

ReorderDimensionsAlgorithm(ReorderDimensionsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm

ReorderHyperstackSlicesExpressionAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

ReorderHyperstackSlicesExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ReorderHyperstackSlicesExpressionAlgorithm

ReorderHyperstackSlicesExpressionAlgorithm(ReorderHyperstackSlicesExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ReorderHyperstackSlicesExpressionAlgorithm

ReorderRoiDimensionsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Algorithm that reorders Hyperstack dimensions

ReorderRoiDimensionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ReorderRoiDimensionsAlgorithm

ReorderRoiDimensionsAlgorithm(ReorderRoiDimensionsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ReorderRoiDimensionsAlgorithm

reorderTasks(List<String>) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon

Reorders the tasks according to the list of IDs.

repaintLater(Component) - Static method in class org.hkijena.jipipe.utils.UIUtils

repaintLowLag() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

repairGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Repairs the graph by removing old nodes and adding missing ones

replaceCompartmentOutput(JIPipeProjectCompartmentOutput) - Static method in class org.hkijena.jipipe.api.compartments.algorithms.IOInterfaceAlgorithm

Replaces a JIPipeProjectCompartmentOutput by an equivalent interface

ReplaceLabelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

ReplaceLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ReplaceLabelsAlgorithm

ReplaceLabelsAlgorithm(ReplaceLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ReplaceLabelsAlgorithm

ReplaceLabelsByTableAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

ReplaceLabelsByTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm

ReplaceLabelsByTableAlgorithm(ReplaceLabelsByTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm

replaceNode(JIPipeGraphNode, JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Replaces a node with another.

replaceWith(JIPipeGraph) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Replaces all contents with the ones in the other graph Does not apply copying!

report(JIPipeValidationReportEntry) - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReport

Reports an issue

report(JIPipeValidationReportContext, JIPipeValidatable) - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReport

Reports a JIPipeValidatable into this report

reportConfiguredCellposeEnvironmentValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in interface org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2EnvironmentAccessNode

Generates a validity report entry if the configured environment has an issue

reportConfiguredCellposeEnvironmentValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in interface org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3EnvironmentAccessNode

Generates a validity report entry if the configured environment has an issue

reportConfiguredIlastikEnvironmentValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in interface org.hkijena.jipipe.plugins.ilastik.environments.IlastikEnvironmentAccessNode

Generates a validity report entry if the configured environment has an issue

reportConfiguredOMEROEnvironmentValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in interface org.hkijena.jipipe.plugins.omero.OMEROCredentialAccessNode

Generates a validity report entry if the configured environment has an issue

reportConfiguredOmniposeEnvironmentValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in interface org.hkijena.jipipe.plugins.omnipose.OmniposeEnvironmentAccessNode

Generates a validity report entry if the configured environment has an issue

reportConfiguredPythonEnvironmentValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in interface org.hkijena.jipipe.plugins.python.algorithms.python.PythonEnvironmentAccessNode

Generates a validity report entry if the configured environment has an issue

reportConfiguredREnvironmentValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in interface org.hkijena.jipipe.plugins.r.REnvironmentAccessNode

Generates a validity report entry if the configured environment has an issue

ReportSettings() - Constructor for class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.environments.JIPipeProcessArtifactEnvironment

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport, JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Reports the validity for the target node and its dependencies

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport, JIPipeGraphNode, Set<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Reports the validity for the target node and its dependencies

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.parameters.DefaultJIPipeParameterGenerator

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport, JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Reports the validity for the target node and its dependencies

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in interface org.hkijena.jipipe.api.validation.JIPipeValidatable

Generates a validity report

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotSeriesEditor

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRun

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.JIPipe

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in interface org.hkijena.jipipe.JIPipeDependency

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.JIPipeMutableDependency

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.JIPipeRegistryIssues

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ModifyAnnotationScript

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SplitByAnnotationScript

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelIterating

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelSimpleIterating

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.core.nodes.JIPipeCommentNode

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironment

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataRowFolder

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileDataSource

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileListDataSource

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderDataSource

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderListDataSource

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathDataSource

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathListDataSource

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.BooleanFormData

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.DoubleFormData

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.EnumFormData

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.GroupHeaderFormData

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.IntegerFormData

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.StringFormData

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SubdivideFilamentEdges

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingROI2DAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingROI3DAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeChannelsAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsAlgorithm

Deprecated.

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve.ConvolveByParameter2DAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.MaskDrawerFormData

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.ROIDrawerFormData

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.ImageFromMatrix2DAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.RunImageJExporterAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.RunImageJImporterAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.MacroWrapperAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.FastImageArithmeticsAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm

Deprecated.

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DAlgorithm

Deprecated.

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc.DataToPreviewAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.MontageToStackAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsScriptAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge.FilterAndMergeRoiByStatisticsScriptAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionLoaderPlugin

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionRegistrationTask

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROPlateReferenceAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMERODatasetReferenceDataSource

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROImageReferenceDataSource

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROPlateReferenceDataSource

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROProjectReferenceDataSource

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROScreenReferenceDataSource

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROWellReferenceDataSource

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROImageAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROTableAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.manage.OMEROCreateDatasetAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListDatasetImagesAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListDatasetsAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListGroupsAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListPlatesAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListProjectsAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListScreensAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListWellImagesAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListWellsAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROImageToDatasetAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROTableAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameter

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameter

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtraction

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.NumberRangeParameterGenerator

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalDataAnnotationNameParameter

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExporterRef

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImporterRef

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRef

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRef

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeNodeInfoRef

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeParameterTypeInfoRef

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2Algorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTablesAlgorithm

Deprecated.

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.IteratingJythonScriptAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.JythonScriptAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.MergingJythonScriptAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.SimpleIteratingJythonScriptAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.IteratingPythonScriptAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.MergingPythonScriptAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.PythonScriptAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.python.PythonEnvironment

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.python.PythonPackageLibraryEnvironment

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.r.algorithms.ImportRDatasetAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.r.algorithms.IteratingRScriptAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.r.algorithms.MergingRScriptAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.r.REnvironment

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ApplyExpressionToColumnsAlgorithm

Deprecated.

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameSingleColumnsAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumnsAlgorithm

Deprecated.

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.tables.nodes.GenerateColumnAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.tables.nodes.GenerateTableFromExpressionAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.tables.nodes.IntegrateColumnsAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.tables.nodes.ModifyAndMergeTablesScript

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.tables.nodes.ModifyTablesScript

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.SortTableRowsAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.tables.nodes.TablesFromScript

reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnGeneratorParameter

requestCancelRun() - Method in class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunExecuteUI

Cancels the run

requestCancelRun() - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueuePanelUI

Cancels the run

requestFocusOnShown(JComponent) - Static method in class org.hkijena.jipipe.utils.UIUtils

requestGCImmediatelyAfterCall() - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter.LambdaSubscriber

requestGCImmediatelyAfterCall() - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter.StrongObjectSubscriber

requestGCImmediatelyAfterCall() - Method in interface org.hkijena.jipipe.api.events.JIPipeEventEmitter.Subscriber

requestGCImmediatelyAfterCall() - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter.WeakObjectSubscriber

reset() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJLogWrapper

reset(ImagePlus, ImageProcessor) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.ApplyDisplayContrastAlgorithm

reset() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

resetCounter() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Sets the measurement counter to zero.

resetCustomName() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder

resetInheritedSlot() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder

Deprecated.

resetLUT() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerOpacityLUTEditor

resetParameters() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OMEAccessorParameter

resetSearch() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableUI

resetZoom() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

resizeFilter(ImageProcessor, int, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTCustomFilter

reslice(ImagePlus) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Reslicer

ResliceAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

ResliceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ResliceAlgorithm

ResliceAlgorithm(ResliceAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ResliceAlgorithm

Reslicer - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

Copy of Slicer that has a proper API

Reslicer() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Reslicer

Reslicer.Direction - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.utils

resolve(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage

resolve(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage

resolve(String) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage

Returns a new storage that resolves to a path inside this storage

resolve(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage

Returns a new storage that resolves to a path inside this storage

resolve(String) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeWriteDataStorage

Returns a new storage that resolves to a path inside this storage

resolve(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeWriteDataStorage

Returns a new storage that resolves to a path inside this storage

resolve(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage

resolve(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPWriteDataStorage

resolve(JIPipeParameterTree) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference

Tries to resolve the path

resolve(String) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

Creates a sub-progress that has the same cancellation and progress, but shows the new category in front of sub-messages

resolve(String, int, int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

Creates a sub-progress that has the same cancellation and progress, but shows the new category in front of sub-messages.

resolve(JIPipeProject) - Method in class org.hkijena.jipipe.plugins.parameters.library.graph.GraphNodeReferenceParameter

resolveAndLog(String) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

Applies resolve(logPrepend) and then logs an empty message

resolveAndLog(String, int, int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

Creates a sub-progress that has the same cancellation and progress, but shows the new category in front of sub-messages.

resolveAndLogForEach(String, Collection<T>, BiConsumer<T, JIPipeProgressInfo>) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

Applies a for-each operation where the progress is logged

resolveAndLogForEach(String, T[], BiConsumer<T, JIPipeProgressInfo>) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

Applies a for-each operation where the progress is logged

resolveAndLogForEach(String, int[], BiConsumer<Integer, JIPipeProgressInfo>) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

Applies a for-each operation where the progress is logged

resolveAndLogForEach(String, byte[], BiConsumer<Byte, JIPipeProgressInfo>) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

Applies a for-each operation where the progress is logged

resolveAndLogForEach(String, long[], BiConsumer<Long, JIPipeProgressInfo>) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

Applies a for-each operation where the progress is logged

resolveAndLogForEach(String, short[], BiConsumer<Short, JIPipeProgressInfo>) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

Applies a for-each operation where the progress is logged

resolveAndLogForEach(String, float[], BiConsumer<Float, JIPipeProgressInfo>) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

Applies a for-each operation where the progress is logged

resolveAndLogForEach(String, double[], BiConsumer<Double, JIPipeProgressInfo>) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

Applies a for-each operation where the progress is logged

resolveAndMakeSubDirectory(Path, String) - Static method in class org.hkijena.jipipe.utils.PathUtils

resolveAndMakeSubDirectory(Path, Path) - Static method in class org.hkijena.jipipe.utils.PathUtils

resolveNodes(JIPipeProject) - Method in class org.hkijena.jipipe.api.run.JIPipeProjectRunSet

ResolveVariableOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

ResolveVariableOperator(int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.ResolveVariableOperator

RESOURCE_BASE_PATH - Static variable in class org.hkijena.jipipe.plugins.ij3d.IJ3DPlugin

RESOURCE_BASE_PATH - Static variable in class org.hkijena.jipipe.plugins.ijweka.WekaPlugin

RESOURCE_BASE_PATH - Static variable in class org.hkijena.jipipe.utils.ResourceUtils

RESOURCES - Static variable in class org.hkijena.jipipe.JIPipe

Resource manager for core JIPipe

RESOURCES - Static variable in class org.hkijena.jipipe.plugins.annotation.AnnotationsPlugin

RESOURCES - Static variable in class org.hkijena.jipipe.plugins.cellpose.CellposePlugin

RESOURCES - Static variable in class org.hkijena.jipipe.plugins.clij2.CLIJPlugin

RESOURCES - Static variable in class org.hkijena.jipipe.plugins.filesystem.FilesystemPlugin

RESOURCES - Static variable in class org.hkijena.jipipe.plugins.ij3d.IJ3DPlugin

RESOURCES - Static variable in class org.hkijena.jipipe.plugins.ijfilaments.FilamentsPlugin

RESOURCES - Static variable in class org.hkijena.jipipe.plugins.ijtrackmate.TrackMatePlugin

RESOURCES - Static variable in class org.hkijena.jipipe.plugins.ilastik.IlastikPlugin

RESOURCES - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.ImageJAlgorithmsPlugin

RESOURCES - Static variable in class org.hkijena.jipipe.plugins.imp.ImpPlugin

RESOURCES - Static variable in class org.hkijena.jipipe.plugins.omero.OMEROPlugin

RESOURCES - Static variable in class org.hkijena.jipipe.plugins.omnipose.OmniposePlugin

RESOURCES - Static variable in class org.hkijena.jipipe.plugins.opencv.OpenCvPlugin

RESOURCES - Static variable in class org.hkijena.jipipe.plugins.python.PythonPlugin

RESOURCES - Static variable in class org.hkijena.jipipe.plugins.r.RPlugin

RESOURCES - Static variable in class org.hkijena.jipipe.plugins.scene3d.Scene3DPlugin

RESOURCES - Static variable in class org.hkijena.jipipe.plugins.tables.TablesPlugin

RESOURCES - Static variable in class org.hkijena.jipipe.plugins.utils.UtilitiesPlugin

ResourceUtils - Class in org.hkijena.jipipe.utils

Functions for resource access

ResourceUtils() - Constructor for class org.hkijena.jipipe.utils.ResourceUtils

restartGUI() - Static method in class org.hkijena.jipipe.JIPipe

RestartJIPipeDesktopTool - Class in org.hkijena.jipipe.plugins.tools

RestartJIPipeDesktopTool(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.tools.RestartJIPipeDesktopTool

Creates a new instance

restore() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal.Snapshot

restore() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournalSnapshot

restore() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal.Snapshot

restore() - Method in class org.hkijena.jipipe.desktop.app.history.JIPipeDesktopCurrentStateSnapshot

restore(JIPipeDesktopProjectWorkbench) - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopJIPipeProjectTabMetadata

restoreCacheFromZIPOrDirectory() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

restoreDefaultDockState() - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmSettingsPanelIOEditor

restoreDefaultDockState() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

restoreDefaultDockState() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.JIPipeDesktopCompartmentsGraphEditorUI

restoreDefaultDockState() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.JIPipeDesktopPipelineGraphEditorUI

restoreDockStateFromSettings() - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmSettingsPanelIOEditor

restoreDockStateFromSettings() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

restoreDockStateFromSettings() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.JIPipeDesktopCompartmentsGraphEditorUI

restoreDockStateFromSettings() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.JIPipeDesktopPipelineGraphEditorUI

restoreStandardTabs(boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

restoreState(JIPipeDesktopDockPanel.State) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

restoreStoragePaths(JIPipeProject, Path) - Static method in class org.hkijena.jipipe.api.run.JIPipeGraphRun

Writes node internal storage paths and output slot storage paths into the graph of the project Used for the legacy result viewer

RestoreVertexValueBackupAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

RestoreVertexValueBackupAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.RestoreVertexValueBackupAlgorithm

RestoreVertexValueBackupAlgorithm(RestoreVertexValueBackupAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.RestoreVertexValueBackupAlgorithm

restrictInputSlotCount(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Restrict the number of input slots

restrictInputTo(Class<? extends JIPipeData>...) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Restricts the slot to specified data types

restrictInputTo(Collection<Class<? extends JIPipeData>>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Restricts the slot to specified data types

restrictOutputSlotCount(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Restrict the number output slots

restrictOutputTo(Class<? extends JIPipeData>...) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Restricts the slot to specified data types

restrictOutputTo(Collection<Class<? extends JIPipeData>>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Restricts the slot to specified data types

ResultItem(String, Object) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopExpressionCalculatorUI.ResultItem

RESULTS_TABLE_SLOT_NAME - Static variable in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNode

resultsTable(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Hough_Circle

ResultsTableData - Class in org.hkijena.jipipe.plugins.tables.datatypes

Data containing a ResultsTable

ResultsTableData() - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Creates a new instance

ResultsTableData(Map<String, TableColumnData>) - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Creates a table from a map of column name to column data

ResultsTableData(Collection<TableColumnData>) - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Creates a table from a list of columns.

ResultsTableData(ResultsTable) - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Wraps a results table

ResultsTableData(ResultsTableData) - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Creates a copy

ResultsTableData.Deserializer - Class in org.hkijena.jipipe.plugins.tables.datatypes

ResultsTableData.Index - Class in org.hkijena.jipipe.plugins.tables.datatypes

Points to a cell in the table

ResultsTableData.IntegratingColumnOperationEntry - Class in org.hkijena.jipipe.plugins.tables.datatypes

An entry for obtaining statistics/integrated values

ResultsTableData.RowBuilder - Class in org.hkijena.jipipe.plugins.tables.datatypes

Helper class for adding a row into the table

ResultsTableData.Serializer - Class in org.hkijena.jipipe.plugins.tables.datatypes

ResultsTableDataDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.tables.parameters

Editor for ResultsTableData

ResultsTableDataDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.ResultsTableDataDesktopParameterEditorUI

ResultsTableDataImageJExporter - Class in org.hkijena.jipipe.plugins.tables.compat

ResultsTableDataImageJExporter() - Constructor for class org.hkijena.jipipe.plugins.tables.compat.ResultsTableDataImageJExporter

ResultsTableDataImageJImporter - Class in org.hkijena.jipipe.plugins.tables.compat

ResultsTableDataImageJImporter() - Constructor for class org.hkijena.jipipe.plugins.tables.compat.ResultsTableDataImageJImporter

ResultsTableDataList - Class in org.hkijena.jipipe.plugins.tables.parameters.collections

A list of ResultsTableData

ResultsTableDataList() - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.collections.ResultsTableDataList

Creates a new instance

ResultsTableDataList(ResultsTableDataList) - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.collections.ResultsTableDataList

Creates a copy

ResultsTableDataPreview - Class in org.hkijena.jipipe.plugins.tables

ResultsTableDataPreview(JIPipeDesktopProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableRowInfo, JIPipeDataAnnotationInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.ResultsTableDataPreview

Creates a new renderer

ResultsTableDataViewer - Class in org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers

ResultsTableDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ResultsTableDataViewer

ResultsTableFromGUI - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

Imports ImagePlusData from the GUI

ResultsTableFromGUI(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ResultsTableFromGUI

ResultsTableFromGUI(ResultsTableFromGUI) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ResultsTableFromGUI

ResultsTableToGUI - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

Imports ImagePlusData from the GUI

ResultsTableToGUI(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ResultsTableToGUI

ResultsTableToGUI(ResultsTableToGUI) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ResultsTableToGUI

retainAll(Collection<?>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

retainAll(Collection<?>) - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

revalidateDockLater() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow

reverse(byte[]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils

reverse(short[]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils

reverse(int[]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils

reverse(long[]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils

reverse(float[]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils

reverse(double[]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils

reverse(T[]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils

reversed(int[]) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.ImgUtils

Return a new reversed array.

reversed(long[]) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.ImgUtils

Return a new reversed array.

reversed(String) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.ImgUtils

Return a reversed string.

RGBBlueTrackBackground - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

RGBBlueTrackBackground() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.RGBBlueTrackBackground

RGBColorSpace - Class in org.hkijena.jipipe.plugins.imagejdatatypes.colorspace

RGBColorSpace() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.RGBColorSpace

RGBGreenTrackBackground - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

RGBGreenTrackBackground() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.RGBGreenTrackBackground

rgbPixelLerp(int, int, double) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

RGBRedTrackBackground - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

RGBRedTrackBackground() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.RGBRedTrackBackground

rgbToChannels(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Convert a RGB image to a grayscale image where the RGB channels are split into individual planes

RGBToHexFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.color

RGBToHexFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.color.RGBToHexFunction

RGBToHSBFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.color

RGBToHSBFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.color.RGBToHSBFunction

RGBToLABFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.color

RGBToLABFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.color.RGBToLABFunction

RidgeDetector2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment

RidgeDetector2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

RidgeDetector2DAlgorithm(RidgeDetector2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

ROI2DListData - Class in org.hkijena.jipipe.plugins.imagejdatatypes.datatypes

Contains Roi

ROI2DListData() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Creates an empty set of ROI

ROI2DListData(List<Roi>) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Creates a deep copy

ROI2DListData(RoiManager) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Initializes from a RoiManager

ROI2DListDataViewer - Class in org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers

ROI2DListDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ROI2DListDataViewer

ROI2DRelationMeasurement - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi

ROI2DRelationMeasurementColumn - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi

Measurements defined by Measurements.

ROI2DRelationMeasurementExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi

A variable source that contains the ImageJ measurements.

ROI2DRelationMeasurementExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementExpressionParameterVariablesInfo

ROI2DRelationMeasurementSetParameter - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi

ROI2DRelationMeasurementSetParameter() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementSetParameter

ROI2DRelationMeasurementSetParameter(DynamicSetParameter<ROI2DRelationMeasurement>) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementSetParameter

ROI2DRelationMeasurementSetParameter(Set<ROI2DRelationMeasurement>) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementSetParameter

roi2DtoRoi3D(ROI2DListData, boolean, boolean, Neighborhood3D, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ij3d.IJ3DUtils

Converts 2D ROI to 3D ROI

Roi2DToRoi3DConverterAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert

Roi2DToRoi3DConverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi2DToRoi3DConverterAlgorithm

Roi2DToRoi3DConverterAlgorithm(Roi2DToRoi3DConverterAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi2DToRoi3DConverterAlgorithm

ROI3D - Class in org.hkijena.jipipe.plugins.ij3d.datatypes

Wrapper around an Object3D that also provides additional information and methods found within Roi

ROI3D() - Constructor for class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

ROI3D(ROI3D) - Constructor for class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

ROI3D(Object3D) - Constructor for class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

ROI3DCalculatorAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify

ROI3DCalculatorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ROI3DCalculatorAlgorithm

ROI3DCalculatorAlgorithm(ROI3DCalculatorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ROI3DCalculatorAlgorithm

Roi3DDrawer - Class in org.hkijena.jipipe.plugins.ij3d.utils

Roi3DDrawer() - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.Roi3DDrawer

Roi3DDrawer(Roi3DDrawer) - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.Roi3DDrawer

Roi3DFromLabelsAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate

Roi3DFromLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm

Roi3DFromLabelsAlgorithm(Roi3DFromLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm

ROI3DImageJExporter - Class in org.hkijena.jipipe.plugins.ij3d.compat

ROI3DImageJExporter() - Constructor for class org.hkijena.jipipe.plugins.ij3d.compat.ROI3DImageJExporter

ROI3DImageJImporter - Class in org.hkijena.jipipe.plugins.ij3d.compat

ROI3DImageJImporter() - Constructor for class org.hkijena.jipipe.plugins.ij3d.compat.ROI3DImageJImporter

ROI3DListCellRenderer - Class in org.hkijena.jipipe.plugins.ij3d.imageviewer

ROI3DListCellRenderer() - Constructor for class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROI3DListCellRenderer

ROI3DListData - Class in org.hkijena.jipipe.plugins.ij3d.datatypes

ROI3DListData() - Constructor for class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

ROI3DListData(ROI3DListData) - Constructor for class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

ROI3DListDataViewer - Class in org.hkijena.jipipe.plugins.ij3d.viewers

ROI3DListDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.ij3d.viewers.ROI3DListDataViewer

ROI3DMeasurement - Enum in org.hkijena.jipipe.plugins.ij3d.utils

ROI3DMeasurementColumn - Enum in org.hkijena.jipipe.plugins.ij3d.utils

Measurements defined by Measurements.

ROI3DMeasurementExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.ij3d.utils

A variable source that contains the ImageJ measurements.

ROI3DMeasurementExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurementExpressionParameterVariablesInfo

ROI3DMeasurementSetParameter - Class in org.hkijena.jipipe.plugins.ij3d.utils

ROI3DMeasurementSetParameter() - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurementSetParameter

ROI3DMeasurementSetParameter(DynamicSetParameter<ROI3DMeasurement>) - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurementSetParameter

ROI3DMeasurementSetParameter(Set<ROI3DMeasurement>) - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurementSetParameter

ROI3DOutline - Enum in org.hkijena.jipipe.plugins.ij3d.utils

ROI3DRelationMeasurement - Enum in org.hkijena.jipipe.plugins.ij3d.utils

ROI3DRelationMeasurementColumn - Enum in org.hkijena.jipipe.plugins.ij3d.utils

Measurements defined by Measurements.

ROI3DRelationMeasurementExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.ij3d.utils

A variable source that contains the ImageJ measurements.

ROI3DRelationMeasurementExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurementExpressionParameterVariablesInfo

ROI3DRelationMeasurementSetParameter - Class in org.hkijena.jipipe.plugins.ij3d.utils

ROI3DRelationMeasurementSetParameter() - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurementSetParameter

ROI3DRelationMeasurementSetParameter(DynamicSetParameter<ROI3DRelationMeasurement>) - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurementSetParameter

ROI3DRelationMeasurementSetParameter(Set<ROI3DRelationMeasurement>) - Constructor for class org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurementSetParameter

Roi3DTo3DMeshAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert

Roi3DTo3DMeshAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm

Roi3DTo3DMeshAlgorithm(Roi3DTo3DMeshAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm

Roi3DToLabelsAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert

Roi3DToLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DToLabelsAlgorithm

Roi3DToLabelsAlgorithm(Roi3DToLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DToLabelsAlgorithm

Roi3DToMaskAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert

Roi3DToMaskAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DToMaskAlgorithm

Roi3DToMaskAlgorithm(Roi3DToMaskAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DToMaskAlgorithm

Roi3DToRGBAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert

Roi3DToRGBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DToRGBAlgorithm

Roi3DToRGBAlgorithm(Roi3DToRGBAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DToRGBAlgorithm

Roi3DToRoi2DConverterAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert

Roi3DToRoi2DConverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DToRoi2DConverterAlgorithm

Roi3DToRoi2DConverterAlgorithm(Roi3DToRoi2DConverterAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DToRoi2DConverterAlgorithm

ROI_INPUT_SLOT - Static variable in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.SkeletonToSimplifiedFilamentsFijiAlgorithm

ROI_INPUT_SLOT - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm

RoiCalculatorAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Wrapper around RoiManager

RoiCalculatorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiCalculatorAlgorithm

Instantiates a new node type.

RoiCalculatorAlgorithm(RoiCalculatorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiCalculatorAlgorithm

Instantiates a new node type.

ROIDataPreview - Class in org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis

ROIDataPreview(JIPipeDesktopProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableRowInfo, JIPipeDataAnnotationInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ROIDataPreview

Creates a new renderer

RoiDrawer - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

Advanced ROI drawing algorithm with better flexibility compared to the methods of ROI2DListData

RoiDrawer() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

RoiDrawer(RoiDrawer) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

ROIDrawerFormData - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms

Structural FormData for drawing ROIs

ROIDrawerFormData(List<JIPipeMultiIterationStep>, DrawROIAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.ROIDrawerFormData

ROIEditor - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

Parameters to edit ROI and transform Roi via the settings (no-destructive)

ROIEditor() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

ROIEditor(Roi) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

ROIElementDrawingMode - Enum in org.hkijena.jipipe.plugins.imagejdatatypes.util

Determines how elements of ROI are drawn

ROIFilterSettings() - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

ROIFilterSettings(FilterRoi3DByOverlapAlgorithm.ROIFilterSettings) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

ROIFilterSettings() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

ROIFilterSettings(FilterROIByOverlapAlgorithm.ROIFilterSettings) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

RoiFloodFillAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Wrapper around RoiManager

RoiFloodFillAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm

Instantiates a new node type.

RoiFloodFillAlgorithm(RoiFloodFillAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm

Instantiates a new node type.

RoiFloodFillAlgorithm.Mode - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

ROIFromGUI - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

Imports ImagePlusData from the GUI

ROIFromGUI(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ROIFromGUI

ROIFromGUI(ROIFromGUI) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ROIFromGUI

ROIHandler - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

Copy of ROIHandler to

ROIHandler() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIHandler

RoiLabel - Enum in org.hkijena.jipipe.plugins.imagejdatatypes.util

Moved out of the ImageJ algorithms extension

RoiListCellRenderer - Class in org.hkijena.jipipe.plugins.imageviewer.utils

RoiListCellRenderer() - Constructor for class org.hkijena.jipipe.plugins.imageviewer.utils.RoiListCellRenderer

RoiManagerImageJExporter - Class in org.hkijena.jipipe.plugins.imagejdatatypes.compat

RoiManagerImageJExporter() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.compat.RoiManagerImageJExporter

RoiManagerImageJImporter - Class in org.hkijena.jipipe.plugins.imagejdatatypes.compat

RoiManagerImageJImporter() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.compat.RoiManagerImageJImporter

RoiManagerImageJImporterUI - Class in org.hkijena.jipipe.plugins.imagejdatatypes.compat

Importer around RoiManagerImageJImporter

RoiManagerImageJImporterUI(JIPipeDesktopWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.compat.RoiManagerImageJImporterUI

ROIManagerPlugin2D - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager

ROIManagerPlugin2D(JIPipeDesktopLegacyImageViewer) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

ROIManagerPlugin2DInfoContextPanel - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager

ROIManagerPlugin2DInfoContextPanel(ROIManagerPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2DInfoContextPanel

ROIManagerPlugin2DSelectionContextPanel - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager

ROIManagerPlugin2DSelectionContextPanel(ROIManagerPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2DSelectionContextPanel

ROIManagerPlugin3D - Class in org.hkijena.jipipe.plugins.ij3d.imageviewer

ROIManagerPlugin3D(JIPipeDesktopLegacyImageViewer) - Constructor for class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

ROIManagerPlugin3DInfoContextPanel - Class in org.hkijena.jipipe.plugins.ij3d.imageviewer

ROIManagerPlugin3DInfoContextPanel(ROIManagerPlugin3D) - Constructor for class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3DInfoContextPanel

ROIManagerPlugin3DSelectionContextPanel - Class in org.hkijena.jipipe.plugins.ij3d.imageviewer

ROIManagerPlugin3DSelectionContextPanel(ROIManagerPlugin3D) - Constructor for class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3DSelectionContextPanel

ROINameToLabelEntry() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm.ROINameToLabelEntry

ROINameToLabelEntry(ROIToLabelsByNameAlgorithm.ROINameToLabelEntry) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm.ROINameToLabelEntry

RoiNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories

RoiNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory

RoiOutline - Enum in org.hkijena.jipipe.plugins.imagejdatatypes.util

Available ways to address the shape of a Roi

RoiOverlapStatisticsVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi

RoiOverlapStatisticsVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.RoiOverlapStatisticsVariablesInfo

ROIPicker2DTool - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager

ROIPicker2DTool(ROIManagerPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIPicker2DTool

RoiPropertiesToAnnotationsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations

RoiPropertiesToAnnotationsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

RoiPropertiesToAnnotationsAlgorithm(RoiPropertiesToAnnotationsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

RoiRelationMeasurement - Enum in org.hkijena.jipipe.plugins.imagejdatatypes.util.measure

RoiRelationMeasurementSet - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util.measure

RoiRelationMeasurementSet() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.RoiRelationMeasurementSet

RoiRelationMeasurementSet(RoiRelationMeasurementSet) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.RoiRelationMeasurementSet

RoiRelationMeasurementSet(Set<RoiRelationMeasurement>) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.RoiRelationMeasurementSet

RoiStatisticsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure

Wrapper around RoiManager

RoiStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm

Instantiates a new node type.

RoiStatisticsAlgorithm(RoiStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm

Instantiates a new node type.

RoiToCentroidAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Wrapper around RoiManager

RoiToCentroidAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiToCentroidAlgorithm

Instantiates a new node type.

RoiToCentroidAlgorithm(RoiToCentroidAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiToCentroidAlgorithm

Instantiates a new node type.

ROIToGUI - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

Imports ImagePlusData from the GUI

ROIToGUI(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ROIToGUI

ROIToGUI(ROIToGUI) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ROIToGUI

ROIToLabelsByNameAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert

ROIToLabelsByNameAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm

ROIToLabelsByNameAlgorithm(ROIToLabelsByNameAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm

ROIToLabelsByNameAlgorithm.ROINameToLabelEntry - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert

ROIToLabelsByNameAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert

ROIToLabelsExpressionAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert

ROIToLabelsExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm

ROIToLabelsExpressionAlgorithm(ROIToLabelsExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm

ROIToLabelsExpressionAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert

RoiToMaskAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert

Wrapper around RoiManager

RoiToMaskAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm

Instantiates a new node type.

RoiToMaskAlgorithm(RoiToMaskAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm

Instantiates a new node type.

RoiToRGBAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert

Wrapper around RoiDrawer

RoiToRGBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

Instantiates a new node type.

RoiToRGBAlgorithm(RoiToRGBAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

Instantiates a new node type.

role() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeInputSlot

role() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeOutputSlot

RollingBallBackgroundEstimator2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background

Wrapper around RankFilters

RollingBallBackgroundEstimator2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm

Instantiates a new node type.

RollingBallBackgroundEstimator2DAlgorithm(RollingBallBackgroundEstimator2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm

Instantiates a new node type.

RollingBallBackgroundEstimator2DAlgorithm.BackgroundType - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background

Available background types

RollingBallBackgroundEstimator2DAlgorithm.Method - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background

Available methods

rotate(double, Point2D) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Rotates the ROI around the center Does not change the ROIs in this list

rotate(ImagePlus, double, boolean, Color, boolean, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Rotates the image by a specified amount of degrees to the right

RotateRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Wrapper around RoiManager

RotateRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RotateRoiAlgorithm

RotateRoiAlgorithm(RotateRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RotateRoiAlgorithm

rotateTabRuns(int, int) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI.TabbedPaneLayout

RoundColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a floor function

RoundColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.RoundColumnOperation

RoundedLineBorder - Class in org.hkijena.jipipe.utils.ui

Rounded line border that actually works ...

RoundedLineBorder(Paint, int, int) - Constructor for class org.hkijena.jipipe.utils.ui.RoundedLineBorder

RoundedLineBorder(Paint, int, int, boolean) - Constructor for class org.hkijena.jipipe.utils.ui.RoundedLineBorder

RoundFloatImageAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

RoundFloatImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.RoundFloatImageAlgorithm

RoundFloatImageAlgorithm(RoundFloatImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.RoundFloatImageAlgorithm

RoundToDecimalsFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.math

RoundToDecimalsFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.math.RoundToDecimalsFunction

RoundToEvenFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.math

RoundToEvenFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.math.RoundToEvenFunction

RoundToOddFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.math

RoundToOddFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.math.RoundToOddFunction

row - Variable in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.Index

RowBuilder(ResultsTableData, int) - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.RowBuilder

RowIndexTableColumnData - Class in org.hkijena.jipipe.plugins.tables.datatypes

Generates numbers from 0 to row count

RowIndexTableColumnData() - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.RowIndexTableColumnData

RPlugin - Class in org.hkijena.jipipe.plugins.r

RPlugin() - Constructor for class org.hkijena.jipipe.plugins.r.RPlugin

RPluginApplicationSettings - Class in org.hkijena.jipipe.plugins.r

RPluginApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.r.RPluginApplicationSettings

RPluginProjectSettings - Class in org.hkijena.jipipe.plugins.r

RPluginProjectSettings() - Constructor for class org.hkijena.jipipe.plugins.r.RPluginProjectSettings

RScriptParameter - Class in org.hkijena.jipipe.plugins.r.parameters

RScriptParameter() - Constructor for class org.hkijena.jipipe.plugins.r.parameters.RScriptParameter

RScriptParameter(ScriptParameter) - Constructor for class org.hkijena.jipipe.plugins.r.parameters.RScriptParameter

RScriptParameter(String) - Constructor for class org.hkijena.jipipe.plugins.r.parameters.RScriptParameter

RTokenMaker - Class in org.hkijena.jipipe.plugins.r.ui

RTokenMaker() - Constructor for class org.hkijena.jipipe.plugins.r.ui.RTokenMaker

Constructor.

RTokenMaker(Reader) - Constructor for class org.hkijena.jipipe.plugins.r.ui.RTokenMaker

Creates a new scanner There is also a java.io.InputStream version of this constructor.

RTokenMaker(InputStream) - Constructor for class org.hkijena.jipipe.plugins.r.ui.RTokenMaker

Creates a new scanner.

run() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryOperationRun

run() - Method in class org.hkijena.jipipe.api.backups.CollectBackupsRun

run() - Method in class org.hkijena.jipipe.api.backups.DeleteOldBackupsRun

run() - Method in class org.hkijena.jipipe.api.backups.PruneBackupsRun

run() - Method in class org.hkijena.jipipe.api.cache.JIPipeCacheClearAllRun

run() - Method in class org.hkijena.jipipe.api.cache.JIPipeCacheClearOutdatedRun

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compartments.algorithms.IOInterfaceAlgorithm

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

run() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation.ImportDataRun

run() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGenerationRun

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

run() - Method in class org.hkijena.jipipe.api.InlinedJIPipeRunnable

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode

run() - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseBuilderRun

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Runs the workload

run() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction

run() - Method in class org.hkijena.jipipe.api.project.JIPipeArchiveProjectToDirectoryRun

run() - Method in class org.hkijena.jipipe.api.project.JIPipeArchiveProjectToZIPRun

run() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun

run() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow.DownloadFullDataRun

run() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstaller

run() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataExporterRun

run() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToFilesByMetadataExporterRun

run() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToOutputExporterRun

run() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToZIPExporterRun

run() - Method in class org.hkijena.jipipe.desktop.app.cache.importers.JIPipeDesktopImportCachedSlotOutputRun

run() - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopCollectTraceRun

run() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.ReloadListRun

run() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopLegacyAddNodePanel.ReloadListRun

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddBookmarkNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewCompartmentUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.AddNewParameterSetNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.ClearCacheNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.CollapseIOInterfaceNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DeleteCompartmentUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DeleteNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisablePassThroughNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableSaveOutputsNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.DisableVirtualOutputNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnablePassThroughNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableSaveOutputsNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.EnableVirtualOutputsNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.ExportCompartmentAsJsonNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.GroupNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.InvertSelectionNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.IsolateNodesUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.JsonAlgorithmToGroupNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.LockNodeLocationSizeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.LowerUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIDownContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUILeftContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIRightContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.navigation.MoveNodeUIUpContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeContextActionWrapperUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeUIContextAction

Runs the workload

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.OpenCacheBrowserInWindowUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RaiseUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RemoveBookmarkNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RunAndShowIntermediateResultsNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RunAndShowResultsNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SelectAllNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SelectAndMoveNodeHereNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SendToBackgroundUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SendToForegroundUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UnlockNodeLocationSizeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheOnlyPredecessorsNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheShowIntermediateNodeUIContextAction

run(boolean, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorRunManager

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsCopyNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsCutNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsPasteNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphCopyNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphCutNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphDuplicateNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphPasteNodeUIContextAction

run() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.nodefinder.JIPipeDesktopNodeFinderDialogUI.ReloadListRun

run() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.RebuildReportRun

run() - Method in class org.hkijena.jipipe.desktop.app.plugins.artifactsmanager.JIPipeDesktopApplyPluginManagerRun

run() - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopLoadResultDirectoryIntoCacheRun

run() - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopLoadResultZipIntoCacheRun

run() - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopSaveProjectAndCacheToDirectoryRun

run() - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopSaveProjectAndCacheToZipRun

run() - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeExtractTemplateZipFileRun

run() - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderRun

run() - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRun

run() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun

run(boolean, boolean, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunNextWindow

run(boolean, boolean, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.settings.project.JIPipeDesktopProjectOverviewRunManager

run() - Method in class org.hkijena.jipipe.JIPipeGUICommand

run() - Method in class org.hkijena.jipipe.JIPipeRunAlgorithmCommand

run() - Method in class org.hkijena.jipipe.JIPipeRunCommand

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.FilterByAnnotation

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.MergeDataSlots

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ModifyAnnotationScript

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SplitByAnnotation

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SplitByAnnotationScript

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNode

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.core.nodes.JIPipeCommentNode

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileDataSource

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileListDataSource

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderDataSource

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderListDataSource

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.OutputFolderDataSource

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathDataSource

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathListDataSource

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.forms.algorithms.FormGeneratorAlgorithm

run(JIPipeDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.forms.algorithms.FormGeneratorAlgorithm

This method should add new FormData elements into the combined slot.

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.forms.algorithms.IteratingFormProcessorAlgorithm

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.forms.algorithms.MergingFormProcessorAlgorithm

run(JIPipeDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.forms.algorithms.SimpleFormGeneratorAlgorithm

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.forms.algorithms.SimpleIteratingFormProcessorAlgorithm

run(Image, double, int, int, int, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DerivativesFeaturesAlgorithm

run(Image, double, boolean, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.HessianFeatureAlgorithm

run(Image, double, double, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.StructureFeatureAlgorithm

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsScriptAlgorithm

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.DefineRectangularRoiAlgorithm

Deprecated.

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge.FilterAndMergeRoiByStatisticsScriptAlgorithm

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm

Deprecated.

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

run() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegImage

Start the image precomputations.

run() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegMask

Start the mask precomputations, which are interruptible.

run() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.ImagePlusResultImportRun

run() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.resultanalysis.OMEImageResultImportRun

run() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.RawImage2DExporterRun

run() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Stack2DExporterRun

run() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Stack2DRendererRun

run() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Video2DExporterRun

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersAlgorithm

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersTableAlgorithm

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.ExtractParametersAlgorithm

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.MultiplyParametersAlgorithm

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.plugins.nodeexamples.LoadExampleContextMenuAction

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.plugins.nodetemplate.AddTemplateContextMenuAction

run() - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderRun

run() - Method in class org.hkijena.jipipe.plugins.pipelinerender.RenderPipelineRun

run() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectCondaEnvPythonInstaller

run() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectSystemPythonInstaller

run() - Method in class org.hkijena.jipipe.plugins.python.installers.SelectVirtualEnvPythonInstaller

run() - Method in class org.hkijena.jipipe.plugins.scene3d.utils.Scene3DToColladaExporter

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.DefineTablesAlgorithm

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.ModifyAndMergeTablesScript

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.ModifyTablesScript

run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.TablesFromScript

run(JIPipeDesktopGraphCanvasUI, Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.plugins.utils.contextmenu.ParameterExplorerContextMenuAction

run() - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog

RUN_NODE_CONTEXT_MENU_ENTRIES - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

RunAndShowIntermediateResultsNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

RunAndShowIntermediateResultsNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RunAndShowIntermediateResultsNodeUIContextAction

RunAndShowResultsNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

RunAndShowResultsNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.RunAndShowResultsNodeUIContextAction

runCacheIntermediateResults(JIPipeGraphNode) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

RunCancellationExecuteWatchdog(long, JIPipeProgressInfo, ProcessUtils.ExtendedExecutor) - Constructor for class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationExecuteWatchdog

Creates a new watchdog with a given timeout.

RunCancellationWatchdog(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog

runCellpose(PythonEnvironment, List<String>, boolean, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.cellpose.utils.CellposeUtils

runColocalization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.CustomColoc2

runDisplayOperation(JIPipeDesktopDataDisplayOperation, JIPipeDataAnnotation) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopDataTableRowDisplayUtil

runDisplayOperation(JIPipeDesktopDataDisplayOperation) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopDataTableRowDisplayUtil

runExecutable(List<String>, Map<String, String>, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.environments.JIPipeProcessArtifactEnvironment

Runs the environment as process

RunExpressionAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms

RunExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.RunExpressionAlgorithm

RunExpressionAlgorithm(RunExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.RunExpressionAlgorithm

RunExpressionAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.utils.algorithms

RunFunctionFunction - Class in org.hkijena.jipipe.plugins.expressions.functions

RunFunctionFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.RunFunctionFunction

runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm

Generates data and puts the output into the specified output slot

runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm

Generates data and puts the output into the specified output slot

runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawMaskAlgorithm

runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawROIAlgorithm

runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm

Deprecated.

runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm2

runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingZeroImage

runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.GenerateMissingRoiListsAlgorithm

runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.UsePlaceholderForMissingDataAlgorithm

runIlastik(IlastikEnvironment, List<String>, boolean, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ilastik.IlastikPlugin

Runs Ilastik

RunIlastikDesktopMenuExtension - Class in org.hkijena.jipipe.plugins.ilastik

RunIlastikDesktopMenuExtension(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.ilastik.RunIlastikDesktopMenuExtension

Creates a new instance

RunImageJExporterAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

RunImageJExporterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.RunImageJExporterAlgorithm

RunImageJExporterAlgorithm(RunImageJExporterAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.RunImageJExporterAlgorithm

RunImageJImporterAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

RunImageJImporterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.RunImageJImporterAlgorithm

RunImageJImporterAlgorithm(RunImageJImporterAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.RunImageJImporterAlgorithm

runInDialog(JIPipeDesktopWorkbench, Component, JIPipeRunnable) - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

Runs the runnable in a dialog

runInDialog(JIPipeDesktopWorkbench, Component, JIPipeRunnable) - Static method in class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunExecuteUI

runInDialog(JIPipeDesktopWorkbench, Component, JIPipeRunnable, JIPipeRunnableQueue) - Static method in class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunExecuteUI

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm

Runs code on one data row

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm

Runs code on one data row

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

Runs code on one data row

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm

Runs code on one data row

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm

Runs code on one data row

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

Runs code on one data row

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm

Runs code on one data row

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByExpression

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByProjectPaths

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithData

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithDataString

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithSourceSlot

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ConvertToAnnotationTable

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.DataAnnotationToStringAnnotation

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractAndReplaceAnnotation

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractDataAnnotation

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.FilterByAnnotationIfElse

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.GenerateUniqueAnnotation

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.MergeAnnotations

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ModifyAnnotationScript

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.OverwriteAnnotations

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveAnnotationAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveDataAnnotations

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RenameAnnotation

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RenameDataAnnotation

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SetSingleAnnotation

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SimplifyAnnotationsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SplitByAnnotationScript

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.datasources.AnnotationTableFromFile

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.ImportPretrainedCellpose2ModelAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.ImportPretrainedCellpose3DenoiseModelAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.ImportPretrainedCellpose3SegmentationModelAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.ImportCellposeModelFromFileAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.ImportCellposeSizeModelFromFileAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.ImportLegacyCellposeModelAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.ImportLegacyCellposeSizeModelAlgorithm

Deprecated.

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelIterating

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelSimpleIterating

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2PullAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2PushAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotateWithPathProperties

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotationTableToPaths

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotationToPath

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ConcatenateByParameter

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ConcatenatePaths

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ConvertDataToOutputPath

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ConvertToExportedPath

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.CopyPath

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.CreateDirectory

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportData

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter2

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataTable

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataTableByParameter

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExtractFileName

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExtractParent

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.FilterPaths

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataRowFolder

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableArchive

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableDirectory

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListFiles

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListSubfolders

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ModifyPath

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ModifyPathWithExpression

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.RelativizeByParameter

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.RelativizePaths

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.RenameByString

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimpleFileAnnotationGenerator

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimpleFolderAnnotationGenerator

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimplePathAnnotationGenerator

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.zarr.ListZARRDirectoryZIPDatasetsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.zarr.ListZARRURIDatasetsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.DownloadFilesDataSource

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathFromUserDataSource

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.ProjectUserFolderDataSource

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.URIListDataSource

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.binary.DistanceMap3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.binary.ErodedVolumeFraction3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.binary.Voronoi3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.binary.Watershed3DSplittingAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.EdgeFilter3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.FindMaxima3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.SymmetryFilter3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.ImportROI3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.overlay.ExtractOverlay3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.overlay.RemoveOverlay3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.overlay.RenderOverlay3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.overlay.SetOverlay3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi2DToRoi3DConverterAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DToLabelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DToMaskAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DToRGBAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DToRoi2DConverterAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.ExportROI3DAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.ExportROI3DAlgorithm2

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DStatisticsAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.merge.MergeROI3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.ExtractROI3DMetadataAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.RemoveROI3DMetadataAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.SetROI3DMetadataFromTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ColorRoi3DByNameAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ColorRoi3DByStatisticsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ROI3DCalculatorAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process.OutlineRoi3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.ExplodeRoi3DListAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.HysteresisSegmentation3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.NucleiSegmentation3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.Watershed3DSegmentationAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentCyclesToROIAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRGBAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertROIToFilamentsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.FilterFilamentEdgesByProperties

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.FilterFilamentsByProperties

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.FilterFilamentVerticesByProperties

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.RemoveBorderFilaments

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.ImportFilamentsFromJsonAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.SkeletonToFilaments2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.SkeletonToFilaments3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.SkeletonToSimplifiedFilamentsFijiAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAX2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAX3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXResultAnalysisAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.measure.MeasureEdgesAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.measure.MeasureFilamentsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.measure.MeasureVerticesAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.merge.MergeFilamentsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesExpressionAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesManuallyAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ErodeEndVerticesAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FilamentCyclesToComponentsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FindLinearFilamentVertexOrderAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FlattenFilamentsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.RemoveVertexValueBackupsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.RestoreVertexValueBackupAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetFilamentMetadataToComponentIndexAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexMetadataFromImageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexPhysicalSizeFromImageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexRadiusFromImageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexValueFromImageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SubdivideFilamentEdges

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.overlay.SetOverlayFilamentsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.RemoveDuplicateVerticesAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.SimplifyFilamentsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.SmoothFilamentsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.split.SplitFilamentsIntoConnectedComponentsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.split.SplitFilamentsIntoCyclesAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijocr.nodes.TesseractOCRAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertTracksToRoiNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotDetectorNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors.CreateSpotTrackerNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.MeasureSpotsNode

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.MergeSpotsNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SplitSpotsNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SpotDetectorNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SpotFilterNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SpotsToRGBNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.MeasureBranchesNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.MeasureEdgesNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.MeasureTracksNode

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.MergeTracksNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.SplitTracksNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.TrackFilterNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.TrackingNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.TrackSchemeRendererNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.TracksToRGBNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.ImportWekaModelFromFileAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaClassification2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaClassification3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingLabels2DAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingLabels2DAlgorithm2

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingMask2DAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingMask2DAlgorithm2

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingROI2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingROI3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.ExportIlastikHDF5ImageAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.ImportIlastikHDF5ImageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.ImportIlastikModel

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.algorithms.CreateIJ2OutOfBoundsFactoryAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.algorithms.CreateIJ2ShapeAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.ImageJ2OpNode

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnnotateByImageStatisticsExpressionAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.BinarizeAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.BitwiseLogicalOperationAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConditionalInverterAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConvexifyAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.DistanceTransformWatershed2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.KeepLargestRegionAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.RemoveLargestRegionAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.UltimateErodedPoints2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.VolumeOpening2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.VolumeOpening3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.Voronoi2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.BoxFilter2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.GaussianBlur2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurFilter2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurGreyscale8U2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurRGB2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.CopyPhysicalDimensionsBetweenImagesAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.BlendImagesAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.ColorToGreyscaleExpression2D

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.CombineChannelsToRGBAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.InvertColorsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeChannelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeHSBChannelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeLABChannelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeRGBChannelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.OverlayImagesAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.RenderImageToRGBAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitRGBChannelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.IlluminationCorrection2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.ImageJContrastEnhancerAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo16BitAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo16BitAutoContrastAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo32BitAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo8BitAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo8BitAutoContrastAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageToHSBAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageToLABAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageToRGBAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ImageToMatrixAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ImageToTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ImageToTableColumnAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.MatrixToImageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.MultipleImagesToTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableColumnToImageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableToImageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve.ConvolveByImage2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve.ConvolveByParameter2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.OMEImageFromImagePlus

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.FastCircularHoughSegmentation2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LinesHoughDetection2DAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.CreateStackAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.Merge2DToHyperstackAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ReorderHyperstackSlicesExpressionAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ResliceAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackCombinerAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackInverterAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackToDimensionMerger2Algorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackToDimensionMergerAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.SobelEdgeDetectorAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.AlternatingMorphologicalFilters2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DerivativesFeaturesAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.FrangiVesselnessFeatures

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.HessianFeatureAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LaplacianOfGaussian2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalFeatureContrast2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalTextureContrast2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.StructureFeatureAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFT2DForwardTransform

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFT2DInverseTransform

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFT2DSwapQuadrants

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTCustomFilter

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateStructureElement2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateStructureElement3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateZeroImage

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.ImageFromMatrix2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImage2Algorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm2

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm2

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm

Deprecated.

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ImagePlusFromGUI

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ImagePlusToGUI

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ResultsTableFromGUI

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ResultsTableToGUI

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ROIFromGUI

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ROIToGUI

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.RunImageJExporterAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.RunImageJImporterAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.CropLabelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.DilateLabelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ExpandLabelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ExtractLabelStatisticsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByIdAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByMaskAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByThicknessAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.RemoveBorderLabelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.RemoveLargestLabelAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.GetLabelBoundariesAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.KeepLargestLabelAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToMaskAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToRGBAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.OverlapMeasureLabelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.RemapLabelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ReplaceLabelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.SeparateLabelsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.SeparateTouchingLabels2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.SplitLabelsConnectedComponents2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.ApplyLUTAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.LUTInverterAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.RemoveLUTAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorMapAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromImageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.MacroWrapperAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking.SetToColorAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking.SetToContentAwareAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking.SetToValueAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyColorMathExpression2DExpression

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyMathExpression2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyTransform2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ApplyDistanceTransform2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.GeodesicDistanceMap2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.LabelChamferDistanceMap3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.DivideByMaximumAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.FastImageArithmeticsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateFromMathExpression2D

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.Hessian2DAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageCalculator2DExpression

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyApplyMath2DAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DAlgorithm

Deprecated.

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DMergingAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMaxima2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMaxima3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMinima2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMinima3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ImposeMaxima2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ImposeMaxima3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMaximumFilter2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMinimumFilter2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalVarianceFilter2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMaxima2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMaxima3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMinima2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMinima3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.RemoveNaNFilter2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.RoundFloatImageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata.ChangeImageMetadataFromExpressionsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata.ExtractImageMetadataAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata.RemoveImageMetadataAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata.SetImageMetadataFromTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc.DataToPreviewAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc.RenderJIPipeProjectAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage2

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.MontageToStackAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontage2Algorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.FindHoles2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologicalReconstruction2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologicalReconstruction3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyFillHoles2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyInternalGradient2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyOutline2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologySkeletonize2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologySkeletonize3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.AddNoise2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.AddSaltAndPepperNoise2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.DespeckleFilter2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.ExtractOMEROIAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.ExtractOMEXMLAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.ExtractOverlayAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RemoveOverlayAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.SetOverlayAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DReferencedAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DSingleAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.GetRoiImageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawOvalRoiAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsScriptAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.RemoveBorderRoisAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.SliceROIListAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.AppendRectangularRoiAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.MaskToRoiAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.ReferencedAppendRectangularRoiAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.ReferencedDefineRectangularRoiAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.CountROIAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractROIProfileAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge.FilterAndMergeRoiByStatisticsScriptAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge.MergeRoiListsOrderedAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge.MergeRoiListsPairwiseOrAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge.MergeRoiListsUnorderedAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByNameAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.EnlargeShrinkRoiAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.FlattenRoiAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.OutlineRoiAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.OutlineRoiConcaveHullMoreiraSantosAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ReorderRoiDimensionsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiCalculatorAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiToCentroidAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RotateRoiAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ScaleRoiAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.SetRoiImageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.UnsetRoiImageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.ExtractROIMetadataAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.RemoveROIMetadataAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetROIMetadataFromTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.register.RegisterRoiToImageByBrightnessAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.ExplodeRoiAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.sharpen.LaplacianSharpen2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.HistogramGenerator

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ColorThresholdExpression2D

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.PercentileThreshold8U2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ThresholdByAnnotation2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromExpressionsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromRoiAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.MergeImagesAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformFlip2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.Warp2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.ApplyDisplayContrastAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color.ColorSpaceConverterAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.ExtractRoi2DFromOMEImageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsExporter2Algorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsExporterAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImageJSampleAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImagePlusAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportLUTAsRGBFromFileAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportOMEZARRFromURIAsImagePlusAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportOMEZARRFromZipDirectoryAsImagePlusAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportResultsTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportRoi2DAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.SetBioFormatsExporterSettings

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.ImageTypeConverter

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imp.nodes.ConvertImpImageToImagePlusAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imp.nodes.ExportImpImageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imp.nodes.ImportImpImageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imp.nodes.SetImpAlphaChannelAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imp.nodes.SplitImpAlphaChannelAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.AnnotationsToParametersAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.ConvertParametersToTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromGlobalParametersAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.MergeParametersAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.ParametersToAnnotationsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROPlateReferenceAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMERODatasetReferenceDataSource

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROGroupReferenceDataSource

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROImageReferenceDataSource

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROPlateReferenceDataSource

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROProjectReferenceDataSource

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROScreenReferenceDataSource

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROWellReferenceDataSource

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROImageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.manage.OMEROCreateDatasetAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListDatasetImagesAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListDatasetsAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListGroupsAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListPlatesAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListProjectsAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListScreensAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListWellImagesAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListWellsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROImageToDatasetAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.ImportPretrainedOmnipose0ModelAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.ConvertDepthAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.ConvertTypeAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.filters.BilateralFilterAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaborKernelGenerator

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaussianKernelGenerator

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.InpaintingAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2Algorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTablesAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.IteratingJythonScriptAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.MergingJythonScriptAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.SimpleIteratingJythonScriptAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.IteratingPythonScriptAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.MergingPythonScriptAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.r.algorithms.ImportRDatasetAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.r.algorithms.IteratingRScriptAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.r.algorithms.MergingRScriptAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.CreateLineMeshAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.CreateSphereMeshAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm2

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.GroupSceneAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.MaskTo3DMeshAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.MergeScenesAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.datasources.ImportJsonAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.datasources.ImportStringAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.datasources.ImportXMLAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.datasources.StringDefinitionDataSource

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.AnnotateWithJsonDataAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.ExtractJsonDataAsTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.ExtractTextFromJsonAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.AnnotateWithTextDataAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.ProcessTextDataAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.TableToCSVTextAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.TextDataToTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.AnnotateWithXPathDataAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractTextFromXMLAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.PrettifyXMLAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AddAnnotationColumnsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateDataWithTableValues

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.ConvertAnnotationTableToAnnotatedTables

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ApplyExpressionToColumnsAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ApplyExpressionToTableByColumnAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnsToAnnotationsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnToNumericAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnToStringAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ConvertColumnsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RemoveColumnAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameSingleColumnsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumns2Algorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumnsAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.SortTableColumnsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.filter.FilterTableRowsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.filter.FilterTablesAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.filter.SliceTableRowsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.GenerateColumnAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.GenerateTableFromExpressionAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.IntegrateColumnsAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeColumnsAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSimpleAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementMergingAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableRowsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.ModifyTableColumnNamesAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.ModifyTablesScript

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.SortTableRowsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableByColumnsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableIntoColumnsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableIntoRowsAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.MeltTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.UnMeltTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.ConverterAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.AnnotateWithDataTableProperties

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.MergeDataToTableAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PullDataTableAnnotations

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PushDataTableAnnotations

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.distribute.DistributeDataRandomlyByCountAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.distribute.DistributeDataRandomlyByPercentageAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.DuplicateDataAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.ImportJIPipeSlotFolderAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.CrasherAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.IterationStepSlicer

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.PathsToJIPipeProjectParametersAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.RunJIPipeProjectAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessIteratingAlgorithm

runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessMergingAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.RunExpressionAlgorithm

runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.ToDataStringAlgorithm

RunJIPipeNodeMain - Class in org.hkijena.jipipe.desktop

RunJIPipeNodeMain() - Constructor for class org.hkijena.jipipe.desktop.RunJIPipeNodeMain

RunJIPipeProjectAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms.meta

Runs a JIPipe project

RunJIPipeProjectAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.meta.RunJIPipeProjectAlgorithm

RunJIPipeProjectAlgorithm(RunJIPipeProjectAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.meta.RunJIPipeProjectAlgorithm

runNapari(PythonEnvironment, List<String>, boolean, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.napari.NapariPlugin

Runs Napari

RunNapariDesktopMenuExtension - Class in org.hkijena.jipipe.plugins.napari

RunNapariDesktopMenuExtension(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.napari.RunNapariDesktopMenuExtension

Creates a new instance

runOnImage(ImagePlus, String, Object...) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Runs a command on an ImageJ image

runOnImage(ImagePlus, PlugIn, Object...) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Runs a command on a copy of an ImageJ image

runOnNewImage(ImagePlus, String, Object...) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Runs a command on a copy of an ImageJ image

runOnNewImage(ImagePlus, PlugIn, Object...) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Runs a command on a copy of an ImageJ image

RunOptionListCellRenderer() - Constructor for class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunNextWindow.RunOptionListCellRenderer

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

Runs a parameter set iteration

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithAnnotationTable

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.GenerateRandomUniqueAnnotation

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveArrayAnnotationsAlgorithm

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveNAAnnotationColumnsAlgorithm

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelIterating

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelSimpleIterating

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.TemporaryFileDataSource

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.TemporaryFolderDataSource

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.ExportROI3DAlgorithm

Deprecated.

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawMaskAlgorithm

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawROIAlgorithm

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm

Deprecated.

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm

Deprecated.

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.CountROIAlgorithm

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsExporterAlgorithm

Deprecated.

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.JythonScriptAlgorithm

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.PythonScriptAlgorithm

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm

Deprecated.

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.DataSlicer

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.ExtractTableAlgorithm

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.SelectDataTableRowsAlgorithm

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.SleepAlgorithm

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.SortRowsByAnnotationsAlgorithm

runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.SortRowsByExpressionAlgorithm

runPassThrough(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compartments.algorithms.IOInterfaceAlgorithm

runPassThrough(JIPipeProgressInfo, JIPipeSingleIterationStep) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm

A pass-through variant for iterating algorithms.

runPassThrough(JIPipeProgressInfo, JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

A pass-through variant for merging algorithms.

runPassThrough(JIPipeProgressInfo, JIPipeSingleIterationStep) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

A pass-through variant for iterating algorithms.

runPassThrough(JIPipeProgressInfo, JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm

A pass-through variant for merging algorithms.

runPassThrough(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

Runs the pass through.

runPassThrough(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithAnnotationTable

runPassThrough(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.MergeAnnotations

runPassThrough(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

runPassThrough(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.CountROIAlgorithm

runProcess(ProcessEnvironment, JIPipeExpressionVariablesMap, Map<String, String>, boolean, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.ProcessUtils

Runs a process

RunProcessIteratingAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms.processes

RunProcessIteratingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessIteratingAlgorithm

RunProcessIteratingAlgorithm(RunProcessIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessIteratingAlgorithm

RunProcessMergingAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms.processes

RunProcessMergingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessMergingAlgorithm

RunProcessMergingAlgorithm(RunProcessMergingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessMergingAlgorithm

runProject(JIPipeProject, Path, int) - Static method in class org.hkijena.jipipe.JIPipe

Runs a project in the current thread.

runProject(JIPipeProject, JIPipeGraphRunConfiguration) - Static method in class org.hkijena.jipipe.JIPipe

Runs a project in the current thread.

runPython(String, PythonEnvironment, List<Path>, boolean, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

runPython(Path, PythonEnvironment, List<Path>, boolean, boolean, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

Runs a Python script file

runPython(String[], PythonEnvironment, List<Path>, Map<String, String>, boolean, boolean, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

Runs Python with a set of arguments

runR(String, REnvironment, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.r.RUtils

runR(Path, REnvironment, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.r.RUtils

runRegistrationTask(JsonExtensionRegistrationTask) - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionLoaderPlugin

Immediately runs a registration task.

runRegistrationTasks() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Attempts to run registration tasks that have registered dependencies

RunSetsModifiedEvent(JIPipeProjectRunSetsConfiguration) - Constructor for class org.hkijena.jipipe.api.project.JIPipeProjectRunSetsConfiguration.RunSetsModifiedEvent

RunSetsModifiedEventEmitter() - Constructor for class org.hkijena.jipipe.api.project.JIPipeProjectRunSetsConfiguration.RunSetsModifiedEventEmitter

runtimePartitionEquals(JIPipeGraphNode, JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun

RuntimePartitionReferenceDesktopParameterEditorUI - Class in org.hkijena.jipipe.api.runtimepartitioning

RuntimePartitionReferenceDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceDesktopParameterEditorUI

RuntimePartitionReferenceParameter - Class in org.hkijena.jipipe.api.runtimepartitioning

RuntimePartitionReferenceParameter() - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceParameter

RuntimePartitionReferenceParameter(int) - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceParameter

RuntimePartitionReferenceParameter(RuntimePartitionReferenceParameter) - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceParameter

runUpdateCache(JIPipeGraphNode) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

runUpdateCacheLater(JIPipeGraphNode) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

runWholeProject() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

RUtils - Class in org.hkijena.jipipe.plugins.r

RUtils() - Constructor for class org.hkijena.jipipe.plugins.r.RUtils

S

safeJsonify(String) - Static method in class org.hkijena.jipipe.utils.StringUtils

Removes all spaces, and filesystem-unsafe characters from the string and replaces them with dashes Duplicate dashes are removed

sameChannel(int) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

sameFrame(int) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

Sauvola(ImageProcessor, int, double, double, boolean) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm

SauvolaLocalAutoThreshold2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local

Segmenter node that thresholds via an auto threshold Based on code from fiji.threshold.Auto_Local_Threshold

SauvolaLocalAutoThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm

SauvolaLocalAutoThreshold2DAlgorithm(SauvolaLocalAutoThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm

Copies the algorithm

save(Path) - Method in class org.hkijena.jipipe.api.registries.JIPipeApplicationSettingsRegistry

Saves the settings to the specified file

save() - Method in class org.hkijena.jipipe.api.registries.JIPipeApplicationSettingsRegistry

Saves the settings to the default settings file

save(Path) - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

Saves the settings to the specified file

save() - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

Saves the settings to the default settings file

save() - Method in class org.hkijena.jipipe.api.registries.JIPipeRecentProjectsRegistry

save(Path) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

save(Path) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Saves the ROI list into the selected path

saveAsCSV(Path) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

Saves the table to CSV

saveAsCSV(Path) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Saves the table as CSV

saveAsJson(Path) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

Saves the table to JSON

saveAsXLSX(Path) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Saves the table as Excel file

saveDataAnnotationRow_(JIPipeWriteDataStorage, JIPipeProgressInfo, int, List<Dimension>, JIPipeProgressInfo, JIPipeDataAnnotation, Map<String, String>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

NOT THREAD-SAFE

saveDirectory(Component, JIPipeWorkbench, JIPipeFileChooserApplicationSettings.LastDirectoryKey, String, HTMLText) - Static method in class org.hkijena.jipipe.desktop.JIPipeDesktop

Lets the user choose a directory

saveDockStateToSettings() - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmSettingsPanelIOEditor

saveDockStateToSettings() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

saveDockStateToSettings() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.JIPipeDesktopCompartmentsGraphEditorUI

saveDockStateToSettings() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.JIPipeDesktopPipelineGraphEditorUI

saveFile(Component, JIPipeWorkbench, JIPipeFileChooserApplicationSettings.LastDirectoryKey, String, HTMLText, FileNameExtensionFilter...) - Static method in class org.hkijena.jipipe.desktop.JIPipeDesktop

Lets the user choose a file

saveInputImages(JIPipeInputDataSlot, Set<Integer>, boolean, boolean, Path, Path, List<CellposeImageInfo>, List<CellposeImageInfo>, JIPipeGraphNode, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.cellpose.utils.CellposeUtils

saveLater() - Method in class org.hkijena.jipipe.api.registries.JIPipeApplicationSettingsRegistry

saveObjectsToStream(OutputStream, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

saveObjectToStream(OutputStream) - Method in class org.hkijena.jipipe.plugins.ij3d.utils.ExtendedObject3DVoxels

Saves the voxels to a stream

saveParameterFile(Path) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

saveParametersDesktopQuickAction(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

savePath(Component, JIPipeWorkbench, JIPipeFileChooserApplicationSettings.LastDirectoryKey, String, HTMLText, FileNameExtensionFilter...) - Static method in class org.hkijena.jipipe.desktop.JIPipeDesktop

Lets the user choose a file or directory

saveProject(Path) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Saves the project

saveProject(Writer) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Saves the project

saveProject(OutputStream) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Saves the project

saveProject(Path) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

Saves the extension

saveProjectAndCache(String, boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

saveProjectAndCacheToDirectory(String, boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

Saves the project and cache

saveProjectAndCacheToDirectory(String, boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

saveProjectAndCacheToZIP(String) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

Saves the project and cache

saveProjectAndCacheToZIP(String) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

saveProjectAs(boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

Saves the project

saveResults(ImageStatistics, Roi) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Saves the measurements specified in the "Set Measurements" dialog, or by calling setMeasurements(), in the default results table.

saveROIs(MetadataStore, ROI2DListData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIHandler

Save ROIs in the ROI manager to the given MetadataStore.

saveSingleRoi(Roi, Path) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Saves a single ROI to a file

saveToFile(Object, Path) - Static method in class org.hkijena.jipipe.utils.json.JsonUtils

saveToJson(Path) - Method in class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment

Saves the exported compartment to JSON

saveToRoiOrZip(Path) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Saves all ROIs in this list as *.roi or *.zip file depending on how many ROIs are stored in the list If the extension of the output file is .zip and there is one ROI in the list, the output will still be saved as zip!

saveToXLSXSheet(Sheet) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Saves the table data to an Excel sheet

saveToZip(Path) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Saves all ROIs in this list as ZIP file

saveTransformation(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformer

Save the current landmarks into a text file and return the path and name of the file.

scalarProduct(List<Double>, List<Double>) - Static method in class org.hkijena.jipipe.utils.VectorUtils

scale(double, double, boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Scales the ROI in this list and returns a new list containing the scaled instances Does not change the ROIs in this list

ScaleBarGenerator - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration

Copy of ScaleBar where extended access to parameters is given

ScaleBarGenerator(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator

ScaleBarGenerator.ScaleBarConfiguration - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration

ScaleBarGenerator.ScaleBarPosition - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration

scaleHSV(Color, float, float, float) - Static method in class org.hkijena.jipipe.utils.ColorUtils

Applies scaling in HSV space

scaleImageToFit(BufferedImage, int, int) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils

ScaleMode - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

scaleProcessor(ImageProcessor, int, int, InterpolationMethod, boolean, ScaleMode, Anchor, Color) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

ScaleRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Wrapper around RoiManager

ScaleRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ScaleRoiAlgorithm

Instantiates a new node type.

ScaleRoiAlgorithm(ScaleRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ScaleRoiAlgorithm

ScatterXYJFreeChartPlotData - Class in org.hkijena.jipipe.plugins.plots.datatypes

A scatter XY plot Series table columns: X (Double), Y (Double) Multiple series: Yes

ScatterXYJFreeChartPlotData() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.ScatterXYJFreeChartPlotData

Creates a new instance

ScatterXYJFreeChartPlotData(ScatterXYJFreeChartPlotData) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.ScatterXYJFreeChartPlotData

Creates a copy

Scene3DData - Class in org.hkijena.jipipe.plugins.scene3d.datatypes

Scene3DData() - Constructor for class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

Scene3DData(Scene3DData) - Constructor for class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

Scene3DGeometry - Interface in org.hkijena.jipipe.plugins.scene3d.model

Scene3DGroupNode - Class in org.hkijena.jipipe.plugins.scene3d.model

Scene3DGroupNode() - Constructor for class org.hkijena.jipipe.plugins.scene3d.model.Scene3DGroupNode

Scene3DGroupNode(Scene3DGroupNode) - Constructor for class org.hkijena.jipipe.plugins.scene3d.model.Scene3DGroupNode

Scene3DIndexedMeshGeometry - Class in org.hkijena.jipipe.plugins.scene3d.model.geometries

Scene3DIndexedMeshGeometry(float[], float[], int[], int[]) - Constructor for class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DIndexedMeshGeometry

Creates a mesh object

Scene3DIndexedMeshGeometry(Scene3DIndexedMeshGeometry) - Constructor for class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DIndexedMeshGeometry

Scene3DLineGeometry - Class in org.hkijena.jipipe.plugins.scene3d.model.geometries

Scene3DLineGeometry() - Constructor for class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry

Scene3DLineGeometry(Scene3DLineGeometry) - Constructor for class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry

Scene3DLineGeometry.LineEndPoint - Class in org.hkijena.jipipe.plugins.scene3d.model.geometries

Scene3DMeshGeometry - Interface in org.hkijena.jipipe.plugins.scene3d.model.geometries

Scene3DNode - Interface in org.hkijena.jipipe.plugins.scene3d.model

A node in the 3D scene

Scene3DPlugin - Class in org.hkijena.jipipe.plugins.scene3d

Scene3DPlugin() - Constructor for class org.hkijena.jipipe.plugins.scene3d.Scene3DPlugin

Scene3DSphereGeometry - Class in org.hkijena.jipipe.plugins.scene3d.model.geometries

Scene3DSphereGeometry() - Constructor for class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

Scene3DSphereGeometry(Scene3DSphereGeometry) - Constructor for class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

Scene3DToColladaExporter - Class in org.hkijena.jipipe.plugins.scene3d.utils

Scene3DToColladaExporter(Scene3DData, Path) - Constructor for class org.hkijena.jipipe.plugins.scene3d.utils.Scene3DToColladaExporter

Scene3DUnindexedMeshGeometry - Class in org.hkijena.jipipe.plugins.scene3d.model.geometries

Scene3DUnindexedMeshGeometry(float[], float[]) - Constructor for class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DUnindexedMeshGeometry

Creates a mesh object

Scene3DUnindexedMeshGeometry(Scene3DUnindexedMeshGeometry) - Constructor for class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DUnindexedMeshGeometry

Scene3DUtils - Class in org.hkijena.jipipe.plugins.scene3d.utils

Scene3DUtils() - Constructor for class org.hkijena.jipipe.plugins.scene3d.utils.Scene3DUtils

schedule(Runnable) - Method in class org.hkijena.jipipe.api.JIPipeFixedThreadPool

Schedules a runnable

scheduleActivatePlugin(String) - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

scheduleBatches(List<Runnable>, int) - Method in class org.hkijena.jipipe.api.JIPipeFixedThreadPool

Schedules multiple tasks at once, split into batches.

ScheduledActivatePluginEvent(JIPipePluginRegistry, String) - Constructor for class org.hkijena.jipipe.api.registries.JIPipePluginRegistry.ScheduledActivatePluginEvent

ScheduledActivatePluginEventEmitter() - Constructor for class org.hkijena.jipipe.api.registries.JIPipePluginRegistry.ScheduledActivatePluginEventEmitter

ScheduledDeactivatePluginEvent(JIPipePluginRegistry, String) - Constructor for class org.hkijena.jipipe.api.registries.JIPipePluginRegistry.ScheduledDeactivatePluginEvent

ScheduledDeactivatePluginEventEmitter() - Constructor for class org.hkijena.jipipe.api.registries.JIPipePluginRegistry.ScheduledDeactivatePluginEventEmitter

scheduleDeactivatePlugin(String) - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

scheduleRegister(JIPipeNodeRegistrationTask) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Schedules registration after all dependencies of the registration task are satisfied

scheduleRegisterExample(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

scheduleRegisterJsonExtension(Path, JsonNode) - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionLoaderPlugin

Schedules the registration of an extension Invalid JSON data is skipped

scheduleRegisterTemplate(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

sciJavaToJogAmp(List<Point3f>) - Static method in class org.hkijena.jipipe.plugins.ij3d.IJ3DUtils

score - Variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines.HoughLine

ScoreParameters() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ScoreParameters

ScoreParameters(IterativeThresholdByROIStatistics2DAlgorithm.ScoreParameters) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ScoreParameters

ScreenImage - Class in org.hkijena.jipipe.utils.ui

Convenience class to create and optionally save to a file a BufferedImage of an area on the screen.

ScreenImage() - Constructor for class org.hkijena.jipipe.utils.ui.ScreenImage

ScreenImageSVG - Class in org.hkijena.jipipe.utils.ui

Convenience class to create and optionally save to a file a BufferedImage of an area on the screen.

ScreenImageSVG() - Constructor for class org.hkijena.jipipe.utils.ui.ScreenImageSVG

screenToImageCoordinate(Point, boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

Converts screen coordinates into image pixel coordinates

screenToImageSubPixelCoordinate(Point, boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

Converts screen coordinates into image pixel coordinates

ScriptDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.api.scripts

Parameter editor for ScriptParameter

ScriptDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI

ScriptDesktopParameterEditorUI.ExternalEditor - Class in org.hkijena.jipipe.plugins.parameters.api.scripts

ScriptDesktopParameterEditorUI.ExternalFileExternalEditor - Class in org.hkijena.jipipe.plugins.parameters.api.scripts

ScriptDesktopParameterEditorUI.TabExternalEditor - Class in org.hkijena.jipipe.plugins.parameters.api.scripts

ScriptDesktopParameterEditorUI.WindowExternalEditor - Class in org.hkijena.jipipe.plugins.parameters.api.scripts

ScriptParameter - Class in org.hkijena.jipipe.plugins.parameters.api.scripts

A parameter that contains some kind of script

ScriptParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptParameter

Creates a new empty code

ScriptParameter(ScriptParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptParameter

Copies the code

scrollToAlgorithm(JIPipeDesktopGraphNodeUI) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

Scrolls to the specified algorithm UI

seal() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Seals input and output

sealInput() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Seals input

sealOutput() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Seals output

searchClosestCompatibleArtifactFromQuery(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry

Given a glob-like query, looks for the closest, newest artifact that matches it

SECONDARY1 - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

SECONDARY1 - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

SECONDARY2 - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

SECONDARY2 - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

SECONDARY3 - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

SECONDARY3 - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

SeededWatershedSegmentationAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment

SeededWatershedSegmentationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm

SeededWatershedSegmentationAlgorithm(SeededWatershedSegmentationAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm

SeedSegmentationSettings - Class in org.hkijena.jipipe.plugins.ij3d.nodes.segmentation

SeedSegmentationSettings() - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SeedSegmentationSettings

SeedSegmentationSettings(SeedSegmentationSettings) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SeedSegmentationSettings

SELECT_ALL_OUTPUTS - Static variable in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI

selectAll() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

SelectAllNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

SelectAllNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SelectAllNodeUIContextAction

SelectAndMoveNodeHereNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

SelectAndMoveNodeHereNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SelectAndMoveNodeHereNodeUIContextAction

selectBestThumbnail(Dimension) - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata

Selects the best fitting thumbnail entry with respect to the size

selectColor - Variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

SelectCondaEnvPythonInstaller - Class in org.hkijena.jipipe.plugins.python.installers

SelectCondaEnvPythonInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.plugins.python.installers.SelectCondaEnvPythonInstaller

SelectCondaEnvPythonInstaller.Configuration - Class in org.hkijena.jipipe.plugins.python.installers

selectDataSlot(JIPipeDataSlot) - Method in class org.hkijena.jipipe.desktop.app.cache.cachetree.JIPipeDesktopCacheTreePanel

Selects a node by state and slot

SelectDataTableRowsAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms

SelectDataTableRowsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.SelectDataTableRowsAlgorithm

SelectDataTableRowsAlgorithm(SelectDataTableRowsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.SelectDataTableRowsAlgorithm

selectDefaultTool() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

SelectedDataTypesChangedEvent(JIPipeDesktopDataTypePicker) - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.SelectedDataTypesChangedEvent

SelectedDataTypesChangedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.SelectedDataTypesChangedEventEmitter

SelectedInfosChangedEvent(JIPipeDesktopNodeInfoPicker) - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.SelectedInfosChangedEvent

SelectedInfosChangedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.SelectedInfosChangedEventEmitter

selectFilePathDesktopQuickAction(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter2

selectFilePathDesktopQuickAction(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.ExportROI3DAlgorithm2

selectFilePathDesktopQuickAction(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.ExportIlastikHDF5ImageAlgorithm

selectFilePathDesktopQuickAction(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImage2Algorithm

selectFilePathDesktopQuickAction(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm2

selectFilePathDesktopQuickAction(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm2

selectFilePathDesktopQuickAction(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2

selectFilePathDesktopQuickAction(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsExporter2Algorithm

selectFilePathDesktopQuickAction(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.plugins.imp.nodes.ExportImpImageAlgorithm

selectFilePathDesktopQuickAction(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm2

selectHighlight - Variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

SelectionContextPanel(FilamentsManagerPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D.SelectionContextPanel

SelectionContextPanel(SpotsManagerPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D.SelectionContextPanel

SelectionContextPanel(TracksManagerPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D.SelectionContextPanel

SelectionInfoContextPanel(FilamentsManagerPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D.SelectionInfoContextPanel

SelectionInfoContextPanel(SpotsManagerPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D.SelectionInfoContextPanel

SelectionInfoContextPanel(TracksManagerPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D.SelectionInfoContextPanel

selectionIsAlignCenter() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

selectionIsAlignJustified() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

selectionIsAlignLeft() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

selectionIsAlignRight() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

selectionIsBold() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

selectionIsItalic() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

selectionIsStrikeThrough() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

selectionIsSubscript() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

selectionIsSuperscript() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

selectionIsUnderline() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

selectionUpdated(ROI3DListData, List<ROI3D>) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3DInfoContextPanel

selectionUpdated(ROI3DListData, List<ROI3D>) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3DSelectionContextPanel

selectionUpdated(List<Filaments3DGraphData>, List<Filaments3DGraphData>) - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D.SelectionContextPanel

selectionUpdated(List<Filaments3DGraphData>, List<Filaments3DGraphData>) - Method in class org.hkijena.jipipe.plugins.ijfilaments.display.FilamentsManagerPlugin2D.SelectionInfoContextPanel

selectionUpdated(SpotsCollectionData, List<Spot>) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D.SelectionContextPanel

selectionUpdated(SpotsCollectionData, List<Spot>) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D.SelectionInfoContextPanel

selectionUpdated(TrackCollectionData, List<Integer>) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D.SelectionContextPanel

selectionUpdated(TrackCollectionData, List<Integer>) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D.SelectionInfoContextPanel

selectionUpdated(ROI2DListData, List<Roi>) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2DInfoContextPanel

selectionUpdated(ROI2DListData, List<Roi>) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2DSelectionContextPanel

selectItem(T) - Method in class org.hkijena.jipipe.desktop.app.documentation.JIPipeDesktopCompendiumUI

Displays the documentation of the specified algorithm

selectItemsInJList(JList<T>, List<T>) - Static method in class org.hkijena.jipipe.utils.UIUtils

selectMulti(Component, JIPipeWorkbench, JIPipeFileChooserApplicationSettings.LastDirectoryKey, String, HTMLText, PathIOMode, PathType, FileNameExtensionFilter...) - Static method in class org.hkijena.jipipe.desktop.JIPipeDesktop

Generic open method for multiple paths.

selectNode(String) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopApplicationSettingsUI

selectNode(String) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectSettingsUI

selectNode(Object) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterKeyPickerUI

selectOnly(JIPipeDesktopGraphNodeUI) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

Selects only the specified algorithm

selectOnly(JIPipeDesktopGraphNodeUI) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

Selects only the specified algorithm

selectOutput(String) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopAlgorithmCacheBrowserOutputSelectorUI

Selects an output

selectOutputDirectoryDesktopQuickAction(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm

selectOutputZipDesktopQuickAction(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm

selectPreferredArtifactByClassifier(List<JIPipeArtifact>) - Static method in class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry

Selects a preferred artifact by class

selectSingle(Component, JIPipeWorkbench, JIPipeFileChooserApplicationSettings.LastDirectoryKey, String, HTMLText, PathIOMode, PathType, FileNameExtensionFilter...) - Static method in class org.hkijena.jipipe.desktop.JIPipeDesktop

Generic open/save method for single paths

selectSingletonTab(String) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Re-opens or selects a singleton tab

SelectSystemPythonInstaller - Class in org.hkijena.jipipe.plugins.python.installers

SelectSystemPythonInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.plugins.python.installers.SelectSystemPythonInstaller

SelectSystemPythonInstaller.Configuration - Class in org.hkijena.jipipe.plugins.python.installers

selectTask(String) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon

selectTool(JIPipeGraphEditorTool) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

SelectVirtualEnvPythonInstaller - Class in org.hkijena.jipipe.plugins.python.installers

SelectVirtualEnvPythonInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.plugins.python.installers.SelectVirtualEnvPythonInstaller

SelectVirtualEnvPythonInstaller.Configuration - Class in org.hkijena.jipipe.plugins.python.installers

sendSelectionToBackground(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

sendSelectionToForeground(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

sendStatusBarText(String) - Method in interface org.hkijena.jipipe.api.JIPipeWorkbench

Sends a text to the status bar

sendStatusBarText(String) - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

sendStatusBarText(String) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

Sends a text to the status bar

sendStatusBarText(String) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDummyWorkbench

SendToBackgroundUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

SendToBackgroundUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SendToBackgroundUIContextAction

SendToForegroundUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

SendToForegroundUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SendToForegroundUIContextAction

sendTrayNotification(String, String, TrayIcon.MessageType) - Static method in class org.hkijena.jipipe.utils.UIUtils

SeparateLabelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

SeparateLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.SeparateLabelsAlgorithm

SeparateLabelsAlgorithm(SeparateLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.SeparateLabelsAlgorithm

SeparateTouchingLabels2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

SeparateTouchingLabels2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.SeparateTouchingLabels2DAlgorithm

SeparateTouchingLabels2DAlgorithm(SeparateTouchingLabels2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.SeparateTouchingLabels2DAlgorithm

SEPARATOR - Static variable in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeUIContextAction

Indicates that a separator is created

SequenceFunction - Class in org.hkijena.jipipe.plugins.expressions.functions

SequenceFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.SequenceFunction

SerializationUtils - Class in org.hkijena.jipipe.utils

Utils for serializing objects

SerializationUtils() - Constructor for class org.hkijena.jipipe.utils.SerializationUtils

serialize(JIPipeExportedCompartment, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment.Serializer

serialize(JIPipeDataInfo, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo.Serializer

serialize(JIPipeDataSlotInfo, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Serializer

serialize(JIPipeSlotConfiguration, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.data.JIPipeSlotConfiguration.Serializer

serialize(JIPipeSerializedParameterCollectionData, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData.Serializer

serialize(NodeGroupContents, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents.Serializer

serialize(JIPipeEmptyNodeInfo, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo.Serializer

serialize(JIPipeJavaNodeInfo, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo.Serializer

serialize(JIPipeGraph, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.Serializer

serialize(JIPipeGraphNode, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.Serializer

serialize(JIPipeProject, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.project.JIPipeProject.Serializer

serialize(JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage.Serializer

serialize(JIPipeExpressionParameter, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameter.Serializer

serialize(FormData, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.FormData.Serializer

serialize(Filaments3DGraphData, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDataSerializer

serialize(WekaClassifierParameter, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.WekaClassifierParameter.Serializer

serialize(ParametersData, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersData.Serializer

serialize(ListParameter<?>, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameter.Serializer

serialize(FunctionParameter<?, ?, ?>, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter.Serializer

serialize(Matrix2D<?>, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D.Serializer

serialize(OptionalParameter<?>, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameter.Serializer

serialize(PairParameter<?, ?>, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameter.Serializer

serialize(PasswordParameter, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.library.auth.PasswordParameter.Serializer

serialize(ParameterCollectionList, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.library.collections.ParameterCollectionList.Serializer

serialize(Color, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.library.colors.ColorSerializer

serialize(ImageParameter, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.library.images.ImageParameter.Serializer

serialize(DynamicCategoryEnumParameter, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicCategoryEnumParameter.Serializer

serialize(DynamicDataDisplayOperationIdEnumParameter, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter.Serializer

serialize(DynamicDataImportOperationIdEnumParameter, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter.Serializer

serialize(HTMLText, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLText.Serializer

serialize(DynamicStringEnumParameter, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.DynamicStringEnumParameter.Serializer

serialize(FontFamilyParameter, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.FontFamilyParameter.Serializer

serialize(IconRef, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.IconRef.Serializer

serialize(ImageJDataExporterRef, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExporterRef.Serializer

serialize(ImageJDataImporterRef, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImporterRef.Serializer

serialize(JIPipeDataInfoRef, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRef.Serializer

serialize(JIPipeNodeInfoRef, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeNodeInfoRef.Serializer

serialize(JIPipeParameterTypeInfoRef, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeParameterTypeInfoRef.Serializer

serialize(Rectangle, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.RectangleSerializer

serialize(ParameterTable, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.Serializer

serialize(JFreeChartPlotData, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData.Serializer

serialize(JFreeChartPlotDataSeries, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotDataSeries.Serializer

serialize(ResultsTableData, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.Serializer

serializeParametersToJson(JIPipeParameterCollection, JsonGenerator) - Static method in class org.hkijena.jipipe.utils.ParameterUtils

Serializes parameters to JSON using a generator

serializeParametersToJson(JIPipeParameterCollection, JsonGenerator, Predicate<Map.Entry<String, JIPipeParameterAccess>>) - Static method in class org.hkijena.jipipe.utils.ParameterUtils

Serializes parameters to JSON using a generator

Serializer() - Constructor for class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataInfo.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.api.data.JIPipeSlotConfiguration.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.api.project.JIPipeProject.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameter.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.FormData.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.WekaClassifierParameter.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersData.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameter.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameter.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameter.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.auth.PasswordParameter.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.collections.ParameterCollectionList.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.images.ImageParameter.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicCategoryEnumParameter.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLText.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.DynamicStringEnumParameter.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.FontFamilyParameter.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.IconRef.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExporterRef.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImporterRef.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRef.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeNodeInfoRef.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeParameterTypeInfoRef.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotDataSeries.Serializer

Serializer() - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.Serializer

serializeToJsonFile(Path) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

Serializes this parameter collection to a JSON file

serializeToJsonGenerator(JsonGenerator) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

Serializes this parameter collection into a JsonGenerator

serializeToJsonString() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

Serializes this parameter collection to a JSON string

ServiceImageJ2ModuleIO - Class in org.hkijena.jipipe.plugins.imagej2.io

Dummy IO for service parameters

ServiceImageJ2ModuleIO() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.ServiceImageJ2ModuleIO

set(int, JIPipeDataTableRowInfo) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

set(T) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess

set(T) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess

set(T) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess

set(T) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

set(T) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess

Sets the parameter value

set(T) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

set(String, Object) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionVariablesMap

Sets a variable value.

set(U) - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameterItemParameterAccess

set(T) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterInputAccess

set(T) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterOutputAccess

set(T) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameterParameterAccess

set(U) - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameterContentAccess

set(T) - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterKeyAccess

set(T) - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameterValueAccess

set(T) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTableCellAccess

set(int, Scene3DNode) - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

set(String, Object) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.RowBuilder

set(int, Object) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData.RowBuilder

set3DFeatures(WekaSegmentation, Set<WekaFeature3D>) - Static method in class org.hkijena.jipipe.plugins.ijweka.WekaUtils

Reliably sets the 3D features

setAbove(boolean) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeatureFilterParameter

setAbove(boolean) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeatureFilterParameter

setAbsoluteCoordinates(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.Warp2DAlgorithm

setAccelerationPreference(JIPipeArtifactAccelerationPreference) - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

setAccelerationPreferenceVersions(Vector2iParameter) - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

setAcceptedDataType(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Sets the accepted slot type Please note that this method can cause issues when running the graph

setAcceptedDataTypeId(String) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

Sets the accepted datatype ID

setAccessor(OMEAccessorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm.Entry

setAccessor(OMEAccessorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm.Entry

setAccessorId(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OMEAccessorParameter

setAccessPixels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm

setAccessPixels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm

setAccessPixels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm

setAccessPixels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm

setAccessPixels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm

setAccessPixels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm

setAccumulationFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

setAccumulatorThreshold(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LinesHoughDetection2DAlgorithm

setAcknowledgements(JIPipeAuthorMetadata.List) - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

Sets the list of acknowledged authors

setAction(Consumer<JIPipeWorkbench>) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction

setActions(List<JIPipeNotificationAction>) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification

setActions(List<JIPipeParameterCollectionContextAction>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

setActions(List<JIPipeDesktopRibbon.Action>) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

setActivate(boolean) - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters

setActivate(OptionalBooleanParameter) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

setAddableAlgorithms(Set<JIPipeNodeInfo>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

setAddAcknowledgements(boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

setAddAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.CountROIAlgorithm

setAddAsAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableByColumnsAlgorithm

setAddAuthors(boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

setAddBorder(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm

setAddCitation(boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

setAddContextActionsToContextMenu(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

setAddDataToString(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ConvertToAnnotationTable

setAddDependencies(boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

setAddDependencyCitations(boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

setAddDescription(boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

setAddFileExtension(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

setAddGlobalParameters(boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

setAdditionalCitations(List<String>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo

setAdditionalCitations(List<String>) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

setAdditionalColumns(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

setAdditionalData(JsonNode) - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

setAdditionalFiles(List<Path>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail

setAdditionalMetadata(Map<String, JIPipeMetadataObject>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

setAdditionalMetadata(Map<String, JIPipeMetadataObject>) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

setAdditionalUIVariables(Set<JIPipeExpressionParameterVariableInfo>) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionParameter

setAddLastIdentityField(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm

setAddLastIdentityField(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm

setAddLastIdentityField(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm

setAddLicence(boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

setAddListOfUsedNodes(boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

setAddMetadata(StringAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SubdivideFilamentEdges

setAddNameToTable(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm

setAddPipelineTextDescription(boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

setAddSummary(boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

setAddTitle(boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

setAddUserDirectories(boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

setAddWebsite(boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectReportUI.ReportSettings

setAffiliations(StringList) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

setAliases(List<JIPipeNodeMenuLocation>) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

setAllChannels(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2ChannelSettings

setAllowCache(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

setAllowDefaultCollapsedParameters(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

setAllowedInputSlotTypes(Set<Class<? extends JIPipeData>>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

setAllowedOutputSlotTypes(Set<Class<? extends JIPipeData>>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

setAllowedTypes(Set<Class<?>>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Sets allowed parameter types

setAllowedValues(List<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicEnumParameter

setAllowedValues(Set<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetParameter

setAllowedValues(List<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetParameter

setAllowMerging(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings

setAllowSkipAlgorithmsWithoutInput(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

setAllowUserModification(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Enabled/disables if modification by users is allowed

setAlpha(double) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.EdgeFilter3DAlgorithm

setAlpha(double) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.SymmetryFilter3DAlgorithm

setAlpha(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

setAlpha(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures

setAlpha(int) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

setAlpha(BufferedImage, BufferedImage) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils

setAlpha(Color, int) - Static method in class org.hkijena.jipipe.utils.ColorUtils

setAlwaysExportCompartmentOutputs(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings

setAnchor(Anchor) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters

setAnchor(Anchor) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

setAnchor(TableToRectangularROIAlgorithm.Anchor) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

setAnchor(Anchor) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.CanvasEqualizer

setAnchor(Anchor) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm

setAnchor(Anchor) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm

setAnchor(Anchor) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm

setAnchor(Anchor) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

setAnchor(Anchor) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

setAnchor(Anchor) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

setAngle(int) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ArrowAnnotationGraphNode

setAngle(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

setAngle(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

setAngle(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RotateRoiAlgorithm

setAngle(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm

setAnisotropy(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationEnhancementSettings_Old

Deprecated.

setAnisotropy(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationTweaksSettings

setAnisotropy(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTweaksSettings

setAnisotropy(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationTweaksSettings

setAnnotateC(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

setAnnotateC(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm

setAnnotateT(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

setAnnotateT(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm

setAnnotateWithChannelIndex(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsAlgorithm

Deprecated.

setAnnotateWithCurrentData(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractDataAnnotation

setAnnotateWithRoiIndex(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromRoiAlgorithm

setAnnotateWithRoiName(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromRoiAlgorithm

setAnnotateWithSlotName(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsAlgorithm

Deprecated.

setAnnotateWithValues(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableIntoRowsAlgorithm

setAnnotateZ(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

setAnnotateZ(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm

setAnnotationBoundingHeight(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

setAnnotationBoundingHeight(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

setAnnotationBoundingHeight(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm

setAnnotationBoundingWidth(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

setAnnotationBoundingWidth(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

setAnnotationBoundingWidth(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm

setAnnotationC(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm

setAnnotationC(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm

setAnnotationC(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

setAnnotationC(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

setAnnotationCLocation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

setAnnotationColumnChannelIndex(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsAlgorithm

Deprecated.

setAnnotationColumnFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

setAnnotationColumnSlotName(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsAlgorithm

Deprecated.

setAnnotationExpression(AnnotationQueryExpression) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveAnnotationAlgorithm

setAnnotationExpression(AnnotationQueryExpression) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotationToPath

setAnnotationFilter(AnnotationQueryExpression) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SimplifyAnnotationsAlgorithm

setAnnotationGenerator(NamedTextAnnotationGeneratorExpression.List) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertTracksToRoiNode

setAnnotationGenerator(NamedTextAnnotationGeneratorExpression.List) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SplitSpotsNode

setAnnotationGenerator(NamedTextAnnotationGeneratorExpression.List) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.SplitTracksNode

setAnnotationId(long) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROAnnotationReferenceData

setAnnotationIndex(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm

setAnnotationList(List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.plugins.cellpose.utils.CellposeModelInfo

setAnnotationMap(Multimap<Class<? extends Annotation>, Annotation>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

setAnnotationMatchingMethod(JIPipeTextAnnotationMatchingMethod) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

setAnnotationMatchingMethod(JIPipeTextAnnotationMatchingMethod) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

setAnnotationMatchingMethod(JIPipeTextAnnotationMatchingMethod) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

setAnnotationMatchingMethod(JIPipeTextAnnotationMatchingMethod) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm

setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm

setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm

setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROPlateReferenceAlgorithm

setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm

setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.AnnotateWithJsonDataAlgorithm

setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.AnnotateWithTextDataAlgorithm

setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.AnnotateWithXPathDataAlgorithm

setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateDataWithTableValues

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithmIterationStepGenerationSettings

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByExpression

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithData

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithDataString

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithSourceSlot

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.DataAnnotationToStringAnnotation

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractAndReplaceAnnotation

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.GenerateRandomUniqueAnnotation

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.GenerateUniqueAnnotation

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RenameAnnotation

setAnnotationMergeStrategy(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RenameDataAnnotation

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimplePathAnnotationGenerator

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.forms.utils.SingleAnnotationIOSettings

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.ParametersToAnnotationsAlgorithm

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.IteratingPythonScriptAlgorithm

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.MergingPythonScriptAlgorithm

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.PythonScriptAlgorithm

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.r.algorithms.IteratingRScriptAlgorithm

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.r.algorithms.MergingRScriptAlgorithm

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm

setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnsToAnnotationsAlgorithm

setAnnotationName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByProjectPaths.Entry

setAnnotationName(String) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithData

setAnnotationName(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SetSingleAnnotation

setAnnotationName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm.Entry

setAnnotationName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.omero.parameters.OMEROKeyValuePairToAnnotationImporter

setAnnotationName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.AnnotateWithJsonDataAlgorithm.Entry

setAnnotationName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.AnnotateWithTextDataAlgorithm.Entry

setAnnotationName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.AnnotateWithXPathDataAlgorithm.Entry

setAnnotationName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateDataWithTableValues.AnnotationSettings

setAnnotationNameFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveArrayAnnotationsAlgorithm

setAnnotationNameFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveNAAnnotationColumnsAlgorithm

setAnnotationNameFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AddAnnotationColumnsAlgorithm

setAnnotationNameQuery(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractDataAnnotation

setAnnotationPrefix(String) - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AddAnnotationColumnsAlgorithm

setAnnotationRemovalMode(SimplifyAnnotationsAlgorithm.AnnotationRemovalMode) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SimplifyAnnotationsAlgorithm

setAnnotations(List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableRowInfo

Compatibility function to allow reading tables in an older format

setAnnotations(NamedTextAnnotationGeneratorExpression.List) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByExpression

setAnnotations(StringAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataRowFolder

setAnnotations(ExpressionTableColumnGeneratorProcessorParameterList) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnnotateByImageStatisticsExpressionAlgorithm

setAnnotationsFromPython(PyDictionary, Map<String, JIPipeTextAnnotation>) - Static method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

Sets annotations from a Python dictionary

setAnnotationSupplier(Function<Class<? extends Annotation>, Annotation>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

setAnnotationSupplier(Function<Class<? extends Annotation>, Annotation>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess

setAnnotationT(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm

setAnnotationT(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm

setAnnotationT(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

setAnnotationT(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

setAnnotationTLocation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

setAnnotationType(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

setAnnotationType(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm

setAnnotationValue(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByProjectPaths.Entry

setAnnotationValue(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SetSingleAnnotation

setAnnotationValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.ExplodeRoi3DListAlgorithm

setAnnotationValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.ExplodeRoiAlgorithm

setAnnotationValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.omero.parameters.OMEROKeyValuePairToAnnotationImporter

setAnnotationValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateDataWithTableValues.AnnotationSettings

setAnnotationX(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm

setAnnotationX(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

setAnnotationX(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

setAnnotationX(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm

setAnnotationXLocation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

setAnnotationY(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm

setAnnotationY(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

setAnnotationY(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

setAnnotationY(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm

setAnnotationYLocation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

setAnnotationZ(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm

setAnnotationZ(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm

setAnnotationZ(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

setAnnotationZ(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

setAnnotationZLocation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

setAntialiased(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

setAntialiased(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

setAppend(boolean) - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters

setAppend(OptionalBooleanParameter) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

setAppend(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ApplyExpressionToColumnsAlgorithm

Deprecated.

setAppend(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ConvertColumnsAlgorithm

setAppendDirectoryNameToTarget(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.CopyPath

setApplyDespeckle(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

setApplyDilation(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologicalReconstruction2DAlgorithm

setApplyDilation(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologicalReconstruction3DAlgorithm

setApplyFirstCLAHE(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

setApplyGaussian(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

setApplyInternalGradient(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

setApplyMerging(boolean) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

setApplyPerChannel(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm

setApplyPerChannel(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm

setApplyPerChannel(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm

setApplyPerChannel(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiCalculatorAlgorithm

setApplyPerFrame(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm

setApplyPerFrame(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm

setApplyPerFrame(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm

setApplyPerFrame(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiCalculatorAlgorithm

setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm

setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm

setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConditionalInverterAlgorithm

setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ImageToTableAlgorithm

setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.MultipleImagesToTableAlgorithm

setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm

setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiCalculatorAlgorithm

setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm

setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm

setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.HistogramGenerator

setApplySecondCLAHE(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

setApplyTiling(boolean) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling2DSettings

setApplyTiling(boolean) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling3DSettings

setApplyToAllPlanes(boolean) - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings.ContrastEnhancerSettings

setApplyToAllPlanes(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.LUTInverterAlgorithm

setArcHeight(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm.Entry

setArcHeight(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm

Deprecated.

setArcWidth(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm.Entry

setArcWidth(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm

Deprecated.

setArguments(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.api.environments.JIPipeProcessArtifactEnvironment

setArguments(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

setArguments(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.python.PythonEnvironment

setArguments(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.r.REnvironment

setArguments(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDownloadsApplicationSettings.DownloadEnvironment

setArrowSize(int) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ArrowAnnotationGraphNode

setArtifactId(String) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

setArtifactPaint(Paint) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Sets the paint used to color the median and average markers and sends a RendererChangeEvent to all registered listeners.

setArtifactQuery(JIPipeArtifactQueryParameter) - Method in class org.hkijena.jipipe.api.environments.JIPipeArtifactEnvironment

setAskOnDeleteCompartment(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setAskOnDeleteNode(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setAskOnDeleteParameter(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setAssembleTemplates(boolean) - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

setAssembleTemplatesBackground(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

setAssembleTemplatesOutput(OptionalDataInfoRefParameter) - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

setAssociationThreshold(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

setAttachments(Map<Class<?>, Object>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Sets the attachments map Warning: Attachments are not serialized

setAttachOnlyNonDefaultParameterAnnotations(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings

setAttachOnlyNonDefaultParameterAnnotations(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

setAttachParameterAnnotations(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings

setAttachParameterAnnotations(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

setAttitudeExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm

setAttribute(GrayscaleAttributeFiltering2DAlgorithm.Attribute) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm

setAttribute(GrayscaleAttributeFiltering3DAlgorithm.Attribute) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm

setAugment(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationEnhancementSettings_Old

Deprecated.

setAuthors(JIPipeAuthorMetadata.List) - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

Sets the authors

setAutoAddAuthors(boolean) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

setAutoCalibrateAfterPulling(boolean) - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings

setAutoClamp(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.SliceROIListAlgorithm

setAutoClamp(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm

Deprecated.

setAutoClamp(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2

setAutoConfigureAccelerationOnNextStartup(boolean) - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

setAutoDownload(boolean) - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

setAutoHideEdgeDistanceThreshold(int) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setAutoHideEdgeOverlapThreshold(double) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setAutoLabelOutputWithFileName(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.JIPipeFilesystemPluginApplicationSettings

setAutoLayout(JIPipepGraphAutoLayoutMethod) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setAutoLayoutMovesOtherNodes(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setAutomaticallyAddToProjects(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectAuthorsApplicationSettings

setAutoMuteBySelection(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setAutoMuteEdges(boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

setAutoMuteEdgesEnabled(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setAutoRemoveOutdatedCachedData(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

setAutoSaveDelay(int) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeBackupApplicationSettings

setAutoSaveLastDisplay(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

setAutoSaveLastImporter(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

setAutoScale(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

setAutoScale(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

setAutoScale(boolean) - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

setAutoThresholdMethod(AutoThresholder.Method) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.NucleiSegmentation3DAlgorithm

setAvailableItems(List<T>) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopPickerDialog

setAvailableParameters(Map<String, JIPipeParameterAccess>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionVisibilities

Sets the list of available parameters

setAvailableTypes(Set<JIPipeDataInfo>) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddAlgorithmSlotPanel

setAverageWindow(int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfoETA

Sets the window size for the ETA calculation

setAviCompression(AVICompression) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImage2Algorithm

setAviCompression(AVICompression) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

setAviCompression(AVICompression) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm

setAvoidGPUMemory(boolean) - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNode

setAvoidLabelOnImage(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelParameters

setAvoidScaling(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.ImageParameters

setAvoidUnnecessaryScaling(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

setAzimuthExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm

setBackground(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

setBackgroundColor(Color) - Method in class org.hkijena.jipipe.plugins.core.nodes.JIPipeCommentNode

setBackgroundColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

setBackgroundColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

setBackgroundColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

setBackgroundColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToRGBAlgorithm

setBackgroundColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

setBackgroundColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

setBackgroundColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

setBackgroundColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

setBackgroundColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

setBackgroundColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.CanvasEqualizer

setBackgroundColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm

setBackgroundColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm

setBackgroundColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm

setBackgroundColor(Color) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

setBackgroundComponent(JComponent) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

setBackgroundImage(BufferedImage) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanelImageComponent

setBackgroundImage(BufferedImage) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopImageFrameComponent

setBackgroundMargin(InnerMargin) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

setBackgroundMargin(InnerMargin) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

setBackgroundType(RollingBallBackgroundEstimator2DAlgorithm.BackgroundType) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm

setBackgroundValue(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ApplyDistanceTransform2DAlgorithm

setBackgroundZXYRatio(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

setBackupFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.RemoveVertexValueBackupsAlgorithm

setBackupFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.RestoreVertexValueBackupAlgorithm

setBackupItemList(List<JIPipeProjectBackupItem>) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItemCollection

setBackupOldValue(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.RestoreVertexValueBackupAlgorithm

setBackupOldValue(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexValueFromImageAlgorithm

setBackupOldValueToMetadata(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexValueFromImageAlgorithm

setBackupTime(LocalDateTime) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItem

setBalanceClasses(boolean) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.WekaClassifierSettings

setBands(List<JIPipeDesktopRibbon.Band>) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Task

setBandwidth(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

setBarColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

setBarColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

setBarColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

setBarThickness(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

setBarThickness(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

setBarThicknessInPixels(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Sets the current work directory of this algorithm.

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ModifyAnnotationScript

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SplitByAnnotationScript

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelIterating

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelSimpleIterating

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileDataSource

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileListDataSource

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderDataSource

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderListDataSource

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathDataSource

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathListDataSource

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.MacroWrapperAlgorithm

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsScriptAlgorithm

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge.FilterAndMergeRoiByStatisticsScriptAlgorithm

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.IteratingJythonScriptAlgorithm

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.JythonScriptAlgorithm

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.MergingJythonScriptAlgorithm

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.SimpleIteratingJythonScriptAlgorithm

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.IteratingPythonScriptAlgorithm

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.MergingPythonScriptAlgorithm

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.PythonScriptAlgorithm

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.r.algorithms.IteratingRScriptAlgorithm

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.r.algorithms.MergingRScriptAlgorithm

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.tables.nodes.ModifyAndMergeTablesScript

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.tables.nodes.ModifyTablesScript

setBaseDirectory(Path) - Method in class org.hkijena.jipipe.plugins.tables.nodes.TablesFromScript

setBaseName(String) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.GenerateUniqueAnnotation

setBaseName(String) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.TemporaryFolderDataSource

setBatchGenerationSettings(JIPipeMergingAlgorithmIterationStepGenerationSettings) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

setBatchSize(int) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

setBatchSize(int) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationPerformanceSettings_Old

Deprecated.

setBatchSize(int) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2TrainingTweaksSettings

setBatchSize(int) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTrainingTweaksSettings

setBatchSize(int) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeTrainingTweaksSettings

setBeta(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

setBinarize(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.Voronoi2DAlgorithm

setBinAxisFontSize(int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

setBinAxisLabel(String) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

setBinAxisMaximum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

setBinAxisMinimum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

setBins(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer

setBins(int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

setBioFormatsCompression(OMETIFFCompression) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesApplicationSettings

SetBioFormatsExporterSettings - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms

SetBioFormatsExporterSettings(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.SetBioFormatsExporterSettings

SetBioFormatsExporterSettings(SetBioFormatsExporterSettings) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.SetBioFormatsExporterSettings

setBitDepth(OptionalBitDepth) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.FastImageArithmeticsAlgorithm

setBitDepthAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

setBitDepthAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

setBlackBackground(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

setBlackBackground(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

setBlackBackground(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.FindHoles2DAlgorithm

setBlackBackground(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyFillHoles2DAlgorithm

setBlackToAlpha(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel

Deprecated.

setBlendMode(ImageBlendMode) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

setBlendMode(ImageBlendMode) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageBlendLayer

setBlockedNotifications(StringList) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

setBlockRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer

setBlockRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm

setBlockRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm

setBlockRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm

setBlue(int) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

setBlueThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

setBlueYellowThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

setBookmarked(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

setBookmarks(FileChooserBookmarkList) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

setBorder(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.CropLabelsAlgorithm

setBorderColor(Color) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

setBorderColor(Color) - Method in interface org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopColorIcon

setBorderColor(Color) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.OverlayJIPipeDesktopColorIcon

setBorderColor(Color) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.SolidColorIcon

setBorderColor(Color) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

setBorderColor(Color) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.TextBoxAnnotationGraphNode.ShapeParameters

setBorderColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelColorMapIcon

setBorderColor(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm

setBorderColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.CanvasParameters

setBorderColor(Color) - Method in class org.hkijena.jipipe.plugins.parameters.library.colors.ColorMapIcon

setBorderDefinition(Margin) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.RemoveBorderRoisAlgorithm

setBorderDistance(double) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm

setBorderDistance(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.RemoveBorderFilaments

setBorderMode(BorderMode) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling2DSettings

setBorderMode(BorderMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm

setBorderMode(BorderMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

setBorderMode(BorderMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

setBorderSize(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.CanvasParameters

setBorderThickness(int) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

setBorderThickness(int) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.TextBoxAnnotationGraphNode.ShapeParameters

setBorderType(OpenCvBorderType) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.filters.BilateralFilterAlgorithm

setBorderWidth(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

setBorderWidth(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.MontageToStackAlgorithm

setBorderWidth(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

setBottom(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

setBottom(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.InnerMargin

setBottom(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

setBottomIcon(ImageIcon) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopAnimatedIcon

setBoundary(OutOfBoundsMirrorFactory.Boundary) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.MirrorImageJ2OutOfBoundsFactoryData

setBrightnessThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

setBuffered(boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

setC(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

setC(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

setC(TIntList) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndices

setCalibrationMode(ImageJCalibrationMode) - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings.ContrastEnhancerSettings

setCalibrationMode(ImageJCalibrationMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.ImageJContrastEnhancerAlgorithm

setCalibrationMode(ImageJCalibrationMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo16BitAutoContrastAlgorithm

setCalibrationMode(ImageJCalibrationMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo8BitAutoContrastAlgorithm

setCalibrationMode(ImageJCalibrationMode) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm

setCalibrationMode(ImageJCalibrationMode) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.CalibrationParameters

setCallbackConfirm(Consumer<List<Path>>) - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNext

setCancelled(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.BeforeAddParameterEvent

setCandidateVertexDegreeLimit(Vector2iParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

setCandidateVertexValueLimit(Vector2dParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

setCanvas(JIPipeDesktopGraphCanvasUI) - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphDragAndDropBehavior

Sets the canvas that contains the algorithm nodes

setCanvas(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.dragdrop.JIPipeCreateCompartmentNodesFromDraggedDataDragAndDropBehavior

setCanvas(JIPipeDesktopGraphCanvasUI) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.dragdrop.JIPipeCreatePipelineNodesFromDraggedDataDragAndDropBehavior

setCanvasAnchor(Anchor) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.CanvasParameters

setCanvasBackgroundColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.CanvasParameters

setCategories(PluginCategoriesEnumParameter.List) - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

setCategory(JIPipeNodeTypeCategory) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

Sets the category

setCategoryAxisFontSize(int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CategoryJFreeChartPlotData

setCategoryAxisLabel(String) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CategoryJFreeChartPlotData

setCategoryColumns(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.UnMeltTableAlgorithm

setCategoryParameter(DynamicCategoryEnumParameter) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

setcAxis(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm

setCellpose2Environment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePluginProjectSettings

setCellpose3Environment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.cellpose.CellposePluginProjectSettings

setCellProbabilityThreshold(double) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationThresholdSettings_Old

Deprecated.

setCellProbabilityThreshold(double) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationThresholdSettings

setCellRenderer(ListCellRenderer<? super T>) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopPickerDialog

setCenter(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanelImageComponent

setCenter(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopImageFrameComponent

setCenter(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawOvalRoiAlgorithm

Deprecated.

setCenter(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm

Deprecated.

setCenter(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

setCenterScale(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

setCenterScale(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

setCenterScale(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

setCenterScale(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

setCenterScale(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ScaleRoiAlgorithm

setCenterScale(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

setCenterX(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

setCenterX(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

setCenterX(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

setCenterX(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

setCenterX(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RotateRoiAlgorithm

setCenterX(float) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

setCenterY(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

setCenterY(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

setCenterY(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

setCenterY(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

setCenterY(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RotateRoiAlgorithm

setCenterY(float) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

setCenterZ(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

setCenterZ(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

setCenterZ(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

setCenterZ(float) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

setCentroidC(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

setCentroidC(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

setCentroidT(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

setCentroidT(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

setCentroidX(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

setCentroidX(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

setCentroidY(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

setCentroidY(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

setCentroidZ(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

setCentroidZ(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

setChamferWeights(ChamferWeights) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap2DAlgorithm

setChamferWeights(ChamferWeights3D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap3DAlgorithm

setChamferWeights(ChamferWeights) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.GeodesicDistanceMap2DAlgorithm

setChamferWeights(ChamferWeights3D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.LabelChamferDistanceMap3DAlgorithm

setChangeThreshold(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXConvergenceParameters

setChannel(int) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

setChannel(int) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.NonSpatialPoint3d

setChannel1Name(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

setChannel2Name(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

setChannelColumnFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

setChannelIndexAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm

setChannelIndexAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

setChannelLocation(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

setChannelLocation(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

setChannelLocation(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

setChannelLUT(ImagePlus, LUT[]) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

setChannelName(String) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerLUTEditor

setChannelName(String) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerOpacityLUTEditor

setChannelNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm

setChannelNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

setChannelNames(String, String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.CustomColoc2

setChannelReordering(IntegerAndIntegerPairParameter.List) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm

setChannelSizeAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

setChannelSizeAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

setCheckerboardColor1(Color) - Method in class org.hkijena.jipipe.plugins.imp.nodes.ConvertImpImageToImagePlusAlgorithm

setCheckerboardColor2(Color) - Method in class org.hkijena.jipipe.plugins.imp.nodes.ConvertImpImageToImagePlusAlgorithm

setCheckerboardSize(int) - Method in class org.hkijena.jipipe.plugins.imp.nodes.ConvertImpImageToImagePlusAlgorithm

setCheckPeriod(int) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXConvergenceParameters

setChildren(BiMap<String, JIPipeParameterTree.Node>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

setChildren(List<Scene3DNode>) - Method in class org.hkijena.jipipe.plugins.scene3d.model.Scene3DGroupNode

setChunkSizeExpression(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm

setCitation(String) - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

Sets the citation

setClass0CountColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

setClass0MeanColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

setClass0SumColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

setClass1CountColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

setClass1MeanColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

setClass1SumColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

setClassifier(String) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

setClassifier(Classifier) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.WekaClassifierParameter

setClassifier(WekaClassifierParameter) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.WekaClassifierSettings

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.IteratingPythonScriptAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.MergingPythonScriptAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.PythonScriptAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.r.algorithms.IteratingRScriptAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.r.algorithms.MergingRScriptAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessIteratingAlgorithm

setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessMergingAlgorithm

setCleanupOutputsAfterFailure(boolean) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

setCleanupOutputsAfterSuccess(boolean) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

setClearBeforeWrite(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.SetROI3DMetadataFromTableAlgorithm

setClearBeforeWrite(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata.SetImageMetadataFromTableAlgorithm

setClearBeforeWrite(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm

setClearBeforeWrite(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetROIMetadataFromTableAlgorithm

setCluster(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationTweaksSettings

setCode(PythonScript) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ModifyAnnotationScript

setCode(PythonScript) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SplitByAnnotationScript

setCode(ImageJMacro) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.MacroWrapperAlgorithm

setCode(PythonScript) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsScriptAlgorithm

setCode(PythonScript) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge.FilterAndMergeRoiByStatisticsScriptAlgorithm

setCode(String) - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptParameter

setCode(PythonScript) - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.IteratingJythonScriptAlgorithm

setCode(PythonScript) - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.JythonScriptAlgorithm

setCode(PythonScript) - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.MergingJythonScriptAlgorithm

setCode(PythonScript) - Method in class org.hkijena.jipipe.plugins.python.algorithms.jython.SimpleIteratingJythonScriptAlgorithm

setCode(PythonScript) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.IteratingPythonScriptAlgorithm

setCode(PythonScript) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.MergingPythonScriptAlgorithm

setCode(PythonScript) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.PythonScriptAlgorithm

setCode(PythonScript) - Method in class org.hkijena.jipipe.plugins.tables.nodes.ModifyAndMergeTablesScript

setCode(PythonScript) - Method in class org.hkijena.jipipe.plugins.tables.nodes.ModifyTablesScript

setCode(PythonScript) - Method in class org.hkijena.jipipe.plugins.tables.nodes.TablesFromScript

setCollapsed(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

setCollapsed(boolean) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetParameter

setCollapsed(boolean) - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptParameter

setCollection(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

setColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.api.run.JIPipeProjectRunSet

setColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

setColor(Color) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.MonochromeJIPipeDesktopColorIcon

setColor(Color) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters

setColor(Color) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ArrowAnnotationGraphNode

setColor(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesExpressionAlgorithm

setColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesManuallyAlgorithm

setColor(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

setColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

setColor(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm.NewEdgesSettings

setColor(Color) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentEdge

setColor(Color) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

setColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel

Deprecated.

setColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking.SetToColorAlgorithm

setColor(Color) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DIndexedMeshGeometry

setColor(Color) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry

setColor(Color) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

setColor(Color) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DUnindexedMeshGeometry

setColor(Color) - Method in interface org.hkijena.jipipe.plugins.scene3d.model.Scene3DGeometry

Sets the color of this geometry

setColor(Color) - Method in class org.hkijena.jipipe.utils.ColorUtils.GradientStop

setColorAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

setColorMap(ColorMap) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap

setColorMap(ColorMaps.CommonLabelMaps) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelColorMapIcon

setColorMap(ColorMaps.CommonLabelMaps) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToRGBAlgorithm

setColorMap(ColorMap) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorMapAlgorithm

setColorMap(ColorMap) - Method in class org.hkijena.jipipe.plugins.parameters.library.colors.ColorMapIcon

setColorMap(ColorMap) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

setColorMode(OMEColorMode) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

setColorMode(OMEColorMode) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

setColorMode(OMEColorMode) - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

setColorSelectedNodeEdges(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setColorSpaceAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

setColorSpaceAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

setColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotationTableToPaths

setColumn(int) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

setColumn(String, TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Sets a column from another table column.

setColumn(String, TableColumnData, boolean) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Sets a column from another table column.

setColumnAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

setColumnC(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

setColumnC(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

setColumnC(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

setColumnC(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

setColumnC(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

setColumnCountAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm

setColumnFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSimpleAlgorithm

setColumnFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm

setColumnFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementMergingAlgorithm

setColumnFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableIntoColumnsAlgorithm

setColumnHeight(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

setColumnMatching(JIPipeColumMatching) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

setColumnMatching(JIPipeColumMatching) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

setColumnMatching(JIPipeColumMatching) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

setColumnMetadata(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

setColumnMetadata(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

setColumnMetadata(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

setColumnMetadata(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

setColumnMetadata(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

setColumnName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm.Entry

setColumnName(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

setColumnName(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

setColumnName(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

setColumnName(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

setColumnName(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

setColumnName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.ExtractJsonDataAsTableAlgorithm.Entry

setColumnName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.TextDataToTableAlgorithm.Entry

setColumnName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm.Entry

setColumnName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2.Entry

setColumnNamesAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm

setColumnNormalization(TableColumnNormalization) - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.ExtractJsonDataAsTableAlgorithm

setColumnNormalization(TableColumnNormalization) - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.TextDataToTableAlgorithm

setColumnNormalization(TableColumnNormalization) - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm

setColumnNormalization(TableColumnNormalization) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.UnMeltTableAlgorithm

setColumnRadius(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

setColumns(ExpressionTableColumnGeneratorProcessorParameterList) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm

setColumns(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

setColumns(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.MontageToStackAlgorithm

setColumns(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

setColumns(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromTableAlgorithm

setColumns(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm

setColumns(ExpressionTableColumnGeneratorProcessorParameterList) - Method in class org.hkijena.jipipe.plugins.tables.nodes.GenerateColumnAlgorithm

setColumns(ExpressionTableColumnGeneratorProcessorParameterList) - Method in class org.hkijena.jipipe.plugins.tables.nodes.GenerateTableFromExpressionAlgorithm

setColumns(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableByColumnsAlgorithm

setColumnT(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

setColumnT(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

setColumnT(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

setColumnT(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

setColumnT(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

setColumnText(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

setColumnToValue(String, Object) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Sets a column to a value.

setColumnWidth(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

setColumnX(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

setColumnX1(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

setColumnX1(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

setColumnX1(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

setColumnX1(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

setColumnX2(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

setColumnX2(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

setColumnY(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

setColumnY1(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

setColumnY1(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

setColumnY1(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

setColumnY1(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

setColumnY2(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

setColumnY2(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

setColumnZ(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

setColumnZ(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

setColumnZ(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

setColumnZ(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

setColumnZ(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

setCombinationFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SimplifyAnnotationsAlgorithm

setCompactMode(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.DocumentTabComponent

setCompareAbsolute(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.HessianFeatureAlgorithm

setCompareAbsolute(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.Hessian2DAlgorithm

Deprecated.

setCompareAbsolute(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

setCompartment(UUID, UUID) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Sets the compartment of a node

setCompartmentId(String) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm

setCompartmentsEditorDockLayout(String) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.DockLayoutSettings

setCompartmentsEditorDockLayoutTemplates(StringAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.DockLayoutSettings

setComponent(JComponent) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

setComponentDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm

setComponentDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

setComponentIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.split.SplitFilamentsIntoConnectedComponentsAlgorithm

setComponentNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

setComponentNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

setComponents(List<Component>) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Action

setComponentSupplier(Supplier<JComponent>) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

setComposite(boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

setCompositeROI(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

setCompression(ExportImagePlusAsOMEZARRAlgorithm.Compression) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm

setCompression(OMETIFFCompression) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEExporterSettings

setConcatenate(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

setConcatenate(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

setConcatenate(boolean) - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

setConcatenateDownsampledLayers(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

setConcatenateDownsampledLayers(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2TrainingTweaksSettings

setConcatenateDownsampledLayers(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeTrainingTweaksSettings

setCondaExecutable(Path) - Method in class org.hkijena.jipipe.plugins.python.installers.SelectCondaEnvPythonInstaller.Configuration

setCondition(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConditionalInverterAlgorithm

setCondition(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistrationAlgorithmRule

setConnectAcrossC(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

setConnectAcrossC(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

setConnectAcrossC(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

setConnectAcrossT(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

setConnectAcrossT(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

setConnectAcrossT(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

setConnectHighlight(JIPipeDesktopGraphCanvasUI.ConnectHighlight) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling2DAlgorithm

setConnectivity(Neighborhood3D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling3DAlgorithm

setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm

setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.SplitLabelsConnectedComponents2DAlgorithm

setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMaxima2DAlgorithm

setConnectivity(Neighborhood3D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMaxima3DAlgorithm

setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMinima2DAlgorithm

setConnectivity(Neighborhood3D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMinima3DAlgorithm

setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMaxima2DAlgorithm

setConnectivity(Neighborhood3D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMaxima3DAlgorithm

setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMinima2DAlgorithm

setConnectivity(Neighborhood3D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.RegionalMinima3DAlgorithm

setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm

setConnectivity(Neighborhood3D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm

setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologicalReconstruction2DAlgorithm

setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologicalReconstruction3DAlgorithm

setConnectivity(Neighborhood2D3D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm

setConnectivity(Neighborhood2D3D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm

setConnectNewVerticesToStart(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm

setConnectOverDimensionLinear(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm

setConsistencyWeight(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

setConsumeOnOverlap(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

setConsumeOnOverlap(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

setContact(String) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

setContent(List<GraphNodeParameterReference>) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup

setContent(T) - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameter

setContentPane(Container) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

setContents(NodeGroupContents) - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

setContentString(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROAnnotationReferenceData

setContentX(int) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

setContentXY(int, int) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

setContentY(int) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

setContext(Context) - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

setContext(Context) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

setContext(Context) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopSplashScreen

setContextActions(List<NodeUIContextAction>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

setContinueOnFailure(JIPipeGraphRunPartitionInheritedBoolean) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

setContinueOnFailure(JIPipeGraphRunPartitionInheritedBoolean) - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

setContinueOnFailure(JIPipeGraphRunPartitionInheritedBoolean) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

setContinueOnFailure(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.ContinueOnFailureSettings

setContinueOnFailureExportFailedInputs(JIPipeGraphRunPartitionInheritedBoolean) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

setContinueOnFailureExportFailedInputs(JIPipeGraphRunPartitionInheritedBoolean) - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

setContinueOnFailureExportFailedInputs(JIPipeGraphRunPartitionInheritedBoolean) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

setContinueOnFailureSettings(JIPipeRuntimePartition.ContinueOnFailureSettings) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

setContrastHigh(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

setContrastLow(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

setContrastThreshold(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm

setConverter(JIPipeDataConverter) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry.DataConverterEdge

setCopyOriginalEdges(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm

setCopySlices(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm

setCopySlices(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

setCopySlices(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm

setCornerSize(int) - Method in class org.hkijena.jipipe.utils.ui.RoundedLineBorder

setCorrectCorners(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm

setCorrespondingAuthor(boolean) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

setCostesRandomizations(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

setCostesSignificanceTest(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

setCountAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

setCountColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator

setCounterAnnotation(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.CreateStackAlgorithm

setCountingColumn(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm

setCreateCheckerboard(boolean) - Method in class org.hkijena.jipipe.plugins.imp.nodes.ConvertImpImageToImagePlusAlgorithm

setCreateComposite(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeChannelsAlgorithm

setCreatedDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackToDimensionMerger2Algorithm

setCreatedDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackToDimensionMergerAlgorithm

setCreatePyramid(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm

setCriteriaMethod(IterativeThreshold3DAlgorithm.CriteriaMethod) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

setCrop(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

setCrop(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

setCrop(boolean) - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

setCropC(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

setCropC(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm

setCropRegions(RectangleList) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

setCropRegions(RectangleList) - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

setCropT(boolean) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode

setCropT(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

setCropT(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm

setCropXY(boolean) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode

setCropXY(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

setCropXY(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm

setCropZ(boolean) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode

setCropZ(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.CropToRoiAlgorithm

setCropZ(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm

setCumulative(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator

setCumulative(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm

setCumulative(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

setCumulativeCount(double) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm.HistogramBin

setCumulativeWeightedCount(double) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm.HistogramBin

setCurlWeight(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

setCurrentColor(MaskDrawerPlugin2D.MaskColor) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

setCurrentConnectionDragSource(JIPipeDesktopGraphNodeUIActiveArea) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

setCurrentConnectionDragTarget(JIPipeDesktopGraphNodeUIActiveArea) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

setCurrentData(ResultsTableData) - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerTextAnnotationsPanel

setCurrentDirectory(Path) - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNext

setCurrentIterationStepIndex(int) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMutableIterationContext

setCurrentPoint(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegPointHandler

Set a new current point.

setCurrentRewireDragSource(JIPipeDesktopGraphNodeUISlotActiveArea) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

setCurrentRewireDragTarget(JIPipeDesktopGraphNodeUISlotActiveArea) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

setCurrentTool(JIPipeToggleableGraphEditorTool) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

setCustomAnnotationMatching(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

setCustomAnnotationMatching(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

setCustomAnnotationMatching(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

setCustomAnnotationMatching(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

setCustomBackupPath(OptionalPathParameter) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeBackupApplicationSettings

setCustomBeta(double) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseSettings

setCustomBlur(double) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseSettings

setCustomColorMap(ColorListParameter) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

setCustomColumns(StringQueryExpression) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

setCustomColumns(StringQueryExpression) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

setCustomColumns(StringQueryExpression) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

setCustomColumns(StringQueryExpression) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings

setCustomDescription(HTMLText) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference

setCustomDescription(HTMLText) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Sets a custom description.

setCustomDownsample(double) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseSettings

setCustomGBlur(double) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseSettings

setCustomHeight(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableToImageAlgorithm

setCustomHMax(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm

setCustomHMin(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm

setCustomIcon(IconRef) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

setCustomInstanceGenerator(Supplier<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.collections.ListParameter

setCustomIsParameterCollectionVisible(BiFunction<JIPipeParameterTree, JIPipeParameterCollection, Boolean>) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

setCustomIsParameterVisible(BiFunction<JIPipeParameterTree, JIPipeParameterAccess, Boolean>) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

setCustomMax(double) - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings.ContrastEnhancerSettings

setCustomMax(double) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm

setCustomMax(double) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.CalibrationParameters

setCustomMin(double) - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings.ContrastEnhancerSettings

setCustomMin(double) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm

setCustomMin(double) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.CalibrationParameters

setCustomMinMax(double, double) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl

setCustomName(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder

setCustomName(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

Overrides the name displayed in the UI

setCustomName(String) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference

setCustomName(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Sets a custom name.

setCustomPoisson(double) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseSettings

setCustomRange(Vector2dParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.ImageJContrastEnhancerAlgorithm

setCustomRange(Vector2dParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo16BitAutoContrastAlgorithm

setCustomRange(Vector2dParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo8BitAutoContrastAlgorithm

setCustomSizeC(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableToImageAlgorithm

setCustomSizeT(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableToImageAlgorithm

setCustomSizeZ(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableToImageAlgorithm

setCustomText(HTMLText) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

setCustomThreshold(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.NucleiSegmentation3DAlgorithm

setCustomWidth(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableToImageAlgorithm

setCycleFinderAlgorithm(CycleFinderAlgorithm) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentCyclesToROIAlgorithm

setCycleFinderAlgorithm(CycleFinderAlgorithm) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FilamentCyclesToComponentsAlgorithm

setCycleIdAnnotation(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FilamentCyclesToComponentsAlgorithm

setCycleIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.split.SplitFilamentsIntoCyclesAlgorithm

setDampZ(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

setDarkBackground(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologySkeletonize2DAlgorithm

setDarkBackground(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm

setDarkBackground(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm

setDarkBackground(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm

setDarkBackground(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm

setDarkBackground(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm

setDarkBackground(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm

setDarkBackground(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm

setDarkIconURL(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

setDarkLine(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

setData(int, JIPipeData) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Sets the data of a specific row

setData(String) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

setData(JIPipeData) - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow.DownloadFullDataRun

setData(byte[]) - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData

setData(byte[]) - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData

setDataAnnotation(int, JIPipeDataAnnotation) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Sets a data annotation

setDataAnnotation(int, String, JIPipeData) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Sets a data annotation

setDataAnnotationFilter(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PullDataTableAnnotations

setDataAnnotationFilter(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PushDataTableAnnotations

setDataAnnotationItemStore(int, String, JIPipeDataItemStore) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Sets a virtual data annotation

setDataAnnotationItemStore_(int, String, JIPipeDataItemStore) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Sets a virtual data annotation

setDataAnnotationMergeMode(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithData

setDataAnnotationMergeMode(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableArchive

setDataAnnotationMergeMode(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableDirectory

setDataAnnotationMergeMode(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PullDataTableAnnotations

setDataAnnotationMergeMode(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PushDataTableAnnotations

setDataAnnotationMergeMode(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.ImportJIPipeSlotFolderAlgorithm

setDataAnnotationMergeStrategy(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

setDataAnnotationMergeStrategy(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

setDataAnnotationMergeStrategy(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

setDataAnnotationMergeStrategy(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings

setDataAnnotationMergeStrategy(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithmIterationStepGenerationSettings

setDataAnnotationMergeStrategy(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

setDataAnnotations(List<JIPipeDataAnnotationInfo>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableRowInfo

setDataBatches(List<JIPipeMultiIterationStep>) - Method in class org.hkijena.jipipe.api.JIPipeDataBatchGenerationResult

setDataBatches(JIPipeMultiIterationStep...) - Method in class org.hkijena.jipipe.api.JIPipeDataBatchGenerationResult

setDataClass(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

setDataContext(int, JIPipeDataContext) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Sets the context of data in given row

setDataContext(JIPipeDataContext) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableRowInfo

setDataConverterFunction(Function<JIPipeDataItemStore, JIPipeDataItemStore>) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

setDataItemStore(int, JIPipeDataItemStore) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Sets the data of a specific row

setDataset(ImportRDatasetAlgorithm.Dataset) - Method in class org.hkijena.jipipe.plugins.r.algorithms.ImportRDatasetAlgorithm

setDatasetFilter(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportOMEZARRFromURIAsImagePlusAlgorithm

setDatasetFilter(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportOMEZARRFromZipDirectoryAsImagePlusAlgorithm

setDatasetId(long) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMERODatasetReferenceData

setDatasetIds(LongList) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMERODatasetReferenceDataSource

setDataSetMatching(JIPipeColumMatching) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings

setDatasetNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportOMEZARRFromURIAsImagePlusAlgorithm

setDatasetNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportOMEZARRFromZipDirectoryAsImagePlusAlgorithm

setDataSource(JIPipeDataSource) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

setDataSourceMenuLocation(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

setDataSourceRow(int) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

setDataTable(JIPipeDataTable) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantBatchPanel

setDataTable(JIPipeDataTable) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantDataTableUI

setDataTable(Store<JIPipeDataTable>) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableUI

setDataTable(Store<JIPipeDataTable>) - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerDataTableUI

setDataType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataRowFolder

setDataType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateZeroImage

setDataTypeId(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter

setDataTypeId(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter

setDeactivatedPlugins(Set<String>) - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry.Settings

setDeallocate(boolean) - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2PullAlgorithm

setDecimals(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.RoundFloatImageAlgorithm

setDeclaredFieldValue(Object, String, Object) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

setDeclaredFieldValue(Class<?>, Object, String, Object) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

Sets the field value

setDeduplicate(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

setDefaultAnimationFPS(double) - Method in class org.hkijena.jipipe.plugins.imageviewer.settings.LegacyImageViewer2DUIApplicationSettings

setDefaultContent(MarkdownText) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormHelpPanel

setDefaultCredentials(OMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginApplicationSettings

setDefaultEdgeVisibility(JIPipeGraphEdge.Visibility) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setDefaultEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.cellpose.Cellpose2PluginApplicationSettings

setDefaultEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.cellpose.Cellpose3PluginApplicationSettings

setDefaultEnvironment(OptionalTSOAXEnvironment) - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.TSOAXApplicationSettings

setDefaultEnvironment(OptionalTesseractOCREnvironment) - Method in class org.hkijena.jipipe.plugins.ijocr.settings.TesseractOCRApplicationSettings

setDefaultEnvironment(OptionalIlastikEnvironment) - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

setDefaultEnvironment(OptionalJIPipeDataDirectoryEnvironment) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesApplicationSettings

setDefaultEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.napari.NapariPluginApplicationSettings

setDefaultEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginApplicationSettings

setDefaultEnvironment(OptionalJIPipePythonAdapterLibraryEnvironment) - Method in class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonPluginAdapterApplicationSettings

setDefaultEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.python.PythonPluginApplicationSettings

setDefaultEnvironment(OptionalREnvironment) - Method in class org.hkijena.jipipe.plugins.r.RPluginApplicationSettings

setDefaultExporterFor(Class<? extends JIPipeData>, String) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry

Sets the default exporter for a data type

setDefaultImporterFor(Class<? extends JIPipeData>, String) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry

Sets the default importer for a data type

setDefaultQuickRunThreads(int) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

Sets the number of threads for test bench

setDefaultRunThreads(int) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

Sets the number of threads

setDefaultRuntimePartition(JIPipeRuntimePartition) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration

setDefaultSortOrder(SortOrder) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.SortRowsByAnnotationsAlgorithm

setDefaultValues(ExpressionTableColumnGeneratorProcessorParameterList) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm

setDeletedLabel(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByThicknessAlgorithm

setDeleteMaskedLabels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByMaskAlgorithm

setDelta(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

setDependencies(Set<JIPipeDependency>) - Method in class org.hkijena.jipipe.JIPipeMutableDependency

setDependencyAlgorithmIds(Set<String>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask

setDependencyCitations(StringList) - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

setDependencyDatatypeClasses(Set<Class<? extends JIPipeData>>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask

Sets dependency data classes.

setDependencyDatatypeIds(Set<String>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask

setDependencyId(String) - Method in class org.hkijena.jipipe.JIPipeMutableDependency

Sets the ID

setDependencyProvides(StringList) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

setDependencyProvides(StringList) - Method in class org.hkijena.jipipe.JIPipeMutableDependency

setDependencyVersion(String) - Method in class org.hkijena.jipipe.JIPipeMutableDependency

Sets the version

setDeprecated(boolean) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

setDeprecated(boolean) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

setDepth(int) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.layout.MSTGraphAutoLayoutImplementation.Edge

setDepth(int) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.layout.MSTGraphAutoLayoutImplementation.Node

setDepth(OpenCvDepth) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.ConvertDepthAlgorithm

setDescription(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder

setDescription(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

setDescription(HTMLText) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

setDescription(HTMLText) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup

setDescription(HTMLText) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

setDescription(HTMLText) - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

Sets the description

setDescription(HTMLText) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

Sets the description

setDescription(String) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification

setDescription(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

Sets the description

setDescription(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

Sets the description

setDescription(HTMLText) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

setDescription(String) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectDirectories.DirectoryEntry

setDescription(HTMLText) - Method in class org.hkijena.jipipe.api.run.JIPipeProjectRunSet

setDescription(HTMLText) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

setDescription(String) - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

setDescription(String) - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderPackage

setDescription(HTMLText) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddParameterDialog.Settings

setDescription(HTMLText) - Method in class org.hkijena.jipipe.desktop.commons.components.parameters.JIPipeDesktopDynamicParameterEditorDialog.ParameterEntry

setDescription(String) - Method in class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency

setDescription(HTMLText) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.ParameterFormData

setDescription(String) - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage

setDescription(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROAnnotationReferenceData

setDescription(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMERODatasetReferenceData

setDescription(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROImageReferenceData

setDescription(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROProjectReferenceData

setDescription(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

setDescription(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ParameterColumn

setDescriptionAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm

setDescriptionAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm

setDescriptionAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROPlateReferenceAlgorithm

setDescriptionAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm

setDescriptionAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

setDespeckleIterations(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

setDetailedDataString(boolean) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithDataString

setDetailedDataString(boolean) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.ToDataStringAlgorithm

setDevice(int) - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings

setDialog(JDialog) - Method in class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunExecuteUI

setDialog(JDialog) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddAlgorithmSlotPanel

setDialog(JDialog) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddParameterDialog

setDialog(JDialog) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopEditAlgorithmSlotPanel

setDialogTitle(String) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

setDialogType(int) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

setDiameter(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

setDiameter(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

setDiameter(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

setDiameter(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

setDiameter(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

setDiameter(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

setDiameter(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

setDiameter(int) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

setDiameter(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

setDiameter(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

setDiameter(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

setDiameter(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

setDiameter(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

setDiameter(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

setDiameter(int) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.filters.BilateralFilterAlgorithm

setDiameterAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

setDiameterAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

setDiameterAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

setDiameterAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

setDiameterAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

setDiameterAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

setDiameterAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

setDiamThreshold(double) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationThresholdSettings

setDiceCoefficientAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm

setDifference(float) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.DifferenceSpotSegmentation3DAlgorithm

setDilationErodeSteps(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm

setDilationIterations(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

setDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm

setDimensionCOperation(SplitRoiConnectedComponentsAlgorithm.DimensionOperation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

setDimensionOrder(DimensionOrder) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEExporterSettings

setDimensionTOperation(SplitRoiConnectedComponentsAlgorithm.DimensionOperation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

setDimensionZOperation(SplitRoiConnectedComponentsAlgorithm.DimensionOperation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

setDirectories(ParameterCollectionList) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectDirectories

setDirectories(JIPipeProjectDirectories) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

setDirectory(Path) - Method in class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironment

setDirectoryKey(JIPipeFileChooserApplicationSettings.LastDirectoryKey) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPathEditorComponent

setDisableOnUpdateCache(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.ContinueOnFailureSettings

setDisableResample(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationTweaksSettings

setDisableResample(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationTweaksSettings

setDisableStoreToCacheNodes(Set<UUID>) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

setDisableStoreToDiskNodes(Set<UUID>) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

setDiscardExistingAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithAnnotationTable

setDisconnectHighlight(JIPipeDesktopGraphCanvasUI.DisconnectHighlight) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

setDismiss(boolean) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction

setDisplayedAlgorithms(List<JIPipeAlgorithm>) - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopMultiAlgorithmCacheBrowserUI

setDisplayedMax(double) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.DisplayRange

setDisplayedMin(double) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.DisplayRange

setDisplayedParameters(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

setDistanceExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm

setDistanceMeasure(DistanceMeasures) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm.ClusteringSettings

setDistanceMeasure(DistanceMeasures) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm.ClusteringSettings

setDistanceMeasure(DistanceMeasures) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm.ClusteringSettings

setDistanceMetadataKey(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FindLinearFilamentVertexOrderAlgorithm

setDivergenceWeight(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

setDoCorrectPosition(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

setDocument(MarkdownText) - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopMarkdownReader

setDocumentation(SetJIPipeDocumentation) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

setDocumentTab(JIPipeDesktopTabPane.DocumentTab) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.DocumentTabComponent

setDoEstimateWidth(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

setDoExtendLine(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

setDoScaling(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter

setDoScaling(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm

setDoubleValue(double) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.StringOrDouble

setDragAndDropBehavior(JIPipeDesktopGraphDragAndDropBehavior) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

setDrawArrowHeads(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setDrawBorder(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.OverlayJIPipeDesktopColorIcon

setDrawEdges(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

setDrawFill(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.OverlayJIPipeDesktopColorIcon

setDrawFilledOutline(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm

setDrawFilledOutline(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm

setDrawFilledOutlineMode(ROIElementDrawingMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

setDrawFilledOutlineMode(ROIElementDrawingMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

setDrawFilledOutlineMode(ROIElementDrawingMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

setDrawFilledOutlineMode(ROIElementDrawingMode) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

setDrawHorizontal(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

setDrawHorizontal(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

setDrawImprovedEdges(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setDrawLabel(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

setDrawLabel(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelParameters

setDrawLabels(boolean) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.DrawerLabelSettings

setDrawLabels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

setDrawLabelsOnHover(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setDrawName(boolean) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer.LabelSettings

setDrawnFeature(SpotFeature) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer.LabelSettings

setDrawnLabel(RoiLabel) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

setDrawnLabel(RoiLabel) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

setDrawnLabel(RoiLabel) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

setDrawNodeShadows(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setDrawOutline(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm

setDrawOutline(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm

setDrawOutline(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm

setDrawOutline(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm

setDrawOutlineMode(ROIElementDrawingMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

setDrawOutlineMode(ROIElementDrawingMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

setDrawOutlineMode(ROIElementDrawingMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

setDrawOutlineMode(ROIElementDrawingMode) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

setDrawOutsideEdges(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setDrawOver(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.utils.Roi3DDrawer

setDrawOver(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm

setDrawOver(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

setDrawOver(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

setDrawOver(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

setDrawOverReference(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRGBAlgorithm

setDrawVertical(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

setDrawVertical(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

setDrawVertices(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

setDuplicate(boolean) - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters

setDuplicate(boolean) - Method in class org.hkijena.jipipe.api.compat.ImageJImportParameters

setDuplicate(OptionalBooleanParameter) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

setDuplicate(OptionalBooleanParameter) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRef

setDuplicateImage(boolean) - Method in class org.hkijena.jipipe.plugins.clij2.CLIJPluginApplicationSettings.ContrastEnhancerSettings

setDuplicateImage(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.LUTInverterAlgorithm

setDuplicateImage(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.RemoveLUTAlgorithm

setDuplicateImage(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorMapAlgorithm

setDuplicateImage(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm

setDuplicateImage(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromImageAlgorithm

setDynamic(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMaxima2DAlgorithm

setDynamic(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMaxima3DAlgorithm

setDynamic(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMinima2DAlgorithm

setDynamic(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.ExtendedMinima3DAlgorithm

setEdgesAreBackground(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ApplyDistanceTransform2DAlgorithm

setEigenvalueSelection(EigenvalueSelection2D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

setEigenvalueSelection2D(EigenvalueSelection2D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.Hessian2DAlgorithm

Deprecated.

setElement(Strel.Shape) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateStructureElement2DAlgorithm

setElement(Strel3D.Shape) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateStructureElement3DAlgorithm

setElement(Strel.Shape) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm

setElement(Strel3D.Shape) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm

setEmail(String) - Method in class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment

setEmitter(JIPipeEventEmitter<?, ?>) - Method in class org.hkijena.jipipe.api.events.AbstractJIPipeEvent

setEmitter(JIPipeEventEmitter<?, ?>) - Method in interface org.hkijena.jipipe.api.events.JIPipeEvent

Sets the first emitter.

setEmitter(JIPipeEventEmitter<?, ?>) - Method in class org.hkijena.jipipe.utils.ui.events.MouseClickedEvent

setEmitter(JIPipeEventEmitter<?, ?>) - Method in class org.hkijena.jipipe.utils.ui.events.MouseDraggedEvent

setEmitter(JIPipeEventEmitter<?, ?>) - Method in class org.hkijena.jipipe.utils.ui.events.MouseEnteredEvent

setEmitter(JIPipeEventEmitter<?, ?>) - Method in class org.hkijena.jipipe.utils.ui.events.MouseExitedEvent

setEmitter(JIPipeEventEmitter<?, ?>) - Method in class org.hkijena.jipipe.utils.ui.events.MouseMovedEvent

setEmitter(JIPipeEventEmitter<?, ?>) - Method in class org.hkijena.jipipe.utils.ui.events.MousePressedEvent

setEmitter(JIPipeEventEmitter<?, ?>) - Method in class org.hkijena.jipipe.utils.ui.events.MouseReleasedEvent

setEmptyClusterStrategy(KMeansPlusPlusClusterer.EmptyClusterStrategy) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm.ClusteringSettings

setEnable3D(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

setEnable3D(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

setEnable3D(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

setEnable3D(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

setEnable3D(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

setEnable3D(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

setEnable3DDenoising(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

setEnable3DSegmentation(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

setEnable3DSegmentation(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

setEnable3DSegmentation(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

setEnable3DSegmentation(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

setEnable3DSegmentation(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

setEnable3DSegmentation(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

setEnable3DSegmentation(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

setEnable3DSegmentation(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

setEnable3DSegmentation(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

setEnable3DSegmentation(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

setEnableBackups(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeBackupApplicationSettings

setEnabled(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

setEnabled(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

setEnabled(boolean) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotSeriesEditor

setEnabled(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

setEnabled(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings

setEnabled(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

setEnabled(boolean) - Method in class org.hkijena.jipipe.plugins.omero.parameters.AnnotationsToOMEROKeyValuePairExporter

setEnabled(boolean) - Method in class org.hkijena.jipipe.plugins.omero.parameters.OMEROKeyValuePairToAnnotationImporter

setEnabled(boolean) - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameter

setEnableFilter(boolean) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.FilterByAnnotation

setEnableFilter(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.FilterPaths

setEnableFilter(boolean) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm

setEnableFilter(boolean) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm

setEnableFiltering(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

setEnableGPU(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationModelSettings_Old

Deprecated.

setEnableGPU(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2GPUSettings

setEnableMultiChannel(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

setEnableMultiChannel(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

setEnableMultiChannel(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

setEnableNotifications(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

setEnableParallelization(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

setEnableTabContextMenu(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

setEnableWatershed(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm

setEnd(Scene3DLineGeometry.LineEndPoint) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry

setEnforceEdgesWithinMask(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

setEnforceEdgesWithinMask(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

setEnforceEdgesWithinMask(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

setEnforceOverlap(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings

setEnforceOverlap(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

setEnforceSameComponent(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

setEnforceSameComponent(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.SmoothFilamentsAlgorithm

setEngineMode(TesseractOCREngineMode) - Method in class org.hkijena.jipipe.plugins.ijocr.nodes.TesseractOCRAlgorithm

setEnsureMinNumberOfRows(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.GenerateColumnAlgorithm

setEnsureNoPathExists(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

setEntries(List<JIPipeNodeDatabaseEntry>) - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase

setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm

setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm

setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm

setEntries(List<TurboRegTransformationInfo.Entry>) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo

setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.AnnotateWithJsonDataAlgorithm

setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.ExtractJsonDataAsTableAlgorithm

setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.AnnotateWithTextDataAlgorithm

setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.TextDataToTableAlgorithm

setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.AnnotateWithXPathDataAlgorithm

setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm

setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2

setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.SortRowsByExpressionAlgorithm

setEnvironmentName(String) - Method in class org.hkijena.jipipe.plugins.python.installers.SelectCondaEnvPythonInstaller.Configuration

setEnvironmentVariables(StringQueryExpressionAndStringPairParameter.List) - Method in class org.hkijena.jipipe.api.environments.JIPipeProcessArtifactEnvironment

setEnvironmentVariables(StringQueryExpressionAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

setEnvironmentVariables(StringQueryExpressionAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.python.PythonEnvironment

setEnvironmentVariables(StringQueryExpressionAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.r.REnvironment

setEpsilon(int) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm

setEpsilon(double) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm.ClusteringSettings

setEqualHyperstackDimensions(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm

setEqualHyperstackDimensions(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

setEqualizeFrequencies(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm

setEqualizeReplicateLast(boolean) - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNode

setEqualWidthAndHeight(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm

setEqualWidthAndHeight(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

setErosionIterations(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

setErroneousDataTypes(Set<Class<? extends JIPipeData>>) - Method in class org.hkijena.jipipe.JIPipeRegistryIssues

setErroneousNodes(Set<JIPipeNodeInfo>) - Method in class org.hkijena.jipipe.JIPipeRegistryIssues

setErroneousParameterTypes(Set<JIPipeParameterTypeInfo>) - Method in class org.hkijena.jipipe.JIPipeRegistryIssues

setErroneousPlugins(Set<PluginInfo<JIPipeJavaPlugin>>) - Method in class org.hkijena.jipipe.JIPipeRegistryIssues

setError(String) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

setError(Component) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

setErrorExplanation(String) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.CrasherAlgorithm

setErrorSolution(String) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.CrasherAlgorithm

setErrorTitle(String) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.CrasherAlgorithm

setEstimateHighThreshold(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

setEstimateLowThreshold(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

setEstimateSigma(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

setExactValue(double) - Method in class org.hkijena.jipipe.plugins.expressions.NumericFunctionExpression

Sets the expression to an exact value

setExcludeEdgeROIs(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

setExcludeEdges(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

setExcludeEdges(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm

setExcludeEdges(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

setExcludeExistingEndpoints(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

setExcludeOnEdges(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationThresholdSettings

setExcludeOnEdges(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm

setExcludeOnEdges(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationThresholdSettings

setExcludeSelected(boolean) - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRunSettings

setExcludeZero(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByThicknessAlgorithm

setExcludeZero(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm

setExcludeZero(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm

setExcludeZero(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm

setExecutablePath(Path) - Method in class org.hkijena.jipipe.api.environments.JIPipeProcessArtifactEnvironment

setExecutablePath(Path) - Method in class org.hkijena.jipipe.plugins.python.PythonEnvironment

setExecutablePathLinux(Path) - Method in class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

setExecutablePathOSX(Path) - Method in class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

setExecutablePathWindows(Path) - Method in class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

setExpandCanvas(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm

setExpectedNumberOfObjects(int) - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

setExpectedStep(double) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm

setExportAsDisplayed(boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.settings.LegacyImageViewer2DUIApplicationSettings

setExportAsROIFile(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm

Deprecated.

setExportAsROIFile(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm2

setExportDelay(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.MacroWrapperAlgorithm

setExportedParameters(GraphNodeParameterReferenceGroupCollection) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

setExportedParameters(GraphNodeParameterReferenceGroupCollection) - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

setExportedParameters(GraphNodeParameterReferenceGroupCollection) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

setExportedParameters(GraphNodeParameterReferenceGroupCollection) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectInfoParameters

setExportedPreviewSizes(IntegerAndIntegerPairParameter.List) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

setExporter(JIPipeDataByMetadataExporter) - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToFilesByMetadataExporterRun.Settings

setExporterId(String) - Method in class org.hkijena.jipipe.api.compat.ImageJDataExportOperation

setExporterParametersFromUI(JIPipeWorkbench) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.RunImageJExporterAlgorithm

setExporterSettings(OMEExporterSettings) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.OMEImageData

setExporterType(ImageJDataExporterRef) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.RunImageJExporterAlgorithm

setExportFailedLoopInputs(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.ContinueOnFailureSettings

setExportFailedPartitionInputs(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.ContinueOnFailureSettings

setExportHeavyData(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings

setExportHeight(int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

setExportLightweightData(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings

setExportLoopIntermediateResults(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings

setExportLoopTerminating(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings

setExportWidth(int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

setExpression(String) - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

setExpression(PathQueryExpression) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ModifyPath

setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ModifyPathWithExpression

setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.ColorToGreyscaleExpression2D

setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression2DAlgorithm

setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression3DAlgorithm

setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyColorMathExpression2DExpression

setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.FastImageArithmeticsAlgorithm

setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageCalculator2DExpression

setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression

setExpression(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm

setExpression(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm

setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ColorThresholdExpression2D

setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRange

setExpression(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.tables.nodes.ModifyTableColumnNamesAlgorithm

setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.RunExpressionAlgorithm

setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.utils.ui.ExpressionTesterUI

setExpressionC(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

setExpressionList(ExpressionTableColumnGeneratorProcessorParameterList) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm

Deprecated.

setExpressionT(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

setExpressionZ(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

setExtendTarget(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm

setExtendTarget(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementMergingAlgorithm

setExtensionFilters(List<FileNameExtensionFilter>) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPathEditorComponent

setExtensionFilters(String[]) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPathEditorComponent

setExtensions(StringList) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

setExternalDownloaderProcess(JIPipeDownloadsApplicationSettings.DownloadEnvironment) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDownloadsApplicationSettings

setExternalFactor(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

setExternalScriptFile(OptionalPathParameter) - Method in class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptParameter

setExtractRois(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

setExtractRois(boolean) - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

setExtraRuntimePartitions(List<JIPipeRuntimePartition>) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration

setFactorX(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.SmoothFilamentsAlgorithm

setFactorY(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.SmoothFilamentsAlgorithm

setFactoryType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.imagej2.algorithms.CreateIJ2OutOfBoundsFactoryAlgorithm

setFactorZ(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.SmoothFilamentsAlgorithm

setFadeTrackRange(int) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

setFalseNegativeErrorAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm

setFalsePositiveErrorAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm

setFalseString(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.BooleanFormData

setFast(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi2DToRoi3DConverterAlgorithm

setFastMode(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer

setFastMode(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

setFastMode(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationTweaksSettings

setFastSegmentDetection(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

setFeature(SpotFeature) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeatureFilterParameter

setFeature(SpotFeature) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeaturePenaltyParameter

setFeature(TrackFeature) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeatureFilterParameter

setFeatureDescriptorOrientationBins(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SIFTParameters

setFeatureDescriptorSize(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SIFTParameters

setFieldClass(Class<?>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

Sets the field class

setFieldClass(Class<?>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

For internal usage only

setFieldClass(Class<?>) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ParameterColumn

setFieldClassInfoId(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

setFieldClassInfoId(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ParameterColumn

setFieldValue(Object, String, Object) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

Sets the field value

setFieldValue(Class<?>, Object, String, Object) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils

Sets the field value

setFilamentDrawer(FilamentsDrawer) - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.ImageViewerUIFilamentDisplayApplicationSettings

SetFilamentMetadataToComponentIndexAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

SetFilamentMetadataToComponentIndexAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetFilamentMetadataToComponentIndexAlgorithm

SetFilamentMetadataToComponentIndexAlgorithm(SetFilamentMetadataToComponentIndexAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetFilamentMetadataToComponentIndexAlgorithm

setFileChooserType(JIPipeFileChooserApplicationSettings.FileChooserType) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

setFileFilter(FileNameExtensionFilter) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

setFileFormat(ExportImageAlgorithm.FileFormat) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImage2Algorithm

setFileFormat(ExportImageAlgorithm.FileFormat) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

setFileFormat(ExportImageAlgorithm.FileFormat) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm

setFileFormat(ExportTableAlgorithm.FileFormat) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm

Deprecated.

setFileFormat(ExportTableAlgorithm.FileFormat) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm2

setFileFormat(ImportResultsTableAlgorithm.FileFormat) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportResultsTableAlgorithm

setFileFormat(ImpImageOutputFormat) - Method in class org.hkijena.jipipe.plugins.imp.nodes.ExportImpImageAlgorithm

setFileName(Path) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileDataSource

Sets the file name

setFileNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotateWithPathProperties

setFileNameAnnotation(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROTableAlgorithm

setFileNameGenerator(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter

setFileNameGenerator(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROImageToDatasetAlgorithm

setFileNameGenerator(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROTableAlgorithm

setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ConvertToExportedPath

setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter2

setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.ExportROI3DAlgorithm2

setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.ExportIlastikHDF5ImageAlgorithm

setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImage2Algorithm

setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm2

setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm2

setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2

setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsExporter2Algorithm

setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm

setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imp.nodes.ExportImpImageAlgorithm

setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm2

setFiles(List<JIPipeDesktopProjectTemplateDownloaderPackage>) - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderRepository

setFiles(PathList) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileListDataSource

Sets the file names

setFiles(List<NodeTemplateDownloaderPackage>) - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderRepository

setFileSelectionMode(int) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

setFill(Paint) - Method in class org.hkijena.jipipe.utils.ui.RoundedLineBorder

setFillBox(boolean) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Sets the flag that controls whether or not the box is filled and sends a RendererChangeEvent to all registered listeners.

setFillColor(Color) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

setFillColor(Color) - Method in interface org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopColorIcon

setFillColor(Color) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.OverlayJIPipeDesktopColorIcon

setFillColor(Color) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.SolidColorIcon

setFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.TextBoxAnnotationGraphNode.ShapeParameters

setFillColor(Color) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

setFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

setFillColor(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

setFillColor(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

setFillColor(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode

setFillColor(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertTracksToRoiNode

setFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualLocationROIProperties

setFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualROIProperties

setFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

setFillColor(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

setFillColor(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

setFillColor(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

setFillColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

setFillColorAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

setFillGap(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

setFillMeasurement(ROI3DMeasurementColumn) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ColorRoi3DByStatisticsAlgorithm

setFillMeasurement(MeasurementColumn) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm

setFillOutline(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm

setFillOutline(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm

setFillSpots(boolean) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer

setFilter(AnnotationFilterExpression) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.FilterByAnnotation

setFilter(AnnotationFilterExpression) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.FilterByAnnotationIfElse

setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm

setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.FilterFilamentEdgesByProperties

setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.FilterFilamentsByProperties

setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.FilterFilamentVerticesByProperties

setFilter(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm.NewEdgesSettings

setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.parameters.EdgeMaskParameter

setFilter(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.parameters.VertexMaskParameter

setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SpotFilterNode

setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.TrackFilterNode

setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByThicknessAlgorithm

setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm

setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromGlobalParametersAlgorithm

setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.omero.parameters.AnnotationsToOMEROKeyValuePairExporter

setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.omero.parameters.OMEROKeyValuePairToAnnotationImporter

setFilter(TableCellValueQueryExpression) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnsToAnnotationsAlgorithm

setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm

setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm

setFilterExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.RemoveROI3DMetadataAlgorithm

setFilterExpression(PathQueryExpression) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

setFilterExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata.RemoveImageMetadataAlgorithm

setFilterExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.RemoveROIMetadataAlgorithm

setFilterFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

setFilterFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

setFilterLargeDiameter(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter

setFilterListHideInvisible(boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

setFilterListOnlySelected(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

setFilterListOnlySelected(boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

setFilters(PathQueryExpression) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.FilterPaths

setFilters(PathQueryExpression) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListFiles

setFilters(PathQueryExpression) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListSubfolders

setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm

setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm

setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm

setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm

setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListDatasetImagesAlgorithm

setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListDatasetsAlgorithm

setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListGroupsAlgorithm

setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListPlatesAlgorithm

setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListProjectsAlgorithm

setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListScreensAlgorithm

setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListWellImagesAlgorithm

setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListWellsAlgorithm

setFilters(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnToNumericAlgorithm

setFilters(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnToStringAlgorithm

setFilters(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RemoveColumnAlgorithm

setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.filter.FilterTableRowsAlgorithm

setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.filter.FilterTablesAlgorithm

setFilterSmallDiameter(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter

setFindPath(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

setFirst(ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceCube

setFirstAuthor(boolean) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

setFirstColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm

setFirstIndex(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

setFirstName(String) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

setFitMode(SizeFitMode) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

setFlattenC(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.FlattenRoiAlgorithm

setFlattenT(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.FlattenRoiAlgorithm

setFlattenZ(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.FlattenRoiAlgorithm

setFlip(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Reslicer

setFlipMode(TransformFlip2DAlgorithm.FlipMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformFlip2DAlgorithm

setFlipTemplateHorizontally(boolean) - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

setFlipTemplateVertically(boolean) - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

setFlipVertical(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ResliceAlgorithm

setFloatingPanelMarginBottom(int) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

setFloatingPanelMarginLeftRight(int) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

setFloatingPanelMarginTop(int) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

setFloatingPointOutput(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DAlgorithm

Deprecated.

setFloatingPointOutput(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DMergingAlgorithm

Deprecated.

setFlow3DSmoothing(double) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTweaksSettings

setFlowThreshold(double) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationThresholdSettings_Old

Deprecated.

setFlowThreshold(double) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationThresholdSettings

setFlowThreshold(double) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationThresholdSettings

setFolderPath(Path) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderDataSource

Sets the folder path

setFolderPaths(PathList) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderListDataSource

Sets the folder path

setFontFamily(FontFamilyParameter) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters

setFontFamily(FontFamilyParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings

setFontFamily(FontFamilyParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

setFontFamily(FontFamilyParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings

setFontFamily(FontFamilyParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

setFontFamily(FontFamilyParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

setFontSize(int) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters

setFontSize(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings

setFontSize(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

setFontSize(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

setFontSize(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

setFontSize(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings

setFontSize(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

setFontSize(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

setFontSize(T, int) - Static method in class org.hkijena.jipipe.utils.UIUtils

setFontStyle(FontStyleParameter) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters

setFontStyle(FontStyleParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings

setFontStyle(FontStyleParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

setFontStyle(FontStyleParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings

setFontStyle(FontStyleParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

setFontStyle(FontStyleParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

setForce2D(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi2DToRoi3DConverterAlgorithm

setForce2D(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.SkeletonToFilaments2DAlgorithm

setForce2D(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DerivativesFeaturesAlgorithm

setForce2D(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.HessianFeatureAlgorithm

setForce2D(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.StructureFeatureAlgorithm

setForcedLineThickness(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

setForcedLineThickness(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm

setForcedLineThickness(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm

setForcedLineThickness(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm

setForcedLineThickness(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm

setForcedVertexRadius(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

setForcedVertexRadius(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm

setForcedVertexRadius(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm

setForcedVertexRadius(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm

setForcedVertexRadius(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm

setForceFlowGraphSolver(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

setForceFlowGraphSolver(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

setForceFlowGraphSolver(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

setForceFlowGraphSolver(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings

setForceFlowGraphSolver(boolean) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

setForceGlobalTempDirectory(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDataStorageProjectSettings

setForceMeshLengthUnit(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm

setForceMeshLengthUnit(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

setForceMeshLengthUnit(boolean) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.MaskTo3DMeshAlgorithm

setForceNAIsAny(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

setForceNAIsAny(boolean) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

setForceName(boolean) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter

setForceName(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter2

setForceNativeImport(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

setForceNativeImport(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImagePlusAlgorithm

setForceNumColumns(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

setForceNumRows(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

setForcePassThroughLoopIterationInCaching(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

setForceReflection(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

setForceRGB(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

setForegroundColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

setForegroundColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

setFrame(int) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

setFrame(int) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.NonSpatialPoint3d

setFrameLocation(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

setFrameLocation(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

setFrameLocation(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

setFramesSizeAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

setFramesSizeAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

setFrom(JIPipeDataSlotInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder

setFullId(String) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

setFullPath(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimplePathAnnotationGenerator

setFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

setFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateFromMathExpression2D

setFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

setFunctional(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

setFunctions(StringPatternExtractionFunction.List) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractAndReplaceAnnotation

setFuzziness(double) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm

setGamma(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

setGamma(double) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaborKernelGenerator

setGaussianKernelRadius(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm

setGaussianKernelWidth(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm

setGaussianSigma(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm

setGaussianStd(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXInitializationParameters

setGaussPC(double) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.GaussianFitSpotSegmentation3DAlgorithm

setGaussSigma(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

setGenerateCachePreviews(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

setGenerateConnectedComponents(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

setGenerateConnectedComponents(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2TrainingTweaksSettings

setGenerateConnectedComponents(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

setGenerateConnectedComponents(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTrainingTweaksSettings

setGenerateConnectedComponents(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeTrainingTweaksSettings

setGeneratedAnnotation(String) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithDataString

Sets generated annotation type

setGeneratedAnnotation(String) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithSourceSlot

Sets generated annotation type

setGeneratedAnnotation(String) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.GenerateRandomUniqueAnnotation

Sets generated annotation type

setGeneratedAnnotation(String) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.GenerateUniqueAnnotation

Sets generated annotation type

setGeneratedAnnotation(String) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimpleFileAnnotationGenerator

Sets generated annotation type

setGeneratedAnnotation(String) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimpleFolderAnnotationGenerator

Sets the generated annotation type

setGeneratedAnnotation(String) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimplePathAnnotationGenerator

setGeneratedAnnotation(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.ExplodeRoi3DListAlgorithm

setGeneratedAnnotation(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.ExplodeRoiAlgorithm

setGeneratedAnnotation(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableIntoColumnsAlgorithm

setGeneratedAnnotationName(String) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SimplifyAnnotationsAlgorithm

setGeneratedAnnotations(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByProjectPaths

setGeneratedAnnotations(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateDataWithTableValues

setGeneratedColumns(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator

setGeneratedImageType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageAlgorithm

setGeneratedImageType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

setGeneratedImageType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImagePlusAlgorithm

setGeneratedRows(int) - Method in class org.hkijena.jipipe.plugins.tables.nodes.GenerateTableFromExpressionAlgorithm

setGeneratedType(ColumnContentType) - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnGeneratorParameter

setGeneratedValues(DynamicStringSetParameter) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.EnumParameterGenerator

setGenerateOnePerBatch(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

setGenerateOnePerBatch(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingZeroImage

setGenerateResultPreviews(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

setGeneratorType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnGeneratorParameter

setGetDams(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm

setGetter(Supplier<Object>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

Sets the getter

setGetter(Method) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

setGlobalParameters(JIPipeDynamicParameterCollection) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

setGpuDevice(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2GPUSettings

setGradient(OrientationJGradientOperator) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJStructureTensorParameters

setGradientRadius(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

setGradientStops(List<ColorUtils.GradientStop>) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.LUTData

setGraph(JIPipeGraph) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

setGraph(JIPipeGraph) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection

setGraphAnnotationsLocked(boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

setGraphEditCursor(Point) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

setGraphEditor(AbstractJIPipeDesktopGraphEditorUI) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool

setGraphEditor(AbstractJIPipeDesktopGraphEditorUI) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool

setGraphEditor(AbstractJIPipeDesktopGraphEditorUI) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool

setGraphEditor(AbstractJIPipeDesktopGraphEditorUI) - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool

setGraphEditor(AbstractJIPipeDesktopGraphEditorUI) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool

setGraphEditor(AbstractJIPipeDesktopGraphEditorUI) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

setGraphEditor(AbstractJIPipeDesktopGraphEditorUI) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool

setGraphPostprocessing(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

setGraphRun(JIPipeGraphRun) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNodeRunContext

Sets the JIPipeGraphRun that is currently executing

setGreen(int) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

setGreenRedThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

setGreenThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

setGreyscaleCorrection(boolean) - Method in class org.hkijena.jipipe.plugins.imp.nodes.ImportImpImageAlgorithm

setGridColor(Color) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

setGridHeight(int) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode

setGridSize(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm

setGridWidth(int) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode

setGroupId(String) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

setGroupId(long) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROGroupReferenceData

setGroupIds(LongList) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROGroupReferenceDataSource

setGrouping(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

setGroupingDelta(int) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

setGroupingDistanceThreshold(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

setGroupName(String) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.GroupSceneAlgorithm

setHarrisK(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

setHarrisL(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

setHasParameterSlot(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings

sethBarWidth(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

setHdf5Path(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.ExportIlastikHDF5ImageAlgorithm

setHdf5Path(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.ImportIlastikHDF5ImageAlgorithm

setHeading(String) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification

setHeight(int) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Action

setHeight(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap

setHeight(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateZeroImage

setHeight(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateFromMathExpression2D

setHeight(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

setHeight(int) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaborKernelGenerator

setHeight(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

setHeightAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

setHeightAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

setHeightTolerance(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm

setHelpPanel(JIPipeDesktopFormHelpPanel) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

setHidden(boolean) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

setHidden(boolean) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

setHidden(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

Sets the visibility

setHidden(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

setHidden(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

setHidden(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

setHidden(boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

setHideLabels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings

setHideLabels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings

setHideText(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

setHideToolbars(boolean) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

setHighlightColor(Color) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

setHighlightedComponents(Set<Component>) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel.FormPanelContentPanel

setHighThreshold(float) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.HysteresisSegmentation3DAlgorithm

setHighThreshold(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm

setHistogramNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

setHistogramType(HistogramJFreeChartPlotData.HistogramType_) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

sethLabel(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

setHollowVertices(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

setHollowVertices(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

setHorizontalBarSize(OptionalQuantity) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

setHorizontalBarSize(OptionalQuantity) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

setHorizontalLabel(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings

setHorizontalLabel(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings

setHost(String) - Method in class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment

setHoughArrayNMSNeighborhoodSize(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

setHoughArrayNMSNeighborhoodSize(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

setHueThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

setIcon(String) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData

setIcon(IconRef) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

setIcon(Icon) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction

setIcon(Image) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

setIcon(JIPipeDesktopColorIcon) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopColorChooserButton

setIcon(IconRef) - Method in class org.hkijena.jipipe.plugins.core.nodes.JIPipeCommentNode

setIcon(Icon) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

setIconName(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.IconRef

setIconSelected(Icon) - Method in class org.hkijena.jipipe.utils.CustomStateLessToggleButton

setIconUnselected(Icon) - Method in class org.hkijena.jipipe.utils.CustomStateLessToggleButton

setIconURL(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

setId(String) - Method in class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext

setId(String) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

setId(String) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

Sets the ID

setId(String) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddParameterDialog.Settings

setId(String) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

setId(String) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Task

setId(String) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

Sets the ID

setId(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExporterRef

setId(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

setId(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImporterRef

setId(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRef

setId(String) - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnConversionParameter

Sets the ID of the selected entry

setId(String) - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnIntegrationParameter

Sets the ID of the selected entry

setIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm

setIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm

setIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROPlateReferenceAlgorithm

setIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm

setIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

setIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

setIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROImageAlgorithm

setIgnoreAnnotationColumnsOnTrivialMatch(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

setIgnoreC(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

setIgnoreC(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm

setIgnoreC(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

setIgnoreC(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

setIgnoreC(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

setIgnoreC(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

setIgnoreC(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

setIgnoreC(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

setIgnoreC(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

setIgnoreC(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

setIgnoreC(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

setIgnoreCustomParameters(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

setIgnoreDeactivatedInputs(boolean) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

setIgnoreDeclaration(boolean) - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.PrettifyXMLAlgorithm

setIgnoreEmptyTables(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm

setIgnoreErrors(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process.OutlineRoi3DAlgorithm

setIgnoreIfHasPath(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

setIgnoreImportedDataAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableArchive

setIgnoreImportedDataAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableDirectory

setIgnoreImportedDataAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.ImportJIPipeSlotFolderAlgorithm

setIgnoreImportedTextAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableArchive

setIgnoreImportedTextAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableDirectory

setIgnoreImportedTextAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.ImportJIPipeSlotFolderAlgorithm

setIgnoreInputDataAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableArchive

setIgnoreInputDataAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableDirectory

setIgnoreInputDataAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.ImportJIPipeSlotFolderAlgorithm

setIgnoreInputTextAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableArchive

setIgnoreInputTextAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableDirectory

setIgnoreInputTextAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.ImportJIPipeSlotFolderAlgorithm

setIgnoreInvalidSlices(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

setIgnoreInvalidValues(boolean) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.AnnotationsToParametersAlgorithm

setIgnoreLimitConnectionsForSource(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

setIgnoreLimitConnectionsForSource(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

setIgnoreLimitConnectionsForTarget(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

setIgnoreLimitConnectionsForTarget(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

setIgnoreMissingAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractDataAnnotation

setIgnoreMissingAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm

setIgnoreMissingChannels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm

setIgnoreMissingChannels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsAlgorithm

Deprecated.

setIgnoreMissingChannels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

setIgnoreMissingColumns(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm

setIgnoreMissingImages(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

setIgnoreMissingOutputs(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

setIgnoreMissingRoiIndices(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.SetROI3DMetadataFromTableAlgorithm

setIgnoreMissingRoiIndices(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetROIMetadataFromTableAlgorithm

setIgnoreMissingSheets(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportResultsTableAlgorithm

setIgnoreMissingSlices(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm

setIgnoreNodeFunctionalEquals(boolean) - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache

setIgnoreNon2DEdges(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm

setIgnorePreActivationChecks(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeExtensionApplicationSettings

setIgnoreReflectionParameters(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

setIgnoreT(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

setIgnoreT(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm

setIgnoreT(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

setIgnoreT(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

setIgnoreT(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

setIgnoreT(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

setIgnoreT(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

setIgnoreT(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

setIgnoreT(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

setIgnoreT(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

setIgnoreT(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

setIgnoreValidation(boolean) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.RunJIPipeProjectAlgorithm

setIgnoreZ(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

setIgnoreZ(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

setIgnoreZ(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

setIgnoreZ(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ExtractImageInRoiAlgorithm

setIgnoreZ(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

setIgnoreZ(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

setIgnoreZ(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

setIgnoreZero(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm

setImage(BufferedImage) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneGhostGlassPane

setImage(ImageParameter) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

setImage(ImagePlusData) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

setImage(ImagePlus) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

Deprecated.

setImage(BufferedImage, ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

setImage(BufferedImage) - Method in class org.hkijena.jipipe.plugins.parameters.library.images.ImageParameter

setImageArea(Margin) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm

setImageArea(Margin) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

setImageData(ImagePlusData) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

setImageFile(Path) - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail

setImageFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ImagePlusFromGUI

setImageFiltersOperation(LogicalOperation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ImagePlusFromGUI

setImageHeightAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

setImageHeightAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

setImageHeightAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm

setImageId(long) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROImageReferenceData

setImageIds(LongList) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROImageReferenceDataSource

setImageJUpdateSiteDependencies(List<JIPipeImageJUpdateSiteDependency>) - Method in class org.hkijena.jipipe.JIPipeMutableDependency

setImageJUpdateSites(List<JIPipeImageJUpdateSiteDependency>) - Method in class org.hkijena.jipipe.JIPipeMutableDependency

SetImageMetadataFromTableAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata

SetImageMetadataFromTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata.SetImageMetadataFromTableAlgorithm

SetImageMetadataFromTableAlgorithm(SetImageMetadataFromTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata.SetImageMetadataFromTableAlgorithm

setImagePlus(ImagePlus) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.JIPipeDesktopLegacyImageViewer

setImageProperties(ImagePlus, Map<String, String>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Sets the properties of a ImagePlus from a map

setImageRegistrationFeatureModel(SimpleImageRegistrationFeatureModel) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationParameters

setImageRegistrationModel(SimpleImageRegistrationModel) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationParameters

setImageSubsamplingFactor(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

setImageTitle(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata.ChangeImageMetadataFromExpressionsAlgorithm

setImageTypeAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

setImageTypeAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

setImageWeight(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

setImageWidthAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

setImageWidthAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

setImageWidthAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm

SetImpAlphaChannelAlgorithm - Class in org.hkijena.jipipe.plugins.imp.nodes

SetImpAlphaChannelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imp.nodes.SetImpAlphaChannelAlgorithm

SetImpAlphaChannelAlgorithm(JIPipeIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imp.nodes.SetImpAlphaChannelAlgorithm

setImportant(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

Allows to make the parameter important (only for UI)

setImportant(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

setImportant(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

setImportDelay(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.MacroWrapperAlgorithm

setImporterId(String) - Method in class org.hkijena.jipipe.api.compat.ImageJDataImportOperation

setImporterParametersFromUI(JIPipeWorkbench) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.RunImageJImporterAlgorithm

setImporterType(ImageJDataImporterRef) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.RunImageJImporterAlgorithm

setImproved(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.SymmetryFilter3DAlgorithm

setInbox(JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification

setIncludeHoles(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

setIncrements(IntegerList) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData

setIndent(int) - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.PrettifyXMLAlgorithm

setIndex(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableRowInfo

Sets the location

setIndex(int) - Method in class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceParameter

setIndexAnnotation(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm

setIndexAnnotation(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm

setIndexColumn(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.ExtractROI3DMetadataAlgorithm

setIndexColumn(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.ExtractROIMetadataAlgorithm

setIndexIncrement(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

setIndexMeshes(boolean) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm

Deprecated.

setIndexMeshes(boolean) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm2

setIndexMeshes(boolean) - Method in class org.hkijena.jipipe.plugins.scene3d.utils.Scene3DToColladaExporter

setIndicesC(IntegerRange) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm

setIndicesT(IntegerRange) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm

setIndicesZ(IntegerRange) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm

setInfo(JIPipeNodeInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Sets the JIPipeNodeInfo that describes this algorithm.

setInfo(JIPipeDataInfo) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRef

setInfo(JIPipeNodeInfo) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeNodeInfoRef

setInfo(JIPipeParameterTypeInfo) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeParameterTypeInfoRef

setInheritanceConversions(Map<JIPipeDataInfo, JIPipeDataInfo>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder

Deprecated.

setInheritedSlot(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder

Deprecated.

setInitialDirectory(Path) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

setInitialSigma(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SIFTParameters

setInitZ(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXInitializationParameters

setInput(I) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter

setInputAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.forms.utils.SingleAnnotationIOSettings

setInputColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm

setInputColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

setInputColumns(TableColumnSourceExpressionParameter.List) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm

setInputColumns(TableColumnSourceExpressionParameter.List) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm

setInputColumns(TableColumnSourceExpressionParameter.List) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm

setInputData(JIPipeDataSlot, int) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Sets the input slot to only one row

setInputData(JIPipeDataSlot, int) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Sets the data row of a given slot.

setInputIsEDM(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm

setInputMasks(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

setInputNMSNeighborhoodSize(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

setInputNMSNeighborhoodSize(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

setInputSealed(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Seals/Unseals input slots

setInputSlots(List<AddJIPipeInputSlot>) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

Sets the input slots

setInsets(Rectangle) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.OverlayJIPipeDesktopColorIcon

setInsets(Insets) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Action

setInstallDir(String) - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

setInstance(JIPipeJavaPlugin) - Method in class org.hkijena.jipipe.JIPipeJavaExtensionInitializationInfo

setInstanceGenerator(Function<JIPipeDynamicParameterCollection.UserParameterDefinition, JIPipeMutableParameterAccess>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

setIntegrationFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator

setIntegrationFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm

setIntegrationFunctionBackground(TableColumnIntegrationParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator

setIntegrationFunctionBackground(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator

setIntegrationFunctionForeground(TableColumnIntegrationParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator

setIntegrationFunctionForeground(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator

setIntegrationScale(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.StructureFeatureAlgorithm

setIntensityHistogram2D(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

setIntensityScaling(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXInitializationParameters

setInternalGradientRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

setInternalPath(String) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableArchive

setInternalStoragePath(Path) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

setInternalStoragePath(Path) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Sets the internal storage path relative to the output folder.

setInterpolate(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationEnhancementSettings_Old

Deprecated.

setInterpolate(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationTweaksSettings

setInterpolate(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTweaksSettings

setInterpolate(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationParameters

setInterpolate(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationTweaksSettings

setInterpolationMethod(InterpolationMethod) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

setInterpolationMethod(InterpolationMethod) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm

setInterpolationMethod(InterpolationMethod) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.ImageParameters

setInverse(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.binary.DistanceMap3DAlgorithm

setInverse(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.binary.ErodedVolumeFraction3DAlgorithm

setInvert(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2ChannelSettings

setInvert(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

setInvert(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.BinarizeAlgorithm

setInvert(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.FrangiVesselnessFeatures

setInvert(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures

setInvert(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings

setInvert(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm

Deprecated.

setInvert(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

setInvertedMode(NumberRangeInvertedMode) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI.TrackRenderer

setInvertThreshold(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.MaskToRoiAlgorithm

setInvertThreshold(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator

setInvertThreshold(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator

setInvertThreshold(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator

setInvertTransform(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.Warp2DAlgorithm

setIoMode(PathIOMode) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPathEditorComponent

setIoMode(PathIOMode) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

setIsotropicGaussian(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DerivativesFeaturesAlgorithm

setIsotropicGaussian(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.HessianFeatureAlgorithm

setIsotropicGaussian(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.StructureFeatureAlgorithm

setItemComparator(Comparator<T>) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopPickerDialog

setItemMargin(double) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Sets the item margin and sends a RendererChangeEvent to all registered listeners.

setItems(JIPipeValidationReport) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.properties.JIPipeDesktopGraphEditorErrorPanel

setItems(Throwable) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.properties.JIPipeDesktopGraphEditorErrorPanel

setItems(StringAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.EnumFormData

setIteratePerC(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

setIteratePerT(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

setIteratePerZ(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

setIterationMode(JIPipeGraphWrapperAlgorithm.IterationMode) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

setIterationMode(JIPipeGraphWrapperAlgorithm.IterationMode) - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

setIterationMode(JIPipeGraphWrapperAlgorithm.IterationMode) - Method in class org.hkijena.jipipe.api.grouping.JsonAlgorithm

setIterationMode(JIPipeGraphWrapperAlgorithm.IterationMode) - Method in class org.hkijena.jipipe.api.looping.LoopStartNode

Deprecated.

setIterationMode(JIPipeGraphWrapperAlgorithm.IterationMode) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

setIterations(int) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ErodeEndVerticesAlgorithm

setIterations(int) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm

setIterations(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.RemoveLargestRegionAlgorithm

setIterations(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.RemoveLargestLabelAlgorithm

setIterations(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm

setIterationStepIndexAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm

setIterationStepIndexAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm

setJaccardIndexAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm

setJIPipe(JIPipe) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopSplashScreen

SetJIPipeDocumentation - Annotation Type in org.hkijena.jipipe.api

Used within JIPipe to annotate types and methods with documentation

setJpegQuality(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImage2Algorithm

setJpegQuality(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

setJpegQuality(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm

setJsonPath(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.AnnotateWithJsonDataAlgorithm.Entry

setJsonPath(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.ExtractJsonDataAsTableAlgorithm.Entry

setJsonPath(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.strings.nodes.json.ExtractTextFromJsonAlgorithm

setJTextPaneFont(JTextPane, Font, Color) - Static method in class org.hkijena.jipipe.utils.UIUtils

Utility method for setting the font and color of a JTextPane.

setK(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm

setK(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm

setK(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm

setK(int) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm

setK(int) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm

setKeepAnnotationColumns(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.ConvertAnnotationTableToAnnotatedTables

setKeepCurrentAnnotation(boolean) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractDataAnnotation

setKeepDataAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.DataAnnotationToStringAnnotation

setKeepOriginalAnnotations(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm

setKeepOriginalAnnotations(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm

setKeepOriginalAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm

setKeepOriginalAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm

setKeepOtherDataAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ExtractDataAnnotation

setKeepSameChannelCount(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm

setKeepValues(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByIdAlgorithm

setKendallTauRankCorrelation(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

setKernelFunction(String) - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelIterating

setKernelFunction(String) - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelSimpleIterating

setKernelScript(OpenCLKernelScript) - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelIterating

setKernelScript(OpenCLKernelScript) - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelSimpleIterating

setKernelX(Quantity) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersAlgorithm

setKernelY(Quantity) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersAlgorithm

setKernelZ(Quantity) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersAlgorithm

setKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

Sets the unique key

setKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

For internal use only

setKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

setKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

setKey(String) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectDirectories.DirectoryEntry

setKey(String) - Method in class org.hkijena.jipipe.desktop.commons.components.parameters.JIPipeDesktopDynamicParameterEditorDialog.ParameterEntry

setKey(String) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.ProjectUserFolderDataSource

setKey(String) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.utils.FilamentEdgeMetadataEntry

setKey(String) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.utils.FilamentsVertexMetadataEntry

setKey(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm.MetadataProperty

setKey(String) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column

setKey(String) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column

setKey(K) - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameter

setKey(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ParameterColumn

setKey(String) - Method in class org.hkijena.jipipe.utils.scripting.MacroFlag

setKey(String) - Method in class org.hkijena.jipipe.utils.scripting.MacroSetting

setKeyColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm

setKeyColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator

setKeyColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

setKeyValuePairKey(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.omero.parameters.AnnotationsToOMEROKeyValuePairExporter

setKeyValuePairValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.omero.parameters.AnnotationsToOMEROKeyValuePairExporter

setkMeansK(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.OutlineRoiConcaveHullMoreiraSantosAlgorithm

setLabel(String) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction

setLabel(String) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

setLabel(String) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Task

setLabel(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm.ROINameToLabelEntry

setLabel(String) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.RelabeledTableColumnData

setLabelAll(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

setLabelAssignment(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm

setLabelBackground(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.DrawerLabelSettings

setLabelBackground(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

setLabelBackground(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

setLabelBackground(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelParameters

setLabelBackground(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

setLabelDataAnnotation(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

setLabelDataAnnotation(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

setLabelDataAnnotation(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

setLabelDataAnnotation(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

setLabelDataAnnotation(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

setLabelDataAnnotation(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingLabels2DAlgorithm2

setLabelDataAnnotation(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingMask2DAlgorithm2

setLabelDataAnnotation(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

setLabelDataAnnotation(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

setLabelExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

setLabelFontFamily(FontFamilyParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

setLabelFontFamily(FontFamilyParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelParameters

setLabelFontFamily(FontFamilyParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

setLabelFontSize(int) - Method in class org.hkijena.jipipe.plugins.pipelinerender.RenderPipelineRunSettings

setLabelFontSize(int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.Pie2DJFreeChartPlotData

setLabelFontSize(int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.Pie3DJFreeChartPlotData

setLabelForeground(Color) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.DrawerLabelSettings

setLabelForeground(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

setLabelForeground(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

setLabelForeground(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelParameters

setLabelForeground(Color) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

setLabelIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.CropLabelsAlgorithm

setLabelIdLimit(OptionalIntegerRange) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.CropLabelsAlgorithm

setLabelIndexAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.SeparateLabelsAlgorithm

setLabeling(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.HysteresisSegmentation3DAlgorithm

setLabelLocation(Anchor) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelParameters

setLabelNameExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm

setLabels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

setLabelSelected(String) - Method in class org.hkijena.jipipe.utils.CustomStateLessToggleButton

setLabelSize(int) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.DrawerLabelSettings

setLabelSize(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

setLabelSize(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

setLabelSize(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelParameters

setLabelSize(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

setLabelUnselected(String) - Method in class org.hkijena.jipipe.utils.CustomStateLessToggleButton

setLambd(double) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaborKernelGenerator

setLambdaPerceptual(double) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

setLambdaReconstruction(double) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

setLambdaSegmentation(double) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

setLandmarkWeight(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

setLanguage(ScriptLanguage) - Method in class org.hkijena.jipipe.utils.CustomEditorPane

setLanguages(DynamicStringSetParameter) - Method in class org.hkijena.jipipe.plugins.ijocr.nodes.TesseractOCRAlgorithm

setLastConfiguredArtifact(JIPipeLocalArtifact) - Method in class org.hkijena.jipipe.api.environments.JIPipeArtifactEnvironment

setLastDataDirectory(Path) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

setLastDateTimeInfo(String) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupSessionInfo

setLastDirectoryBy(JIPipeFileChooserApplicationSettings.LastDirectoryKey, Path) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

Sets the last directory according to the key

setLastExternalDirectory(Path) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

setLastFillRect(Rectangle) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

setLastIndex(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

setLastModifiedTime(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotateWithPathProperties

setLastName(String) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

setLastParametersDirectory(Path) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

setLastProjectsDirectory(Path) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings

setLastValue(Object, String) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

setLayoutAfterAlgorithmFinder(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setLayoutAfterConnect(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setLearningRate(double) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

setLearningRate(double) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2TrainingTweaksSettings

setLearningRate(double) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

setLearningRate(double) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTrainingTweaksSettings

setLearningRate(double) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeTrainingTweaksSettings

setLeft(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

setLeft(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.InnerMargin

setLeft(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

setLeftPanelIsFloating(boolean) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

setLeftPanelWidth(int) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

setLeftPanelWidth(int) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.State

setLeftSplitPaneRatio(double) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.State

setLegacy(boolean) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItemCollection

setLegendFontSize(int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

setLengthRange(Vector2dParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

setLibraryDirectory(Path) - Method in class org.hkijena.jipipe.plugins.python.PythonPackageLibraryEnvironment

setLicense(String) - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

Sets the license

setLightnessThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

setLiHistogramChannel1(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

setLiHistogramChannel2(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

setLiICQ(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

setLimit(OptionalIntegerRange) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

setLimit(OptionalIntegerRange) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings

setLimit(OptionalIntegerRange) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

setLimit(OptionalIntegerRange) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings

setLimit(OptionalIntegerRange) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm.IterationStepGenerationSettings

setLimit(OptionalIntegerRange) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithmIterationStepGenerationSettings

setLimit(IntegerRange) - Method in class org.hkijena.jipipe.plugins.tables.nodes.filter.SliceTableRowsAlgorithm

setLimit(IntegerRange) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.SelectDataTableRowsAlgorithm

setLimitConnections(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

setLimitConnections(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

setLimitConnectionsLengthSortOrder(SortOrder) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

setLimitWithEllipsis(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.LabelParameters

setLineColor(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode

setLineColor(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertTracksToRoiNode

setLineColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualLocationROIProperties

setLineColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualROIProperties

setLineColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

setLineColor(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

setLineColor(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

setLineColor(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

setLineColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

setLineColorAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

setLineDimension(int) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData

setLineLength(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm

setLineMeasurement(MeasurementColumn) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm

setLineSize(int) - Method in class org.hkijena.jipipe.utils.ui.RoundedLineBorder

setLineThickness(int) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ArrowAnnotationGraphNode

setLineThickness(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm

setLineThickness(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm

setLineThickness(int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.LineCategoryJFreeChartPlotData

setLineThickness(int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.LineStatisticalCategoryJFreeChartPlotData

setLineThickness(int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.LineXYJFreeChartPlotData

setLineWidth(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode

setLineWidth(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertTracksToRoiNode

setLineWidth(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualLocationROIProperties

setLineWidth(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualROIProperties

setLineWidth(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

setLineWidth(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

setLineWidth(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

setLineWidth(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

setLineWidth(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

setLineWidth(double) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

setLineWidthAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

setLink(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.ImportIlastikModel

setLoaded(boolean) - Method in class org.hkijena.jipipe.JIPipeJavaExtensionInitializationInfo

setLoadFromArtifact(boolean) - Method in class org.hkijena.jipipe.api.environments.JIPipeArtifactEnvironment

setLoadFromCache(boolean) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

setLoadFromCache(boolean) - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRunSettings

setLoadsSynchronously(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Sets how the image is loaded.

setLocal(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

setLocalBackground(int) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.ConstantSpotSegmentation3DAlgorithm

setLocalPath(Path) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeLocalArtifact

setLocalRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

setLocalWindowHeight(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression

setLocalWindowSigma(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJStructureTensorParameters

setLocalWindowWidth(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression

setLocation(ScaleBarGenerator.ScaleBarPosition) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

setLocation(ScaleBarGenerator.ScaleBarPosition) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

setLocation(ScaleBarGenerator.ScaleBarPosition) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

setLocation(FixedMargin) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

setLocation(JIPipeDesktopDockPanel.PanelLocation) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

setLocationCAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

setLocationMergingFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.SmoothFilamentsAlgorithm

setLocations(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm

setLocations(Map<String, JIPipeDesktopDockPanel.PanelLocation>) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.State

setLocationTAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

setLocationXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

setLocationYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

setLocationZAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

setLogarithmic(boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.TrackRenderer

setLogarithmic(boolean) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI.TrackRenderer

setLogicalOperation(LogicalOperation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.BitwiseLogicalOperationAlgorithm

setLogInterval(long) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfoETA

Sets the log interval (milliseconds)

setLogLimit(int) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

setLogToStdOut(boolean) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

setLoopEndNodes(Set<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.looping.LoopGroup

setLoopIterationIteratingSettings(JIPipeIteratingAlgorithmIterationStepGenerationSettings) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

setLoopIterationMergingSettings(JIPipeMergingAlgorithmIterationStepGenerationSettings) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

setLoopStartNode(LoopStartNode) - Method in class org.hkijena.jipipe.api.looping.LoopGroup

setLowerThreshold(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

setLowThreshold(float) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.HysteresisSegmentation3DAlgorithm

setLowThreshold(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm

setLut(ImagePlus, LUT, Set<Integer>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

setLutFromColorMap(ImagePlus, ColorMap, Set<Integer>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

SetLUTFromColorMapAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut

SetLUTFromColorMapAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorMapAlgorithm

SetLUTFromColorMapAlgorithm(SetLUTFromColorMapAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorMapAlgorithm

SetLUTFromColorsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut

SetLUTFromColorsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm

SetLUTFromColorsAlgorithm(SetLUTFromColorsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm

SetLUTFromImageAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut

SetLUTFromImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromImageAlgorithm

SetLUTFromImageAlgorithm(SetLUTFromImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromImageAlgorithm

setMagnification(double) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SpotsToRGBNode

setMagnification(double) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.TracksToRGBNode

setMagnification(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

setMagnification(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

setMaintainer(String) - Method in class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency

setMakeFilesystemCompatible(boolean) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter

setMandersCorrelation(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

setManualOrder(StringList) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.SortTableColumnsAlgorithm

setMapFillColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ColorRoi3DByNameAlgorithm

setMapFillColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ColorRoi3DByStatisticsAlgorithm

setMapFillColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByNameAlgorithm

setMapFillColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm

setMapFillColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm

Deprecated.

setMapFillColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2

setMapLineColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByNameAlgorithm

setMapLineColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm

setMapLineColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm

Deprecated.

setMapLineColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2

setMarginBottom(int) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters

setMarginBottom(int) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

setMarginBottom(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm

setMarginLeft(int) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters

setMarginLeft(int) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

setMarginLeft(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm

setMarginRight(int) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters

setMarginRight(int) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

setMarginRight(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm

setMarginTop(int) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters

setMarginTop(int) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

setMarginTop(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm

setMask(ImagePlus) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

setMaskColor(Color) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

setMaskGenerator(Function<ImagePlus, ImagePlus>) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

setMaskThreshold(double) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationThresholdSettings

setMatrix(Matrix2DFloat) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve.ConvolveByParameter2DAlgorithm

setMatrix(Matrix2DFloat) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.ImageFromMatrix2DAlgorithm

setMax(float) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.FloatNumberRangeParameter

setMax(int) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.IntNumberRangeParameter

setMaxBlueThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

setMaxBlueYellowThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

setMaxBrightnessThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

setMaxCounter(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm

setMaxDistance(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm

setMaxDistance(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm

setMaxDistance(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm

setMaxDistanceMetadataKey(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FindLinearFilamentVertexOrderAlgorithm

setMaxDownsampling(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseSettings

setMaxEdgeWidth(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.pipelinerender.RenderPipelineRunSettings

setMaxEntries(int) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeHistoryJournalApplicationSettings

setMaxEpsilon(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationParameters

setMaxGreenRedThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

setMaxGreenThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

setMaxHueThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

setMaximizeWindows(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

setMaximumBarWidth(double) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Sets the maximum bar width, which is specified as a percentage of the available space for all bars, and sends a RendererChangeEvent to all registered listeners.

setMaximumForeground(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXInitializationParameters

setMaximumIterations(int) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXConvergenceParameters

setMaximumLength(OptionalQuantity) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SubdivideFilamentEdges

setMaximumNumIterations(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SubdivideFilamentEdges

setMaximumScale(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.FrangiVesselnessFeatures

setMaxInputSlots(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Sets maximum number of input slots

setMaxIterations(int) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm.ClusteringSettings

setMaxIterations(int) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm.ClusteringSettings

setMaxIterations(int) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm.ClusteringSettings

setMaxLength(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

setMaxLightnessThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

setMaxMemory(int) - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

setMaxNumber(double) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.NumberRangeParameterGenerator

setMaxNumber(Number) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.FloatNumberRangeParameter

setMaxNumber(Number) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.IntNumberRangeParameter

setMaxNumber(Number) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeParameter

setMaxNumCircles(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

setMaxOutputSlots(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Sets maximum number of output slots

setMaxParticleCircularity(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

setMaxParticleSize(double) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

setMaxParticleSize(double) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm

setMaxParticleSize(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

setMaxParticleSphericity(double) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

setMaxParticleSphericity(double) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm

setMaxProgress(int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

setMaxRadius(float) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.binary.Voronoi3DAlgorithm

setMaxRadius(int) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.GaussianFitSpotSegmentation3DAlgorithm

setMaxRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

setMaxRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.FastCircularHoughSegmentation2DAlgorithm

setMaxRadius(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.DilateLabelsAlgorithm

setMaxRedThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

setMaxSaturationThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

setMaxScaleDeformation(BUnwarpJMaxScaleDeformation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

setMaxSeriesIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm

setMaxSigma(float) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature2DSettings

setMaxSigma(float) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature3DSettings

setMaxSlope(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer

setMaxTableColumnSize(int) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

setMaxTheta(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LinesHoughDetection2DAlgorithm

setMaxThreads(int) - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

setMaxThreshold(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm

setMaxThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm

setMaxThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm

setMaxThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm

setMaxThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ThresholdByAnnotation2DAlgorithm

setMaxVolumePixels(int) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

setMaxVolumePixels(int) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm

setMeanColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator

setMeanDiameter(double) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationModelSettings_Old

Deprecated.

setMeanVisible(boolean) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Sets the flag that controls whether or not the mean indicator is drawn for each item, and sends a RendererChangeEvent to all registered listeners.

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.Measurement3DSettings

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DStatisticsAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ColorRoi3DByStatisticsAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ExtractLabelStatisticsAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractROIProfileAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.EnlargeShrinkRoiAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MeasurementDrawerPlugin2D.Settings

setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.Measurement2DSettings

setMeasurement(int, boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Sets the specified system-wide measurement option.

setMeasurements(ROI3DMeasurementSetParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm

setMeasurements(ROI3DRelationMeasurementSetParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm

setMeasurements(ROI3DMeasurementSetParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DStatisticsAlgorithm

setMeasurements(ROI3DMeasurementSetParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm

setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ExtractLabelStatisticsAlgorithm

setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm

setMeasurements(OverlapStatisticsSetParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.OverlapMeasureLabelsAlgorithm

setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm

setMeasurements(ROI2DRelationMeasurementSetParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm

setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm

setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm

setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.EnlargeShrinkRoiAlgorithm

setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm

setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm

setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

setMeasurements(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Sets the system-wide measurement options.

setMedianVisible(boolean) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Sets the flag that controls whether or not the median indicator is drawn for each item, and sends a RendererChangeEvent to all registered listeners.

setMembershipPrefix(String) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm.OutputSettings

setMembranePatchSize(int) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature2DSettings

setMembranePatchSize(int) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature3DSettings

setMembraneSize(int) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature2DSettings

setMembraneSize(int) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature3DSettings

setMenuPath(String) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

setMenuPath(StringList) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

setMenuPath(String) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

Sets the menu path.

setMenuPathList(StringList) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

setMergeAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.ExtractTableAlgorithm

setMergedDataAnnotations(Map<String, JIPipeDataAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

setMergedDataAnnotations(Map<String, JIPipeDataAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

setMergedTextAnnotations(Map<String, JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

setMergedTextAnnotations(Map<String, JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

setMergeInputAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithData

setMergeLabelAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateWithData

setMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByProjectPaths

setMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.OverwriteAnnotations

setMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.AnnotateWithDataTableProperties

setMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.ExtractTableAlgorithm

setMergeToLargerLabel(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm

setMeshColor(Color) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.MaskTo3DMeshAlgorithm

setMeshLengthUnit(Quantity.LengthUnit) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm

setMeshLengthUnit(Quantity.LengthUnit) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

setMeshLengthUnit(Quantity.LengthUnit) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.MaskTo3DMeshAlgorithm

setMeshName(String) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.MaskTo3DMeshAlgorithm

setMeshNamePrefix(String) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm

setMeshNamePrefix(String) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

setMessage(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJLogWrapper

setMetadata(JIPipeStandardMetadata) - Method in class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment

Sets the metadata

setMetadata(JIPipeStandardMetadata) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

Sets metadata

setMetadata(JIPipeStandardMetadata) - Method in class org.hkijena.jipipe.JIPipeMutableDependency

Sets the metadata

setMetadata(CellposeModelData.Metadata) - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData

setMetadata(CellposeSizeModelData.Metadata) - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData

setMetadata(Map<String, String>) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

setMetadata(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesExpressionAlgorithm

setMetadata(StringAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesManuallyAlgorithm

setMetadata(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

setMetadata(StringAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

setMetadata(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.CopyFilamentsAcrossZCTAlgorithm.NewEdgesSettings

setMetadata(Map<String, String>) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentEdge

setMetadata(String, Object) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentEdge

setMetadata(Map<String, String>) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

setMetadata(String, Object) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

setMetadataEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

setMetadataEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

setMetadataFrom(JIPipeGraphEdge) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphEdge

setMetadataGenerators(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm

setMetadataKey(String) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetFilamentMetadataToComponentIndexAlgorithm

setMetadataKey(String) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexMetadataFromImageAlgorithm

setMetadataName(String) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry

setMetadataName(String) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm.MetadataEntry

setMetadataValue(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry

setMetadataValue(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm.MetadataEntry

setMethod(RollingBallBackgroundEstimator2DAlgorithm.Method) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm

setMethod(HistogramContrastEnhancerAlgorithm.Method) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm

setMethod(ZProjectorAlgorithm.Method) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm

setMethod(ZProjectorAlgorithm.Method) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm

setMethod(LabelsToROIAlgorithm.Method) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm

setMethod(SetToContentAwareAlgorithm.Method) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking.SetToContentAwareAlgorithm

setMethod(AutoThresholder.Method) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm

setMethod(LocalAutoThreshold2DAlgorithm.Method) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm

setMethod(InpaintingAlgorithm.Method) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.InpaintingAlgorithm

setMin(float) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.FloatNumberRangeParameter

setMin(int) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.IntNumberRangeParameter

setMinBlueThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

setMinBlueYellowThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

setMinBrightnessThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

setMinContrastExp(int) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

setMinCounter(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm

setMinGreenRedThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

setMinGreenThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

setMinHeight(int) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode

setMinHueThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

setMinimumAngleForSOACLinking(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

setMinimumBackgroundWidth(int) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

setMinimumForeground(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXInitializationParameters

setMinimumNumberOfPixels(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm

setMinimumPanelWidth(int) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

setMinimumScale(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.FrangiVesselnessFeatures

setMinimumSnakeLength(int) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXConvergenceParameters

setMinimumValue(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm

setMinInlierRatio(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationParameters

setMinLength(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

setMinLength(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

setMinLength(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

setMinLevel(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

setMinLightnessThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

setMinNumber(double) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.NumberRangeParameterGenerator

setMinNumber(Number) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.FloatNumberRangeParameter

setMinNumber(Number) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.IntNumberRangeParameter

setMinNumber(Number) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeParameter

setMinNumCircles(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

setMinNumPoints(int) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm

setMinParticleCircularity(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

setMinParticleSize(double) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

setMinParticleSize(double) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm

setMinParticleSize(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

setMinParticleSphericity(double) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

setMinParticleSphericity(double) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm

setMinPixels(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.VolumeOpening2DAlgorithm

setMinPixels(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.VolumeOpening3DAlgorithm

setMinRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

setMinRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.FastCircularHoughSegmentation2DAlgorithm

setMinRedThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

setMinSaturationThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

setMinScaleDeformation(BUnwarpJMinScaleDeformation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

setMinScore(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.FastCircularHoughSegmentation2DAlgorithm

setMinSigma(float) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature2DSettings

setMinSigma(float) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature3DSettings

setMinSize(int) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationThresholdSettings_Old

Deprecated.

setMinSize(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.AdvancedTurboRegParameters

setMinThickness(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm

setMinThreshold(float) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.FindMaxima3DAlgorithm

setMinThreshold(int) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

setMinThreshold(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm

setMinThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm

setMinThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm

setMinThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm

setMinThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ThresholdByAnnotation2DAlgorithm

setMinTrainMasks(int) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

setMinTrainMasks(int) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2TrainingTweaksSettings

setMinTrainMasks(int) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTrainingTweaksSettings

setMinTrainMasks(int) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeTrainingTweaksSettings

setMinVolumePixels(int) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

setMinVolumePixels(int) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm

setMinVoxelNumber(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm

setMinWidth(int) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode

setMissingImageJSites(Set<JIPipeImageJUpdateSiteDependency>) - Method in class org.hkijena.jipipe.JIPipeRegistryIssues

setMissingValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.RestoreVertexValueBackupAlgorithm

setMissingValueReplacement(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm

SetMissingVariableFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.variables

SetMissingVariableFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.variables.SetMissingVariableFunction

setMode(SizeFitMode) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopImageFrameComponent

setMode(JIPipeDesktopHTMLEditor.Mode) - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

setMode(JIPipeDesktopDataTypePicker.Mode) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker

setMode(JIPipeDesktopNodeInfoPicker.Mode) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker

setMode(LaplacianEdgeDetectorAlgorithm.Mode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm

setMode(MorphologicalFeatureContrast2DAlgorithm.Mode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalFeatureContrast2DAlgorithm

setMode(RemoveOutliersFilter2DAlgorithm.Mode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm

setMode(BUnwarpJMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

setMode(TableToRectangularROIAlgorithm.Mode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

setMode(RoiFloodFillAlgorithm.Mode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm

setMode(LineMirror.MirrorOperationMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromExpressionsAlgorithm

setMode(LineMirror.MirrorOperationMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromRoiAlgorithm

setMode(ImageJCalibrationMode) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl

setMode(StringPatternExtraction.Mode) - Method in class org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtraction

setMode(StringOrDouble.Mode) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.StringOrDouble

setModel(PretrainedLegacyCellpose2InferenceModel) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

setModel(PretrainedLegacyCellpose2InferenceModel) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationModelSettings_Old

Deprecated.

setModel(LegacyOmnipose0Model) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

setModelNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.ImportPretrainedCellpose2ModelAlgorithm

setModelNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.ImportPretrainedCellpose3DenoiseModelAlgorithm

setModelNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.ImportPretrainedCellpose3SegmentationModelAlgorithm

setModelNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.ImportPretrainedOmnipose0ModelAlgorithm

setModelNameOrPath(String) - Method in class org.hkijena.jipipe.plugins.cellpose.utils.CellposeModelInfo

setModelPretrained(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.utils.CellposeModelInfo

setModels(PretrainedCellpose2SegmentationModelList) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.ImportPretrainedCellpose2ModelAlgorithm

setModels(PretrainedCellpose3DenoiseModelList) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.ImportPretrainedCellpose3DenoiseModelAlgorithm

setModels(PretrainedCellpose3SegmentationModelList) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.ImportPretrainedCellpose3SegmentationModelAlgorithm

setModels(PretrainedOmnipose0ModelList) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.ImportPretrainedOmnipose0ModelAlgorithm

setModifier(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm

setModifier(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm

setMovieAnimatedDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImage2Algorithm

setMovieAnimatedDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

setMovieAnimatedDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm

setMovieFPS(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImage2Algorithm

setMovieFPS(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

setMovieFPS(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm

setMultiChannelMode(HistogramGenerator.MultiChannelMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.HistogramGenerator

setMultiColorIndex(int) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

setMultiColorMax(int) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

setMultiObjectMaximumBoundingBoxOverlap(double) - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

setMultiObjectScoreThreshold(double) - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

setMultiPartOutputName(String) - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

setMultiple(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathFromUserDataSource

setMultiplier(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.Warp2DAlgorithm

setMultiSelectionEnabled(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

setMustExist(boolean) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectDirectories.DirectoryEntry

setName(String) - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

setName(String) - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters

setName(String) - Method in class org.hkijena.jipipe.api.compat.ImageJImportParameters

setName(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder

setName(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail

setName(String) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataAnnotationInfo

setName(String) - Method in class org.hkijena.jipipe.api.environments.JIPipeEnvironment

setName(String) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo

setName(String) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup

setName(String) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

setName(String) - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

Sets the name

setName(String) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

Sets the name

setName(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

Sets the name

setName(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

Sets the name

setName(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

setName(String) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectDirectories.DirectoryEntry

setName(String) - Method in class org.hkijena.jipipe.api.run.JIPipeProjectRunSet

setName(String) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

setName(String) - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

setName(String) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotSeriesEditor

setName(String) - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderPackage

setName(String) - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderRepository

setName(String) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddParameterDialog.Settings

setName(String) - Method in class org.hkijena.jipipe.desktop.commons.components.parameters.JIPipeDesktopDynamicParameterEditorDialog.ParameterEntry

setName(String) - Method in class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency

setName(String) - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData.Metadata

setName(String) - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData.Metadata

setName(String) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.ParameterFormData

setName(String) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

setName(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm.ROINameToLabelEntry

setName(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator.GeneratedColumn

setName(String) - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage

setName(String) - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderRepository

setName(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROAnnotationReferenceData

setName(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMERODatasetReferenceData

setName(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROImageReferenceData

setName(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROPlateReferenceData

setName(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROProjectReferenceData

setName(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

setName(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

setName(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.filesystem.FileChooserBookmark

setName(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

setName(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRef

setName(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable.ParameterColumn

setName(String) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotDataSeries

setName(String) - Method in class org.hkijena.jipipe.plugins.python.installers.SelectCondaEnvPythonInstaller.Configuration

setName(String) - Method in class org.hkijena.jipipe.plugins.python.installers.SelectSystemPythonInstaller.Configuration

setName(String) - Method in class org.hkijena.jipipe.plugins.python.installers.SelectVirtualEnvPythonInstaller.Configuration

setName(String) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DIndexedMeshGeometry

setName(String) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry

setName(String) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

setName(String) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DUnindexedMeshGeometry

setName(String) - Method in class org.hkijena.jipipe.plugins.scene3d.model.Scene3DGroupNode

setName(String) - Method in interface org.hkijena.jipipe.plugins.scene3d.model.Scene3DNode

Sets the name of this node

setName(String) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

setNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

setNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm

setNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm

setNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROPlateReferenceAlgorithm

setNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm

setNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

setNameColumn(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.ExtractROI3DMetadataAlgorithm

setNameColumn(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.ExtractROIMetadataAlgorithm

setNameFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.DataAnnotationToStringAnnotation

setNameFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveDataAnnotations

setNameGenerator(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.manage.OMEROCreateDatasetAlgorithm

setNamespaceMap(StringAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.AnnotateWithXPathDataAlgorithm

setNamespaceMap(StringAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractTextFromXMLAlgorithm

setNamespaceMap(StringAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm

setNativeLocation(Point) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUIAddSlotButtonActiveArea

setNativeLocation(Point) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

setNativeValue(int) - Method in class org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurementSetParameter

Sets the values from native values

setNativeValue(int) - Method in class org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurementSetParameter

Sets the values from native values

setNativeValue(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementSetParameter

Sets the values from native values

setNativeValue(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.ImageStatisticsSetParameter

Sets the values from native values

setNativeValue(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.RoiRelationMeasurementSet

Sets the values from native values

setNativeWidth(double) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUIAddSlotButtonActiveArea

setNativeWidth(double) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

setnDirections(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm

setNeedsToExist(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FileDataSource

setNeedsToExist(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.FolderDataSource

setNeedsToExist(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathDataSource

setNeighborhood(Neighborhood3D) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi2DToRoi3DConverterAlgorithm

setNeighborhood(Neighborhood3D) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm

setNeighborhood(Neighborhood2D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

setNeighborhood(Neighborhood2D) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.SeparateTouchingLabels2DAlgorithm

setNeighborhoodSize(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LinesHoughDetection2DAlgorithm

setNetAverage(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationEnhancementSettings_Old

Deprecated.

setNetAverage(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationTweaksSettings

setNetAverage(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationTweaksSettings

setNeverAskOnClosingTabs(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

setNewColumnName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.UnMeltTableAlgorithm

setNewEdgeColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

setNewEdgeColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

setNewEdgeColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

setNewEdgeMetadata(StringAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

setNewEdgeMetadata(StringAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

setNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameter

Adds a new instance of the content class Override this method for types that cannot be default-constructed

setNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.colors.OptionalColorMapParameter

setNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.colors.OptionalColorParameter

setNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalBooleanParameter

setNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalByteParameter

setNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalDoubleParameter

setNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalFloatParameter

setNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalIntegerParameter

setNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalLongParameter

setNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalPathParameter

setNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalShortParameter

setNewInstance() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.optional.OptionalStringParameter

setNewInstanceGenerator(Function<JIPipeDataSlotInfo, Object>) - Method in class org.hkijena.jipipe.plugins.parameters.api.graph.SlotMapParameterCollection

setNewLabelColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm

setNewLocationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ReorderHyperstackSlicesExpressionAlgorithm

setNewName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumns2Algorithm.RenamingEntry

setNewPlugin(boolean) - Method in class org.hkijena.jipipe.desktop.app.plugins.pluginsmanager.JIPipeDesktopPluginManagerUI.PluginEntry

setNiter(int) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTweaksSettings

setNmsAlgorithm(HoughLinesNMSAlgorithm) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

setNmsAlgorithm(HoughLinesNMSAlgorithm) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

setNode(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot

Reassigns the node

setNode(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

setNode(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

setNodeAliasIDAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.ExtractParametersAlgorithm

setnodeClass(Class<? extends JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

Sets the algorithm class

setNodeExpandedState(JTree, DefaultMutableTreeNode, boolean) - Static method in class org.hkijena.jipipe.utils.UIUtils

setNodeGridSize(int, int) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopAnnotationGraphNodeUI

setNodeId(String) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm

setNodeInstances(Set<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterKeyPickerUI

setNodeNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.ExtractParametersAlgorithm

setNodes(Set<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.looping.LoopGroup

setNodes(GraphNodeReferenceParameter.List) - Method in class org.hkijena.jipipe.api.run.JIPipeProjectRunSet

setNodeTemplateDownloadRepositories(StringList) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNodeTemplateApplicationSettings

setNodeTemplates(JIPipeNodeTemplate.List) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

setNodeUILocationPerViewModePerCompartment(Map<String, Map<String, Point>>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Sets the location map.

setNodeUILocationWithin(String, Point, String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Sets the UI location of this algorithm within the specified compartment

setNodeUILocationWithin(UUID, Point, String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Sets the UI location of this algorithm within the specified compartment

setNodeUUID(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.graph.GraphNodeReferenceParameter

setNodeUUIDAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.ExtractParametersAlgorithm

setNoInterpolate(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Reslicer

setNoInterpolation(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ResliceAlgorithm

setNoise(float) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.FindMaxima3DAlgorithm

setNoiseType(Cellpose3DenoiseTrainingNoiseType) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseSettings

setNoLUT(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEExporterSettings

setNonSpatialLocation(NonSpatialPoint3d) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

setNormalize(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationEnhancementSettings_Old

Deprecated.

setNormalize(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationTweaksSettings

setNormalize(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTweaksSettings

setNormalize(double) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.SymmetryFilter3DAlgorithm

setNormalize(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve.ConvolveByImage2DAlgorithm

setNormalize(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve.ConvolveByParameter2DAlgorithm

setNormalize(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap2DAlgorithm

setNormalize(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap3DAlgorithm

setNormalize(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.GeodesicDistanceMap2DAlgorithm

setNormalize(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.LabelChamferDistanceMap3DAlgorithm

setNormalize(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.HistogramGenerator

setNormalize(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator

setNormalize(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm

setNormalize(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

setNormalizeContrast(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm

setNormalizePercentile(OptionalVector2iParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTweaksSettings

setNormals(float[]) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DIndexedMeshGeometry

setNormals(float[]) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DUnindexedMeshGeometry

setNormalsIndex(int[]) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DIndexedMeshGeometry

setNotifications(JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

setNotifyInterval(long) - Method in class org.hkijena.jipipe.api.JIPipePercentageProgressInfo

setNotifyInvalidDragAndDrop(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setNoWindows(boolean) - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters

setNoWindows(OptionalBooleanParameter) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

setNuclearChannel(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

setNuclearChannel(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2ChannelSettings

setNumberOfBackgroundRadialSectors(int) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

setNumBins(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm

setNumBins(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm

setNumBins(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

setNumDataAnnotationColumns(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.AnnotateWithDataTableProperties

setNumEpochs(int) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

setNumEpochs(int) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

setNumEpochs(int) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

setNumEpochs(int) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

setNumEpochs(int) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

setNumEpochs(int) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

setNumEpochs(int) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

setNumIncompleteOptional(int) - Method in class org.hkijena.jipipe.plugins.batchassistant.DataBatchStatusData

setNumIncompleteRequired(int) - Method in class org.hkijena.jipipe.plugins.batchassistant.DataBatchStatusData

setNumIterationSteps(int) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMutableIterationContext

setNumMerging(int) - Method in class org.hkijena.jipipe.plugins.batchassistant.DataBatchStatusData

setNumPeaks(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

setNumPeaks(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

setNumRows(int) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon

Sets the number of rows Will not rebuild the ribbon!

setNumRowsAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.AnnotateWithDataTableProperties

setNumScales(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.FrangiVesselnessFeatures

setNumTestImagesPerEpoch(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

setNumTestImagesPerEpoch(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTrainingTweaksSettings

setNumTextAnnotationColumns(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.AnnotateWithDataTableProperties

setNumThreads(int) - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration

setNumThreads(int) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

setNumThreads(int) - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

setNumThreads(int) - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRunSettings

setNumThreads(int) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersAlgorithm

setNumThreads(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaClassification2DAlgorithm

setNumThreads(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaClassification3DAlgorithm

setNumTilesX(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

setNumTilesX(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

setNumTilesY(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

setNumTilesY(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

setNumTrainingImagesPerEpoch(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

setNumTrainingImagesPerEpoch(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTrainingTweaksSettings

setNumTrials(int) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm

setObject3D(Object3D) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

setOctaveSizeLimits(Vector2iParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SIFTParameters

setOffset(LongList) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.PairOfPointsImageJ2ShapeData

setOldLabelColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm

setOmeXMLDataAnnotation(OptionalDataAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm

setOmnipose0Environment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.omnipose.OmniposePluginProjectSettings

setOneBasedPositions(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

setOneBasedPositions(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

setOneBasedPositions(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

setOneBasedPositions(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

setOneBasedPositions(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

setOnlyActiveImage(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ImagePlusFromGUI

setOnlyFirst(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm

setOnlyIfPossible(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnToNumericAlgorithm

setOnlyPinned(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

setOnlySameComponent(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.RemoveDuplicateVerticesAlgorithm

setOpacity(double) - Method in class org.hkijena.jipipe.plugins.ij3d.utils.Roi3DDrawer

setOpacity(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

setOpacity(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel

Deprecated.

setOpacity(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

setOpacity(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

setOpacity(double) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageBlendLayer

setOpacity(double) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

setOpacityStep(double) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopAnimatedIcon

setOpaque(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

setOpenAllSeries(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

setOpenDataWindowsAlwaysOnTop(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

setOpenTabs(List<String>) - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopJIPipeProjectTabMetadata

setOpenUtilityWindowsAlwaysOnTop(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

setOperation(LogicalOperation) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ROI3DCalculatorAlgorithm

setOperation(DirectionalFilter.Operation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm

setOperation(ImageComparer2DAlgorithm.Operation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm

Deprecated.

setOperation(LegacyImageCalculator2DAlgorithm.Operation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DAlgorithm

Deprecated.

setOperation(LegacyImageCalculator2DAlgorithm.Operation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DMergingAlgorithm

Deprecated.

setOperation(GrayscaleAttributeFiltering2DAlgorithm.Operation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm

setOperation(GrayscaleAttributeFiltering3DAlgorithm.Operation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm

setOperation(Morphology.Operation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm

setOperation(Morphology.Operation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm

setOperation(MorphologyBinary2DAlgorithm.Operation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm

setOperation(LogicalOperation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiCalculatorAlgorithm

setOption(String, boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

setOptional(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

setOrcid(String) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

setOrder(int) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

setOrder(int) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExtractParent

setOrderExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm

Deprecated.

setOrderExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2

setOrderMetadataKey(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FindLinearFilamentVertexOrderAlgorithm

setOriginalBitDepth(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo

setOriginalHeight(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo

setOriginalHeightAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

setOriginalProjectPath(String) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItem

setOriginalSizeCAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

setOriginalSizeTAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

setOriginalSizeZAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

setOriginalWidth(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo

setOriginalWidthAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

setOutline(ROI3DOutline) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process.OutlineRoi3DAlgorithm

setOutline(RoiOutline) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.RemoveBorderRoisAlgorithm

setOutline(RoiOutline) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.OutlineRoiAlgorithm

setOutput(O) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter

setOutput32bit(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm

setOutputAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.forms.utils.SingleAnnotationIOSettings

setOutputBackgroundColumn(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator

setOutputBackgroundColumn(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator

setOutputBackgroundColumn(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator

setOutputBlockwiseObjectPredictions(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters

setOutputBlockwiseObjectPredictions(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters

setOutputBlockwiseObjectPredictions(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters

setOutputBlockwiseObjectProbabilities(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters

setOutputBlockwiseObjectProbabilities(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters

setOutputBlockwiseObjectProbabilities(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters

setOutputBranchTable(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters

setOutputCategoryColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.MeltTableAlgorithm

setOutputCoherency(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm.OutputParameters

setOutputCoherency(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm.OutputParameters

setOutputCoherency(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm.OutputParameters

setOutputColumnBinCount(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

setOutputColumnBinMax(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

setOutputColumnBinMin(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

setOutputColumnClusterId(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm.OutputSettings

setOutputColumnClusterId(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm.OutputSettings

setOutputColumnClusterId(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm.OutputSettings

setOutputColumnClusterSize(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.DBSCANClusteringAlgorithm.OutputSettings

setOutputColumnClusterSize(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm.OutputSettings

setOutputColumnClusterSize(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm.OutputSettings

setOutputColumnDistanceToCenter(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.FuzzyKMeansClusteringAlgorithm.OutputSettings

setOutputColumnDistanceToCenter(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.KMeansClusteringAlgorithm.OutputSettings

setOutputColumnName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ApplyExpressionToTableByColumnAlgorithm.ProcessingItem

setOutputColumnName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm.OutputColumn

setOutputColumnName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm.AdditionalColumn

Deprecated.

setOutputColumns(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm

setOutputColumnValues(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ApplyExpressionToTableByColumnAlgorithm.ProcessingItem

setOutputColumnValues(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm.OutputColumn

setOutputColumnValues(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm.AdditionalColumn

Deprecated.

setOutputDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

setOutputDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.CreateStackAlgorithm

setOutputDirectory(Path) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter

setOutputDirectory(Path) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataTableByParameter

setOutputDirectory(Path) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.ExportROI3DAlgorithm

Deprecated.

setOutputDirectory(Path) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

setOutputDirectory(Path) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm

Deprecated.

setOutputDirectory(Path) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm

Deprecated.

setOutputDirectory(Path) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm

Deprecated.

setOutputDirectory(Path) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsExporterAlgorithm

Deprecated.

setOutputDirectory(Path) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm

Deprecated.

setOutputEmptyLists(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm

setOutputEmptyLists(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm

setOutputEmptyLists(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm

setOutputEmptyLists(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm

setOutputEmptyLists(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm

setOutputEnergy(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm.OutputParameters

setOutputEnergy(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm.OutputParameters

setOutputEnergy(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm.OutputParameters

setOutputFeatures(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters

setOutputFeatures(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters

setOutputFeatures(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters

setOutputFeatures(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters

setOutputFeaturesStage1(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

setOutputFeaturesStage2(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

setOutputFile(String) - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderPackage

setOutputFiles(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.FilterPaths

setOutputFlows(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationOutputSettings_Old

Deprecated.

setOutputFlowsD(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationOutputSettings

setOutputFlowsXY(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationOutputSettings

setOutputFlowsZ(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationOutputSettings

setOutputFolders(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.FilterPaths

setOutputForegroundColumn(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator

setOutputForegroundColumn(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator

setOutputForegroundColumn(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator

setOutputFormat(ExportImagePlusAsOMEZARRAlgorithm.OutputFormat) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm

setOutputGradientX(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm.OutputParameters

setOutputGradientY(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm.OutputParameters

setOutputHarrisIndex(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm.OutputParameters

setOutputImageType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.MatrixToImageAlgorithm

setOutputImageType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableToImageAlgorithm

setOutputInputStage1(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

setOutputInputStage2(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

setOutputKeyColumn(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator

setOutputKeyColumn(String) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm

setOutputLabels(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationOutputSettings_Old

Deprecated.

setOutputLabels(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationOutputSettings

setOutputLabels(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters

setOutputLabelsStage1(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

setOutputLabelsStage2(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

setOutputLargestShortestPaths(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters

setOutputMatchedTemplates(boolean) - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

setOutputNodes(BiMap<String, JIPipeProjectCompartmentOutput>) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

setOutputNonExisting(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.FilterPaths

setOutputObjectPredictions(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters

setOutputObjectPredictions(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters

setOutputObjectPredictions(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters

setOutputObjectProbabilities(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters

setOutputObjectProbabilities(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters

setOutputObjectProbabilities(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters

setOutputOrientation(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm.OutputParameters

setOutputOrientation(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm.OutputParameters

setOutputOrientation(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm.OutputParameters

setOutputOutputFolder(boolean) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessIteratingAlgorithm

setOutputOutputFolder(boolean) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessMergingAlgorithm

setOutputOverlaps(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

setOutputOverlaps(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings

setOutputOverlaps(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

setOutputPath(Path) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

Sets the output path

setOutputPath(Path) - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRunSettings

setOutputPixelProbabilities(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters

setOutputPixelProbabilities(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters

setOutputPixelProbabilities(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters

setOutputPolarCoordinates(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm

setOutputPolarCoordinates(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm

setOutputPolarCoordinates(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm

setOutputProbabilities(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationOutputSettings_Old

Deprecated.

setOutputProbabilities(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationOutputSettings

setOutputProbabilities(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters

setOutputProbabilitiesAllStages(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

setOutputProbabilitiesStage1(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

setOutputProbabilitiesStage2(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

setOutputProbabilityMaps(boolean) - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaClassification2DAlgorithm

setOutputProbabilityMaps(boolean) - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.WekaClassification3DAlgorithm

setOutputROI(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationOutputSettings_Old

Deprecated.

setOutputROI(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationOutputSettings

setOutputRoi(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm

setOutputSealed(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Seals/Unseals output slots

setOutputSettings(JIPipeRuntimePartition.OutputSettings) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

setOutputSimpleSegmentation(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters

setOutputSimpleSegmentationStage1(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

setOutputSimpleSegmentationStage2(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

setOutputSkeletonLabels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters

setOutputSkeletonTable(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters

setOutputSlotName(String) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartmentOutput

setOutputSlots(List<AddJIPipeOutputSlot>) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

Sets the output slots

setOutputStyles(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationOutputSettings_Old

Deprecated.

setOutputTable(JIPipeDataTable) - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation.ImportDataRun

setOutputTaggedSkeletons(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters

setOutputThresholdColumn(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator

setOutputThresholdColumn(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator

setOutputThresholdColumn(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator

setOutputType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling2DAlgorithm

setOutputType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling3DAlgorithm

setOutputType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.ColorToGreyscaleExpression2D

setOutputType(LocalMaxima2DAlgorithm.OutputType) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm

setOutputType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyColorMathExpression2DExpression

setOutputType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap2DAlgorithm

setOutputType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap3DAlgorithm

setOutputType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.GeodesicDistanceMap2DAlgorithm

setOutputType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.LabelChamferDistanceMap3DAlgorithm

setOutputType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.converters.ImageTypeConverter

setOutputUncertainty(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters

setOutputUncertaintyStage1(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

setOutputUncertaintyStage2(boolean) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters

setOutputValueColumn(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator

setOutputValueColumn(String) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm

setOutputValueColumnName(String) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.MeltTableAlgorithm

setOutputVectorSize(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm

setOutputWarnings(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

setOutsideColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

setOverlapFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

setOverlapFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

setOverlapFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings

setOverlapFilter(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings

setOverlapFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

setOverlapFilterMeasurements(ROI3DRelationMeasurementSetParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm

setOverlapFilterMeasurements(ROI3DRelationMeasurementSetParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

setOverlapFilterMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm

setOverlapFilterMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm

setOverlapFilterMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

setOverlapResolution(OverlapOption) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

setOverlapThreshold(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

setOverlapX(int) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling2DSettings

setOverlapX(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

setOverlapX(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

setOverlapY(int) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling2DSettings

setOverlapY(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

setOverlapY(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

SetOverlay3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.overlay

SetOverlay3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.overlay.SetOverlay3DAlgorithm

SetOverlay3DAlgorithm(SetOverlay3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.overlay.SetOverlay3DAlgorithm

SetOverlayAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay

SetOverlayAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.SetOverlayAlgorithm

SetOverlayAlgorithm(SetOverlayAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.SetOverlayAlgorithm

SetOverlayFilamentsAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.overlay

SetOverlayFilamentsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.overlay.SetOverlayFilamentsAlgorithm

SetOverlayFilamentsAlgorithm(SetOverlayFilamentsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.overlay.SetOverlayFilamentsAlgorithm

setOverlays(List<JIPipeData>) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

Sets overlay data

setOverriddenParameters(StringQueryExpressionAndStringPairParameter.List) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

setOverrideArguments(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessIteratingAlgorithm

setOverrideArguments(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessMergingAlgorithm

setOverrideAxes(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.ExportIlastikHDF5ImageAlgorithm

setOverrideAxes(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.ImportIlastikHDF5ImageAlgorithm

setOverrideCharAllowList(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijocr.nodes.TesseractOCRAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROPlateReferenceAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMERODatasetReferenceDataSource

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROImageReferenceDataSource

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROPlateReferenceDataSource

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROProjectReferenceDataSource

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROScreenReferenceDataSource

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROWellReferenceDataSource

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROImageAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROTableAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.manage.OMEROCreateDatasetAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListDatasetImagesAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListDatasetsAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListGroupsAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListPlatesAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListProjectsAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListScreensAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListWellImagesAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.navigate.OMEROListWellsAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROImageToDatasetAlgorithm

setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROTableAlgorithm

setOverrideDPI(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijocr.nodes.TesseractOCRAlgorithm

setOverrideEdgeColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

setOverrideEdgeColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

setOverrideEdgeRadius(OptionalFloatParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

setOverrideEdgeThickness(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1InferenceAlgorithm

Deprecated.

setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

setOverrideEnvironment(OptionalTSOAXEnvironment) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

setOverrideEnvironment(OptionalIlastikEnvironment) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

setOverrideEnvironment(OptionalIlastikEnvironment) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

setOverrideEnvironment(OptionalIlastikEnvironment) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

setOverrideEnvironment(OptionalIlastikEnvironment) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

setOverrideEnvironment(OptionalIlastikEnvironment) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.IteratingPythonScriptAlgorithm

setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.MergingPythonScriptAlgorithm

setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.PythonScriptAlgorithm

setOverrideEnvironment(OptionalPathParameter) - Method in class org.hkijena.jipipe.plugins.python.installers.SelectCondaEnvPythonInstaller.Configuration

setOverrideEnvironment(OptionalREnvironment) - Method in class org.hkijena.jipipe.plugins.r.algorithms.ImportRDatasetAlgorithm

setOverrideEnvironment(OptionalREnvironment) - Method in class org.hkijena.jipipe.plugins.r.algorithms.IteratingRScriptAlgorithm

setOverrideEnvironment(OptionalREnvironment) - Method in class org.hkijena.jipipe.plugins.r.algorithms.MergingRScriptAlgorithm

setOverrideFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.utils.Roi3DDrawer

setOverrideFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

setOverrideFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

setOverrideFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

setOverrideFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

setOverrideInstallationPath(OptionalPathParameter) - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

setOverrideLineColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

setOverrideLineColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

setOverrideLineColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

setOverrideLineColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

setOverrideLineWidth(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

setOverrideLineWidth(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

setOverrideLineWidth(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

setOverrideLineWidth(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiDrawer

setOverrideMeshColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm

setOverrideRadius(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SubdivideFilamentEdges

setOverrideTempDirectory(OptionalPathParameter) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDataStorageProjectSettings

setOverrideTesseractOCREnvironment(OptionalTesseractOCREnvironment) - Method in class org.hkijena.jipipe.plugins.ijocr.nodes.TesseractOCRAlgorithm

setOverrideValue(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SubdivideFilamentEdges

setOverrideVertexColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

setOverrideVertexColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

setOverrideVertexRadius(OptionalFloatParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

setOverrideVertexRadius(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentsDrawer

setOverwriteHeight(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

setOverwriteHeight(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingZeroImage

setOverwriteOutputBitDepth(OptionalBitDepth) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

setOverwriteOutputBitDepth(OptionalBitDepth) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingZeroImage

setOverwriteSizeC(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawMaskAlgorithm

setOverwriteSizeC(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawROIAlgorithm

setOverwriteSizeC(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

setOverwriteSizeC(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingZeroImage

setOverwriteSizeT(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawMaskAlgorithm

setOverwriteSizeT(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawROIAlgorithm

setOverwriteSizeT(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

setOverwriteSizeT(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingZeroImage

setOverwriteSizeZ(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawMaskAlgorithm

setOverwriteSizeZ(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawROIAlgorithm

setOverwriteSizeZ(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

setOverwriteSizeZ(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingZeroImage

setOverwriteWidth(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

setOverwriteWidth(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingZeroImage

setP(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm

setPadded(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEExporterSettings

setPageSegmentationMethod(TesseractPageSegmentationMethod) - Method in class org.hkijena.jipipe.plugins.ijocr.nodes.TesseractOCRAlgorithm

setParameter(String, Object) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

Sets a parameter and triggers the associated events

setParameter(Object, boolean) - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI

Sets the parameter value.

setParameter(P) - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter

setParameter(JIPipeParameterCollection, String, Object) - Static method in class org.hkijena.jipipe.utils.ParameterUtils

Sets a parameter of a JIPipeParameterCollection and triggers the associated events

setParameterAccess(JIPipeParameterAccess) - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI.InitializationParameters

setParameterAnnotationsPrefix(String) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings

setParameterAnnotationsPrefix(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

setParameterAnnotationsUseInternalNames(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings

setParameterAnnotationsUseInternalNames(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings

setParameterData(Map<String, Object>) - Method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersData

setParameterKeyFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.ExtractParametersAlgorithm

setParameterReferenceGroups(List<GraphNodeParameterReferenceGroup>) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection

setParameters(ImageJExportParameters) - Method in class org.hkijena.jipipe.api.compat.ImageJDataExportOperation

Sets arbitrary string data that can be used by the adapter for the conversion

setParameters(BiMap<String, JIPipeParameterAccess>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

setParameters(JIPipeDynamicParameterCollection) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OMEAccessorParameter

setParameters(int, int, int, int, int, double, int, double, int, int, boolean, boolean, boolean, boolean, boolean, boolean, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Hough_Circle

Import values from GUI class before starting the analysis thread

setParametersData(ParametersData) - Method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersDataViewerPanel

setParameterTable(ParameterTable) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersTableAlgorithm

setParameterTree(JIPipeParameterTree) - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI.InitializationParameters

setParent(JIPipeNodeGroup) - Method in class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents

setParent(JIPipeParameterTree) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Sets the parent of this tree.

setParent(Object) - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI.InitializationParameters

setParent(Component) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopAnimatedIcon

setParent(Component) - Method in class org.hkijena.jipipe.desktop.commons.components.icons.SpinnerIcon

setParent(View) - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Establishes the parent view for this view.

setParent(AnalyzeSkeleton2D3DAlgorithm) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters

setParent(JIPipeGraphNode) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.GeneratedParameters

setParentGraph(JIPipeGraph) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Sets the graph this algorithm is location in.

setParentPath(Path) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.RelativizeByParameter

Sets the subfolder

setParentPathAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotateWithPathProperties

setPassThrough(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

setPassword(PasswordParameter) - Method in class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment

setPassword(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.auth.PasswordParameter

setPath(String) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference

setPath(Path) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectDirectories.DirectoryEntry

setPath(Path) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPathEditorComponent

setPath(Path) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathDataSource

Sets the file name

setPath(String) - Method in class org.hkijena.jipipe.plugins.filesystem.dataypes.PathData

setPath(Path) - Method in class org.hkijena.jipipe.plugins.filesystem.dataypes.PathData

setPath(Path) - Method in class org.hkijena.jipipe.plugins.parameters.library.filesystem.FileChooserBookmark

setPathIOMode(PathIOMode) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathFromUserDataSource

setPathMode(PathType) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPathEditorComponent

setPathName(String) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.RenameByString

Sets the subfolder

setPaths(PathList) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathListDataSource

Sets the folder path

setPathType(PathType) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.PathFromUserDataSource

setPathType(PathType) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

setPeakThreshold(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

setPeakThreshold(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

setPenalty(double) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeaturePenaltyParameter

setPercent(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.AddSaltAndPepperNoise2DAlgorithm

setPercentile(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.PercentileThreshold8U2DAlgorithm

setPermissions(JIPipeProjectPermissions) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

setPerProjectTempDirectory(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

setPersistence(JIPipeParameterSerializationMode) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

setPersistence(JIPipeParameterSerializationMode) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

setPersistence(JIPipeParameterSerializationMode) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

setPerSlotStatus(ResultsTableData) - Method in class org.hkijena.jipipe.plugins.batchassistant.DataBatchStatusData

SetPhysicalDimensionsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration

SetPhysicalDimensionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm

SetPhysicalDimensionsAlgorithm(SetPhysicalDimensionsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm

SetPhysicalDimensionsByAnnotationsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration

SetPhysicalDimensionsByAnnotationsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm

SetPhysicalDimensionsByAnnotationsAlgorithm(SetPhysicalDimensionsByAnnotationsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm

SetPhysicalDimensionsByExpressionsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration

SetPhysicalDimensionsByExpressionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm

SetPhysicalDimensionsByExpressionsAlgorithm(SetPhysicalDimensionsByExpressionsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm

setPhysicalDimensionT(OptionalQuantity) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm

setPhysicalDimensionT(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm

setPhysicalDimensionT(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm

setPhysicalDimensionTAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

setPhysicalDimensionTAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

setPhysicalDimensionValue(OptionalQuantity) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm

setPhysicalDimensionValue(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm

setPhysicalDimensionValue(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm

setPhysicalDimensionValueAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

setPhysicalDimensionValueAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

setPhysicalDimensionX(OptionalQuantity) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm

setPhysicalDimensionX(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm

setPhysicalDimensionX(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm

setPhysicalDimensionXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

setPhysicalDimensionXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

setPhysicalDimensionY(OptionalQuantity) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm

setPhysicalDimensionY(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm

setPhysicalDimensionY(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm

setPhysicalDimensionYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

setPhysicalDimensionYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

setPhysicalDimensionZ(OptionalQuantity) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm

setPhysicalDimensionZ(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm

setPhysicalDimensionZ(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm

setPhysicalDimensionZAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

setPhysicalDimensionZAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

setPhysicalSizes(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm

setPhysicalSizes(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

setPhysicalSizes(boolean) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.MaskTo3DMeshAlgorithm

setPhysicalSizeX(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

setPhysicalSizeX(OptionalQuantity) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

setPhysicalSizeY(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

setPhysicalSizeY(OptionalQuantity) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

setPhysicalSizeZ(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

setPhysicalSizeZ(OptionalQuantity) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

setPhysicalVoxelSizeX(Quantity) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

setPhysicalVoxelSizeY(Quantity) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

setPhysicalVoxelSizeZ(Quantity) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

setPinned(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

setPinnedNodes(StringList) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.NodeSearchSettings

setPipelineEditorDockLayout(String) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.DockLayoutSettings

setPipelineEditorDockLayoutTemplates(StringAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.DockLayoutSettings

setPixels(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.EnlargeShrinkRoiAlgorithm

setPixelThreshold(OptionalFloatParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LinesHoughDetection2DAlgorithm

setPlaceholderAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.UsePlaceholderForMissingDataAlgorithm

setPlaceholderTable(ResultsTableData) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm

Deprecated.

setPlaceholderTable(ResultsTableData) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm2

setPlaneNumberAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

setPlaneNumberAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

setPlaneStartLocation(Anchor) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ResliceAlgorithm

setPlateId(long) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROPlateReferenceData

setPlateIds(LongList) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROPlateReferenceDataSource

setPlotNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

setPlotType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JFreeChartPlotEditor

setPlotType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTablesAlgorithm

Deprecated.

setPluginInfo(PluginInfo<JIPipeJavaPlugin>) - Method in class org.hkijena.jipipe.JIPipeJavaExtensionInitializationInfo

setPoint(Point) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneGhostGlassPane

setPoints(double[][]) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegPointHandler

Set new position for all landmarks, without clipping.

setPolarCoordinates(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.Warp2DAlgorithm

setPort(int) - Method in class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment

setPosition(float) - Method in class org.hkijena.jipipe.utils.ColorUtils.GradientStop

setPositionC(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualLocationROIProperties

setPositionC(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

setPositionC(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

setPositionC(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

setPositionC(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

setPositionC(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

setPositionT(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualLocationROIProperties

setPositionT(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

setPositionT(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

setPositionT(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

setPositionT(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

setPositionT(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

setPositionX(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

setPositionX(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

setPositionX(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

setPositionX(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

setPositionX(double) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

setPositionY(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

setPositionY(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

setPositionY(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

setPositionY(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

setPositionY(double) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

setPositionZ(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualLocationROIProperties

setPositionZ(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

setPositionZ(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

setPositionZ(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

setPositionZ(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

setPositionZ(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

setPowerSpectrumMean(double) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo

setPreActivationIssues(Map<String, JIPipeValidationReport>) - Method in class org.hkijena.jipipe.JIPipeRegistryIssues

setPreciseColocalization(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

setPreciseColocalization(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm

setPreciseColocalization(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

setPreciseColocalization(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm

setPrecision(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Sets the number of digits displayed to the right of decimal point.

setPredecessors(Set<String>) - Method in class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext

setPredictionMapsDataAnnotation(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

setPreferAssociatedImage(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm

setPreferAssociatedImage(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

setPreferCustomDownloader(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeDownloadsApplicationSettings

setPreferIsotropicFilter(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersAlgorithm

setPreferRenderViaOverlay(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm

setPreferRenderViaOverlay(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm

setPrefix(String) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.TemporaryFileDataSource

setPreprocessingScript(PythonScript) - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelIterating

setPreprocessingScript(PythonScript) - Method in class org.hkijena.jipipe.plugins.clij2.algorithms.Clij2ExecuteKernelSimpleIterating

setPreprocessor(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.AnnotateWithTextDataAlgorithm.Entry

setPreprocessor(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.TextDataToTableAlgorithm.Entry

setPresets(JIPipeDataDirectoryEnvironment.List) - Method in class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironmentApplicationSettings

setPresets(TSOAXEnvironment.List) - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.TSOAXApplicationSettings

setPresets(TesseractOCREnvironment.List) - Method in class org.hkijena.jipipe.plugins.ijocr.settings.TesseractOCRApplicationSettings

setPresets(IlastikEnvironment.List) - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

setPresets(OMEROCredentialsEnvironment.List) - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginApplicationSettings

setPresets(ProcessEnvironment.List) - Method in class org.hkijena.jipipe.plugins.processes.JIPipeProcessesPluginApplicationSettings

setPresets(JIPipePythonAdapterLibraryEnvironment.List) - Method in class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonPluginAdapterApplicationSettings

setPresets(PythonEnvironment.List) - Method in class org.hkijena.jipipe.plugins.python.PythonPluginApplicationSettings

setPresets(REnvironment.List) - Method in class org.hkijena.jipipe.plugins.r.RPluginApplicationSettings

setPresetsListInterface(List<JIPipeEnvironment>, Class<?>) - Method in interface org.hkijena.jipipe.api.environments.JIPipeExternalEnvironmentSettings

Sets the presets This is an interface class for easy access

setPresetsListInterface(List<JIPipeEnvironment>, Class<?>) - Method in class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironmentApplicationSettings

setPresetsListInterface(List<JIPipeEnvironment>, Class<?>) - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.TSOAXApplicationSettings

setPresetsListInterface(List<JIPipeEnvironment>, Class<?>) - Method in class org.hkijena.jipipe.plugins.ijocr.settings.TesseractOCRApplicationSettings

setPresetsListInterface(List<JIPipeEnvironment>, Class<?>) - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginApplicationSettings

setPresetsListInterface(List<JIPipeEnvironment>, Class<?>) - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginApplicationSettings

setPresetsListInterface(List<JIPipeEnvironment>, Class<?>) - Method in class org.hkijena.jipipe.plugins.processes.JIPipeProcessesPluginApplicationSettings

setPresetsListInterface(List<JIPipeEnvironment>, Class<?>) - Method in class org.hkijena.jipipe.plugins.python.adapter.JIPipePythonPluginAdapterApplicationSettings

setPresetsListInterface(List<JIPipeEnvironment>, Class<?>) - Method in class org.hkijena.jipipe.plugins.python.PythonPluginApplicationSettings

setPresetsListInterface(List<JIPipeEnvironment>, Class<?>) - Method in class org.hkijena.jipipe.plugins.r.RPluginApplicationSettings

setPreSmoothing(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm

setPretrained(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData.Metadata

setPretrained(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData.Metadata

setPretrainedModel(PretrainedLegacyCellpose2TrainingModel) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

setPretrainedModel(PretrainedLegacyCellpose2TrainingModel) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

setPretrainedModel(LegacyOmnipose0PretrainedModel) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

setPreventAddingDeletingNodes(boolean) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectPermissions

setPreventModifyingSlots(boolean) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectPermissions

setPreventUpdateSlots(boolean) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

setPreviewHeight(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc.DataToPreviewAlgorithm

setPreviewSize(int) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralDataApplicationSettings

setPreviewWidth(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc.DataToPreviewAlgorithm

setPriority(double) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

Sets the priority

setPriority(double) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

setPriority(double) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

setPriority(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageBlendLayer

setProcessEnvironment(ProcessEnvironment) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessIteratingAlgorithm

setProcessEnvironment(ProcessEnvironment) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.processes.RunProcessMergingAlgorithm

setProcessing3D(boolean) - Method in class org.hkijena.jipipe.plugins.ijweka.datatypes.WekaModelData.Metadata

setProcessing3D(boolean) - Method in class org.hkijena.jipipe.plugins.ijweka.nodes.ImportWekaModelFromFileAlgorithm

setProcessorParameters(ExpressionTableColumnProcessorParameterList) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ApplyExpressionToColumnsAlgorithm

Deprecated.

setProcessorParameters(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ApplyExpressionToTableByColumnAlgorithm

setProcessorParameters(ConvertingTableColumnProcessorParameterList) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ConvertColumnsAlgorithm

setProcessorParameters(IntegratingTableColumnProcessorParameterList) - Method in class org.hkijena.jipipe.plugins.tables.nodes.IntegrateColumnsAlgorithm

setProgress(int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

setProgress(int, int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

Sets the progress and max progress

setProgress(double) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.JIPipeLogger

setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.AbstractJIPipeRunnable

setProgressInfo(JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.run.JIPipeRunnable

Sets the progress info of this runnable

setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstaller

setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToFilesByMetadataExporterRun

setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToOutputExporterRun

setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToZIPExporterRun

setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun

setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.python.installers.SelectCondaEnvPythonInstaller

setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.python.installers.SelectSystemPythonInstaller

setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.python.installers.SelectVirtualEnvPythonInstaller

setProject(JIPipeProject) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectInfoParameters

setProjectAllHyperstackTimePoints(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm

setProjectAuthors(OptionalJIPipeAuthorMetadata.List) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectAuthorsApplicationSettings

setProjectDefaultEnvironment(OptionalTesseractOCREnvironment) - Method in class org.hkijena.jipipe.plugins.ijocr.settings.OCRPluginProjectSettings

setProjectDefaultEnvironment(OptionalIlastikEnvironment) - Method in class org.hkijena.jipipe.plugins.ilastik.settings.IlastikPluginProjectSettings

setProjectDefaultEnvironment(OptionalJIPipeDataDirectoryEnvironment) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageSamplesProjectSettings

setProjectDefaultEnvironment(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.plugins.omero.OMEROPluginProjectSettings

setProjectDefaultEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.plugins.python.PythonPluginProjectSettings

setProjectDefaultEnvironment(OptionalREnvironment) - Method in class org.hkijena.jipipe.plugins.r.RPluginProjectSettings

setProjectDefaultTSOAXEnvironment(OptionalTSOAXEnvironment) - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.FilamentsPluginProjectSettings

setProjectDirectory(Path) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

setProjectDirectory(Path) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Sets the project directory.

setProjectedAxis(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm

setProjectFile(Path) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.RunJIPipeProjectAlgorithm

setProjectId(long) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROProjectReferenceData

setProjectIds(LongList) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROProjectReferenceDataSource

setProjectModified(boolean) - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

setProjectModified(boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopDummyWorkbench

setProjectModified(boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

setProjectModified(boolean) - Method in interface org.hkijena.jipipe.desktop.app.JIPipeDesktopWorkbench

Marks/unmarks the project of this workbench as modified

setProjectOverviewColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

setProjectOverviewColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartmentOutput

setProjectPath(Path) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItem

setProjectPythonAdapterLibraryEnvironment(OptionalJIPipePythonAdapterLibraryEnvironment) - Method in class org.hkijena.jipipe.plugins.python.PythonPluginProjectSettings

setProjectSessionId(String) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupSessionInfo

setProjectStoragePath(String) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupSessionInfo

setProjectTemplate(JIPipeProjectDefaultsApplicationSettings.ProjectTemplateEnum) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectDefaultsApplicationSettings

setProjectTemplateDownloadRepositories(StringList) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectDefaultsApplicationSettings

setProjectValidationMode(IlastikProjectValidationMode) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikAutoContextAlgorithm

setProjectValidationMode(IlastikProjectValidationMode) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikObjectClassificationAlgorithm

setProjectValidationMode(IlastikProjectValidationMode) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPixelClassificationAlgorithm

setProjectValidationMode(IlastikProjectValidationMode) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm

setProjectValidationMode(IlastikProjectValidationMode) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

setPropertiesFromAttributes() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Update any cached values that come from attributes.

setProtocolDescription(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

setProtocolDescriptionAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

setProtocolIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

setProtocolIdentifier(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

setProvidedByEnvironment(boolean) - Method in class org.hkijena.jipipe.plugins.python.PythonPackageLibraryEnvironment

setPruneCyclesMethod(AnalyzeSkeleton2D3DAlgorithm.CycleRemovalMethod) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.SkeletonToSimplifiedFilamentsFijiAlgorithm

setPruneCyclesMethod(AnalyzeSkeleton2D3DAlgorithm.CycleRemovalMethod) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm

setPruneEndsMethod(AnalyzeSkeleton2D3DAlgorithm.EndRemovalMethod) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.SkeletonToSimplifiedFilamentsFijiAlgorithm

setPruneEndsMethod(AnalyzeSkeleton2D3DAlgorithm.EndRemovalMethod) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm

setPsf(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

setPsi(double) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaborKernelGenerator

setPyramidDepth(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegImage

Sets the depth up to which the pyramids should be computed.

setPyramidDepth(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegMask

Set the depth up to which the pyramids should be computed.

setPythonExecutable(Path) - Method in class org.hkijena.jipipe.plugins.python.installers.SelectSystemPythonInstaller.Configuration

setQ(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm

setQuadrantSwapNeeded(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo

setQuery(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeArtifactQueryParameter

setR(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm

setR(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm

setRadialFar(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

setRadialNear(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

setRadians(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm

setRadians(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CornerHarris2DAlgorithm

setRadians(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.OrientationFeatures2DAlgorithm

setRadius(int) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.binary.Watershed3DSplittingAlgorithm

setRadius(int) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.SymmetryFilter3DAlgorithm

setRadius(float) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SeedSegmentationSettings

setRadius(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

setRadius(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

setRadius(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

setRadius(long) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.DiamondImageJ2ShapeData

setRadius(long) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.DiamondTipsImageJ2ShapeData

setRadius(long) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HyperSphereImageJ2ShapeData

setRadius(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm

setRadius(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurFilter2DAlgorithm

setRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LaplacianOfGaussian2DAlgorithm

setRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateStructureElement2DAlgorithm

setRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateStructureElement3DAlgorithm

setRadius(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMaximumFilter2DAlgorithm

setRadius(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMinimumFilter2DAlgorithm

setRadius(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalVarianceFilter2DAlgorithm

setRadius(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.RemoveNaNFilter2DAlgorithm

setRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm

setRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm

setRadius(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyInternalGradient2DAlgorithm

setRadius(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm

setRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm

setRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm

setRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm

setRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm

setRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm

setRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm

setRadius(int) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.InpaintingAlgorithm

setRadius(float) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint

setRadius0(float) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm

setRadius1(float) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm

setRadius1(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.AlternatingMorphologicalFilters2DAlgorithm

setRadius1(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalFeatureContrast2DAlgorithm

setRadius1(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalTextureContrast2DAlgorithm

setRadius2(float) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm

setRadius2(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.AlternatingMorphologicalFilters2DAlgorithm

setRadius2(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalFeatureContrast2DAlgorithm

setRadius2(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalTextureContrast2DAlgorithm

setRadiusIncrement(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

setRadiusX(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm

setRadiusX(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm

setRadiusX(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm

setRadiusX(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm

setRadiusX(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm

setRadiusX(float) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

setRadiusXY(float) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.FindMaxima3DAlgorithm

setRadiusY(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm

setRadiusY(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm

setRadiusY(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm

setRadiusY(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm

setRadiusY(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm

setRadiusY(float) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

setRadiusZ(float) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.FindMaxima3DAlgorithm

setRadiusZ(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm

setRadiusZ(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm

setRadiusZ(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm

setRadiusZ(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm

setRadiusZ(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm

setRadiusZ(float) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

setRatio(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

setRatio(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ExpandLabelsAlgorithm

setRatio(double) - Method in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.FixedRatio

setRatio(JIPipeDesktopSplitPane.Ratio) - Method in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane

setRead(boolean) - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableLogEntry

setReadyLabel(String) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

setReagentSetDescription(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

setReagentSetDescriptionAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

setReagentSetIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROScreenReferenceAlgorithm

setReagentSetIdentifier(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

setRecalibrate(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.DivideByMaximumAlgorithm

setRectangleMode(ExtractROIProfileAlgorithm.RectangleMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractROIProfileAlgorithm

setRectangles(Margin.List) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawOvalRoiAlgorithm

Deprecated.

setRectangles(Margin.List) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm

Deprecated.

setRectangles(Margin.List) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.AppendRectangularRoiAlgorithm

Deprecated.

setRectangles(RectangleList) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.DefineRectangularRoiAlgorithm

Deprecated.

setRectangles(Margin.List) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.ReferencedAppendRectangularRoiAlgorithm

Deprecated.

setRectangles(Margin.List) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.ReferencedDefineRectangularRoiAlgorithm

Deprecated.

setRecursive(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListFiles

setRecursive(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListSubfolders

setRecursiveFollowsLinks(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListFiles

setRecursiveFollowsLinks(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListSubfolders

setRed(int) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

setRedirectDocumentationTarget(JIPipeDesktopFormPanel) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

setRedirectImage(ImagePlus) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Set the "Redirect To" image.

setRedThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

setReferenceCIndex(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistrationAlgorithmRule

setReferenceColumns(Set<String>) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

Sets the reference columns An empty list merges all data into one batch Setting it to null splits all data into a separate batch

setReferenceColumns(JIPipeColumMatching, StringQueryExpression) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

setReferenceColumns(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm

setReferenceColumns(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementMergingAlgorithm

setReferenceTextAnnotationColumns(Set<String>) - Method in class org.hkijena.jipipe.api.JIPipeDataBatchGenerationResult

setReferenceTIndex(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistrationAlgorithmRule

setReferenceZIndex(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistrationAlgorithmRule

setRegexString(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtraction

setRegistry(JIPipe) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

setRegistry(JIPipe) - Method in interface org.hkijena.jipipe.JIPipeJavaPlugin

Sets the registry

setRegistry(JIPipe) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

Sets the registry instance

setRegistry(JIPipe) - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionLoaderPlugin

setReinterpret(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color.ColorSpaceConverterAlgorithm

setRelativeDistances(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm

setRelativeDistances(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm

setRelativeDistances(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm

setRelativeToProjectDir(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter

setRelativeToProjectDir(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataTableByParameter

setRelativeToProjectDir(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.ExportROI3DAlgorithm

Deprecated.

setRelativeToProjectDir(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm

Deprecated.

setRelativeToProjectDir(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportROIAlgorithm

Deprecated.

setRelativeToProjectDir(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm

Deprecated.

setRelativeToProjectDir(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm

Deprecated.

setRelativeToProjectDir(boolean) - Method in class org.hkijena.jipipe.plugins.scene3d.nodes.ExportScene3DToColladaAlgorithm

Deprecated.

setRelativizePaths(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.JIPipeFilesystemPluginApplicationSettings

setRememberSettings(boolean) - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToFilesByMetadataExporterRun.Settings

setRemoveColumn(boolean) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RemoveArrayAnnotationsAlgorithm

setRemoveDuplicates(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm

setRemoveExistingAnnotationsFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.OverwriteAnnotations

setRemoveExtensions(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimplePathAnnotationGenerator

setRemoveInX(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm

setRemoveInX(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.RemoveBorderFilaments

setRemoveInY(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm

setRemoveInY(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.RemoveBorderFilaments

setRemoveInZ(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm

setRemoveInZ(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.RemoveBorderFilaments

setRemoveLut(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

setRemoveLut(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImagePlusAlgorithm

setRemoveNegativeValues(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm

setRemoveOutputAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.ConvertToAnnotationTable

setRemoveOverlay(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImagePlusAlgorithm

setRenameFunction(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.SimplifyAnnotationsAlgorithm

setRenamingEntries(StringQueryExpressionAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameSingleColumnsAlgorithm

setRenamingEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumns2Algorithm

setRenamingEntries(StringQueryExpressionAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumnsAlgorithm

Deprecated.

setRenamingEntries(StringQueryExpressionAndStringQueryPairParameter.List) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm

setRenamingItems(StringQueryExpressionAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RenameAnnotation

setRenamingItems(StringQueryExpressionAndStringPairParameter.List) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.RenameDataAnnotation

setRenderCursor(boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

setRenderGreyscaleImages(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.BlendImagesAlgorithm

setRenderLabel(boolean) - Method in class org.hkijena.jipipe.plugins.pipelinerender.RenderPipelineRunSettings

setRenderOutsideEdges(boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

setRenderROIAsOverlay(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageViewerUIROI2DDisplayApplicationSettings

setRenderROIAsVolume(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ImageViewerUIROI3DDisplayApplicationSettings

setRenderShadow(boolean) - Method in class org.hkijena.jipipe.plugins.pipelinerender.RenderPipelineRunSettings

setReplaceIfExists(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.GenerateColumnAlgorithm

setReplacements(IntRangeAndIntegerPairParameter.List) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.ReplaceLabelsAlgorithm

setReport(JIPipeValidationReport) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopValidityReportUI

setRepositories(JIPipeArtifactRepositoryReferenceList) - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

setRepository(String) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryReference

setRequireColocalization(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings

setRequireColocalization(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm

setRequireColocalization(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

setRequireColocalization(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm

setRequireDirection(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

setResample(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationPerformanceSettings_Old

Deprecated.

setResample(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTweaksSettings

setResizeLeftSidebar(boolean) - Method in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane.DynamicSidebarRatio

setResolution(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

setResourceClass(Class<?>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

setRestoreAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.forms.algorithms.IteratingFormProcessorAlgorithm

setRestoreOriginalAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DReferencedAlgorithm

setRestoreOriginalAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DSingleAlgorithm

setRestoreOriginalAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

setRestoreOriginalAnnotations(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementMergingAlgorithm

setRestoreTabs(boolean) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

setRestoreTabs(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectDefaultsApplicationSettings

setRestrictToChannels(OptionalIntegerRange) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.RemoveLUTAlgorithm

setRestrictToChannels(OptionalIntegerRange) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorMapAlgorithm

setRestrictToChannels(OptionalIntegerRange) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm

setRestrictToChannels(OptionalIntegerRange) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromImageAlgorithm

setRestrictToIndices(OptionalIntegerRange) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm

setRestrictToROI(boolean) - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

setResultsTable(ResultsTable) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

setReverseSortOrder(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm

setReverseSortOrder(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.SortTableColumnsAlgorithm

setReverseSortOrder(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.SortTableRowsAlgorithm

setRExecutablePath(Path) - Method in class org.hkijena.jipipe.plugins.r.REnvironment

setRgbUseRender(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

setRibbon(JIPipeDesktopRibbon) - Method in class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopTableEditor

setRidgeThreshold(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXInitializationParameters

setRight(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

setRight(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.InnerMargin

setRight(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

setRightPanelIsFloating(boolean) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

setRightPanelWidth(int) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

setRightPanelWidth(int) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.State

setRightSplitPaneRatio(double) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.State

setRod(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationParameters

setRoi(Margin) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm

SetROI3DMetadataFromTableAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata

SetROI3DMetadataFromTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.SetROI3DMetadataFromTableAlgorithm

SetROI3DMetadataFromTableAlgorithm(SetROI3DMetadataFromTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.SetROI3DMetadataFromTableAlgorithm

setRoiCanvas(Roi, ImagePlus, ImageCanvas) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Uses reflection to manually set the canvas of a Roi Please note that the image of the Roi will be set.

setRoiComment(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

setRoiComment(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

setRoiComment(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

setRoiDataAnnotation(OptionalDataAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractROIProfileAlgorithm

setRoiDrawer(RoiDrawer) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageViewerUIROI2DDisplayApplicationSettings

setRoiFilterExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.FilteringParameters

SetRoiImageAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Wrapper around RoiManager

SetRoiImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.SetRoiImageAlgorithm

Instantiates a new node type.

SetRoiImageAlgorithm(SetRoiImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.SetRoiImageAlgorithm

Instantiates a new node type.

setRoiIndexAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractROIProfileAlgorithm

setRoiIndexColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata.SetROI3DMetadataFromTableAlgorithm

setRoiIndexColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetROIMetadataFromTableAlgorithm

SetRoiMetadataByStatisticsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties

Wrapper around RoiManager

SetRoiMetadataByStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm

Instantiates a new node type.

SetRoiMetadataByStatisticsAlgorithm(SetRoiMetadataByStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm

Instantiates a new node type.

SetRoiMetadataByStatisticsAlgorithm.MetadataProperty - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties

SetROIMetadataFromTableAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties

SetROIMetadataFromTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetROIMetadataFromTableAlgorithm

SetROIMetadataFromTableAlgorithm(SetROIMetadataFromTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetROIMetadataFromTableAlgorithm

setRoiName(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm

setRoiName(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

setRoiName(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

setRoiName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentCyclesToROIAlgorithm

setRoiName(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode

setRoiName(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertTracksToRoiNode

setRoiName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualLocationROIProperties

setRoiName(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualROIProperties

setRoiName(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

setRoiName(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

setRoiName(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

setRoiName(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

setRoiName(String) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

setRoiNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractROIProfileAlgorithm

setRoiNameExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

setRoiNameExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

setRoiNameExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LinesHoughDetection2DAlgorithm

setRoiProperties(Roi, Map<String, String>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Sets the properties of a Roi from a map

setRoiPropertiesFromString(Roi, String, String) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Sets ROI properties from a JSON string or

setRois(ROI3DListData) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

setRois(ROI2DListData, boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

setRoiToLabelTransformation(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm

setRole(JIPipeDataSlotRole) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

setRollingBallRadius(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm

setRotate(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ResliceAlgorithm

setRotate(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Reslicer

setRotateTemplate(IntegerRange) - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

setRotationDirection(TransformRotate2DAlgorithm.RotationMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm

setRotationRange(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.register.RegisterRoiToImageByBrightnessAlgorithm

setRotations(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm

setRow(int) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

setRowAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

setRowCountAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm

setRowGenerator(Supplier<List<Object>>) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

setRowList(List<JIPipeDataTableRowInfo>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

Sets list of rows

setRowMergingStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.ColumnsToAnnotationsAlgorithm

setRowNormalization(TableColumnNormalization) - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSimpleAlgorithm

setRowNormalization(TableColumnNormalization) - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm

setRowNormalization(TableColumnNormalization) - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementMergingAlgorithm

setRows(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

setRows(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.MontageToStackAlgorithm

setRows(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

setRowSelector(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromTableAlgorithm

setRowSelector(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

setRowStorageFolder(Path) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataAnnotationInfo

setRScriptExecutablePath(Path) - Method in class org.hkijena.jipipe.plugins.r.REnvironment

setRules(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DReferencedAlgorithm

setRules(ParameterCollectionList) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DSingleAlgorithm

setRuleType(TurboRegRegistrationAlgorithmRuleType) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistrationAlgorithmRule

setRunnable(boolean) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo

setRunSets(List<JIPipeProjectRunSet>) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectRunSetsConfiguration

setRuntimePartition(RuntimePartitionReferenceParameter) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

setRuntimeProject(JIPipeProject) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

Sets the project.

setRuntimeProject(JIPipeProject) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

setRuntimeProject(JIPipeProject) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Sets the current project associated with the current run

setSample(ImportImageJSampleAlgorithm.Sample) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImageJSampleAlgorithm

setSaturate(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter

setSaturatedPixels(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm

setSaturationThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

setSavedState(JIPipeDesktopDockPanel.State) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

setSaveRGBWithImageJ(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesApplicationSettings

setSaveROI(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEExporterSettings

setSaveToDisk(boolean) - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRunSettings

setScale(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.InputImagesToMontage

Deprecated.

setScale(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

setScaleFactor(double) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanelImageComponent

setScaleFactor(double) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopImageFrameComponent

setScaleMode(ScaleMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

setScaleMode(ScaleMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator.ImageParameters

setScaleRange(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.register.RegisterRoiToImageByBrightnessAlgorithm

setScales(DoubleList) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures

setScaleVectorPercentage(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm

setScaleX(double) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

setScaleX(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

setScaleX(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

setScaleX(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

setScaleX(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

setScaleX(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ScaleRoiAlgorithm

setScaleX(double) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

setScaleY(double) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters

setScaleY(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm

setScaleY(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm

setScaleY(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm

setScaleY(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm

setScaleY(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ScaleRoiAlgorithm

setScaleY(double) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIEditor

setScaling(double) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.features.SymmetryFilter3DAlgorithm

setScheduledSelection(Set<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

setScoreAccumulationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ScoreParameters

setScoreExpression(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ScoreParameters

setScoringFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

setScoringFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm

setScratchBaseDirectory(Path) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

setScratchBaseDirectory(Path) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Sets the scratch base directory of the current run.

setScreenId(long) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

setScreenIds(LongList) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROScreenReferenceDataSource

setScript(RScriptParameter) - Method in class org.hkijena.jipipe.plugins.r.algorithms.IteratingRScriptAlgorithm

setScript(RScriptParameter) - Method in class org.hkijena.jipipe.plugins.r.algorithms.MergingRScriptAlgorithm

setScrollable(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

setScrollPane(JScrollPane) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantTableModel

setScrollPane(JScrollPane) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableModel

setScrollPane(JScrollPane) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

setScrollPane(JScrollPane) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableModel

setScrollPane(JScrollPane) - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerTableModel

setScrollPane(JScrollPane) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

setSearchFindExistingNodes(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.NodeSearchSettings

setSearchFindNewNodes(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.NodeSearchSettings

setSecond(ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceCube

setSecondColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm

setSeedsThreshold(int) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm

setSeedsThreshold(int) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.Watershed3DSegmentationAlgorithm

setSegmentationImageDataAnnotation(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.plugins.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm

setSegmentationMethod(SpotSegmentation3DAlgorithm.SpotSegmentationMethod) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm.SpotSegmentationSettings

setSegmentationModel(PretrainedCellpose3SegmentationModel) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

setSegmentedChannel(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

setSegmentedChannel(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2ChannelSettings

setSegmentResultsMethod(IterativeThreshold3DAlgorithm.SegmentResultsMethod) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

setSelectColorPrompt(String) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopColorChooserButton

setSelected(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopCheckBoxRibbonAction

setSelected(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopToggleButtonRibbonAction

setSelectedColor(Color) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopColorChooserButton

setSelectedColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableColumnToImageAlgorithm

setSelectedDataTypes(Set<JIPipeDataInfo>) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker

setSelectedIndices(IntegerRange) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.SliceROIListAlgorithm

setSelectedIndices(OptionalIntegerRange) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2

setSelectedInfo(JIPipeDataInfo) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddAlgorithmSlotPanel

setSelectedInfo(JIPipeParameterTypeInfo) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddParameterDialog

setSelectedInfo(JIPipeDataInfo) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopEditAlgorithmSlotPanel

setSelectedInfos(Set<JIPipeNodeInfo>) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker

setSelectedItem(T) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPickDynamicEnumValueDialog

setSelectedItem(Object) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPickEnumValueDialog

setSelectedItem(T) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopPickerDialog

setSelectedNode(JIPipeGraphNode) - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopPickNodeDialog

setSelectedROI(Collection<ROI3D>, boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

setSelectedROI(Collection<Roi>, boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

setSelectedTab(String) - Method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopJIPipeProjectTabMetadata

setSelectedValue(T) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopToggleButtonPanel

Sets the selected toggle button based on the provided model value.

setSelection(Set<JIPipeDesktopGraphNodeUI>) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

setSelection(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm

Deprecated.

setSelectionInterval(int, int) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMultiSelectionModel

setSelectionInterval(int, int) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopSingleSelectionModel

setSelectTopN(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LinesHoughDetection2DAlgorithm

setSeparateChannels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm

setSeparateNuclei(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.NucleiSegmentation3DAlgorithm

setSeriesAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

setSeriesIdsAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm

setSeriesName(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTables2Algorithm

setSeriesName(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.plots.nodes.PlotTablesAlgorithm

Deprecated.

setSeriesNamesAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm

setSeriesToImport(IntegerList) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

setSessionId(String) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItem

setSessionId(String) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItemCollection

setSetter(Function<Object, Boolean>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

Sets the setter

setSetter(Consumer<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

Sets the setter

setSetter(Method) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

setShapeType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.plugins.imagej2.algorithms.CreateIJ2ShapeAlgorithm

setSheetNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportResultsTableAlgorithm

setSheetNameExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm

Deprecated.

setSheetNameExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2

setSheets(StringList) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportResultsTableAlgorithm

setShortKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

Sets the short key

setShortKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

setShortKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

setShowAfterMinRuntime(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

setShowCompartmentsRunPanelInOverview(boolean) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

setShowConnectionIssueBallon(boolean) - Method in class org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactApplicationSettings

setShowDescriptions(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.NodeSearchSettings

setShowFilaments(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.settings.ImageViewerUIFilamentDisplayApplicationSettings

setShowHierarchySelection(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.NodeSearchSettings

setShowHorizontal(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

setShowInProjectOverview(boolean) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

setShowInProjectOverview(boolean) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartmentOutput

setShowIntroduction(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

setShowLimitedParameters(boolean) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment

setShowLimitedParameters(boolean) - Method in class org.hkijena.jipipe.api.grouping.JIPipeNodeGroup

setShowName(boolean) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.GroupHeaderFormData

setShowName(boolean) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.ParameterFormData

setShowNotificationsAfterFirstStart(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

setShowParameterSearchBar(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

setShowProjectInfo(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

setShowROI(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ImageViewerUIROI3DDisplayApplicationSettings

setShowROI(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.settings.ImageViewerUIROI2DDisplayApplicationSettings

setShowRunNotifications(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

setShowRunOnlyIfInactive(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeNotificationUIApplicationSettings

setShowSideBar(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeTableViewerUIApplicationSettings

setShowSpots(boolean) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUISpotsDisplayApplicationSettings

setShowToolbarLabels(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings.DockLayoutSettings

setShowToolbarLabels(boolean) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

setShowToolInfo(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setShowTracks(boolean) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUITracksDisplayApplicationSettings

setShowVertical(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

setShuffleLut(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToRGBAlgorithm

setSideBarVisible(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentPanel

setSigma(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.AddNoise2DAlgorithm

setSigma(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

setSigma(double) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaborKernelGenerator

setSigma(double) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaussianKernelGenerator

setSigma0X(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm

setSigma0Y(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm

setSigma1X(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm

setSigma1Y(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm

setSigmaColor(double) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.filters.BilateralFilterAlgorithm

setSigmaSpace(double) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.filters.BilateralFilterAlgorithm

setSigmaX(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.GaussianBlur2DAlgorithm

setSigmaX(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm

setSigmaY(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.GaussianBlur2DAlgorithm

setSigmaY(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm

setSigmaZ(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm

setSilencedPlugins(Set<String>) - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry.Settings

setSilent(boolean) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

setSilent(boolean) - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

setSilent(boolean) - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRunSettings

setSilent(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeExtensionApplicationSettings

setSilentlyOverride(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ReorderHyperstackSlicesExpressionAlgorithm

SetSingleAnnotation - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Algorithm that annotates all data with the same annotation

SetSingleAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.SetSingleAnnotation

SetSingleAnnotation(SetSingleAnnotation) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.SetSingleAnnotation

Copies the algorithm

SetSingleAnnotation.VariablesInfo - Class in org.hkijena.jipipe.plugins.annotation.algorithms

setSize(long) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeRemoteArtifact

setSize(Dimension) - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail

setSize(float, float) - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Sets the size of the view.

setSize(int) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaussianKernelGenerator

setSizeAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotateWithPathProperties

setSizeC(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateZeroImage

setSizeC(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateFromMathExpression2D

setSizeC(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

setSizeInfo(String) - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderPackage

setSizeInfo(String) - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage

setSizeT(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateZeroImage

setSizeT(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateFromMathExpression2D

setSizeT(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

setSizeZ(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateZeroImage

setSizeZ(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateFromMathExpression2D

setSizeZ(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

setSkipCache(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeOutputDataSlot

setSkipCenter(boolean) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData

setSkipCenter(boolean) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData

setSkipCenter(boolean) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.RectangleImageJ2ShapeData

setSkipDataGathering(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeInputDataSlot

setSkipEmpty(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator.GeneratedColumn

setSkipEmptyTarget(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm

setSkipEmptyTarget(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.merge.MergeTableColumnsSupplementMergingAlgorithm

setSkipExisting(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.CopyPath

setSkipExport(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeOutputDataSlot

setSkipGC(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeOutputDataSlot

setSkipIncompleteDataSets(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings

setSkipIncompleteDataSets(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings

setSkipInvalid(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.CopyPath

setSkipInvalidInputs(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.OutlineRoiConcaveHullMoreiraSantosAlgorithm

setSkipped(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

Used internally to mark an algorithm as (not) executed without triggering isFunctionallyEquals() Affects JIPipeGraph's getDeactivatedNodes This is not serialized, but copied

setSliceAnnotation(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ImageToTableAlgorithm

setSliceAnnotation(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.MultipleImagesToTableAlgorithm

setSliceAnnotation(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.HistogramGenerator

setSliceCLocation(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.Merge2DToHyperstackAlgorithm

setSliceFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontage2Algorithm

setSliceRange(IntegerRange) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.DataSlicer

setSliceRange(IntegerRange) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.IterationStepSlicer

setSlicesToImport(IntegerRange) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

setSliceTLocation(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.Merge2DToHyperstackAlgorithm

setSliceZero(ImagePlus, ImageProcessor, ImageSliceIndex) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Sets the slice of an image to the processor based on the index.

setSliceZLocation(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.Merge2DToHyperstackAlgorithm

setSlicingMode(FrangiVesselnessFeatures.SlicingMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.FrangiVesselnessFeatures

setSlotConfiguration(JIPipeSlotConfiguration) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

setSlotFilter(Predicate<JIPipeDataSlot>) - Method in class org.hkijena.jipipe.plugins.parameters.api.graph.SlotMapParameterCollection

setSlotLabel(String) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

setSlotLabelIsCustom(boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

setSlotName(String) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm

setSlots(List<JIPipeInputDataSlot>) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator

setSlotStatus(JIPipeDesktopGraphNodeUI.SlotStatus) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

setSlotStoragePath(Path) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot

Sets storage path that is used during running the algorithm for saving the results

setSmooth(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm

setSmooth(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm

setSmoothing(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.HessianFeatureAlgorithm

setSmoothing(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.StructureFeatureAlgorithm

setSmoothing(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.Hessian2DAlgorithm

Deprecated.

setSmoothing(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

setSmoothingScale(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DerivativesFeaturesAlgorithm

setSmoothness(int) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry

setSmoothness(int) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

setSnakePointSpacing(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXInitializationParameters

setSortedStackIds(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm

setSortFilesNumerically(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources.ImageStackFromFolder

setSortingLabelExpression(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

setSortOrder(SortOrder) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm

setSortOrder(SortOrder) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm

setSortOrder(SortOrder) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.SortRowsByExpressionAlgorithm.SortEntry

setSortOrderList(MeasurementColumnSortOrder.List) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm

Deprecated.

setSortOrderList(MeasurementColumnSortOrder.List) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2

setSortOrderList(StringQueryExpressionAndSortOrderPairParameter.List) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.SortTableRowsAlgorithm

setSortOrderList(StringQueryExpressionAndSortOrderPairParameter.List) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.SortRowsByAnnotationsAlgorithm

setSource(String) - Method in class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext

setSource(String) - Method in class org.hkijena.jipipe.api.environments.JIPipeEnvironment

setSource(String) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate

setSource(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

Sets the parameter source

setSource(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

For internal usage only

setSource(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

setSourceAnnotationFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.OverwriteAnnotations

setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm

setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm

setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator

setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator

setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator

setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator

setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm

setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm

setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm

setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm

setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm

setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm

setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm

setSourceCenter(Point) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

setSourceColumn(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.RenameTableColumns2Algorithm.RenamingEntry

setSourceDocumentation(JIPipeParameterCollection, JIPipeDocumentation) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Sets source documentation

setSourceImageIndex(ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo.Entry

setSourceInfo(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeNodeExample

setSourcePoint(PointRange) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

setSourcePoints(Vector2dParameter.List) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo.Entry

setSourceUI(JIPipeDesktopGraphNodeUI) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

setSourceVertexFilter(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

setSourceVertexFilter(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

setSourceWrapMode(SourceWrapMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression

setSpan(IntegerList) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData

setSpan(long) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData

setSpan(long) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData

setSpan(int) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.RectangleImageJ2ShapeData

setSpatialLocation(Point3d) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

setSpearmanRankCorrelation(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

setSplit(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.DefineRectangularRoiAlgorithm

Deprecated.

setSplit(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.ReferencedDefineRectangularRoiAlgorithm

Deprecated.

setSplitAfterwards(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiCalculatorAlgorithm

setSplitAtJunctions(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

setSplitBySlotName(boolean) - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToFilesByMetadataExporterRun.Settings

setSplitBySlotName(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportData

setSplitBySlotName(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ExportDataByParameter

setSplitByTrack(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

setSplitByTrack(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXResultAnalysisAlgorithm

setSplitC(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEExporterSettings

setSplitChannels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

setSplitChannels(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

setSplitChannels(boolean) - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

setSplitCharacter(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtraction

setSplitFocalPlanes(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

setSplitFocalPlanes(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

setSplitFocalPlanes(boolean) - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

setSplitIntoConnectedComponents(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

setSplitMode(CLIJSplitMode) - Method in class org.hkijena.jipipe.plugins.clij2.CLIJCommandNode

setSplitPickedIndex(int) - Method in class org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtraction

setSplitSlices(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

setSplitT(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEExporterSettings

setSplitTimePoints(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

setSplitTimePoints(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

setSplitTimePoints(boolean) - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

setSplitZ(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEExporterSettings

setSpotCollection(SpotsCollectionData, boolean) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

setSpotDrawer(SpotDrawer) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SpotsToRGBNode

setSpotDrawer(SpotDrawer) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUISpotsDisplayApplicationSettings

setStackOrder(DimensionOrder) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

setStackOrder(DimensionOrder) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

setStackOrder(DimensionOrder) - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

setStackSizeAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

setStackSizeAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

setStandardButtonBorder(AbstractButton) - Static method in class org.hkijena.jipipe.utils.UIUtils

Makes a button flat

setStandardButtonBorder(AbstractButton, Color, int, int, int, int) - Static method in class org.hkijena.jipipe.utils.UIUtils

Makes a button flat

setStandardControlBorder(T) - Static method in class org.hkijena.jipipe.utils.UIUtils

setStart(Scene3DLineGeometry.LineEndPoint) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry

setStartAt(Reslicer.Direction) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Reslicer

setStartPointSelectorFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.FindLinearFilamentVertexOrderAlgorithm

setStartsAtMean(boolean) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

setStartSlice(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm

setState(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopCheckBoxRibbonAction

setState(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopToggleButtonRibbonAction

setState(boolean) - Method in class org.hkijena.jipipe.utils.CustomStateLessToggleButton

setStatistics(ROI3DMeasurementSetParameter) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.Measurement3DSettings

setStatistics(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MeasurementDrawerPlugin2D.Settings

setStatistics(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.Measurement2DSettings

setStatisticsParameters(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.FindParticles2D

setStatus(String) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.JIPipeLogger

setStatus(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

setStatusMessage(String) - Method in class org.hkijena.jipipe.plugins.batchassistant.DataBatchStatusData

setStatusUpdatedEventEmitter(JIPipeProgressInfo.StatusUpdatedEventEmitter) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

setStatusValid(boolean) - Method in class org.hkijena.jipipe.plugins.batchassistant.DataBatchStatusData

setStepSize(double) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.NumberRangeParameterGenerator

setStepsPerScale(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SIFTParameters

setStitchThreshold(double) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationThresholdSettings_Old

Deprecated.

setStitchThreshold(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2SegmentationThresholdSettings

setStitchThreshold(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeSegmentationThresholdSettings

setStitchTiles(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

setStitchTiles(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

setStitchTiles(boolean) - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

setStopSlice(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm

setStopThreshold(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

setStoragePath(Path) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Sets the storage path.

setStoreIntermediateResults(boolean) - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRunSettings

setStoreToCache(boolean) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

setStoreToCache(boolean) - Method in class org.hkijena.jipipe.desktop.app.quickrun.JIPipeDesktopQuickRunSettings

setStoreToDisk(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

setStoreToDisk(boolean) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration

setStretchFactor(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

setStretchHistogram(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.ImageJContrastEnhancerAlgorithm

setStretchHistogram(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo16BitAutoContrastAlgorithm

setStretchHistogram(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ConvertImageTo8BitAutoContrastAlgorithm

setStrict(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm

setStringValue(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.StringOrDouble

setStrokeColor(Color) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer

setStrokeColor(Color) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

setStrokeColorEdgeFeature(EdgeFeature) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

setStrokeColorFeature(SpotFeature) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer

setStrokeColorMode(TrackDrawer.StrokeColorMode) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

setStrokeColorTrackFeature(TrackFeature) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

setStrokeWidth(int) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer

setStrokeWidth(int) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

setStructureElement(Strel.Shape) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.AlternatingMorphologicalFilters2DAlgorithm

setStructureElement(Strel.Shape) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalFeatureContrast2DAlgorithm

setStructureElement(Strel.Shape) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalTextureContrast2DAlgorithm

setStyle(JIPipeNotificationAction.Style) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction

setSubFolder(String) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListFiles

setSubFolder(String) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ListSubfolders

setSubPath(Path) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ConcatenateByParameter

Sets the subfolder

setSubtract(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm

setSuffix(String) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.TemporaryFileDataSource

setSumColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator

setSummary(HTMLText) - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

setSupportsLinux(boolean) - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

setSupportsMacOS(boolean) - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

setSupportsWindows(boolean) - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

setSuppressLogs(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2SegmentationInferenceAlgorithm

setSuppressLogs(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

setSuppressLogs(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseInferenceAlgorithm

setSuppressLogs(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3DenoiseTrainingAlgorithm

setSuppressLogs(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationInferenceAlgorithm

setSuppressLogs(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

setSuppressLogs(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2InferenceAlgorithm

Deprecated.

setSuppressLogs(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

setSuppressLogs(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0InferenceAlgorithm

setSuppressLogs(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

setSuppressLogs(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0InferenceAlgorithm

Deprecated.

setSuppressLogs(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

setSuppressLogs(boolean) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.IteratingPythonScriptAlgorithm

setSuppressLogs(boolean) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.MergingPythonScriptAlgorithm

setSuppressLogs(boolean) - Method in class org.hkijena.jipipe.plugins.python.algorithms.python.PythonScriptAlgorithm

setSuppressStripesMode(FFTBandPassFilter.SuppressStripesMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter

setSwapDimensions(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm.BioFormatsSettings

setSwapDimensions(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

setSwapDimensions(boolean) - Method in class org.hkijena.jipipe.plugins.omero.parameters.ImageImportParameters

setSwitchPanningDirection(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setSwitchToProjectInfoOnUnknownProject(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

setT(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

setT(TIntList) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndices

setTab(String) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.FormData.TabSettings

setTabAnnotation(String) - Method in class org.hkijena.jipipe.plugins.forms.algorithms.IteratingFormProcessorAlgorithm

setTabAnnotation(String) - Method in class org.hkijena.jipipe.plugins.forms.algorithms.MergingFormProcessorAlgorithm

setTabAnnotation(String) - Method in class org.hkijena.jipipe.plugins.forms.algorithms.SimpleIteratingFormProcessorAlgorithm

setTabAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.FormData.TabSettings

setTable(ResultsTable) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

setTableColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column

setTableModel(ResultsTableData) - Method in class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopTableEditor

setTableRow(JIPipeDataTableRowInfo) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataAnnotationInfo

setTables(ResultsTableDataList) - Method in class org.hkijena.jipipe.plugins.tables.nodes.DefineTablesAlgorithm

setTabPanelBorder(Border) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

setTagListAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.parameters.AnnotationsToOMEROTagExporter

setTagsToListAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.parameters.OMEROTagToAnnotationImporter

setTagsToListFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.omero.parameters.OMEROTagToAnnotationImporter

setTarget(Path) - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata

setTargetArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnnotateByImageStatisticsExpressionAlgorithm

setTargetArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm

setTargetArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm

setTargetArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm

setTargetArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.MergeImagesAlgorithm

setTargetArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.SimpleImageAndRoiIteratingAlgorithm

setTargetC(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm

setTargetC(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ReorderRoiDimensionsAlgorithm

setTargetCenter(Point) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

setTargetColumnName(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.ImageToTableColumnAlgorithm

setTargetDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm

setTargetDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackCombinerAlgorithm

setTargetDimensionAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm

setTargetImageIndex(ImageSliceIndex) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo.Entry

setTargetPoint(PointRange) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

setTargetPoints(Vector2dParameter.List) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo.Entry

setTargetRect(int, int, int, int) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneGhostGlassPane

setTargetT(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm

setTargetT(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ReorderRoiDimensionsAlgorithm

setTargetUI(JIPipeDesktopGraphNodeUI) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.DisplayedSlotEdge

setTargetVertexFilter(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesAlgorithm

setTargetVertexFilter(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ConnectVerticesFastAlgorithm

setTargetZ(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm

setTargetZ(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ReorderRoiDimensionsAlgorithm

setTasks(List<JIPipeDesktopRibbon.Task>) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon

setTasksFinishedLabel(String) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

setTaskSingleEnqueuedRunningLabel(String) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

setTaskSingleRunningLabel(String) - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

settAxis(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm

setTempDirectory(OptionalPathParameter) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeRuntimeApplicationSettings

setTemplate(JIPipeDynamicParameterCollection) - Method in class org.hkijena.jipipe.plugins.parameters.library.collections.ParameterCollectionList

Sets the template for new items

setTemplateDescription(String) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

setTemplateMatchingMethod(TemplateMatchingMethod) - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

setTemporaryDocument(MarkdownText) - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopMarkdownReader

Sets the document to some temporary one without changing the reference to the main document

setText(String) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData

setText(String) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyPasswordField

setText(String) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyReadOnlyTextArea

setText(String) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyReadOnlyTextField

setText(String) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyTextField

setText(String) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopReadonlyCopyableTextField

setText(String) - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

setText(String) - Method in class org.hkijena.jipipe.desktop.commons.components.search.JIPipeDesktopSearchTextField

setText(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm

setTextAnnotation(int, String, String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Sets a text annotation

setTextAnnotation(int, JIPipeTextAnnotation) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Sets a text annotation

setTextAnnotationFilter(AnnotationQueryExpression) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PullDataTableAnnotations

setTextAnnotationFilter(AnnotationQueryExpression) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PushDataTableAnnotations

setTextAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableArchive

setTextAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.ImportDataTableDirectory

setTextAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PullDataTableAnnotations

setTextAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.datatable.PushDataTableAnnotations

setTextAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.ImportJIPipeSlotFolderAlgorithm

setTextAnnotations(List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableRowInfo

Sets annotations

setTextColor(Color) - Method in class org.hkijena.jipipe.plugins.core.nodes.JIPipeCommentNode

setTextColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings

setTextColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

setTextColor(Color) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings

setTextContent(String) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode

setTextPaneFont(JTextPane, String, int) - Static method in class org.hkijena.jipipe.utils.UIUtils

setTextProcessor(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.strings.nodes.text.ProcessTextDataAlgorithm

setTextTitle(String) - Method in class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode

setTheme(JIPipeDesktopUITheme) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

setTheta(double) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaborKernelGenerator

setThetas(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.GlobalLinesHoughDetection2DAlgorithm

setThetas(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.LineSegmentsHoughDetection2DAlgorithm

setThinLines(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm

setThreadPool(JIPipeFixedThreadPool) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNodeRunContext

Sets the thread tool for parallelization

setThreads(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.RunJIPipeProjectAlgorithm

setThreshold(int) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.binary.DistanceMap3DAlgorithm

setThreshold(int) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.binary.ErodedVolumeFraction3DAlgorithm

setThreshold(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

setThreshold(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm

setThreshold(float) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm

setThreshold(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.MaskToRoiAlgorithm

setThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm

setThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm

setThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm

setThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm

setThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters

setThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm

setThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters

setThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm

setThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters

setThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm

setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm

setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm

setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm

setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm

setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm

setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm

setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm

setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm

setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm

setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm

setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm

setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm

setThresholdCalculationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm

setThresholdCalculationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters

setThresholdCalculationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm

setThresholdCalculationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters

setThresholdCalculationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm

setThresholdCalculationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters

setThresholdCombinationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm

setThresholdCombinationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm

setThresholdCombinationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters

setThresholdCombinationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm

setThresholdCombinationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters

setThresholdCombinationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm

setThresholdCombinationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters

setThresholdCombinationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

setThresholdCriteriaExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.FilteringParameters

setThresholdMethod(IterativeThreshold3DAlgorithm.ThresholdMethod) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

setThresholdMode(AutoThreshold2DAlgorithm.SliceThresholdMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm

setThresholdMode(AutoThreshold2DAlgorithm.SliceThresholdMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm

setThresholdMode(AutoThreshold2DAlgorithm.SliceThresholdMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm

setThresholdMode(AutoThreshold2DAlgorithm.SliceThresholdMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm

setThresholdMode(AutoThreshold2DAlgorithm.SliceThresholdMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm

setThresholdMode(AutoThreshold2DAlgorithm.SliceThresholdMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm

setThresholdMode(AutoThreshold2DAlgorithm.SliceThresholdMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm

setThresholdRegression(AutoThresholdRegression.Implementation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

setThresholds(IntegerRange) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm

setThumbnail(JIPipeThumbnailData) - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore

Sets the thumbnail

setThumbnails(List<JIPipeDataThumbnailsMetadata.Thumbnail>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata

setTile(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationPerformanceSettings_Old

Deprecated.

setTileHeight(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

setTileInsetXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

setTileInsetXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

setTileInsetXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm

setTileInsetYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

setTileInsetYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

setTileInsetYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm

setTileOverlap(double) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.parameters.CellposeSegmentationPerformanceSettings_Old

Deprecated.

setTileRealXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

setTileRealXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

setTileRealXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm

setTileRealYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

setTileRealYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

setTileRealYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm

setTileSizeX(int) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling2DSettings

setTileSizeX(int) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling3DSettings

setTileSizeX(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

setTileSizeX(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

setTileSizeY(int) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling2DSettings

setTileSizeY(int) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling3DSettings

setTileSizeY(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

setTileSizeY(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

setTileSizeZ(int) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling3DSettings

setTileWidth(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.MontageCreator

setTileXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

setTileXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

setTileYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

setTileYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

setTimeout(int) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.SleepAlgorithm

Settings() - Constructor for class org.hkijena.jipipe.api.registries.JIPipePluginRegistry.Settings

Settings() - Constructor for class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToFilesByMetadataExporterRun.Settings

Settings() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddParameterDialog.Settings

Settings() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

Settings(Coloc2Node.Settings) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings

SETTINGS - Static variable in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MeasurementDrawerPlugin2D

Settings() - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MeasurementDrawerPlugin2D.Settings

SettingsIO - Interface in org.hkijena.jipipe.plugins.ijtrackmate.io

settingToParameter(Object) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.io.DefaultSettingsIO

settingToParameter(Object) - Method in interface org.hkijena.jipipe.plugins.ijtrackmate.io.SettingsIO

settingToParameter(Object) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.io.SpotFeaturePenaltyParameterListSettingsIO

setTitle(String) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

setTitle(String) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.DocumentTab

setTitle(String) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.SingletonTab

setTitle(String) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

Sets the plot title

setTitleAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

setTitleAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

setTitleAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

setTitleAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImagePlusAlgorithm

setTitleAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROImageAlgorithm

setTitleFilterExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ResultsTableFromGUI

setTitleFontSize(int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

setTo(JIPipeSlotConfiguration) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

setTo(JIPipeSlotConfiguration) - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration

Makes this slot configuration equivalent to the provided one

setTo(JIPipeProjectRunSet) - Method in class org.hkijena.jipipe.api.run.JIPipeProjectRunSet

setTo(JIPipeRuntimePartition) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition

setToAskOnClose(JDialog, String, String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Installs an event to the window that asks the user before the window is closes

setToAskOnClose(JFrame, String, String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Installs an event to the window that asks the user before the window is closes

setToAskOnClose(JFrame, String, String, Supplier<Boolean>) - Static method in class org.hkijena.jipipe.utils.UIUtils

Installs an event to the window that asks the user before the window is closes

setToAskOnClose(JFrame, Supplier<String>, String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Installs an event to the window that asks the user before the window is closes

SetToColorAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking

SetToColorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking.SetToColorAlgorithm

SetToColorAlgorithm(SetToColorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking.SetToColorAlgorithm

SetToContentAwareAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking

SetToContentAwareAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking.SetToContentAwareAlgorithm

SetToContentAwareAlgorithm(SetToContentAwareAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking.SetToContentAwareAlgorithm

SetToContentAwareAlgorithm.Method - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking

setToExample(JIPipeWorkbench) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm

setToExample(JIPipeWorkbench) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.BioFormatsAnnotatorAlgorithm

setToExample(JIPipeWorkbench) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.BioFormatsImporterAlgorithm

setToggleInstallationStatus(boolean) - Method in class org.hkijena.jipipe.desktop.app.plugins.artifactsmanager.JIPipeDesktopArtifactManagerUI.ArtifactEntry

setToggleInstallationStatus(boolean) - Method in class org.hkijena.jipipe.desktop.app.plugins.pluginsmanager.JIPipeDesktopPluginManagerUI.PluginEntry

setTolerance(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm

setToleranceOfDirectionPercentage(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter

setTool(ImageViewerPanelCanvas2DTool) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

setToolbarWithLabelsWidth(int) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

setToolbarWithoutLabelsWidth(int) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

setToolInfoDistance(int) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGraphEditorUIApplicationSettings

setTooltip(String) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction

setTop(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

setTop(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.InnerMargin

setTop(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

setTotalOverlapAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm

setToUniformColor(Color) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerOpacityLUTEditor

setToUniformColorByDialog() - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerOpacityLUTEditor

SetToValueAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking

SetToValueAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking.SetToValueAlgorithm

SetToValueAlgorithm(SetToValueAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking.SetToValueAlgorithm

setTrack(int) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.layout.MSTGraphAutoLayoutImplementation.Node

setTrackAnnotationName(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

setTrackAnnotationName(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXResultAnalysisAlgorithm

setTrackBackgroundGenerator(PaintGenerator) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI.TrackRenderer

setTrackCollection(TrackCollectionData) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

setTrackDisplayMode(DisplaySettings.TrackDisplayMode) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

setTrackDrawer(TrackDrawer) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.TracksToRGBNode

setTrackDrawer(TrackDrawer) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.settings.ImageViewerUITracksDisplayApplicationSettings

setTrackIDAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode

setTrainingFeatures(WekaFeatureSet2D) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature2DSettings

setTrainingFeatures(WekaFeatureSet3D) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature3DSettings

setTrainSizeModel(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp2.Cellpose2TrainingAlgorithm

setTrainSizeModel(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.algorithms.cp3.Cellpose3SegmentationTrainingAlgorithm

setTrainSizeModel(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

setTrainSizeModel(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.LegacyCellpose2TrainingAlgorithm

Deprecated.

setTrainSizeModel(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.algorithms.Omnipose0TrainingAlgorithm

setTrainSizeModel(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.legacy.algorithms.LegacyOmnipose0TrainingAlgorithm

Deprecated.

setTraits(List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableRowInfo

Compatibility function to allow reading tables in an older format

setTransformation(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyMathExpression2DAlgorithm

setTransformation(ApplyTransform2DAlgorithm.Transformation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyTransform2DAlgorithm

setTransformation(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm

setTransformation(LegacyApplyMath2DAlgorithm.Transformation) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyApplyMath2DAlgorithm

Deprecated.

setTransformation(TurboRegTransformationType) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegImage

Set or modify the transformation.

setTransformation(TurboRegTransformationType) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegPointHandler

Reset the landmarks to their initial position for the given transformation.

setTransformation(TurboRegTransformationInfo) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegResult

setTransformationType(TurboRegTransformationType) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DReferencedAlgorithm

setTransformationType(TurboRegTransformationType) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DSingleAlgorithm

setTransformationType(TurboRegTransformationType) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo.Entry

setTransformedTargetImage(ImagePlus) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegResult

setTree(JIPipeParameterTree) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterAccessTreeUI

setTreeExpandedState(JTree, boolean) - Static method in class org.hkijena.jipipe.utils.UIUtils

setTrueDataType(String) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataAnnotationInfo

setTrueDataType(String) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableRowInfo

setTrueString(OptionalStringParameter) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.BooleanFormData

setTrySolveJunctions(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

setType(JIPipeArtifactRepositoryType) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryReference

setType(String) - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderPackage

setType(JIPipeParameterTypeInfoRef) - Method in class org.hkijena.jipipe.desktop.commons.components.parameters.JIPipeDesktopDynamicParameterEditorDialog.ParameterEntry

setType(DirectionalFilter.Type) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm

setType(DrawLineOvalRectangleRoiAlgorithm.RoiType) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm.Entry

setType(JIPipeParameterTypeInfoRef) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column

setType(JIPipeParameterTypeInfoRef) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column

setType(String) - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage

setType(OpenCvType) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.ConvertTypeAlgorithm

setType(PythonEnvironmentType) - Method in class org.hkijena.jipipe.plugins.python.PythonEnvironment

setTypeAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.AnnotateWithPathProperties

setTypeAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.omero.nodes.annotate.AnnotateOMEROWellReferenceAlgorithm

setUiAllowedParameterTypes(Set<Class<?>>) - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeParameterTypeInfoRef

setUiLocked(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

setUIOrder(int) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder

Sets the UI order

setUIOrder(int) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess

setUiOrder(int) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node

setUIOrder(int) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess

setUiOrder(int) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

setUiRestrictToCompartments(Set<UUID>) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection

setUiShape(JIPipeGraphEdge.Shape) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphEdge

setUiVisibility(JIPipeGraphEdge.Visibility) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphEdge

setUniformStrokeColor(boolean) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer

setUniqueStackIds(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm

setUnit(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

setUnsavedMeasurements(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

setup() - Method in class org.hkijena.jipipe.desktop.app.cache.exporters.JIPipeDesktopDataTableToFilesByMetadataExporterRun

Opens the necessary dialogs

setup() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun

Opens the necessary dialogs

setUpdateSiteDependencies(JIPipeImageJUpdateSiteDependency.List) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectMetadata

setUpdateSiteDependenciesParameter(JIPipeImageJUpdateSiteDependency.List) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

setUpdateWithHexCode(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopColorChooserButton

setupLogger(CommandLine, DefaultExecutor, boolean, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.python.PythonUtils

setupLogger(CommandLine, DefaultExecutor, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.ProcessUtils

setupPanels(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ImagePlusDataViewer

setupPanelsOnce(JIPipeDesktopDockPanel) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.display.viewers.ImagePlusDataViewer

setUpperThreshold(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm

setUriList(StringList) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.URIListDataSource

setUrl(String) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryReference

setUrl(String) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeRemoteArtifact

setUrl(String) - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

setUrl(String) - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderPackage

setUrl(String) - Method in class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency

setUrl(String) - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage

setUrl(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROAnnotationReferenceData

setUrl(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMERODatasetReferenceData

setUrl(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROImageReferenceData

setUrl(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROPlateReferenceData

setUrl(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROProjectReferenceData

setUrl(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

setUrl(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

setUrlMultiPart(List<String>) - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

setUrls(StringList) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.DownloadFilesDataSource

setUseBioFormats(boolean) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.ImageJDataTypesApplicationSettings

setUseCustomColorMap(boolean) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

setUseExpression(boolean) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRange

setUseNaturalSortOrder(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.columns.SortTableColumnsAlgorithm

setUseNaturalSortOrder(boolean) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.SortTableRowsAlgorithm

setUseNeighbors(boolean) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature2DSettings

setUseNeighbors(boolean) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature3DSettings

setUseOutlinePaintForWhiskers(boolean) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Sets the flag that, if true, causes the whiskers to be drawn using the series outline paint, and sends a RendererChangeEvent to all registered listeners.

setUseOverlay(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

setUserDirectory(String, Path) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectDirectories

setUseResidualConnections(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

setUseResidualConnections(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2TrainingTweaksSettings

setUseResidualConnections(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeTrainingTweaksSettings

setUserModifiable(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder

setUserModifiable(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

Set this variable to make a slot not removable/editable.

setUserName(String) - Method in class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment

setUseScratchDirectory(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.datasources.TemporaryFolderDataSource

setUseSGD(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTrainingTweaksSettings

setUseStackHistogram(boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm

setUseStyleVector(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

setUseStyleVector(boolean) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2TrainingTweaksSettings

setUseStyleVector(boolean) - Method in class org.hkijena.jipipe.plugins.omnipose.parameters.OmniposeTrainingTweaksSettings

setUseThickness(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.filter.RemoveBorderFilaments

setUseWekaNativeTiling(boolean) - Method in class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling2DSettings

setUuid(UUID) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentEdge

setUuid(UUID) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

setUUIDOf(JIPipeGraphNode, UUID) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Changes the UUID of the node

setValidateJson(boolean) - Method in class org.hkijena.jipipe.plugins.strings.datasources.ImportJsonAlgorithm

setValidateNodeTypes(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeExtensionApplicationSettings

setValidateOnSave(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeGeneralUIApplicationSettings

setValidateXml(boolean) - Method in class org.hkijena.jipipe.plugins.strings.datasources.ImportXMLAlgorithm

setValidationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.DoubleFormData

setValidationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.IntegerFormData

setValidationExpression(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

setValidationExpression(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.StringFormData

setValue(String) - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

setValue(String, T) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

Sets a parameter value

setValue(boolean) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.BooleanFormData

setValue(double) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.DoubleFormData

setValue(String) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.EnumFormData

setValue(int) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.IntegerFormData

setValue(Path) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

setValue(String) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.StringFormData

setValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesExpressionAlgorithm

setValue(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesManuallyAlgorithm

setValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.utils.FilamentEdgeMetadataEntry

setValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.utils.FilamentsVertexMetadataEntry

setValue(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

setValue(double) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeatureFilterParameter

setValue(double) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeatureFilterParameter

setValue(byte) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.ByteConstantValueImageJ2OutOfBoundsFactoryData

setValue(double) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.DoubleConstantValueImageJ2OutOfBoundsFactoryData

setValue(float) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.FloatConstantValueImageJ2OutOfBoundsFactoryData

setValue(int) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.IntegerConstantValueImageJ2OutOfBoundsFactoryData

setValue(long) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.LongConstantValueImageJ2OutOfBoundsFactoryData

setValue(short) - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.ShortConstantValueImageJ2OutOfBoundsFactoryData

setValue(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking.SetToValueAlgorithm

setValue(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyApplyMath2DAlgorithm

Deprecated.

setValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm.MetadataProperty

setValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator.GeneratedColumn

setValue(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJLogWrapper

setValue(T) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicEnumParameter

setValue(V) - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameter

setValue(String) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRange

setValue(double) - Method in class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

setValue(String) - Method in class org.hkijena.jipipe.plugins.strings.datasources.StringDefinitionDataSource

setValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2.Entry

setValue(Object) - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnConversionParameter

setValue(Object) - Method in class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnIntegrationParameter

setValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.SortRowsByExpressionAlgorithm.SortEntry

setValue(String) - Method in class org.hkijena.jipipe.utils.scripting.MacroSetting

setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableInfo

setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantTableModel

setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableModel

setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableModel

setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerTableModel

setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextTableModel

setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.plugins.parameters.library.table.ParameterTable

setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

setValueAt(Object, int, String) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

setValueAxisFontSize(int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CategoryJFreeChartPlotData

setValueAxisFontSize(int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

setValueAxisLabel(String) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CategoryJFreeChartPlotData

setValueAxisLabel(String) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

setValueAxisMaximum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CategoryJFreeChartPlotData

setValueAxisMaximum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

setValueAxisMinimum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CategoryJFreeChartPlotData

setValueAxisMinimum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData

setValueBackups(Map<String, Double>) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

setValueColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm

setValueColumn(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.UnMeltTableAlgorithm

setValueColumns(StringQueryExpression) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.MeltTableAlgorithm

setValueFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm

setValueFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

setValueMethod(int) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm

setValues(IntegerRange) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByIdAlgorithm

setValues(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column

setValues(Set<T>) - Method in class org.hkijena.jipipe.plugins.parameters.api.enums.DynamicSetParameter

setValuesAreJson(boolean) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column

setValuesAreJson(boolean) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column

SetVariableFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.variables

SetVariableFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.variables.SetVariableFunction

SetVariableIfFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.variables

SetVariableIfFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.variables.SetVariableIfFunction

SetVariablesFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.variables

SetVariablesFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.variables.SetVariablesFunction

setvBarHeight(double) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

setVectorDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.Warp2DAlgorithm

setVectorFieldType(OrientationJVectorFieldType) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.OrientationVectorField2DAlgorithm

setVersion(String) - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

setVersion(String) - Method in class org.hkijena.jipipe.api.environments.JIPipeEnvironment

setVersion(String) - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

setVersion(String) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin

Sets the version

SetVertexMetadataFromImageAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

SetVertexMetadataFromImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexMetadataFromImageAlgorithm

SetVertexMetadataFromImageAlgorithm(SetVertexMetadataFromImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexMetadataFromImageAlgorithm

SetVertexPhysicalSizeFromImageAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

SetVertexPhysicalSizeFromImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexPhysicalSizeFromImageAlgorithm

SetVertexPhysicalSizeFromImageAlgorithm(SetVertexPhysicalSizeFromImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexPhysicalSizeFromImageAlgorithm

SetVertexRadiusFromImageAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

SetVertexRadiusFromImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexRadiusFromImageAlgorithm

SetVertexRadiusFromImageAlgorithm(SetVertexRadiusFromImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexRadiusFromImageAlgorithm

SetVertexValueFromImageAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

SetVertexValueFromImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexValueFromImageAlgorithm

SetVertexValueFromImageAlgorithm(SetVertexValueFromImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SetVertexValueFromImageAlgorithm

setVerticalBarSize(OptionalQuantity) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm

setVerticalBarSize(OptionalQuantity) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm

setVerticalLabel(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings

setVerticalLabel(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings

setVertices(float[]) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DIndexedMeshGeometry

setVertices(float[]) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DUnindexedMeshGeometry

setVerticesIndex(int[]) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DIndexedMeshGeometry

setVirtual(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

setVirtualData(int, JIPipeDataItemStore) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Deprecated.

use setDataItemStore

setVirtualDataAnnotation(int, String, JIPipeDataItemStore) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Deprecated.

use setDataAnnotationItemStore

setVirtualEnvDirectory(Path) - Method in class org.hkijena.jipipe.plugins.python.installers.SelectVirtualEnvPythonInstaller.Configuration

setVisibilities(Map<String, Boolean>) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.State

setVisibility(String, boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionVisibilities

Sets the visibility of parameter with specified key

setVisible(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Action

setVisible(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Band

setVisible(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Task

setVisible(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneGhostGlassPane

setVisible(boolean) - Method in class org.hkijena.jipipe.utils.scripting.MacroFlag

setVisible(boolean) - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.Panel

setVisibleParameters(Set<String>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionVisibilities

Sets visible parameters

setvLabel(String) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

setVolumeSimilarityAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm

setVoxelsThreshold(int) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.Watershed3DSegmentationAlgorithm

setWarnNoAuthors(boolean) - Method in class org.hkijena.jipipe.plugins.settings.JIPipeProjectAuthorsApplicationSettings

setWebclientUrl(String) - Method in class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment

setWebsite(String) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

setWebsite(String) - Method in class org.hkijena.jipipe.api.JIPipeStandardMetadata

Sets the website

setWebsite(String) - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderPackage

setWebsite(String) - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage

setWeight(float) - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm

setWeightColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm

setWeightColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

setWeightDecay(double) - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.algorithms.Cellpose1TrainingAlgorithm

Deprecated.

setWeightDecay(double) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp2.Cellpose2TrainingTweaksSettings

setWeightDecay(double) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingTweaksSettings

setWeightDecay(double) - Method in class org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3SegmentationTrainingTweaksSettings

setWellId(long) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

setWellIds(LongList) - Method in class org.hkijena.jipipe.plugins.omero.nodes.datasources.OMEROWellReferenceDataSource

setWellType(String) - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

setWhiskerWidth(double) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.CustomBoxAndWhiskerRenderer

Sets the width of the whiskers as a fraction of the bar width and sends a RendererChangeEvent to all registered listeners.

setWidth(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap

setWidth(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateZeroImage

setWidth(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateFromMathExpression2D

setWidth(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

setWidth(int) - Method in class org.hkijena.jipipe.plugins.opencv.nodes.generators.GaborKernelGenerator

setWidth(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

setWidthAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.AnnotateDataWithImagePropertiesAlgorithm

setWidthAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate.ImagePropertiesToAnnotationAlgorithm

setWithEdges(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

setWithEdges(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

setWithEdges(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm

setWithEdges(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm

setWithEdges(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm

setWithEdges(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm

setWithGrid(boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopImageFrameComponent

setWithLegend(boolean) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

setWithNonMaximaSuppression(boolean) - Method in class org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

setWithParents(boolean) - Method in class org.hkijena.jipipe.plugins.filesystem.algorithms.local.CreateDirectory

Sets the subfolder

setWithRefresh(boolean) - Method in class org.hkijena.jipipe.desktop.app.parameterreference.JIPipeDesktopGraphNodeParameterReferenceGroupCollectionEditorUI

setWithSpinner(boolean) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo

setWithVertices(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm

setWithVertices(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabels2Algorithm

setWithVertices(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm

setWithVertices(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm

setWithVertices(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm

setWithVertices(boolean) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm

setWorkbench(JIPipeDesktopWorkbench) - Method in class org.hkijena.jipipe.desktop.api.JIPipeDesktopParameterEditorUI.InitializationParameters

setWorkDirectory(Path) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Sets the folder where the project is currently working in.

setWorkDirectory(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

setWrapMode(WrapMode) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.Warp2DAlgorithm

setWrappedGraph(JIPipeGraph) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

setWrappedGraph(JIPipeGraph) - Method in class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents

setWriteToAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.RunExpressionAlgorithm

setWriteToAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.plugins.utils.algorithms.RunExpressionAlgorithm

setX(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.Point3d

setX(double) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2dParameter

setX(int) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2iParameter

setX(double) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3dParameter

setX(int) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3iParameter

setX(float) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint

setX1(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm.Entry

setX1(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromExpressionsAlgorithm

setX2(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm.Entry

setX2(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromExpressionsAlgorithm

setxAxis(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.CanvasEqualizer

setxAxis(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm

setxAxis(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm

setxAxis(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

setxAxis(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm

setxAxisFontSize(int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

setxAxisLabel(String) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

setxAxisMaximum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

setxAxisMinimum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

setxOrder(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DerivativesFeaturesAlgorithm

setxPath(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.AnnotateWithXPathDataAlgorithm.Entry

setxPath(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractTextFromXMLAlgorithm

setxPath(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm.Entry

setXyAnchor(Anchor) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm

setXyAnchor(Anchor) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm

setXyStep(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.register.RegisterRoiToImageByBrightnessAlgorithm

setY(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.Point3d

setY(double) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2dParameter

setY(int) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2iParameter

setY(double) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3dParameter

setY(int) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3iParameter

setY(float) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint

setY1(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm.Entry

setY1(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromExpressionsAlgorithm

setY2(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm.Entry

setY2(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.LineMirror2DFromExpressionsAlgorithm

setyAxis(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.CanvasEqualizer

setyAxis(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm

setyAxis(NumericFunctionExpression) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm

setyAxis(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

setyAxis(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm

setyAxisFontSize(int) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

setyAxisLabel(String) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

setyAxisMaximum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

setyAxisMinimum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

setyOrder(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DerivativesFeaturesAlgorithm

setZ(double) - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.Point3d

setZ(int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

setZ(TIntList) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndices

setZ(double) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3dParameter

setZ(int) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3iParameter

setZ(float) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint

setzAnnotationName(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAX2DAlgorithm

setzAxis(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm

setzAxis(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm

setZoom(double) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

setZoom(double) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

setZoom(double) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D

setZoomBaseSpeed(double) - Method in class org.hkijena.jipipe.plugins.imageviewer.settings.LegacyImageViewer2DUIApplicationSettings

setZoomDynamicSpeed(double) - Method in class org.hkijena.jipipe.plugins.imageviewer.settings.LegacyImageViewer2DUIApplicationSettings

setZoomedHitArea(Rectangle) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUIActiveArea

setzOrder(int) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode

setzOrder(int) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DerivativesFeaturesAlgorithm

shallowClone() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Creates a shallow copy of this list

shallowCopy() - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

shallowCopy() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

Returns a shallow copy (the vertices and edges are not copied)

shallowCopy() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

SHAPE - Static variable in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.ThumbRenderer

SHAPE - Static variable in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI.ThumbRenderer

ShapeImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.data.input

Handling of Shape

ShapeImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.data.input.ShapeImageJ2ModuleInput

ShapeParameters() - Constructor for class org.hkijena.jipipe.plugins.graphannotation.nodes.TextBoxAnnotationGraphNode.ShapeParameters

ShapeParameters(TextBoxAnnotationGraphNode.ShapeParameters) - Constructor for class org.hkijena.jipipe.plugins.graphannotation.nodes.TextBoxAnnotationGraphNode.ShapeParameters

ShortArrayParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays

ShortArrayParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.ShortArrayParameterImageJ2ModuleInput

ShortConstantValueImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant

ShortConstantValueImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.ShortConstantValueImageJ2OutOfBoundsFactoryData

ShortConstantValueImageJ2OutOfBoundsFactoryData(OutOfBoundsConstantValueFactory<?, ?>) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.ShortConstantValueImageJ2OutOfBoundsFactoryData

ShortConstantValueImageJ2OutOfBoundsFactoryData(ShortConstantValueImageJ2OutOfBoundsFactoryData) - Constructor for class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.ShortConstantValueImageJ2OutOfBoundsFactoryData

ShortParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives

ShortParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.ShortParameterImageJ2ModuleInput

ShortParameterImageJ2ModuleOutput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives

ShortParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.ShortParameterImageJ2ModuleOutput

ShortParameterTypeInfo - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Info for Short

ShortParameterTypeInfo() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.ShortParameterTypeInfo

ShortPrimitiveParameterTypeInfo - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Info for Short

ShortPrimitiveParameterTypeInfo() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.ShortPrimitiveParameterTypeInfo

shouldDraw(Object, Object) - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIElementDrawingMode

shouldFillGap(int, int, int, int) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

shouldHandleQuoting() - Static method in class org.hkijena.jipipe.utils.ProcessUtils

Test for handling quoting in addArgument

shouldPadTabRun(int, int) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

shouldRefreshToCache() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataDisplayCacheControl

shouldRotateTabRuns(int, int) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

show(JIPipeDataSlot, JIPipeDataTableRowInfo, String, Path, String, String, String, JIPipeDesktopWorkbench, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation

show(JIPipeDataSlot, JIPipeDataTableRowInfo, String, Path, String, String, String, JIPipeDesktopWorkbench, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.data.JIPipeLegacyDataImportOperation

Imports the data and shows it

show(JIPipeDesktopWorkbench) - Static method in class org.hkijena.jipipe.desktop.app.plugins.artifactsmanager.JIPipeDesktopArtifactManagerUI

show(JIPipeDesktopWorkbench) - Static method in class org.hkijena.jipipe.desktop.app.plugins.pluginsmanager.JIPipeDesktopPluginManagerUI

show(JIPipeDataSlot, JIPipeDataTableRowInfo, String, Path, String, String, String, JIPipeDesktopWorkbench, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.core.data.CopyContainingFolderDataImportOperation

show(JIPipeDataSlot, JIPipeDataTableRowInfo, String, Path, String, String, String, JIPipeDesktopWorkbench, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.core.data.OpenContainingFolderDataImportOperation

show(JIPipeDataSlot, JIPipeDataTableRowInfo, String, Path, String, String, String, JIPipeDesktopWorkbench, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.core.data.OpenInNativeApplicationDataImportOperation

showConfirmDialog(Component, String, Dimension, Component) - Static method in class org.hkijena.jipipe.utils.UIUtils

showConnectionErrorMessage(Component, JIPipeDataSlot, JIPipeDataSlot) - Static method in class org.hkijena.jipipe.utils.UIUtils

showContent(MarkdownText) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormHelpPanel

showContent(String, MarkdownText) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormHelpPanel

showDefaultContent() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormHelpPanel

showDialog(JIPipeDesktopWorkbench, Path, Set<JIPipeDependency>) - Static method in class org.hkijena.jipipe.desktop.app.project.JIPipeDesktopInvalidProjectDependenciesInfoDialog

Shows the dialog

showDialog(Component, JIPipeWorkbench, String, HTMLText, Path, PathIOMode, PathType, boolean, FileNameExtensionFilter...) - Static method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNext

showDialog(Component, JIPipeHistoryJournal, JIPipeGraphNode, JIPipeSlotType) - Static method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddAlgorithmSlotPanel

Shows a dialog for adding slots

showDialog(JIPipeDesktopWorkbench, Component, JIPipeDynamicParameterCollection) - Static method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAddParameterDialog

Shows a dialog for adding slots

showDialog(Component, String) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

showDialog(Component, JIPipeHistoryJournal, JIPipeDataSlot) - Static method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopEditAlgorithmSlotPanel

Shows a dialog for adding slots

showDialog(Component, JIPipeDesktopFormPanel, String) - Static method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Shows a parameter collection inside a modal dialog

showDialog(JIPipeDesktopWorkbench, JIPipeParameterCollection, MarkdownText, String, int) - Static method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

Shows a parameter collection inside a modal dialog

showDialog(JIPipeDesktopWorkbench, Component, JIPipeParameterCollection, MarkdownText, String, int) - Static method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

Shows a parameter collection inside a modal dialog

showDialog(Component, DynamicEnumParameter<T>, Object, String) - Static method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPickDynamicEnumValueDialog

showDialog(Component, List<?>, EnumItemInfo, Object, String) - Static method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopPickEnumValueDialog

showDialog(MarkdownText, boolean, String, Component, boolean) - Static method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopMarkdownReader

showDialog(Component, JIPipeDesktopDataTypePicker.Mode, Set<JIPipeDataInfo>) - Static method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker

Shows a dialog to data types

showDialog(Component, String, Set<String>) - Static method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopIconPickerDialog

Picks an icon name using a dialog

showDialog(Component, JIPipeDesktopNodeInfoPicker.Mode, Set<JIPipeNodeInfo>) - Static method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker

Shows a dialog to pick nodes

showDialog() - Method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopPickerDialog

showDialog(Component, Set<JIPipeGraphNode>, JIPipeGraphNode, String) - Static method in class org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopPickNodeDialog

Shows a dialog for selecting an algorithm

showDialog(Component) - Static method in class org.hkijena.jipipe.plugins.expressions.FunctionSelectorList

showDialog(Component, ExpressionEvaluator) - Static method in class org.hkijena.jipipe.plugins.expressions.OperatorSelectorList

showDialog(Component, JIPipeDesktopWorkbench, String, Set<JIPipeExpressionParameterVariableInfo>) - Static method in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderUI

showDialog(Component, Set<JIPipeExpressionParameterVariableInfo>) - Static method in class org.hkijena.jipipe.plugins.expressions.VariableSelectorList

showDialog(Component, String, Component, String, Dimension) - Static method in class org.hkijena.jipipe.utils.OKCancelDialog

showDialogSingle(Component, JIPipeWorkbench, String, HTMLText, Path, PathIOMode, PathType, FileNameExtensionFilter...) - Static method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNext

showDocumentation(MarkdownText) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

showError(JIPipeDesktopDockPanel, String, String) - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewer

showErrorDialog(String, String) - Method in interface org.hkijena.jipipe.api.JIPipeWorkbench

Shows an error dialog

showErrorDialog(String, String) - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

showErrorDialog(String, String) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

showErrorDialog(String, String) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDummyWorkbench

showErrorDialog(JIPipeDesktopWorkbench, Component, Throwable) - Static method in class org.hkijena.jipipe.utils.UIUtils

Opens a dialog showing an exception

showErrorUI() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopLegacyCacheDataViewerWindow

Instruction to add the error UI By default, it will update the standard error label and revalidate the toolbar

showErrorUI() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.algorithms.TrackmateLegacyCacheDataViewerWindow

showErrorUI() - Method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersLegacyDataViewerWindow

showErrorUI() - Method in class org.hkijena.jipipe.plugins.strings.TextLegacyCacheDataViewerWindow

showErrorUI() - Method in class org.hkijena.jipipe.plugins.tables.display.TableViewerLegacyCacheDataViewerWindow

showGuides() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.FloodFillMaskDrawer2DTool

showGuides() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawer2DTool

showGuides() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MouseMaskDrawer2DTool

showHelp() - Static method in class org.hkijena.jipipe.cli.JIPipeCLIHelp

showInCompartmentGraph() - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeUIContextAction

Determines if the item is displayed in the compartment graph.

showInGraphCompartment() - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeUIContextAction

Determines if the item is displayed in the graph compartment (project/group/extension editor).

showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.InvertSelectionNodeUIContextAction

showInMultiSelectionPanel() - Method in interface org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.NodeUIContextAction

Deprecated.

the multi selection panel was removed

showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.SelectAllNodeUIContextAction

showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsCopyNodeUIContextAction

showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsCutNodeUIContextAction

showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.contextmenu.JIPipeDesktopCompartmentsPasteNodeUIContextAction

showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphCopyNodeUIContextAction

showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphCutNodeUIContextAction

showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphDuplicateNodeUIContextAction

showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction

showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.contextmenu.AlgorithmGraphPasteNodeUIContextAction

showLog(JIPipeRunnableLogEntry) - Method in class org.hkijena.jipipe.desktop.app.running.logs.JIPipeDesktopLogViewer

showMessageDialog(String, String) - Method in interface org.hkijena.jipipe.api.JIPipeWorkbench

Shows a message dialog

showMessageDialog(String, String) - Method in class org.hkijena.jipipe.desktop.app.compat.JIPipeDesktopRunSingleAlgorithmWindow

showMessageDialog(String, String) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

showMessageDialog(String, String) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDummyWorkbench

showMissingAuthorBalloon() - Method in class org.hkijena.jipipe.desktop.app.components.JIPipeDesktopAuthorProfileButton

showOKCancelDialog(Component, Component, String) - Static method in class org.hkijena.jipipe.utils.UIUtils

Shows a component in a JIPipe-styled dialog with OK and Cancel button

showOpenDialog(Component) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

showPathChooser(Component, JIPipeWorkbench, String, PathType, FileNameExtensionFilter...) - Static method in class org.hkijena.jipipe.plugins.expressions.DataExportExpressionParameter

showPickerDialog(Component, JIPipeParameterTree, String) - Static method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterAccessTreeUI

Picks a node or parameter

showPickerDialog(Component, String, Set<JIPipeGraphNode>, Object) - Static method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterKeyPickerUI

Picks a node or parameter

showResults() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphEditorRunManager

showResults() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.actions.JIPipeDesktopCompartmentsGraphEditorRunManager

showResults() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.actions.JIPipeDesktopPipelineGraphEditorRunManager

showResults(List<JIPipeAlgorithm>) - Method in class org.hkijena.jipipe.desktop.app.settings.JIPipeDesktopProjectOverviewUI

showSaveDialog(Component) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser

showSlide(String) - Method in class org.hkijena.jipipe.utils.ui.DotSlideshow

showSplash(Context) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopSplashScreen

ShowTrackSchemeDataDisplayOperation - Class in org.hkijena.jipipe.plugins.ijtrackmate.display.trackscheme

ShowTrackSchemeDataDisplayOperation() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.display.trackscheme.ShowTrackSchemeDataDisplayOperation

showValidityReportDialog(JIPipeDesktopWorkbench, Component, JIPipeValidationReport, String, String, boolean) - Static method in class org.hkijena.jipipe.utils.UIUtils

Opens a dialog showing a validity report

shutdown() - Method in class org.hkijena.jipipe.api.JIPipeFixedThreadPool

Forces the thread pool to shut down

shutdown() - Method in class org.hkijena.jipipe.utils.debounce.ConsumingDynamicDebouncer

shutdown() - Method in class org.hkijena.jipipe.utils.debounce.DynamicDebouncer

SIFTParameters - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple

Wrapper around FloatArray2DSIFT params

SIFTParameters() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SIFTParameters

SIFTParameters(SIFTParameters) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SIFTParameters

SignColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a floor function

SignColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.SignColumnOperation

signed - Variable in enum org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetType

true for integral signed types and floats, false for unsigned integral types.

SILENT - Static variable in class org.hkijena.jipipe.api.JIPipeProgressInfo

SimpleBUnwarpJParameters - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple

Reduced parameter set for SimpleImageRegistrationAlgorithm (no shear, scale, anisotropy correction)

SimpleBUnwarpJParameters() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

SimpleBUnwarpJParameters(SimpleBUnwarpJParameters) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

SimpleFileAnnotationGenerator - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Generates annotations from filenames

SimpleFileAnnotationGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimpleFileAnnotationGenerator

New instance

SimpleFileAnnotationGenerator(SimpleFileAnnotationGenerator) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimpleFileAnnotationGenerator

Copies the algorithm

SimpleFolderAnnotationGenerator - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Algorithm that generates annotations from folder names

SimpleFolderAnnotationGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimpleFolderAnnotationGenerator

Creates a new instance

SimpleFolderAnnotationGenerator(SimpleFolderAnnotationGenerator) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimpleFolderAnnotationGenerator

Copies the algorithm

SimpleFormGeneratorAlgorithm - Class in org.hkijena.jipipe.plugins.forms.algorithms

SimpleFormGeneratorAlgorithm(JIPipeNodeInfo, FormData) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.SimpleFormGeneratorAlgorithm

Constructor for a new instance

SimpleFormGeneratorAlgorithm(SimpleFormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.SimpleFormGeneratorAlgorithm

SimpleImageAndRoiIteratingAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

Image processor algorithm that optionally takes a ROI

SimpleImageAndRoiIteratingAlgorithm(JIPipeNodeInfo, Class<? extends ImagePlusData>, Class<? extends ImagePlusData>) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.SimpleImageAndRoiIteratingAlgorithm

SimpleImageAndRoiIteratingAlgorithm(SimpleImageAndRoiIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.SimpleImageAndRoiIteratingAlgorithm

SimpleImageRegistrationAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple

Port of Register_Virtual_Stack_MT

SimpleImageRegistrationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationAlgorithm

SimpleImageRegistrationAlgorithm(SimpleImageRegistrationAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationAlgorithm

SimpleImageRegistrationFeatureModel - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple

Feature extraction model for the registration nodes

SimpleImageRegistrationModel - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple

Feature extraction model for the registration nodes

SimpleImageRegistrationParameters - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple

SimpleImageRegistrationParameters() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationParameters

SimpleImageRegistrationParameters(SimpleImageRegistrationParameters) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationParameters

SimpleIteratingFormProcessorAlgorithm - Class in org.hkijena.jipipe.plugins.forms.algorithms

SimpleIteratingFormProcessorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.SimpleIteratingFormProcessorAlgorithm

SimpleIteratingFormProcessorAlgorithm(SimpleIteratingFormProcessorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.SimpleIteratingFormProcessorAlgorithm

SimpleIteratingJythonScriptAlgorithm - Class in org.hkijena.jipipe.plugins.python.algorithms.jython

An algorithm that allows to run Python code

SimpleIteratingJythonScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.python.algorithms.jython.SimpleIteratingJythonScriptAlgorithm

Creates a new instance

SimpleIteratingJythonScriptAlgorithm(SimpleIteratingJythonScriptAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.python.algorithms.jython.SimpleIteratingJythonScriptAlgorithm

Creates a copy

simpleOMEExport(ImagePlus, Path) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.OMEImageData

Copy of the run method in loci.plugins.out.Exporter, as the plugin code really depends on some UI interaction We also simplified the code, as JIPipe outputs very standard files

simpleOMEImport(Path) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.OMEImageData

SimplePathAnnotationGenerator - Class in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Algorithm that generates annotations from folder names

SimplePathAnnotationGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimplePathAnnotationGenerator

Creates a new instance

SimplePathAnnotationGenerator(SimplePathAnnotationGenerator) - Constructor for class org.hkijena.jipipe.plugins.filesystem.algorithms.local.SimplePathAnnotationGenerator

Copies the algorithm

SimpleRegistrationUtils - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

Port of Register_Virtual_Stack_MT

simplify() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

Simplifies the graph by only keeping (degree 0 or 1) and branching points (degree more than 2).

simplifyAndMinimize(Set<JIPipeDependency>, boolean) - Static method in interface org.hkijena.jipipe.JIPipeDependency

Flattens the hierarchy of dependencies into a list and removes large metadata (e.g. thumbnails)

SimplifyAnnotationsAlgorithm - Class in org.hkijena.jipipe.plugins.annotation.algorithms

SimplifyAnnotationsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.SimplifyAnnotationsAlgorithm

SimplifyAnnotationsAlgorithm(SimplifyAnnotationsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.SimplifyAnnotationsAlgorithm

SimplifyAnnotationsAlgorithm.AnnotationRemovalMode - Enum in org.hkijena.jipipe.plugins.annotation.algorithms

SimplifyFilamentsAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.process

SimplifyFilamentsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.SimplifyFilamentsAlgorithm

SimplifyFilamentsAlgorithm(SimplifyFilamentsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.SimplifyFilamentsAlgorithm

SineColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a sine function

SineColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.SineColumnOperation

SingleAnnotationIOSettings - Class in org.hkijena.jipipe.plugins.forms.utils

Settings group for single annotation I/O

SingleAnnotationIOSettings() - Constructor for class org.hkijena.jipipe.plugins.forms.utils.SingleAnnotationIOSettings

SingleAnnotationIOSettings(SingleAnnotationIOSettings) - Constructor for class org.hkijena.jipipe.plugins.forms.utils.SingleAnnotationIOSettings

SingleExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.expressions

JIPipeExpressionVariablesInfo that contains exactly one variable.

SingleExpressionParameterVariablesInfo(String, String, String) - Constructor for class org.hkijena.jipipe.plugins.expressions.SingleExpressionParameterVariablesInfo

SingleExpressionParameterVariablesInfo(JIPipeExpressionParameterVariableInfo) - Constructor for class org.hkijena.jipipe.plugins.expressions.SingleExpressionParameterVariablesInfo

SINGLEIMAGE - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageScienceUtils

SingleImageJAlgorithmRunConfiguration - Class in org.hkijena.jipipe.api.compat

Manages a single algorithm run

SingleImageJAlgorithmRunConfiguration(String, String, String, String, int) - Constructor for class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration

SingleImageJAlgorithmRunConfiguration(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration

SingleIterationStepCheckerAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps

SingleIterationStepCheckerAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm

SingleIterationStepCheckerAlgorithm(SingleIterationStepCheckerAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm

SingletonTab(Icon, JIPipeDesktopTabPane.CloseMode, Supplier<Component>, String) - Constructor for class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.SingletonTab

size() - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache

size() - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache

size() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

size() - Method in class org.hkijena.jipipe.api.nodes.database.WeightedTokens

size() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

The size of the queue (includes the currently running JIPipeGraphRun

size() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration

size - Variable in enum org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetType

Element size in bytes.

size() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.LUTData

SIZE - Static variable in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.ThumbRenderer

SIZE - Static variable in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI.ThumbRenderer

size() - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

SizeFitMode - Enum in org.hkijena.jipipe.utils

SKELETONS_TABLE_OUTPUT_SLOT - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm

SkeletonToFilaments2DAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.generate

SkeletonToFilaments2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.SkeletonToFilaments2DAlgorithm

SkeletonToFilaments2DAlgorithm(SkeletonToFilaments2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.SkeletonToFilaments2DAlgorithm

SkeletonToFilaments3DAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.generate

SkeletonToFilaments3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.SkeletonToFilaments3DAlgorithm

SkeletonToFilaments3DAlgorithm(SkeletonToFilaments3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.SkeletonToFilaments3DAlgorithm

SkeletonToSimplifiedFilamentsFijiAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.generate

SkeletonToSimplifiedFilamentsFijiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.SkeletonToSimplifiedFilamentsFijiAlgorithm

SkeletonToSimplifiedFilamentsFijiAlgorithm(SkeletonToSimplifiedFilamentsFijiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.SkeletonToSimplifiedFilamentsFijiAlgorithm

SleepAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms

SleepAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.SleepAlgorithm

SleepAlgorithm(SleepAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.SleepAlgorithm

slice(Collection<Integer>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Creates a new instance that contains only the selected rows.

SliceAfterFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

SliceAfterFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.SliceAfterFunction

SliceBeforeFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

SliceBeforeFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.SliceBeforeFunction

SliceFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

SliceFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.SliceFunction

SliceROIListAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter

Wrapper around RoiManager

SliceROIListAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.SliceROIListAlgorithm

Instantiates a new node type.

SliceROIListAlgorithm(SliceROIListAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.SliceROIListAlgorithm

Instantiates a new node type.

SliceTableRowsAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.filter

SliceTableRowsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.filter.SliceTableRowsAlgorithm

SliceTableRowsAlgorithm(SliceTableRowsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.filter.SliceTableRowsAlgorithm

SLOT_FORMS - Static variable in class org.hkijena.jipipe.plugins.forms.algorithms.IteratingFormProcessorAlgorithm

SLOT_INPUT_MASK - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

SLOT_INPUT_ROI - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

SLOT_OUTPUT_WARNINGS - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization.Coloc2Node

SLOT_PARAMETERS - Static variable in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

SlotConfigurationChangedEvent(JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.data.JIPipeSlotConfiguration.SlotConfigurationChangedEvent

Creates a new instance

SlotConfigurationChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.data.JIPipeSlotConfiguration.SlotConfigurationChangedEventEmitter

SlotMapParameterCollection - Class in org.hkijena.jipipe.plugins.parameters.api.graph

Parameter that holds a value for each data slot

SlotMapParameterCollection(Class<?>, JIPipeGraphNode, Function<JIPipeDataSlotInfo, Object>, boolean) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.graph.SlotMapParameterCollection

Creates a new instance

smooth(double, double, double, boolean, JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

SmoothFilamentsAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.process

SmoothFilamentsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.SmoothFilamentsAlgorithm

SmoothFilamentsAlgorithm(SmoothFilamentsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.process.SmoothFilamentsAlgorithm

snapshot(String, String, UUID, Icon) - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal

Snapshot(JIPipeDedicatedGraphHistoryJournal, LocalDateTime, String, String, Icon, JIPipeGraph) - Constructor for class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal.Snapshot

snapshot(String, String, UUID, Icon) - Method in class org.hkijena.jipipe.api.history.JIPipeDummyGraphHistoryJournal

snapshot(String, String, UUID, Icon) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Creates a new snapshot in the history journal

snapshot(String, String, UUID, Icon) - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal

Snapshot(JIPipeProjectHistoryJournal, LocalDateTime, String, String, Icon, JIPipeGraph, JIPipeGraph) - Constructor for class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal.Snapshot

snapshotBeforeAddCompartment(String) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Create a snapshot for adding a node

snapshotBeforeAddNode(JIPipeGraphNode, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Create a snapshot for adding a node

snapshotBeforeAddNodes(Collection<JIPipeGraphNode>, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Create a snapshot for adding a node

snapshotBeforeAddSlot(JIPipeGraphNode, JIPipeDataSlotInfo, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Snapshot before adding a slot

snapshotBeforeConnect(JIPipeDataSlot, JIPipeDataSlot, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Snapshot before connecting two slots

snapshotBeforeCutCompartment(JIPipeProjectCompartment) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Snapshot before cutting a compartment

snapshotBeforeCutNodes(Set<JIPipeGraphNode>, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Snapshot before cutting a compartment

snapshotBeforeDisconnect(JIPipeDataSlot, JIPipeDataSlot, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Snapshot before disconnecting two slots

snapshotBeforeDisconnectAll(JIPipeDataSlot, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Snapshot before disconnecting two slots

snapshotBeforeEditSlot(JIPipeDataSlot, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Create snapshot before a slot edit

snapshotBeforeLabelSlot(JIPipeDataSlot, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Snapshot before adding a slot

snapshotBeforeMoveNodes(Set<JIPipeGraphNode>, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Create a snapshot for moving nodes

snapshotBeforeMoveSlot(JIPipeDataSlot, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Snapshot before adding a slot

snapshotBeforePasteNodes(Collection<JIPipeGraphNode>, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Create a snapshot for adding a node

snapshotBeforeRemoveCompartment(JIPipeProjectCompartment) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Create a snapshot for removing a node

snapshotBeforeRemoveNode(JIPipeGraphNode, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Create a snapshot for removing a node

snapshotBeforeRemoveNodes(Collection<JIPipeGraphNode>, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Create a snapshot for adding a node

snapshotBeforeRemoveSlot(JIPipeGraphNode, JIPipeDataSlotInfo, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Snapshot before adding a slot

SobelEdgeDetectorAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge

Wrapper around ImageProcessor

SobelEdgeDetectorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.SobelEdgeDetectorAlgorithm

Instantiates a new node type.

SobelEdgeDetectorAlgorithm(SobelEdgeDetectorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.SobelEdgeDetectorAlgorithm

Instantiates a new node type.

softClear(UUID, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache

Removes the cached data of a node without modifying the internal structure Remove outdated will be able to remove these

SolidColorIcon - Class in org.hkijena.jipipe.desktop.commons.components.icons

Icon that is only one specific color, including border

SolidColorIcon() - Constructor for class org.hkijena.jipipe.desktop.commons.components.icons.SolidColorIcon

Creates a 16x16 black icon

SolidColorIcon(int, int) - Constructor for class org.hkijena.jipipe.desktop.commons.components.icons.SolidColorIcon

Creates a black icon

SolidColorIcon(int, int, Color) - Constructor for class org.hkijena.jipipe.desktop.commons.components.icons.SolidColorIcon

Creates an icon with black borders

SolidColorIcon(int, int, Color, Color) - Constructor for class org.hkijena.jipipe.desktop.commons.components.icons.SolidColorIcon

SortAndExtractRoiByStatisticsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort

Deprecated.

SortAndExtractRoiByStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm

Deprecated.

Instantiates a new node type.

SortAndExtractRoiByStatisticsAlgorithm(SortAndExtractRoiByStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm

Deprecated.

Instantiates a new node type.

SortAndExtractRoiByStatisticsAlgorithm2 - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort

Wrapper around RoiManager

SortAndExtractRoiByStatisticsAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2

Instantiates a new node type.

SortAndExtractRoiByStatisticsAlgorithm2(SortAndExtractRoiByStatisticsAlgorithm2) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2

Instantiates a new node type.

SortAscendingArrayFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

SortAscendingArrayFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.SortAscendingArrayFunction

SortAscendingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Sorts the items ascending

SortAscendingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.SortAscendingColumnOperation

SortDescendingArrayFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

SortDescendingArrayFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.SortDescendingArrayFunction

SortDescendingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Sorts the items ascending

SortDescendingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.SortDescendingColumnOperation

sortDown(JIPipeProjectRunSet) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectRunSetsConfiguration

SortEntry() - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.SortRowsByExpressionAlgorithm.SortEntry

SortEntry(SortRowsByExpressionAlgorithm.SortEntry) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.SortRowsByExpressionAlgorithm.SortEntry

SortOrder - Enum in org.hkijena.jipipe.plugins.parameters.library.util

Sort orders

SortRoiListByExpressionsAndMeasurementsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort

SortRoiListByExpressionsAndMeasurementsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm

SortRoiListByExpressionsAndMeasurementsAlgorithm(SortRoiListByExpressionsAndMeasurementsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm

SortRoiListByExpressionsAndMeasurementsAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort

SortRowsByAnnotationsAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms

SortRowsByAnnotationsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.SortRowsByAnnotationsAlgorithm

SortRowsByAnnotationsAlgorithm(SortRowsByAnnotationsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.SortRowsByAnnotationsAlgorithm

SortRowsByExpressionAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms

SortRowsByExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.SortRowsByExpressionAlgorithm

SortRowsByExpressionAlgorithm(SortRowsByExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.SortRowsByExpressionAlgorithm

SortRowsByExpressionAlgorithm.SortEntry - Class in org.hkijena.jipipe.plugins.utils.algorithms

SortTableColumnsAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.columns

Algorithm that integrates columns

SortTableColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.SortTableColumnsAlgorithm

Creates a new instance

SortTableColumnsAlgorithm(SortTableColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.columns.SortTableColumnsAlgorithm

Creates a copy

SortTableRowsAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.rows

Algorithm that integrates columns

SortTableRowsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.rows.SortTableRowsAlgorithm

Creates a new instance

SortTableRowsAlgorithm(SortTableRowsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.rows.SortTableRowsAlgorithm

Creates a copy

sortUp(JIPipeProjectRunSet) - Method in class org.hkijena.jipipe.api.project.JIPipeProjectRunSetsConfiguration

SOURCE_EXTENSION - Static variable in class org.hkijena.jipipe.api.JIPipeNodeTemplate

SOURCE_USER - Static variable in class org.hkijena.jipipe.api.JIPipeNodeTemplate

SourceWrapMode - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.parameters

spatialBlurLinear(BufferedImage, Point, Point, double) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils

SpinnerIcon - Class in org.hkijena.jipipe.desktop.commons.components.icons

SpinnerIcon(Component) - Constructor for class org.hkijena.jipipe.desktop.commons.components.icons.SpinnerIcon

splitAll() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Splits all ShapeRoi that consist of multiple sub-Roi into their individual sub-Roi.

splitBy(TableColumnData) - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Splits this table into multiple tables according to an internal or external column

SplitByAnnotation - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Algorithm that splits the input data by a specified annotation

SplitByAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.SplitByAnnotation

SplitByAnnotation(SplitByAnnotation) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.SplitByAnnotation

Copies the algorithm

SplitByAnnotationScript - Class in org.hkijena.jipipe.plugins.annotation.algorithms

Algorithm that annotates all data with the same annotation

SplitByAnnotationScript(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.SplitByAnnotationScript

SplitByAnnotationScript(SplitByAnnotationScript) - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.SplitByAnnotationScript

Copies the algorithm

SplitByDimensionAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

SplitByDimensionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm

SplitByDimensionAlgorithm(SplitByDimensionAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm

SplitChannelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

Deprecated.

SplitChannelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsAlgorithm

Deprecated.

Instantiates a new node type.

SplitChannelsAlgorithm(SplitChannelsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsAlgorithm

Deprecated.

Creates a copy

SplitChannelsByTableAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

Wrapper around ChannelSplitter

SplitChannelsByTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

Instantiates a new node type.

SplitChannelsByTableAlgorithm(SplitChannelsByTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

Creates a copy

SplitFilamentsIntoConnectedComponentsAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.split

SplitFilamentsIntoConnectedComponentsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.split.SplitFilamentsIntoConnectedComponentsAlgorithm

SplitFilamentsIntoConnectedComponentsAlgorithm(SplitFilamentsIntoConnectedComponentsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.split.SplitFilamentsIntoConnectedComponentsAlgorithm

SplitFilamentsIntoCyclesAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.split

SplitFilamentsIntoCyclesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.split.SplitFilamentsIntoCyclesAlgorithm

SplitFilamentsIntoCyclesAlgorithm(SplitFilamentsIntoCyclesAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.split.SplitFilamentsIntoCyclesAlgorithm

SplitImpAlphaChannelAlgorithm - Class in org.hkijena.jipipe.plugins.imp.nodes

SplitImpAlphaChannelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imp.nodes.SplitImpAlphaChannelAlgorithm

SplitImpAlphaChannelAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imp.nodes.SplitImpAlphaChannelAlgorithm

splitIntoSlices(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

SplitLabelsConnectedComponents2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

SplitLabelsConnectedComponents2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.SplitLabelsConnectedComponents2DAlgorithm

SplitLabelsConnectedComponents2DAlgorithm(SplitLabelsConnectedComponents2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.SplitLabelsConnectedComponents2DAlgorithm

splitNonRegex(String, String) - Static method in class org.hkijena.jipipe.utils.StringUtils

SplitRGBChannelsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

SplitRGBChannelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitRGBChannelsAlgorithm

SplitRGBChannelsAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitRGBChannelsAlgorithm

SplitRoi3DIntoConnectedComponentsAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split

SplitRoi3DIntoConnectedComponentsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

SplitRoi3DIntoConnectedComponentsAlgorithm(SplitRoi3DIntoConnectedComponentsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm

SplitRoiAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split

Wrapper around RoiManager

SplitRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiAlgorithm

Instantiates a new node type.

SplitRoiAlgorithm(SplitRoiAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiAlgorithm

Instantiates a new node type.

SplitRoiConnectedComponentsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split

SplitRoiConnectedComponentsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

SplitRoiConnectedComponentsAlgorithm(SplitRoiConnectedComponentsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm

SplitRoiConnectedComponentsAlgorithm.DimensionOperation - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split

SplitRoiConnectedComponentsAlgorithm.GraphPostprocessingVariables - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split

SplitSpotsNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots

SplitSpotsNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SplitSpotsNode

SplitSpotsNode(SplitSpotsNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SplitSpotsNode

SplitTableByColumnsAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.split

Algorithm that integrates columns

SplitTableByColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableByColumnsAlgorithm

Creates a new instance

SplitTableByColumnsAlgorithm(SplitTableByColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableByColumnsAlgorithm

Creates a copy

SplitTableIntoColumnsAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.split

Algorithm that integrates columns

SplitTableIntoColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableIntoColumnsAlgorithm

Creates a new instance

SplitTableIntoColumnsAlgorithm(SplitTableIntoColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableIntoColumnsAlgorithm

Creates a copy

SplitTableIntoRowsAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.split

Algorithm that integrates columns

SplitTableIntoRowsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableIntoRowsAlgorithm

Creates a new instance

SplitTableIntoRowsAlgorithm(SplitTableIntoRowsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.split.SplitTableIntoRowsAlgorithm

Creates a copy

SplitTracksNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks

SplitTracksNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.SplitTracksNode

SplitTracksNode(SplitTracksNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.SplitTracksNode

SPOT_DETECTORS - Static variable in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackMateUtils

SPOT_TRACKERS - Static variable in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackMateUtils

SpotDetectorData - Class in org.hkijena.jipipe.plugins.ijtrackmate.datatypes

SpotDetectorData(SpotDetectorFactory<?>, Map<String, Object>) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotDetectorData

SpotDetectorData(SpotDetectorData) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotDetectorData

SpotDetectorNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots

SpotDetectorNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SpotDetectorNode

SpotDetectorNode(SpotDetectorNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SpotDetectorNode

SpotDrawer - Class in org.hkijena.jipipe.plugins.ijtrackmate.utils

SpotDrawer() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer

SpotDrawer(SpotDrawer) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotDrawer

SpotDrawer.LabelSettings - Class in org.hkijena.jipipe.plugins.ijtrackmate.utils

SpotFeature - Class in org.hkijena.jipipe.plugins.ijtrackmate.parameters

SpotFeature() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeature

SpotFeature(SpotFeature) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeature

SpotFeature(String) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeature

SpotFeature.Deserializer - Class in org.hkijena.jipipe.plugins.ijtrackmate.parameters

SpotFeatureFilterParameter - Class in org.hkijena.jipipe.plugins.ijtrackmate.parameters

SpotFeatureFilterParameter() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeatureFilterParameter

SpotFeatureFilterParameter(SpotFeature, double, boolean) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeatureFilterParameter

SpotFeatureFilterParameter(SpotFeatureFilterParameter) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeatureFilterParameter

SpotFeatureFilterParameter.List - Class in org.hkijena.jipipe.plugins.ijtrackmate.parameters

SpotFeaturePenaltyParameter - Class in org.hkijena.jipipe.plugins.ijtrackmate.parameters

SpotFeaturePenaltyParameter() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeaturePenaltyParameter

SpotFeaturePenaltyParameter(SpotFeature, double) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeaturePenaltyParameter

SpotFeaturePenaltyParameter(SpotFeaturePenaltyParameter) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeaturePenaltyParameter

SpotFeaturePenaltyParameter.List - Class in org.hkijena.jipipe.plugins.ijtrackmate.parameters

SpotFeaturePenaltyParameterListSettingsIO - Class in org.hkijena.jipipe.plugins.ijtrackmate.io

Maps a Map(String, Double) to a list of SpotFeaturePenaltyParameter

SpotFeaturePenaltyParameterListSettingsIO() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.io.SpotFeaturePenaltyParameterListSettingsIO

SpotFeatureVariablesInfo - Class in org.hkijena.jipipe.plugins.ijtrackmate.utils

SpotFeatureVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotFeatureVariablesInfo

SpotFilterNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots

SpotFilterNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SpotFilterNode

SpotFilterNode(SpotFilterNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SpotFilterNode

spotKeyToVariable(String) - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackSpotFeatureVariablesInfo

SpotListCellRenderer - Class in org.hkijena.jipipe.plugins.ijtrackmate.display.spots

SpotListCellRenderer(SpotsManagerPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotListCellRenderer

SpotsCollectionData - Class in org.hkijena.jipipe.plugins.ijtrackmate.datatypes

SpotsCollectionData(Model, Settings, ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotsCollectionData

SpotsCollectionData(ModelData) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotsCollectionData

SpotSegmentation3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.segmentation

SpotSegmentation3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm

SpotSegmentation3DAlgorithm(SpotSegmentation3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm

SpotSegmentation3DAlgorithm.SpotSegmentationMethod - Enum in org.hkijena.jipipe.plugins.ij3d.nodes.segmentation

SpotSegmentation3DAlgorithm.SpotSegmentationSettings - Class in org.hkijena.jipipe.plugins.ij3d.nodes.segmentation

SpotSegmentationSettings() - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm.SpotSegmentationSettings

SpotSegmentationSettings(SpotSegmentation3DAlgorithm.SpotSegmentationSettings) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm.SpotSegmentationSettings

SpotsManagerPlugin2D - Class in org.hkijena.jipipe.plugins.ijtrackmate.display.spots

SpotsManagerPlugin2D(JIPipeDesktopLegacyImageViewer) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotsManagerPlugin2D

SpotsManagerPlugin2D.SelectionContextPanel - Class in org.hkijena.jipipe.plugins.ijtrackmate.display.spots

SpotsManagerPlugin2D.SelectionInfoContextPanel - Class in org.hkijena.jipipe.plugins.ijtrackmate.display.spots

SpotsToRGBNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots

SpotsToRGBNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SpotsToRGBNode

SpotsToRGBNode(SpotsToRGBNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SpotsToRGBNode

SpotsToRoiConverter - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters

SpotsToRoiConverter() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.SpotsToRoiConverter

spotsToROIList() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotsCollectionData

spotsToROIList(SpotsCollectionData, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode

SpotTrackerData - Class in org.hkijena.jipipe.plugins.ijtrackmate.datatypes

SpotTrackerData(SpotTrackerFactory, Map<String, Object>) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotTrackerData

SpotTrackerData(SpotTrackerData) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotTrackerData

spotVariableToKey(String) - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackSpotFeatureVariablesInfo

SqrtColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a square root function

SqrtColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.SqrtColumnOperation

SquareColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a square function

SquareColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.SquareColumnOperation

Stack2DExporterRun - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.runs

Stack2DExporterRun(JIPipeDesktopLegacyImageViewer, Path, String, String) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Stack2DExporterRun

Stack2DRendererRun - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.runs

Stack2DRendererRun(JIPipeDesktopLegacyImageViewer, String, Consumer<ImagePlus>) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Stack2DRendererRun

Stack2DRendererRun(JIPipeDesktopLegacyImageViewer, String, double, Consumer<ImagePlus>) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Stack2DRendererRun

StackCombinerAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

StackCombinerAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackCombinerAlgorithm

StackCombinerAlgorithm(StackCombinerAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackCombinerAlgorithm

StackedBarCategoryJFreeChartPlotData - Class in org.hkijena.jipipe.plugins.plots.datatypes

A stacked bar plot Series table columns: Value (Double), Category (String), Group (String) Multiple series: No

StackedBarCategoryJFreeChartPlotData() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.StackedBarCategoryJFreeChartPlotData

Creates a new instance

StackedBarCategoryJFreeChartPlotData(StackedBarCategoryJFreeChartPlotData) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.StackedBarCategoryJFreeChartPlotData

Creates a copy

StackInverterAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

Wrapper around ImageProcessor

StackInverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackInverterAlgorithm

Instantiates a new node type.

StackInverterAlgorithm(StackInverterAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackInverterAlgorithm

Instantiates a new node type.

StackSplitterAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

Wrapper around ChannelArranger

StackSplitterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm

Instantiates a new node type.

StackSplitterAlgorithm(StackSplitterAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm

Creates a copy

StackTo2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

Wrapper around ImageProcessor

StackTo2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm

Instantiates a new node type.

StackTo2DAlgorithm(StackTo2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm

Instantiates a new node type.

StackToDimensionMerger2Algorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

Wrapper around ImageProcessor

StackToDimensionMerger2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackToDimensionMerger2Algorithm

Instantiates a new node type.

StackToDimensionMerger2Algorithm(StackToDimensionMerger2Algorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackToDimensionMerger2Algorithm

Instantiates a new node type.

StackToDimensionMergerAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

Wrapper around ImageProcessor

StackToDimensionMergerAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackToDimensionMergerAlgorithm

Instantiates a new node type.

StackToDimensionMergerAlgorithm(StackToDimensionMergerAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackToDimensionMergerAlgorithm

Instantiates a new node type.

StackToMontage2Algorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage

Implementation of MontageMaker

StackToMontage2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontage2Algorithm

StackToMontage2Algorithm(StackToMontage2Algorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontage2Algorithm

StackToMontageAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage

Deprecated.

StackToMontageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

StackToMontageAlgorithm(StackToMontageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage.StackToMontageAlgorithm

Deprecated.

STANDARD_DATA_OPERATIONS - Static variable in class org.hkijena.jipipe.plugins.plots.PlotsPlugin

StandardParametersPlugin - Class in org.hkijena.jipipe.plugins.parameters

Provides some standard parameters

StandardParametersPlugin() - Constructor for class org.hkijena.jipipe.plugins.parameters.StandardParametersPlugin

StandardSettingsPlugin - Class in org.hkijena.jipipe.plugins.settings

Extension that provides all JIPipe included settings sheets

StandardSettingsPlugin() - Constructor for class org.hkijena.jipipe.plugins.settings.StandardSettingsPlugin

start() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopAnimatedIcon

start() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.SpinnerIcon

start(Process) - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationExecuteWatchdog

start() - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog

startAndJoin(Thread[]) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Hough_Circle

Start all given threads and wait on each of them until all are done.

startDownloadFullData() - Method in class org.hkijena.jipipe.desktop.api.dataviewer.JIPipeDesktopDataViewerWindow

Starts the download of the full data for the current data browser.

StartedEvent(JIPipeRunnable, JIPipeRunnableWorker) - Constructor for class org.hkijena.jipipe.api.run.JIPipeRunnable.StartedEvent

StartedEventEmitter() - Constructor for class org.hkijena.jipipe.api.run.JIPipeRunnable.StartedEventEmitter

startRun() - Method in class org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunExecuteUI

Starts the run

startTransform() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.Hough_Circle

State() - Constructor for class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.State

StatementOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

Operator that is used to make different statements The return value is the right statement

StatementOperator(int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.StatementOperator

StateSavedEvent(Object, JIPipeDesktopDockPanel.State) - Constructor for class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.StateSavedEvent

StateSavedEventEmitter() - Constructor for class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.StateSavedEventEmitter

StaticDebouncer - Class in org.hkijena.jipipe.utils.debounce

StaticDebouncer(long, TimeUnit, Runnable) - Constructor for class org.hkijena.jipipe.utils.debounce.StaticDebouncer

StaticDebouncer(long, Runnable) - Constructor for class org.hkijena.jipipe.utils.debounce.StaticDebouncer

StatisticalCategoryJFreeChartPlotData - Class in org.hkijena.jipipe.plugins.plots.datatypes

Contains data for statistical plots.

StatisticalCategoryJFreeChartPlotData() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.StatisticalCategoryJFreeChartPlotData

Creates a new instance

StatisticalCategoryJFreeChartPlotData(StatisticalCategoryJFreeChartPlotData) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.StatisticalCategoryJFreeChartPlotData

Creates a copy

StatisticsAverageSummarizingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.integrating

Implements calculating the average

StatisticsAverageSummarizingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsAverageSummarizingColumnOperation

StatisticsCountNonZeroSummarizingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.integrating

Implements counting non-zero elements

StatisticsCountNonZeroSummarizingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsCountNonZeroSummarizingColumnOperation

StatisticsCountSummarizingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.integrating

Implements calculating the number of rows

StatisticsCountSummarizingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsCountSummarizingColumnOperation

StatisticsCumulativeSumColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.integrating

Implements calculating the cumulative sum Y_0=X_0; Y_i=Y_{i-1}+X_i

StatisticsCumulativeSumColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsCumulativeSumColumnOperation

StatisticsGeometricMeanSummarizingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.integrating

Implements calculating the geometric mean

StatisticsGeometricMeanSummarizingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsGeometricMeanSummarizingColumnOperation

StatisticsKurtosisSummarizingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.integrating

Implements calculating the kurtosis

StatisticsKurtosisSummarizingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsKurtosisSummarizingColumnOperation

StatisticsMaxSummarizingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.integrating

Implements calculating the max value

StatisticsMaxSummarizingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsMaxSummarizingColumnOperation

StatisticsMedianSummarizingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.integrating

Implements calculating the median value

StatisticsMedianSummarizingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsMedianSummarizingColumnOperation

StatisticsMinSummarizingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.integrating

Implements calculating the min value

StatisticsMinSummarizingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsMinSummarizingColumnOperation

StatisticsModeSummarizingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.integrating

Implements calculating the mode value (most common value)

StatisticsModeSummarizingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsModeSummarizingColumnOperation

StatisticsSkewnessSummarizingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.integrating

Implements calculating the skewness

StatisticsSkewnessSummarizingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsSkewnessSummarizingColumnOperation

StatisticsStandardDeviationSummarizingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.integrating

Implements calculating the standard deviation

StatisticsStandardDeviationSummarizingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsStandardDeviationSummarizingColumnOperation

StatisticsVarianceSummarizingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.integrating

Implements calculating the variance

StatisticsVarianceSummarizingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsVarianceSummarizingColumnOperation

StatisticsWeightedSumColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.integrating

Implements calculating the weighted sum sum_{i=1,2,...}

StatisticsWeightedSumColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.integrating.StatisticsWeightedSumColumnOperation

StatusUpdatedEvent(JIPipeProgressInfo, int, int, String) - Constructor for class org.hkijena.jipipe.api.JIPipeProgressInfo.StatusUpdatedEvent

StatusUpdatedEventEmitter() - Constructor for class org.hkijena.jipipe.api.JIPipeProgressInfo.StatusUpdatedEventEmitter

STDOUT - Static variable in class org.hkijena.jipipe.api.JIPipeProgressInfo

stop() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.JIPipeDesktopAnimatedIcon

stop() - Method in class org.hkijena.jipipe.desktop.commons.components.icons.SpinnerIcon

stop() - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationExecuteWatchdog

stop() - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog

stopCellEditing() - Method in class org.hkijena.jipipe.desktop.app.tableeditor.JIPipeDesktopTableEditor.NumberEditor

store(JIPipeGraphNode, UUID, JIPipeDataTable, String, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache

store(JIPipeGraphNode, UUID, JIPipeDataTable, String, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache

Store<T> - Interface in org.hkijena.jipipe.utils.data

Stores data.

StoredEvent(JIPipeCache, UUID, JIPipeDataTable, String) - Constructor for class org.hkijena.jipipe.api.cache.JIPipeCache.StoredEvent

StoredEventEmitter() - Constructor for class org.hkijena.jipipe.api.cache.JIPipeCache.StoredEventEmitter

StreamUtils - Class in org.hkijena.jipipe.utils

Utils for Java's stream API

StreamUtils() - Constructor for class org.hkijena.jipipe.utils.StreamUtils

stretchHistogram(ImagePlus, double, boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm

stretchHistogram(ImageProcessor, double, boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm

stretchHistogram(ImageProcessor, double, ImageStatistics, boolean) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm

StrikeThroughAction() - Constructor for class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor.StrikeThroughAction

Constructs a new StrikeThroughAction.

STRING - Static variable in class org.hkijena.jipipe.plugins.r.ui.RTokenMaker

StringAndStringPairParameter - Class in org.hkijena.jipipe.plugins.parameters.library.pairs

A parameter that renames an integer into another integer

StringAndStringPairParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.StringAndStringPairParameter

Creates a new instance

StringAndStringPairParameter(String, String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.StringAndStringPairParameter

StringAndStringPairParameter(StringAndStringPairParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.StringAndStringPairParameter

Creates a copy

StringAndStringPairParameter.List - Class in org.hkijena.jipipe.plugins.parameters.library.pairs

A collection of multiple StringAndStringPairParameter

StringArrayColumnToTableConverter - Class in org.hkijena.jipipe.plugins.tables

Converts a column to a table

StringArrayColumnToTableConverter() - Constructor for class org.hkijena.jipipe.plugins.tables.StringArrayColumnToTableConverter

StringArrayParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays

StringArrayParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.arrays.StringArrayParameterImageJ2ModuleInput

StringArrayTableColumnData - Class in org.hkijena.jipipe.plugins.tables.datatypes

TableColumnData that contains doubles.

StringArrayTableColumnData(String[], String) - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.StringArrayTableColumnData

Creates a new instance

StringData - Class in org.hkijena.jipipe.plugins.strings

A data type that contains a string

StringData(String) - Constructor for class org.hkijena.jipipe.plugins.strings.StringData

StringData(StringData) - Constructor for class org.hkijena.jipipe.plugins.strings.StringData

StringDataConverter - Class in org.hkijena.jipipe.plugins.strings

StringDataConverter(Class<? extends JIPipeData>) - Constructor for class org.hkijena.jipipe.plugins.strings.StringDataConverter

StringDataViewer - Class in org.hkijena.jipipe.plugins.strings

StringDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.strings.StringDataViewer

StringDefinitionDataSource - Class in org.hkijena.jipipe.plugins.strings.datasources

StringDefinitionDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.strings.datasources.StringDefinitionDataSource

StringDefinitionDataSource(StringDefinitionDataSource) - Constructor for class org.hkijena.jipipe.plugins.strings.datasources.StringDefinitionDataSource

StringDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Parameter editor for String

StringDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.StringDesktopParameterEditorUI

StringEndsWithPredicateFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

StringEndsWithPredicateFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.StringEndsWithPredicateFunction

StringFirstIndexOfFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

StringFirstIndexOfFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.StringFirstIndexOfFunction

StringFixFileNameFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

StringFixFileNameFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.StringFixFileNameFunction

StringFormatFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

StringFormatFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.StringFormatFunction

StringFormData - Class in org.hkijena.jipipe.plugins.forms.datatypes

StringFormData() - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.StringFormData

StringFormData(StringFormData) - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.StringFormData

StringFormGeneratorAlgorithm - Class in org.hkijena.jipipe.plugins.forms.algorithms.generators

StringFormGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.generators.StringFormGeneratorAlgorithm

StringFormGeneratorAlgorithm(StringFormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.forms.algorithms.generators.StringFormGeneratorAlgorithm

StringJoinFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

StringJoinFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.StringJoinFunction

StringLastIndexOfFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

StringLastIndexOfFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.StringLastIndexOfFunction

StringList - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.list

A list of String

StringList() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.list.StringList

Creates a new empty list

StringList(String...) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.list.StringList

Creates a new list from the provided items

StringList(Collection<String>) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.list.StringList

Creates a new list from the provided items

StringMapQueryExpression - Class in org.hkijena.jipipe.plugins.expressions

StringMapQueryExpression() - Constructor for class org.hkijena.jipipe.plugins.expressions.StringMapQueryExpression

StringMapQueryExpression(String) - Constructor for class org.hkijena.jipipe.plugins.expressions.StringMapQueryExpression

StringMapQueryExpression(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.plugins.expressions.StringMapQueryExpression

stringModelFromTableModel(TableModel) - Static method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Converts a table model into a string results table

StringOrDouble - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

Can either filter a string or a double

StringOrDouble() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.StringOrDouble

Creates a new instance

StringOrDouble(StringOrDouble) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.StringOrDouble

Copies the object

StringOrDouble.List - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

A collection of multiple StringOrDouble The filters are connected via "OR"

StringOrDouble.Mode - Enum in org.hkijena.jipipe.plugins.parameters.library.primitives

Modes are that a column is picked or one is generated

StringOrDoubleDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.primitives

A parameter editor UI for StringOrDouble

StringOrDoubleDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.StringOrDoubleDesktopParameterEditorUI

StringParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives

StringParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.primitives.StringParameterImageJ2ModuleInput

StringParameterImageJ2ModuleOutput - Class in org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives

StringParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.primitives.StringParameterImageJ2ModuleOutput

StringParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.parameters.library.primitives

Settings for String parameters

StringPatternExtraction - Class in org.hkijena.jipipe.plugins.parameters.library.patterns

A parameter that extracts a pattern from a string

StringPatternExtraction() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtraction

Creates a new instance

StringPatternExtraction(StringPatternExtraction) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtraction

Creates a copy

StringPatternExtraction.List - Class in org.hkijena.jipipe.plugins.parameters.library.patterns

A collection of multiple StringPatternExtraction

StringPatternExtraction.Mode - Enum in org.hkijena.jipipe.plugins.parameters.library.patterns

Available modes

StringPatternExtractionDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.patterns

Editor for StringPatternExtraction

StringPatternExtractionDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtractionDesktopParameterEditorUI

StringPatternExtractionFunction - Class in org.hkijena.jipipe.plugins.parameters.api.functions

A function entry that applies pattern extraction to an String

StringPatternExtractionFunction() - Constructor for class org.hkijena.jipipe.plugins.parameters.api.functions.StringPatternExtractionFunction

Creates a new instance

StringPatternExtractionFunction(StringPatternExtractionFunction) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.functions.StringPatternExtractionFunction

Creates a copy

StringPatternExtractionFunction.List - Class in org.hkijena.jipipe.plugins.parameters.api.functions

List of StringPatternExtractionFunction

StringQueryExpression - Class in org.hkijena.jipipe.plugins.expressions

Expression for querying strings

StringQueryExpression() - Constructor for class org.hkijena.jipipe.plugins.expressions.StringQueryExpression

StringQueryExpression(String) - Constructor for class org.hkijena.jipipe.plugins.expressions.StringQueryExpression

StringQueryExpression(StringQueryExpression) - Constructor for class org.hkijena.jipipe.plugins.expressions.StringQueryExpression

StringQueryExpressionAndSortOrderPairParameter - Class in org.hkijena.jipipe.plugins.parameters.library.pairs

A pair of StringQueryExpression and SortOrder

StringQueryExpressionAndSortOrderPairParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.StringQueryExpressionAndSortOrderPairParameter

Creates a new instance

StringQueryExpressionAndSortOrderPairParameter(StringQueryExpressionAndSortOrderPairParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.StringQueryExpressionAndSortOrderPairParameter

Creates a copy

StringQueryExpressionAndSortOrderPairParameter.List - Class in org.hkijena.jipipe.plugins.parameters.library.pairs

A collection of multiple StringQueryExpressionAndSortOrderPairParameter

StringQueryExpressionAndStringPairParameter - Class in org.hkijena.jipipe.plugins.parameters.library.pairs

A parameter that renames a matching string into another string

StringQueryExpressionAndStringPairParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.StringQueryExpressionAndStringPairParameter

Creates a new instance

StringQueryExpressionAndStringPairParameter(String, String) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.StringQueryExpressionAndStringPairParameter

StringQueryExpressionAndStringPairParameter(StringQueryExpressionAndStringPairParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.StringQueryExpressionAndStringPairParameter

Creates a copy

StringQueryExpressionAndStringPairParameter.List - Class in org.hkijena.jipipe.plugins.parameters.library.pairs

A collection of multiple StringQueryExpressionAndStringPairParameter

StringQueryExpressionAndStringQueryPairParameter - Class in org.hkijena.jipipe.plugins.parameters.library.pairs

A parameter that renames a matching string into another string

StringQueryExpressionAndStringQueryPairParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.StringQueryExpressionAndStringQueryPairParameter

Creates a new instance

StringQueryExpressionAndStringQueryPairParameter(StringQueryExpressionAndStringQueryPairParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.pairs.StringQueryExpressionAndStringQueryPairParameter

Creates a copy

StringQueryExpressionAndStringQueryPairParameter.List - Class in org.hkijena.jipipe.plugins.parameters.library.pairs

A collection of multiple StringQueryExpressionAndStringQueryPairParameter

StringQueryExpressionVariablesInfo - Class in org.hkijena.jipipe.plugins.expressions

Variables for querying strings

StringQueryExpressionVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.expressions.StringQueryExpressionVariablesInfo

StringRegexReplaceFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

StringRegexReplaceFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.StringRegexReplaceFunction

StringReplaceFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

StringReplaceFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.StringReplaceFunction

StringSliceBeforeFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

StringSliceBeforeFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.StringSliceBeforeFunction

StringSliceFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

StringSliceFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.StringSliceFunction

StringSplitFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

StringSplitFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.StringSplitFunction

StringsPlugin - Class in org.hkijena.jipipe.plugins.strings

Provides data types dor handling strings

StringsPlugin() - Constructor for class org.hkijena.jipipe.plugins.strings.StringsPlugin

StringStartsWithPredicateFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

StringStartsWithPredicateFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.StringStartsWithPredicateFunction

StringToLowerCaseFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

StringToLowerCaseFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.StringToLowerCaseFunction

StringToUpperCaseFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

StringToUpperCaseFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.StringToUpperCaseFunction

StringTrimFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

StringTrimFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.StringTrimFunction

StringTruncateFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.string

StringTruncateFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.string.StringTruncateFunction

StringUtils - Class in org.hkijena.jipipe.utils

Utilities for strings

STROKE_COMMENT - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

STROKE_COMMENT_HIGHLIGHT - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

STROKE_GUIDE_LINE - Static variable in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D

STROKE_MARQUEE - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

STROKE_MARQUEE - Static variable in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIPicker2DTool

STROKE_SELECTED - Static variable in class org.hkijena.jipipe.plugins.imageviewer.utils.CustomGradientThumbRenderer

STROKE_SELECTION - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

STROKE_SMART_EDGE - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

STROKE_THICK - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

STROKE_UNIT - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

STROKE_UNIT_COMMENT - Static variable in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

StrongObjectSubscriber(Listener) - Constructor for class org.hkijena.jipipe.api.events.JIPipeEventEmitter.StrongObjectSubscriber

StructureFeatureAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

StructureFeatureAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.StructureFeatureAlgorithm

Instantiates a new node type.

StructureFeatureAlgorithm(StructureFeatureAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.StructureFeatureAlgorithm

Instantiates a new node type.

styleText(boolean, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyPasswordField

styleText(boolean, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyReadOnlyTextArea

styleText(boolean, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyReadOnlyTextField

styleText(boolean, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFancyTextField

SubdivideFilamentEdges - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

SubdivideFilamentEdges(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SubdivideFilamentEdges

SubdivideFilamentEdges(SubdivideFilamentEdges) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.modify.SubdivideFilamentEdges

subList(int, int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

subList(int, int) - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

subscribe(Listener) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter

subscribeLambda(BiConsumer<JIPipeEventEmitter<Event, Listener>, Event>) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter

subscribeLambdaOnce(BiConsumer<JIPipeEventEmitter<Event, Listener>, Event>) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter

subscribeWeak(Listener) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter

SubscriptAction() - Constructor for class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor.SubscriptAction

Constructs a new StrikeThroughAction.

subtract(List<Double>, List<Double>) - Static method in class org.hkijena.jipipe.utils.VectorUtils

SubtractionFunctionOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

SubtractionFunctionOperator(int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.SubtractionFunctionOperator

SugiyamaGraphAutoLayoutImplementation - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.layout

Applies auto-layout according to Sugiyama et al.

SugiyamaGraphAutoLayoutImplementation() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.layout.SugiyamaGraphAutoLayoutImplementation

SummarizeAnnotationsMapFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

SummarizeAnnotationsMapFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.SummarizeAnnotationsMapFunction

SummarizeMapFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.collections

SummarizeMapFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.collections.SummarizeMapFunction

SummarizeVariablesFunction - Class in org.hkijena.jipipe.plugins.expressions.functions

SummarizeVariablesFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.SummarizeVariablesFunction

SummarizingColumnOperation - Interface in org.hkijena.jipipe.plugins.tables

A ColumnOperation that creates an integrated output (meaning that the output only contains one entry)

SumSummarizingColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.integrating

Implements calculating the sum

SumSummarizingColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.integrating.SumSummarizingColumnOperation

SuperscriptAction() - Constructor for class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor.SuperscriptAction

Constructs a new StrikeThroughAction.

supports(AbstractJIPipeDesktopGraphEditorUI) - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool

supports(AbstractJIPipeDesktopGraphEditorUI) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool

supportsAllParameterTypes() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection

supportsNativeImageImport(Path) - Static method in class org.hkijena.jipipe.utils.CoreImageJUtils

supportsParallelization() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm

supportsParallelization() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeParallelizedAlgorithm

Indicates to the algorithm base implementation if parallelization is supported.

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.ij3d.nodes.filters.Fast3DFiltersAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots.SpotDetectorNode

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.BoxFilter2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.GaussianBlur2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurFilter2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurGreyscale8U2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur.MedianBlurRGB2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.BlendImagesAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.InvertColorsAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeChannelsAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.OverlayImagesAlgorithm

Deprecated.

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsAlgorithm

Deprecated.

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.IlluminationCorrection2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve.ConvolveByImage2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve.ConvolveByParameter2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.CircularHoughSegmentation2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.FastCircularHoughSegmentation2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.CreateStackAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackInverterAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackToDimensionMerger2Algorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.StackToDimensionMergerAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.SobelEdgeDetectorAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.FrangiVesselnessFeatures

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.HessianFeatureAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LaplacianOfGaussian2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.StructureFeatureAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFT2DForwardTransform

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFT2DInverseTransform

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFT2DSwapQuadrants

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawMaskAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.DrawROIAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateMissingZeroImage

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateStructureElement2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateStructureElement3DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.GenerateZeroImage

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate.ImageFromMatrix2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyMathExpression2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap.ApplyDistanceTransform2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.DivideByMaximumAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateFromMathExpression2D

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.Hessian2DAlgorithm

Deprecated.

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm

Deprecated.

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyApplyMath2DAlgorithm

Deprecated.

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DAlgorithm

Deprecated.

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMaximumFilter2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMinimumFilter2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalVarianceFilter2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.RemoveNaNFilter2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyFillHoles2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyInternalGradient2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyOutline2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologySkeletonize2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.AddNoise2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.AddSaltAndPepperNoise2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.DespeckleFilter2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.CountROIAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.sharpen.LaplacianSharpen2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.PercentileThreshold8U2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ThresholdByAnnotation2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformFlip2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROImageAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.omero.nodes.download.DownloadOMEROTableAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROImageToDatasetAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.opencv.nodes.InpaintingAlgorithm

supportsParallelization() - Method in class org.hkijena.jipipe.plugins.utils.algorithms.meta.RunJIPipeProjectAlgorithm

SwitchCaseFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.control

SwitchCaseFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.control.SwitchCaseFunction

SwitchFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.control

SwitchFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.control.SwitchFunction

SwitchMapFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.control

SwitchMapFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.control.SwitchMapFunction

switchToContent(Component) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Switches to the provided content

switchToLastTab() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Switches the the last tab.

switchToMode(ExpressionBuilderParameterUI.Mode) - Method in class org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderParameterUI

switchToTab(JIPipeDesktopTabPane.DocumentTab) - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane

Switches to the provided tab

SymmetryFilter3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.features

SymmetryFilter3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.features.SymmetryFilter3DAlgorithm

SymmetryFilter3DAlgorithm(SymmetryFilter3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.features.SymmetryFilter3DAlgorithm

systemIsMacM1() - Static method in class org.hkijena.jipipe.utils.ProcessUtils

T

TAB_COMPARTMENT_EDITOR - Static variable in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

TAB_INTRODUCTION - Static variable in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

TAB_LICENSE - Static variable in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

TAB_LOG - Static variable in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

TAB_NOTIFICATIONS - Static variable in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

TAB_PLUGIN_VALIDITY_CHECK - Static variable in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

TAB_PROJECT_OVERVIEW - Static variable in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

TAB_VALIDITY_CHECK - Static variable in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

tabAreaBackground - Variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

TABBED_DOCUMENTATION - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Puts the documentation into a JIPipeDesktopTabPane if WITH_DOCUMENTATION is active

tabbedPane - Variable in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopDnDTabbedPaneGhostGlassPane

TabbedPaneLayout() - Constructor for class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI.TabbedPaneLayout

TabExternalEditor(JIPipeDesktopWorkbench, WeakReference<JIPipeParameterCollection>, String, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI.TabExternalEditor

TableCellExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.expressions

TableCellExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.expressions.TableCellExpressionParameterVariablesInfo

TableCellValueExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.expressions

TableCellValueExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.expressions.TableCellValueExpressionParameterVariablesInfo

TableCellValueQueryExpression - Class in org.hkijena.jipipe.plugins.expressions

Expression for querying strings

TableCellValueQueryExpression() - Constructor for class org.hkijena.jipipe.plugins.expressions.TableCellValueQueryExpression

TableCellValueQueryExpression(String) - Constructor for class org.hkijena.jipipe.plugins.expressions.TableCellValueQueryExpression

TableCellValueQueryExpression(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.plugins.expressions.TableCellValueQueryExpression

TableColumnConversionParameter - Class in org.hkijena.jipipe.plugins.tables.parameters.enums

Enum-like parameter that allows the selection of a ConvertingColumnOperation.

TableColumnConversionParameter() - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnConversionParameter

Creates a new instance

TableColumnConversionParameter(TableColumnConversionParameter) - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnConversionParameter

Creates a copy

TableColumnData - Interface in org.hkijena.jipipe.plugins.tables.datatypes

An JIPipeData type that represents a column.

TableColumnDataReference - Class in org.hkijena.jipipe.plugins.tables

A table column that references a column within a ResultsTableData

TableColumnDataReference(ResultsTableData, int) - Constructor for class org.hkijena.jipipe.plugins.tables.TableColumnDataReference

TableColumnDataViewer - Class in org.hkijena.jipipe.plugins.tables.display

TableColumnDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.tables.display.TableColumnDataViewer

TableColumnGeneratorDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.tables.parameters.enums

A parameter editor UI that works for all enumerations

TableColumnGeneratorDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnGeneratorDesktopParameterEditorUI

TableColumnGeneratorParameter - Class in org.hkijena.jipipe.plugins.tables.parameters.enums

A parameter that allows the user to setup a table column generator

TableColumnGeneratorParameter() - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnGeneratorParameter

Creates a new instance

TableColumnGeneratorParameter(TableColumnGeneratorParameter) - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnGeneratorParameter

Creates a copy

TableColumnGeneratorProcessor - Class in org.hkijena.jipipe.plugins.tables.parameters.processors

Processor-like parameter that maps a column generator to a string

TableColumnGeneratorProcessor() - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.processors.TableColumnGeneratorProcessor

Creates a new instance

TableColumnGeneratorProcessor(TableColumnGeneratorProcessor) - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.processors.TableColumnGeneratorProcessor

Creates a copy

TableColumnGeneratorProcessorParameterList - Class in org.hkijena.jipipe.plugins.tables.parameters.collections

TableColumnGeneratorProcessorParameterList() - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.collections.TableColumnGeneratorProcessorParameterList

Creates a new instance

TableColumnGeneratorProcessorParameterList(TableColumnGeneratorProcessorParameterList) - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.collections.TableColumnGeneratorProcessorParameterList

Creates a copy

TableColumnIntegrationParameter - Class in org.hkijena.jipipe.plugins.tables.parameters.enums

Enum-like parameter that allows the selection of a SummarizingColumnOperation.

TableColumnIntegrationParameter() - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnIntegrationParameter

Creates a new instance

TableColumnIntegrationParameter(TableColumnIntegrationParameter) - Constructor for class org.hkijena.jipipe.plugins.tables.parameters.enums.TableColumnIntegrationParameter

Creates a copy

TableColumnNormalization - Enum in org.hkijena.jipipe.plugins.tables.datatypes

TableColumnSourceExpressionParameter - Class in org.hkijena.jipipe.plugins.expressions

Parameter that acts as source (via matching a column) or a generator

TableColumnSourceExpressionParameter() - Constructor for class org.hkijena.jipipe.plugins.expressions.TableColumnSourceExpressionParameter

TableColumnSourceExpressionParameter(TableColumnSourceExpressionParameter.TableSourceType, String) - Constructor for class org.hkijena.jipipe.plugins.expressions.TableColumnSourceExpressionParameter

TableColumnSourceExpressionParameter(TableColumnSourceExpressionParameter) - Constructor for class org.hkijena.jipipe.plugins.expressions.TableColumnSourceExpressionParameter

TableColumnSourceExpressionParameter.List - Class in org.hkijena.jipipe.plugins.expressions

TableColumnSourceExpressionParameter.TableSourceType - Enum in org.hkijena.jipipe.plugins.expressions

TableColumnSourceExpressionParameter.VariablesInfo - Class in org.hkijena.jipipe.plugins.expressions

TableColumnToImageAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert

TableColumnToImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableColumnToImageAlgorithm

TableColumnToImageAlgorithm(TableColumnToImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableColumnToImageAlgorithm

TableColumnValuesExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.expressions

TableColumnValuesExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.expressions.TableColumnValuesExpressionParameterVariablesInfo

tableFromOMERO(TableData) - Static method in class org.hkijena.jipipe.plugins.omero.util.OMEROUtils

TableNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories

TableNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory

TablesFromScript - Class in org.hkijena.jipipe.plugins.tables.nodes

Algorithm that annotates all data with the same annotation

TablesFromScript(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.TablesFromScript

TablesFromScript(TablesFromScript) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.TablesFromScript

Copies the algorithm

TablesPlugin - Class in org.hkijena.jipipe.plugins.tables

Standard set of table operations

TablesPlugin() - Constructor for class org.hkijena.jipipe.plugins.tables.TablesPlugin

TableToCircularROIAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate

Wrapper around RoiManager

TableToCircularROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

Instantiates a new node type.

TableToCircularROIAlgorithm(TableToCircularROIAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm

Creates a copy

TableToCSVTextAlgorithm - Class in org.hkijena.jipipe.plugins.strings.nodes.text

TableToCSVTextAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.text.TableToCSVTextAlgorithm

TableToCSVTextAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.text.TableToCSVTextAlgorithm

TableToHistogram2Algorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.transform

TableToHistogram2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm

TableToHistogram2Algorithm(TableToHistogram2Algorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogram2Algorithm

TableToHistogram2Algorithm.HistogramBin - Class in org.hkijena.jipipe.plugins.tables.nodes.transform

TableToHistogram2Algorithm.OutputColumn - Class in org.hkijena.jipipe.plugins.tables.nodes.transform

TableToHistogramAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.transform

Deprecated.

TableToHistogramAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

TableToHistogramAlgorithm(TableToHistogramAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.transform.TableToHistogramAlgorithm

Deprecated.

TableToHistogramAlgorithm.AdditionalColumn - Class in org.hkijena.jipipe.plugins.tables.nodes.transform

Deprecated.

TableToImageAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert

TableToImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableToImageAlgorithm

TableToImageAlgorithm(TableToImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert.TableToImageAlgorithm

TableToLineROIAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate

Wrapper around RoiManager

TableToLineROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

Instantiates a new node type.

TableToLineROIAlgorithm(TableToLineROIAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToLineROIAlgorithm

Creates a copy

tableToOMERO(ResultsTableData) - Static method in class org.hkijena.jipipe.plugins.omero.util.OMEROUtils

TableToPointROIAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate

Wrapper around RoiManager

TableToPointROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

Instantiates a new node type.

TableToPointROIAlgorithm(TableToPointROIAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToPointROIAlgorithm

Creates a copy

TableToRectangularROIAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate

Wrapper around RoiManager

TableToRectangularROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

Instantiates a new node type.

TableToRectangularROIAlgorithm(TableToRectangularROIAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm

Creates a copy

TableToRectangularROIAlgorithm.Anchor - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate

Available anchors

TableToRectangularROIAlgorithm.Mode - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate

TableToTextROIAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate

Wrapper around RoiManager

TableToTextROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

Instantiates a new node type.

TableToTextROIAlgorithm(TableToTextROIAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToTextROIAlgorithm

Creates a copy

TableUtils - Class in org.hkijena.jipipe.utils

Utilities for TableModel

TableViewerLegacyCacheDataViewerWindow - Class in org.hkijena.jipipe.plugins.tables.display

TableViewerLegacyCacheDataViewerWindow(JIPipeDesktopWorkbench, JIPipeDataTableDataSource, String, boolean) - Constructor for class org.hkijena.jipipe.plugins.tables.display.TableViewerLegacyCacheDataViewerWindow

TabRenamedEvent(JIPipeDesktopTabPane, JIPipeDesktopTabPane.DocumentTab) - Constructor for class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.TabRenamedEvent

TabRenamedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.TabRenamedEventEmitter

TabSettings() - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.FormData.TabSettings

TabSettings(FormData.TabSettings) - Constructor for class org.hkijena.jipipe.plugins.forms.datatypes.FormData.TabSettings

TAGGED_SKELETONS_IMAGE_OUTPUT_SLOT - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm

TangentColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Applies a sine function

TangentColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.TangentColumnOperation

Task(String, JIPipeDesktopRibbon.Band...) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Task

Task(String, List<JIPipeDesktopRibbon.Band>) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Task

Task(String, String, JIPipeDesktopRibbon.Band...) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Task

Task(String, String, List<JIPipeDesktopRibbon.Band>) - Constructor for class org.hkijena.jipipe.desktop.commons.components.ribbon.JIPipeDesktopRibbon.Task

TemplateMatchingMethod - Enum in org.hkijena.jipipe.plugins.ijmultitemplatematching

TemplatesDummyNodeTypeCategory() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.addnodepanel.JIPipeDesktopAddNodesPanel.TemplatesDummyNodeTypeCategory

TemplatesUpdatedEvent(JIPipeProjectTemplateRegistry) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry.TemplatesUpdatedEvent

TemplatesUpdatedEventEmitter() - Constructor for class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry.TemplatesUpdatedEventEmitter

TemporaryFileDataSource - Class in org.hkijena.jipipe.plugins.filesystem.datasources

TemporaryFileDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.TemporaryFileDataSource

TemporaryFileDataSource(TemporaryFileDataSource) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.TemporaryFileDataSource

TemporaryFolderDataSource - Class in org.hkijena.jipipe.plugins.filesystem.datasources

TemporaryFolderDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.TemporaryFolderDataSource

TemporaryFolderDataSource(TemporaryFolderDataSource) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.TemporaryFolderDataSource

TesseractLanguagesSupplier - Class in org.hkijena.jipipe.plugins.ijocr.utils

TesseractLanguagesSupplier() - Constructor for class org.hkijena.jipipe.plugins.ijocr.utils.TesseractLanguagesSupplier

TesseractOCRAlgorithm - Class in org.hkijena.jipipe.plugins.ijocr.nodes

TesseractOCRAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijocr.nodes.TesseractOCRAlgorithm

TesseractOCRAlgorithm(TesseractOCRAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijocr.nodes.TesseractOCRAlgorithm

TesseractOCRApplicationSettings - Class in org.hkijena.jipipe.plugins.ijocr.settings

TesseractOCRApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.ijocr.settings.TesseractOCRApplicationSettings

TesseractOCREngineMode - Enum in org.hkijena.jipipe.plugins.ijocr.utils

TesseractOCREnvironment - Class in org.hkijena.jipipe.plugins.ijocr.environments

Parameter that describes a TSOAX environment

TesseractOCREnvironment() - Constructor for class org.hkijena.jipipe.plugins.ijocr.environments.TesseractOCREnvironment

TesseractOCREnvironment(TesseractOCREnvironment) - Constructor for class org.hkijena.jipipe.plugins.ijocr.environments.TesseractOCREnvironment

TesseractOCREnvironment.List - Class in org.hkijena.jipipe.plugins.ijocr.environments

A list of TesseractOCREnvironment

TesseractPageSegmentationMethod - Enum in org.hkijena.jipipe.plugins.ijocr.utils

test(Path) - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.JIPipeDesktopFileChooserNextPathTypeMetadata

test(String) - Method in class org.hkijena.jipipe.desktop.commons.components.search.JIPipeDesktopSearchTextField

test(Collection<JIPipeTextAnnotation>, String, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotationFilterExpression

Evaluates the expression as boolean

test(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

Runs the expression and returns the boolean result.

test(Collection<JIPipeTextAnnotation>, String, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.AnnotationGeneratorExpression

Evaluates the expression as boolean

test(JIPipeDataSlot, int) - Method in class org.hkijena.jipipe.plugins.expressions.DataRowQueryExpression

Returns true if the data contained in this slot matches the expression

test(String, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.ExpressionEvaluator

Returns the boolean evaluated expression.

test(String, String) - Method in class org.hkijena.jipipe.plugins.expressions.NamedStringQueryExpression

Tests if the key value pair is queried

test(Path) - Method in class org.hkijena.jipipe.plugins.expressions.PathQueryExpression

Returns true if the query matches the string

test(Path, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.PathQueryExpression

Returns true if the query matches the string

test(Map<String, String>) - Method in class org.hkijena.jipipe.plugins.expressions.StringMapQueryExpression

Tests if the query matches the key value pairs

test(Collection<String>) - Method in class org.hkijena.jipipe.plugins.expressions.StringMapQueryExpression

Tests if the query matches the keys=values.

test(String) - Method in class org.hkijena.jipipe.plugins.expressions.StringQueryExpression

Returns true if the query matches the string

test(String, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.StringQueryExpression

Returns true if the query matches the string

test(ResultsTableData, int, int) - Method in class org.hkijena.jipipe.plugins.expressions.TableCellValueQueryExpression

Returns true if the table cell is accepted by the expression

test(Class<?>) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.Image_16_32_Filter

test(Class<?>) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.Image_8_16_32_Filter

test(Class<?>) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.filters.NonGenericImagePlusDataClassFilter

test(Class<?>) - Method in class org.hkijena.jipipe.plugins.plots.JIPipePlotDataClassFilter

test(Class<?>) - Method in class org.hkijena.jipipe.utils.classfilters.AnyClassFilter

test(Class<?>) - Method in class org.hkijena.jipipe.utils.classfilters.NonGenericClassFilter

testAnyOf(Collection<Path>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.PathQueryExpression

Returns true of one of the strings matches the query.

testAnyOf(Collection<String>) - Method in class org.hkijena.jipipe.plugins.expressions.StringQueryExpression

Returns true of one of the strings matches the query.

testNetworkConnection() - Static method in class org.hkijena.jipipe.utils.NetworkUtils

Taken from ImageJUpdater Check whether we can connect to the Internet.

textAnnotationsToR(StringBuilder, Collection<JIPipeTextAnnotation>) - Static method in class org.hkijena.jipipe.plugins.r.RUtils

Converts annotations into R code.

TextBoxAnnotationGraphNode - Class in org.hkijena.jipipe.plugins.graphannotation.nodes

TextBoxAnnotationGraphNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.graphannotation.nodes.TextBoxAnnotationGraphNode

TextBoxAnnotationGraphNode(TextBoxAnnotationGraphNode) - Constructor for class org.hkijena.jipipe.plugins.graphannotation.nodes.TextBoxAnnotationGraphNode

TextBoxAnnotationGraphNode.ShapeParameters - Class in org.hkijena.jipipe.plugins.graphannotation.nodes

TextBoxAnnotationGraphNodeTool - Class in org.hkijena.jipipe.plugins.graphannotation.tools

TextBoxAnnotationGraphNodeTool() - Constructor for class org.hkijena.jipipe.plugins.graphannotation.tools.TextBoxAnnotationGraphNodeTool

textColor - Variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration

TextDataToTableAlgorithm - Class in org.hkijena.jipipe.plugins.strings.nodes.text

TextDataToTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.text.TextDataToTableAlgorithm

TextDataToTableAlgorithm(TextDataToTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.strings.nodes.text.TextDataToTableAlgorithm

TextDataToTableAlgorithm.Entry - Class in org.hkijena.jipipe.plugins.strings.nodes.text

TextLegacyCacheDataViewerWindow - Class in org.hkijena.jipipe.plugins.strings

Cached viewer for

TextLegacyCacheDataViewerWindow(JIPipeDesktopWorkbench, JIPipeDataTableDataSource, String, boolean) - Constructor for class org.hkijena.jipipe.plugins.strings.TextLegacyCacheDataViewerWindow

TextLocationParameters() - Constructor for class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters

TextLocationParameters(AbstractTextBoxAnnotationGraphNode.TextLocationParameters) - Constructor for class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters

TextRenderParameters() - Constructor for class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters

TextRenderParameters(AbstractTextBoxAnnotationGraphNode.TextRenderParameters) - Constructor for class org.hkijena.jipipe.plugins.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters

TextSettings() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings

TextSettings(DrawScaleBarAlgorithm.TextSettings) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings

TextSettings() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings

TextSettings(DrawScaleBarRoiAlgorithm.TextSettings) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings

theta - Variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines.HoughLine

ThresholdByAnnotation2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

Wrapper around ImageProcessor

ThresholdByAnnotation2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ThresholdByAnnotation2DAlgorithm

Instantiates a new node type.

ThresholdByAnnotation2DAlgorithm(ThresholdByAnnotation2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ThresholdByAnnotation2DAlgorithm

Instantiates a new node type.

ThresholdParameters() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters

ThresholdParameters(CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters

ThresholdParameters() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters

ThresholdParameters(CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters

ThresholdParameters() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters

ThresholdParameters(CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters

ThresholdsExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

ThresholdsExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.ThresholdsExpressionParameterVariablesInfo

thumbMoved(int, float) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerLUTEditor

thumbMoved(int, float) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerOpacityLUTEditor

thumbMoved(int, float) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl

thumbMoved(int, float) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI

Thumbnail() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail

Thumbnail(String, Dimension, Path, List<Path>) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail

Thumbnail(JIPipeDataThumbnailsMetadata.Thumbnail) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail

ThumbnailGeneratedEvent(JIPipeDataItemStore) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEvent

ThumbnailGeneratedEventEmitter() - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEventEmitter

ThumbnailGenerationRun(JIPipeThumbnailGenerationQueue, JIPipeDataItemStore, int, int) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGenerationRun

ThumbRenderer() - Constructor for class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.ThumbRenderer

ThumbRenderer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI.ThumbRenderer

thumbSelected(int) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerLUTEditor

thumbSelected(int) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.ImageViewerOpacityLUTEditor

thumbSelected(int) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl

thumbSelected(int) - Method in class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI

tighten(PointRange, PointRange) - Static method in class org.hkijena.jipipe.utils.PointRange

Modifies the center points, so they are closer together.

TileImage2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

Deprecated.

TileImage2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

TileImage2DAlgorithm(TileImage2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2DAlgorithm

Deprecated.

TileImage2Dv2Algorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

TileImage2Dv2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

TileImage2Dv2Algorithm(TileImage2Dv2Algorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm

tileMirror(ImageProcessor, int, int, int, int) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter

timeoutOccured(Watchdog) - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationExecuteWatchdog

toAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

Converts the column index to an annotation column index, or returns -1 if the column is not one

toAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableInfo

Converts the column index to an annotation column index, or returns -1 if the column is not one

toAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantDataTableUI.WrapperColumnHeaderRenderer

Converts the column index to an annotation column index, or returns -1 if the column is not one

toAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantTableModel

Converts the column index to an annotation column index, or returns -1 if the column is not one

toAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableModel

Converts the column index to an annotation column index, or returns -1 if the column is not one

toAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableUI.WrapperColumnHeaderRenderer

Converts the column index to an annotation column index, or returns -1 if the column is not one

toAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

Converts the column index to an annotation column index, or returns -1 if the column is not one

toAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerDataTableUI.WrapperColumnHeaderRenderer

Converts the column index to an annotation column index, or returns -1 if the column is not one

toAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerTableModel

Converts the column index to an annotation column index, or returns -1 if the column is not one

toAnnotationTable(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Converts the slot into an annotation table

toAnnotationTable() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

Converts the data table into an annotation table

toApacheVector3d() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.Point3d

toArray() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

toArray(T[]) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

toArray() - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

toArray(T[]) - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

ToBooleanFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.convert

ToBooleanFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.convert.ToBooleanFunction

toBufferedImage(Image, int) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils

Converts a given Image into a BufferedImage Applies conversion if the types do not match (useful for greyscale conversion)

toComboBoxModel(Collection<T>) - Static method in class org.hkijena.jipipe.utils.UIUtils

toCoordinateTransform() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationModel

toDataAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableInfo

Converts the column index to a data annotation column index, or returns -1 if the column is not one

toDataAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableInfo

Converts the column index to a data annotation column index, or returns -1 if the column is not one

toDataAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantDataTableUI.WrapperColumnHeaderRenderer

Converts the column index to a data annotation column index, or returns -1 if the column is not one

toDataAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantTableModel

Converts the column index to a data annotation column index, or returns -1 if the column is not one

toDataAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableModel

Converts the column index to a data annotation column index, or returns -1 if the column is not one

toDataAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableUI.WrapperColumnHeaderRenderer

Converts the column index to a data annotation column index, or returns -1 if the column is not one

toDataAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

Converts the column index to a data annotation column index, or returns -1 if the column is not one

toDataAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerDataTableUI.WrapperColumnHeaderRenderer

Converts the column index to a data annotation column index, or returns -1 if the column is not one

toDataAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerTableModel

Converts the column index to a data annotation column index, or returns -1 if the column is not one

ToDataStringAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms

ToDataStringAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.ToDataStringAlgorithm

ToDataStringAlgorithm(ToDataStringAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.ToDataStringAlgorithm

toDetailedString() - Method in interface org.hkijena.jipipe.api.data.JIPipeData

This method returns a detailed string description (with multi-line, etc.) of the data.

toDetailedString() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotDetectorData

toDetailedString() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotsCollectionData

toDetailedString() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotTrackerData

toDetailedString() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

toDummySlot(JIPipeDataSlotInfo, JIPipeGraphNode, JIPipeDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Creates a new dummy slot that contains the data of one input slot and the annotations of this batch

toDummySlot(JIPipeDataSlotInfo, JIPipeGraphNode, JIPipeDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

Creates a new dummy slot that contains the data of one input slot and the annotations of this batch

toFeatureFilter() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeatureFilterParameter

toFeatureFilter() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeatureFilterParameter

toFont(int, int) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.FontFamilyParameter

toFont(FontFamilyParameter, int) - Method in enum org.hkijena.jipipe.plugins.parameters.library.primitives.FontStyleParameter

toGeometry(Color, boolean, boolean, Quantity.LengthUnit, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3D

ToggledEvent(CustomStateLessToggleButton) - Constructor for class org.hkijena.jipipe.utils.CustomStateLessToggleButton.ToggledEvent

ToggledEventEmitter() - Constructor for class org.hkijena.jipipe.utils.CustomStateLessToggleButton.ToggledEventEmitter

toggleSlot(JIPipeDataSlotInfo, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Toggles a slot with given info on/off.

toGrayscale(opencv_core.Mat, int) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

toGreyscale(Color) - Static method in class org.hkijena.jipipe.utils.ColorUtils

ToHSBColorSpaceConverterAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color

ToHSBColorSpaceConverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color.ToHSBColorSpaceConverterAlgorithm

ToHSBColorSpaceConverterAlgorithm(ColorSpaceConverterAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color.ToHSBColorSpaceConverterAlgorithm

toHtmlElement(JIPipeDependency) - Static method in interface org.hkijena.jipipe.JIPipeDependency

Exports the dependency to an HTML element (without the root tag)

toImage(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.LUTData

Renders the LUT into an RGB Image

toImagejAxes(String) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.ImgUtils

Convert string with chars from ImgUtils.DEFAULT_STRING_AXES to axes from ImgUtils.DEFAULT_AXES.

toImagePlus(boolean, int) - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

toImagePlus() - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

toImagePlus(opencv_core.Mat) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

toIndexedMeshGeometry(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DUnindexedMeshGeometry

Converts this unindexed mesh geometry into an optimized, indexed mesh geometry

toInputSlotAnnotation() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

Converts this info into the annotation form.

ToIntegerFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.convert

ToIntegerFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.convert.ToIntegerFunction

toJson(JsonGenerator) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

toJson(JsonGenerator) - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration

Saves this configuration to JSON.

toJson(JsonGenerator) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Saves this algorithm to JSON.

toJson(JsonGenerator) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Writes the project to JSON

toJson() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotDetectorData

toJson() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotTrackerData

ToJsonFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.convert

ToJsonFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.convert.ToJsonFunction

toJsonString(Object) - Static method in class org.hkijena.jipipe.utils.json.JsonUtils

Token(JIPipeExpressionCustomASTParser.TokenType, String) - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.Token

TokenIterator(List<JIPipeExpressionCustomASTParser.Token>) - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.TokenIterator

tokenize(String, boolean, boolean) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

tokenize(String) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

tokens - Variable in class org.hkijena.jipipe.api.nodes.database.WeightedTokens

ToLABColorSpaceConverterAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color

ToLABColorSpaceConverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color.ToLABColorSpaceConverterAlgorithm

ToLABColorSpaceConverterAlgorithm(ColorSpaceConverterAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color.ToLABColorSpaceConverterAlgorithm

toLabels(ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

toLabels(ImagePlus, boolean, boolean, int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

toLabels2(ImagePlus, boolean, boolean, int, int, boolean, boolean, boolean, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

toList() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration

toListModel(Collection<T>) - Static method in class org.hkijena.jipipe.utils.UIUtils

toLoginCredentials() - Method in class org.hkijena.jipipe.plugins.omero.OMEROCredentialsEnvironment

Converts the credentials into a SciJava OMERO location

toLUT() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.LUTData

Converts the LUT into an ImageJ LUT

toLUT() - Method in enum org.hkijena.jipipe.plugins.parameters.library.colors.ColorMap

Converts the color map into an ImageJ LUT

toMarkdown() - Method in class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLText

toMask(ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

toMask(ImagePlus, boolean, boolean, int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

toMask(Margin, boolean, boolean, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Generates a mask image from pure ROI data.

toMask(int, int, boolean, boolean, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Generates a mask image from pure ROI data.

toMask(ImagePlus, boolean, boolean, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Converts this ROI list into a mask that has the same size as the reference image

toMask(boolean, boolean, int, int, int, int, int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Converts this ROI list into a mask that has the same size as the reference image

toMask(opencv_core.Mat) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

toMat(ImageProcessor) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

toMeshGeometry(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DIndexedMeshGeometry

toMeshGeometry(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DLineGeometry

toMeshGeometry(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DSphereGeometry

toMeshGeometry(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DUnindexedMeshGeometry

toMeshGeometry(JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.plugins.scene3d.model.Scene3DGeometry

Returns a mesh equivalent of this geometry

toNormalizedVector3d() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.Point3d

ToNumber2Function - Class in org.hkijena.jipipe.plugins.expressions.functions.convert

ToNumber2Function() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.convert.ToNumber2Function

ToNumberFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.convert

ToNumberFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.convert.ToNumberFunction

ToNumericColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Sorts the items ascending

ToNumericColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.ToNumericColumnOperation

toolAllowLeftMouseDrag() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MouseMaskDrawer2DTool

toolAllowLeftMouseDrag() - Method in interface org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2DTool

Returns true if left mouse dragging should be allowed

ToolChangedEvent(ImageViewerPanelCanvas2D, ImageViewerPanelCanvas2DTool, ImageViewerPanelCanvas2DTool) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.ToolChangedEvent

ToolChangedEventEmitter() - Constructor for class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.ToolChangedEventEmitter

toolIsActive() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawer2DTool

toolIsActive(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MouseMaskDrawer2DTool

toolIsActive(ImageViewerPanelCanvas2D) - Method in interface org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2DTool

Returns true if the tool is active

ToolsPlugin - Class in org.hkijena.jipipe.plugins.tools

Extension containing some additional tools

ToolsPlugin() - Constructor for class org.hkijena.jipipe.plugins.tools.ToolsPlugin

TooltipUtils - Class in org.hkijena.jipipe.utils

Utilities that generate tooltips or other text from JIPipe data data structures

toOutputSlotAnnotation() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo

Converts this info into the annotation form.

TOP_BOTTOM - Static variable in class org.hkijena.jipipe.utils.JIPipeDesktopSplitPane

toParam() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SIFTParameters

toParam() - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleBUnwarpJParameters

toParameterAccess() - Method in class org.hkijena.jipipe.desktop.commons.components.parameters.JIPipeDesktopDynamicParameterEditorDialog.ParameterEntry

toParameterString(Object...) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Converts a list of parameters into a space-delimited

toPath() - Method in class org.hkijena.jipipe.plugins.filesystem.dataypes.PathData

toPlainText() - Method in class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLText

toPopulation() - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

toPopulation(int, int) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

toPrettyJsonString(Object) - Static method in class org.hkijena.jipipe.utils.json.JsonUtils

toProcessor(opencv_core.Mat) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

toPython() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

Converts this table into its equivalent Python form (as dictionary of columns)

toReport() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry

ToRGBColorSpaceConverterAlgorithm - Class in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color

ToRGBColorSpaceConverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color.ToRGBColorSpaceConverterAlgorithm

ToRGBColorSpaceConverterAlgorithm(ColorSpaceConverterAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color.ToRGBColorSpaceConverterAlgorithm

toRGBImage(Margin, ROIElementDrawingMode, ROIElementDrawingMode, int, Color, Color) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

Generates an RGB image from pure ROI data.

toRoi(boolean, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

toRoi2D(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

toRoi2D(ImageSliceIndex, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

toRoi3D(boolean, boolean, int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

toSafeZeroIndex(ImagePlus, ImageSliceIndex) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Converts a zero-based slice index to a safe index that can be found within the image

toScene3D(boolean, boolean, boolean, Quantity.LengthUnit, boolean, float, float, Color, Color, String) - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

toSciJavaVector3d() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.Point3d

toString() - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataAnnotation

toString() - Method in enum org.hkijena.jipipe.api.annotation.JIPipeDataAnnotationMergeMode

toString() - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation

toString() - Method in enum org.hkijena.jipipe.api.annotation.JIPipeTextAnnotationMergeMode

toString() - Method in class org.hkijena.jipipe.api.artifacts.JIPipeArtifact

toString() - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache

toString() - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters

toString() - Method in class org.hkijena.jipipe.api.compat.ImageJImportParameters

toString() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo

toString() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot

toString() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

toString() - Method in class org.hkijena.jipipe.api.data.JIPipeEmptyData

toString() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage

toString() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage

toString() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPWriteDataStorage

toString() - Method in class org.hkijena.jipipe.api.environments.JIPipeProcessArtifactEnvironment

toString() - Method in enum org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm.IterationMode

toString() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata.List

toString() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata

toString() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

toString() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep

toString() - Method in enum org.hkijena.jipipe.api.nodes.JIPipeColumMatching

toString() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

toString() - Method in enum org.hkijena.jipipe.api.nodes.JIPipeTextAnnotationMatchingMethod

toString() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification

toString() - Method in class org.hkijena.jipipe.api.registries.JIPipeJavaNodeRegistrationTask

toString() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph

toString() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph

toString() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunPartitionGraph

toString() - Method in enum org.hkijena.jipipe.api.run.JIPipeGraphRunPartitionInheritedBoolean

toString() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry

toString() - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstallerPackage

toString() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.layout.MSTGraphAutoLayoutImplementation.Edge

toString() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.layout.MSTGraphAutoLayoutImplementation.Node

toString() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.triggers.JIPipeDesktopGraphNodeUISlotActiveArea

toString() - Method in enum org.hkijena.jipipe.desktop.app.grapheditor.JIPipeGraphViewMode

toString() - Method in class org.hkijena.jipipe.desktop.app.project.templatedownloader.JIPipeDesktopProjectTemplateDownloaderPackage

toString() - Method in class org.hkijena.jipipe.desktop.commons.components.filechoosernext.CommonDirectory

toString() - Method in enum org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopUITheme

toString() - Method in enum org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactAccelerationPreference

toString() - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeModelData

toString() - Method in class org.hkijena.jipipe.plugins.cellpose.datatypes.CellposeSizeModelData

toString() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.datatypes.LegacyCellposeModelData

Deprecated.

toString() - Method in class org.hkijena.jipipe.plugins.cellpose.legacy.datatypes.LegacyCellposeSizeModelData

Deprecated.

toString() - Method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp2.PretrainedCellpose2SegmentationModel

toString() - Method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseType

toString() - Method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp3.PretrainedCellpose3DenoiseModel

toString() - Method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp3.PretrainedCellpose3SegmentationModel

toString() - Method in enum org.hkijena.jipipe.plugins.clij2.CLIJSplitMode

toString() - Method in class org.hkijena.jipipe.plugins.clij2.datatypes.CLIJImageData

toString() - Method in class org.hkijena.jipipe.plugins.dataenvironment.JIPipeDataDirectoryEnvironment

toString() - Method in class org.hkijena.jipipe.plugins.expressions.AbstractExpressionParameter

toString() - Method in enum org.hkijena.jipipe.plugins.expressions.TableColumnSourceExpressionParameter.TableSourceType

toString() - Method in enum org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderParameterUI.Mode

toString() - Method in class org.hkijena.jipipe.plugins.filesystem.dataypes.PathData

toString() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.BooleanFormData

toString() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.DoubleFormData

toString() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.EnumFormData

toString() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.IntegerFormData

toString() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.ParameterFormData

toString() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

toString() - Method in class org.hkijena.jipipe.plugins.forms.datatypes.StringFormData

toString() - Method in class org.hkijena.jipipe.plugins.ij3d.datatypes.ROI3DListData

toString() - Method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurement

toString() - Method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DOutline

toString() - Method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurement

toString() - Method in class org.hkijena.jipipe.plugins.ijfilaments.datatypes.Filaments3DGraphData

toString() - Method in class org.hkijena.jipipe.plugins.ijfilaments.util.Point3d

toString() - Method in enum org.hkijena.jipipe.plugins.ijmultitemplatematching.TemplateMatchingMethod

toString() - Method in enum org.hkijena.jipipe.plugins.ijocr.utils.TesseractOCREngineMode

toString() - Method in enum org.hkijena.jipipe.plugins.ijocr.utils.TesseractPageSegmentationMethod

toString() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotDetectorData

toString() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotsCollectionData

toString() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.SpotTrackerData

toString() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

toString() - Method in enum org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer.StrokeColorMode

toString() - Method in class org.hkijena.jipipe.plugins.ijweka.datatypes.WekaModelData

toString() - Method in enum org.hkijena.jipipe.plugins.ijweka.parameters.features.WekaFeature2D

toString() - Method in enum org.hkijena.jipipe.plugins.ijweka.parameters.features.WekaFeature3D

toString() - Method in class org.hkijena.jipipe.plugins.ilastik.datatypes.IlastikModelData

toString() - Method in enum org.hkijena.jipipe.plugins.ilastik.parameters.IlastikProjectValidationMode

toString() - Method in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetDescription

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.ImageJ2DatasetData

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.BorderImageJ2OutOfBoundsFactoryData

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.ByteConstantValueImageJ2OutOfBoundsFactoryData

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.DoubleConstantValueImageJ2OutOfBoundsFactoryData

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.FloatConstantValueImageJ2OutOfBoundsFactoryData

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.IntegerConstantValueImageJ2OutOfBoundsFactoryData

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.LongConstantValueImageJ2OutOfBoundsFactoryData

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.constant.ShortConstantValueImageJ2OutOfBoundsFactoryData

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.EmptyImageJ2OutOfBoundsFactory

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.MirrorImageJ2OutOfBoundsFactoryData

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.outofbounds.PeriodicImageJ2OutOfBoundsFactoryData

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.DiamondImageJ2ShapeData

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.DiamondTipsImageJ2ShapeData

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.EmptyImageJ2ShapeData

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.HyperSphereImageJ2ShapeData

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.PairOfPointsImageJ2ShapeData

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData

toString() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.shapes.RectangleImageJ2ShapeData

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.CycleRemovalMethod

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.EndRemovalMethod

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarPosition

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm.Method

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.HoughLinesNMSAlgorithm

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm.Mode

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm.Method

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking.SetToContentAwareAlgorithm.Method

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm.Operand

Deprecated.

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm.Operation

Deprecated.

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DAlgorithm.Operand

Deprecated.

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm.Attribute

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm.Operation

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm.Operation

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm.Mode

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.bunwarpj.BUnwarpJMode

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm.Anchor

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurement

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm.SliceThresholdMode

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.ImageROITargetArea

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.Neighborhood2D

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.Neighborhood2D3D

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.Neighborhood3D

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OverlapStatistics

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJGradientOperator

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJVectorFieldType

toString() - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationType

toString() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm.Compression

toString() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm.OutputFormat

toString() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImageJSampleAlgorithm.Sample

toString() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.GreyscaleColorSpace

toString() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.HSBColorSpace

toString() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.IgnoreColorSpace

toString() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.LABColorSpace

toString() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.colorspace.RGBColorSpace

toString() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.color.ImagePlusColorData

toString() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorData

toString() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorData

toString() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorData

toString() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorData

toString() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ImagePlusData

toString() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.OMEImageData

toString() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.ROI2DListData

toString() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.BitDepth

toString() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.HyperstackDimension

toString() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageBlendMode

toString() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

toString() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.RoiRelationMeasurement

toString() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.OptionalBitDepth

toString() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIElementDrawingMode

toString() - Method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiOutline

toString() - Method in class org.hkijena.jipipe.plugins.imp.datatypes.ImpImageData

toString() - Method in class org.hkijena.jipipe.plugins.multiparameters.datatypes.ParametersData

toString() - Method in class org.hkijena.jipipe.plugins.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage

toString() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROAnnotationReferenceData

toString() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMERODatasetReferenceData

toString() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROGroupReferenceData

toString() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROImageReferenceData

toString() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROPlateReferenceData

toString() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROProjectReferenceData

toString() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROScreenReferenceData

toString() - Method in class org.hkijena.jipipe.plugins.omero.datatypes.OMEROWellReferenceData

toString() - Method in enum org.hkijena.jipipe.plugins.omnipose.parameters.PretrainedOmnipose0Model

toString() - Method in class org.hkijena.jipipe.plugins.opencv.datatypes.OpenCvImageData

toString() - Method in class org.hkijena.jipipe.plugins.parameters.api.functions.FunctionParameter

toString() - Method in class org.hkijena.jipipe.plugins.parameters.api.matrix.Matrix2D

toString() - Method in class org.hkijena.jipipe.plugins.parameters.api.optional.OptionalParameter

toString() - Method in class org.hkijena.jipipe.plugins.parameters.api.pairs.PairParameter

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.jipipe.JIPipeArtifactQueryParameter

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLText

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtraction

toString() - Method in enum org.hkijena.jipipe.plugins.parameters.library.primitives.FontStyleParameter

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRange

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2dParameter

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2iParameter

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3dParameter

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3iParameter

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.IconRef

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExporterRef

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataExportOperationRef

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImporterRef

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.ImageJDataImportOperationRef

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeDataInfoRef

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeNodeInfoRef

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.references.JIPipeParameterTypeInfoRef

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.FixedMargin

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.InnerMargin

toString() - Method in class org.hkijena.jipipe.plugins.parameters.library.roi.Margin

toString() - Method in enum org.hkijena.jipipe.plugins.parameters.library.util.LogicalOperation

toString() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

toString() - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotDataSeries

toString() - Method in class org.hkijena.jipipe.plugins.processes.ProcessEnvironment

toString() - Method in class org.hkijena.jipipe.plugins.python.PythonEnvironment

toString() - Method in enum org.hkijena.jipipe.plugins.python.PythonEnvironmentType

toString() - Method in class org.hkijena.jipipe.plugins.python.PythonUtils.RawPythonCode

toString() - Method in enum org.hkijena.jipipe.plugins.r.algorithms.ImportRDatasetAlgorithm.Dataset

toString() - Method in class org.hkijena.jipipe.plugins.scene3d.datatypes.Scene3DData

toString() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DIndexedMeshGeometry

toString() - Method in class org.hkijena.jipipe.plugins.scene3d.model.geometries.Scene3DUnindexedMeshGeometry

toString() - Method in class org.hkijena.jipipe.plugins.strings.StringData

toString() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.AnnotationTableData

toString() - Method in class org.hkijena.jipipe.plugins.tables.datatypes.ResultsTableData

toString() - Method in enum org.hkijena.jipipe.plugins.tables.datatypes.TableColumnNormalization

toString() - Method in class org.hkijena.jipipe.plugins.tables.nodes.statistics.IndexedDoublePoint

toString() - Method in enum org.hkijena.jipipe.utils.ImageJCalibrationMode

toString() - Method in enum org.hkijena.jipipe.utils.PathType

toString() - Method in class org.hkijena.jipipe.utils.scripting.MacroFlag

toString() - Method in class org.hkijena.jipipe.utils.scripting.MacroSetting

toStringAxes(List<AxisType>) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.ImgUtils

Convert axes from ImgUtils.DEFAULT_AXES to string with chars from ImgUtils.DEFAULT_STRING_AXES.

ToStringColumnOperation - Class in org.hkijena.jipipe.plugins.tables.operations.converting

Sorts the items ascending

ToStringColumnOperation() - Constructor for class org.hkijena.jipipe.plugins.tables.operations.converting.ToStringColumnOperation

ToStringFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.convert

ToStringFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.convert.ToStringFunction

toType(opencv_core.Mat, OpenCvType, OpenCvType...) - Static method in class org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

toUpdateSite() - Method in class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency

toValue(String, Object) - Method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

toWeakCopy() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable

Creates a copy of this data table that contains only JIPipeWeakDataReferenceData data and data annotations (If any data is already weak, it is left as-is)

TrackCollectionData - Class in org.hkijena.jipipe.plugins.ijtrackmate.datatypes

TrackCollectionData(Model, Settings, ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

TrackCollectionData(ModelData) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

TrackDrawer - Class in org.hkijena.jipipe.plugins.ijtrackmate.utils

TrackDrawer() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

TrackDrawer(TrackDrawer) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer

TrackDrawer.StrokeColorMode - Enum in org.hkijena.jipipe.plugins.ijtrackmate.utils

TrackFeature - Class in org.hkijena.jipipe.plugins.ijtrackmate.parameters

TrackFeature() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeature

TrackFeature(TrackFeature) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeature

TrackFeature(String) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeature

TrackFeature.Deserializer - Class in org.hkijena.jipipe.plugins.ijtrackmate.parameters

TrackFeatureFilterParameter - Class in org.hkijena.jipipe.plugins.ijtrackmate.parameters

TrackFeatureFilterParameter() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeatureFilterParameter

TrackFeatureFilterParameter(TrackFeature, double, boolean) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeatureFilterParameter

TrackFeatureFilterParameter(TrackFeatureFilterParameter) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeatureFilterParameter

TrackFeatureFilterParameter.List - Class in org.hkijena.jipipe.plugins.ijtrackmate.parameters

TrackFeatureVariablesInfo - Class in org.hkijena.jipipe.plugins.ijtrackmate.utils

TrackFeatureVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackFeatureVariablesInfo

TrackFilterNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks

TrackFilterNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.TrackFilterNode

TrackFilterNode(TrackFilterNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.TrackFilterNode

TrackingNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks

TrackingNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.TrackingNode

TrackingNode(TrackingNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.TrackingNode

trackKeyToVariable(String) - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackSpotFeatureVariablesInfo

TrackListCellRenderer - Class in org.hkijena.jipipe.plugins.ijtrackmate.display.tracks

TrackListCellRenderer(TracksManagerPlugin2D) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TrackListCellRenderer

TrackmateLegacyCacheDataViewerWindow - Class in org.hkijena.jipipe.plugins.ijtrackmate.display.algorithms

Cached viewer for

TrackmateLegacyCacheDataViewerWindow(JIPipeDesktopWorkbench, JIPipeDataTableDataSource, String, boolean) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.display.algorithms.TrackmateLegacyCacheDataViewerWindow

TrackMatePlugin - Class in org.hkijena.jipipe.plugins.ijtrackmate

TrackMatePlugin() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.TrackMatePlugin

TrackMateUtils - Class in org.hkijena.jipipe.plugins.ijtrackmate.utils

TrackMateUtils() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackMateUtils

TrackRenderer(ImageViewer2DDisplayRangeControl) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.TrackRenderer

TrackRenderer() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI.TrackRenderer

TrackSchemeLegacyCacheDataViewerWindow - Class in org.hkijena.jipipe.plugins.ijtrackmate.display.trackscheme

TrackSchemeLegacyCacheDataViewerWindow(JIPipeDesktopWorkbench, JIPipeDataTableDataSource, String) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.display.trackscheme.TrackSchemeLegacyCacheDataViewerWindow

TrackSchemeRendererNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks

TrackSchemeRendererNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.TrackSchemeRendererNode

TrackSchemeRendererNode(TrackSchemeRendererNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.TrackSchemeRendererNode

TracksManagerPlugin2D - Class in org.hkijena.jipipe.plugins.ijtrackmate.display.tracks

TracksManagerPlugin2D(JIPipeDesktopLegacyImageViewer) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TracksManagerPlugin2D

TracksManagerPlugin2D.SelectionContextPanel - Class in org.hkijena.jipipe.plugins.ijtrackmate.display.tracks

TracksManagerPlugin2D.SelectionInfoContextPanel - Class in org.hkijena.jipipe.plugins.ijtrackmate.display.tracks

TrackSpotFeatureVariablesInfo - Class in org.hkijena.jipipe.plugins.ijtrackmate.utils

TrackSpotFeatureVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackSpotFeatureVariablesInfo

TracksSpotsDataViewer - Class in org.hkijena.jipipe.plugins.ijtrackmate.viewers

TracksSpotsDataViewer(JIPipeDesktopDataViewerWindow) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.viewers.TracksSpotsDataViewer

TracksToRGBNode - Class in org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks

TracksToRGBNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.TracksToRGBNode

TracksToRGBNode(TracksToRGBNode) - Constructor for class org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks.TracksToRGBNode

trackToROIList(int) - Method in class org.hkijena.jipipe.plugins.ijtrackmate.datatypes.TrackCollectionData

trackVariableToKey(String) - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackSpotFeatureVariablesInfo

transferFromJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.DataSlotModuleInput

transferFromJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.DataSlotModuleOutput

transferFromJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ModuleItem, Module, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.plugins.imagej2.io.ImageJ2ModuleIO

Transfers data from JIPipe into the module

transferFromJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.ParameterImageJ2ModuleInput

transferFromJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput

transferFromJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.io.ServiceImageJ2ModuleIO

transferToJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ParametersData, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.input.DataSlotModuleInput

transferToJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ParametersData, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.io.data.output.DataSlotModuleOutput

transferToJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ParametersData, ModuleItem, Module, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.plugins.imagej2.io.ImageJ2ModuleIO

Transfers data from JIPipe from the module

transferToJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ParametersData, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.input.ParameterImageJ2ModuleInput

transferToJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ParametersData, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput

transferToJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ParametersData, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.imagej2.io.ServiceImageJ2ModuleIO

TransformArrayFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.statistics

TransformArrayFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.statistics.TransformArrayFunction

TransformCrop2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

Wrapper around ImageProcessor

TransformCrop2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm

Instantiates a new node type.

TransformCrop2DAlgorithm(TransformCrop2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm

Instantiates a new node type.

transformDims(Img<T>, List<AxisType>) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.ImgUtils

ImgUtils.transformDims(net.imglib2.img.Img<T>, java.util.List<net.imagej.axis.AxisType>) to ImgUtils.DEFAULT_AXES.

transformDims(Img<T>, List<AxisType>, List<AxisType>) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.ImgUtils

Change dimensions of the image with the given source axes to match destination axes.

TransformEqualCanvasSize2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

TransformEqualCanvasSize2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm

TransformEqualCanvasSize2DAlgorithm(TransformEqualCanvasSize2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm

TransformEqualizeDimensionsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

TransformEqualizeDimensionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm

TransformEqualizeDimensionsAlgorithm(TransformEqualizeDimensionsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm

TransformEqualizeDimensionsToMaxAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

TransformEqualizeDimensionsToMaxAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

TransformEqualizeDimensionsToMaxAlgorithm(TransformEqualizeDimensionsToMaxAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsToMaxAlgorithm

TransformExpandCanvas2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

TransformExpandCanvas2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm

TransformExpandCanvas2DAlgorithm(TransformExpandCanvas2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm

TransformFlip2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

Wrapper around ImageProcessor

TransformFlip2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformFlip2DAlgorithm

Instantiates a new node type.

TransformFlip2DAlgorithm(TransformFlip2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformFlip2DAlgorithm

Instantiates a new node type.

TransformFlip2DAlgorithm.FlipMode - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

Available ways to flip an image

transformImage2D(ImagePlus, int, int, TurboRegTransformationType, double[][], double[][]) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegUtils

transformImage2DSimple(ImagePlus, int, int, TurboRegTransformationType, double[][], double[][]) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegUtils

Variant of transformImage2D that can handle RGB

TransformRotate2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

Wrapper around ImageProcessor

TransformRotate2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm

Instantiates a new node type.

TransformRotate2DAlgorithm(TransformRotate2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm

Instantiates a new node type.

TransformRotate2DAlgorithm.RotationMode - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

Available ways to flip an image

TransformRotateFree2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

Wrapper around ImageProcessor

TransformRotateFree2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm

Instantiates a new node type.

TransformRotateFree2DAlgorithm(TransformRotateFree2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm

TransformScale2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

Wrapper around ImageProcessor

TransformScale2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

Instantiates a new node type.

TransformScale2DAlgorithm(TransformScale2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm

Instantiates a new node type.

TransformScale3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

Wrapper around ImageProcessor

TransformScale3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm

Instantiates a new node type.

TransformScale3DAlgorithm(TransformScale3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm

Instantiates a new node type.

TransformSetHyperstackDimensionsAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

TransformSetHyperstackDimensionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm

TransformSetHyperstackDimensionsAlgorithm(TransformSetHyperstackDimensionsAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm

TRANSPARENT - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopDarkModernMetalTheme

TRANSPARENT - Static variable in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopModernMetalTheme

TRANSPARENT_BACKGROUND - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Flag that makes the backgrounds of the components transparent (non-opaque) if possible

traverse() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Traverses the graph in topological order.

traverse() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportContext

traverseNavigable() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportContext

traverseSlots() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph

Traverses the graph in topological order.

TriConsumer<T,U,V> - Interface in org.hkijena.jipipe.utils

TriggerBackupAllTool - Class in org.hkijena.jipipe.plugins.dev

TriggerBackupAllTool(JIPipeDesktopWorkbench) - Constructor for class org.hkijena.jipipe.plugins.dev.TriggerBackupAllTool

Creates a new instance

triggerChangedEvent() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup

triggerSlotConfigurationChangedEvent() - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration

tryDequeue() - Method in class org.hkijena.jipipe.api.run.JIPipeRunnableQueue

Attempts to run a scheduled run

tryFindProjectWorkbench(JIPipeGraph, JIPipeWorkbench) - Static method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

Attempts to find a workbench

tryGetIntegers(int, int, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRange

Generates the list of integers based on the value.

tryGetWebClientURL(String, String, long) - Static method in class org.hkijena.jipipe.plugins.omero.util.OMEROUtils

tryParseDouble(String, double) - Static method in class org.hkijena.jipipe.utils.StringUtils

tryParseDoubleOrReturnString(String) - Static method in class org.hkijena.jipipe.utils.StringUtils

Attempts to parse a string as double.

tryResolveToKnownDependencies(Set<JIPipeDependency>) - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

Resolves as many dependencies in the provided set against a known dependency, so there is access to other metadata.

trySetInputSlotOrder(List<String>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Sets the input slot order.

trySetOutputSlotOrder(List<String>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration

Sets the output slot order.

TSOAX2DAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.generate

TSOAX2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAX2DAlgorithm

TSOAX2DAlgorithm(TSOAX2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAX2DAlgorithm

TSOAX3DAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.generate

TSOAX3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAX3DAlgorithm

TSOAX3DAlgorithm(TSOAX3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAX3DAlgorithm

TSOAXAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.generate

TSOAXAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

TSOAXAlgorithm(TSOAXAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXAlgorithm

TSOAXApplicationSettings - Class in org.hkijena.jipipe.plugins.ijfilaments.settings

TSOAXApplicationSettings() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.settings.TSOAXApplicationSettings

TSOAXConvergenceParameters - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.generate

TSOAXConvergenceParameters() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXConvergenceParameters

TSOAXConvergenceParameters(TSOAXConvergenceParameters) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXConvergenceParameters

TSOAXEnvironment - Class in org.hkijena.jipipe.plugins.ijfilaments.environments

Parameter that describes a TSOAX environment

TSOAXEnvironment() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.environments.TSOAXEnvironment

TSOAXEnvironment(TSOAXEnvironment) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.environments.TSOAXEnvironment

TSOAXEnvironment.List - Class in org.hkijena.jipipe.plugins.ijfilaments.environments

A list of TSOAXEnvironment

TSOAXEvolutionParameters - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.generate

TSOAXEvolutionParameters() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

TSOAXEvolutionParameters(TSOAXEvolutionParameters) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXEvolutionParameters

TSOAXInitializationParameters - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.generate

TSOAXInitializationParameters() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXInitializationParameters

TSOAXInitializationParameters(TSOAXInitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXInitializationParameters

TSOAXResultAnalysisAlgorithm - Class in org.hkijena.jipipe.plugins.ijfilaments.nodes.generate

TSOAXResultAnalysisAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXResultAnalysisAlgorithm

TSOAXResultAnalysisAlgorithm(TSOAXResultAnalysisAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.nodes.generate.TSOAXResultAnalysisAlgorithm

TSOAXUtils - Class in org.hkijena.jipipe.plugins.ijfilaments.util

TSOAXUtils() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.util.TSOAXUtils

TurboRegImage - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg

Customized copy of TurboRegImage (package private)

TurboRegImage(ImagePlus, TurboRegTransformationType, boolean) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegImage

Converts the pixel array of the incoming ImagePlus object into a local float array.

TurboRegMask - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg

Customized copy of TurboRegMask (package private)

TurboRegMask(ImagePlus) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegMask

Converts the pixel array of the incoming ImagePlus object into a local boolean array.

TurboRegPointHandler - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg

TurboRegPointHandler(double[][], TurboRegTransformationType) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegPointHandler

Keep a local copy of the points and of the transformation.

TurboRegPointHandler(ImagePlus, TurboRegTransformationType) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegPointHandler

Keep a local copy of the ImagePlus object.

TurboRegRegistration2DReferencedAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg

Port of Register_Virtual_Stack_MT

TurboRegRegistration2DReferencedAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DReferencedAlgorithm

TurboRegRegistration2DReferencedAlgorithm(TurboRegRegistration2DReferencedAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DReferencedAlgorithm

TurboRegRegistration2DSingleAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg

Port of Register_Virtual_Stack_MT

TurboRegRegistration2DSingleAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DSingleAlgorithm

TurboRegRegistration2DSingleAlgorithm(TurboRegRegistration2DSingleAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistration2DSingleAlgorithm

TurboRegRegistrationAlgorithmRule - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg

TurboRegRegistrationAlgorithmRule() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistrationAlgorithmRule

TurboRegRegistrationAlgorithmRule(TurboRegRegistrationAlgorithmRule) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistrationAlgorithmRule

TurboRegRegistrationAlgorithmRuleType - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg

TurboRegResult - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg

TurboRegResult() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegResult

TurboRegTransformationInfo - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg

TurboRegTransformationInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo

TurboRegTransformationInfo(TurboRegTransformationInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationInfo

TurboRegTransformationInfo.Entry - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg

TurboRegTransformationType - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg

TurboRegTransformer - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg

TurboRegTransformer(TurboRegImage, TurboRegMask, TurboRegPointHandler, TurboRegImage, TurboRegMask, TurboRegPointHandler, TurboRegTransformationType, boolean, boolean) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformer

Keep a local copy of most everything.

TurboRegUtils - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg

TurboRegUtils() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegUtils

type - Variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.Token

type - Variable in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetDescription

Type of the dataset.

type(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageScienceUtils

U

UI_ORDER_DEFAULT - Static variable in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

UI_ORDER_PINNED - Static variable in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

UI_PADDING - Static variable in class org.hkijena.jipipe.utils.UIUtils

uiImportParameterFromGraph(JIPipeWorkbench) - Method in class org.hkijena.jipipe.plugins.multiparameters.nodes.GeneratedParameters

UIPlotDataSeriesColumnEnum - Class in org.hkijena.jipipe.plugins.plots.parameters

Parameter that contains one selected JFreeChartPlotDataSeries item.

UIPlotDataSeriesColumnEnum() - Constructor for class org.hkijena.jipipe.plugins.plots.parameters.UIPlotDataSeriesColumnEnum

UIPlotDataSeriesColumnEnumDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.plots.parameters

Works for TableColumnData.

UIPlotDataSeriesColumnEnumDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.plots.parameters.UIPlotDataSeriesColumnEnumDesktopParameterEditorUI

UIUtils - Class in org.hkijena.jipipe.utils

Utils for UI

UIUtils() - Constructor for class org.hkijena.jipipe.utils.UIUtils

UIUtils.DragThroughMouseListener - Class in org.hkijena.jipipe.utils

UltimateErodedPoints2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary

Wrapper around EDM

UltimateErodedPoints2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.UltimateErodedPoints2DAlgorithm

Instantiates a new node type.

UltimateErodedPoints2DAlgorithm(UltimateErodedPoints2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.UltimateErodedPoints2DAlgorithm

Instantiates a new node type.

UnclosableInputStream - Class in org.hkijena.jipipe.utils

Wrapper around an OutputStream that prevents closing

UnclosableInputStream(InputStream) - Constructor for class org.hkijena.jipipe.utils.UnclosableInputStream

UnclosableOutputStream - Class in org.hkijena.jipipe.utils

Wrapper around an OutputStream that prevents closing

UnclosableOutputStream(OutputStream) - Constructor for class org.hkijena.jipipe.utils.UnclosableOutputStream

UndefinedExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.expressions.variables

Used to indicate that the list of variables are not known

UndefinedExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.expressions.variables.UndefinedExpressionParameterVariablesInfo

undo(UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal

Undo the last undo operation

unescapeString(String) - Static method in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionEvaluator

uninstall() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCachedDataDisplayCacheControl

UNIT_NO_UNIT - Static variable in class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

UNIT_PIXELS - Static variable in class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

unitIsPixels() - Method in class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

UNITS_FACTORS - Static variable in class org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity

Contains factors to the standard unit Length: m Weight: g Time: s

unload() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

UnlockNodeLocationSizeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

UnlockNodeLocationSizeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UnlockNodeLocationSizeUIContextAction

UnMeltTableAlgorithm - Class in org.hkijena.jipipe.plugins.tables.nodes.transform

UnMeltTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.transform.UnMeltTableAlgorithm

Creates a new instance

UnMeltTableAlgorithm(UnMeltTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.transform.UnMeltTableAlgorithm

Creates a copy

unpackToNodeGroup(JsonAlgorithm) - Static method in class org.hkijena.jipipe.api.grouping.JsonAlgorithm

Replaces the targeted algorithm by a JIPipeNodeGroup

UnreferencedRoiToMaskAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert

Wrapper around RoiManager

UnreferencedRoiToMaskAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm

Instantiates a new node type.

UnreferencedRoiToMaskAlgorithm(UnreferencedRoiToMaskAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm

Instantiates a new node type.

UnreferencedRoiToRGBAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert

Wrapper around RoiManager

UnreferencedRoiToRGBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

Instantiates a new node type.

UnreferencedRoiToRGBAlgorithm(UnreferencedRoiToRGBAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm

Instantiates a new node type.

unregister(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry

Removes a node from the registry

UnsetRoiImageAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Wrapper around RoiManager

UnsetRoiImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.UnsetRoiImageAlgorithm

Instantiates a new node type.

UnsetRoiImageAlgorithm(UnsetRoiImageAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.UnsetRoiImageAlgorithm

Instantiates a new node type.

UnspecifiedValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts

UnspecifiedValidationReportContext() - Constructor for class org.hkijena.jipipe.api.validation.contexts.UnspecifiedValidationReportContext

unsubscribe(Listener) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter

UnTileImage2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

UnTileImage2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm

UnTileImage2DAlgorithm(UnTileImage2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm

unwrap(Image, ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageScienceUtils

unwrap(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

update(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfoETA

Updates the ETA and logs it if needed

update(Graphics, JComponent) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopCustomTabbedPaneUI

update(Graphics, JComponent) - Method in class org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopRoundedButtonUI

update(IObservable, ImportEvent) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROUploadToJIPipeLogger

updateActiveAreas() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopAnnotationGraphNodeUI

updateActiveAreas() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

updateAnalyzer() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.ImageStatisticsSetParameter

Sends the settings to Analyzer

updateAnnotationNodeLayers() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

updateAssets() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

updateCachedArtifacts(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry

UpdateCacheNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

UpdateCacheNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheNodeUIContextAction

UpdateCacheOnlyPredecessorsNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

UpdateCacheOnlyPredecessorsNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheOnlyPredecessorsNodeUIContextAction

UpdateCacheShowIntermediateNodeUIContextAction - Class in org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu

UpdateCacheShowIntermediateNodeUIContextAction() - Constructor for class org.hkijena.jipipe.desktop.app.grapheditor.commons.contextmenu.UpdateCacheShowIntermediateNodeUIContextAction

updateChartProperties(JFreeChart) - Method in class org.hkijena.jipipe.plugins.plots.datatypes.JFreeChartPlotData

Sets properties of charts

updateColorMaps() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.spots.SpotListCellRenderer

updateColorMaps() - Method in class org.hkijena.jipipe.plugins.ijtrackmate.display.tracks.TrackListCellRenderer

updateColors() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

updateCompartmentOutputs(JIPipeProjectCompartment) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

updateContents() - Method in class org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.DocumentTabComponent

updateContextToolbar() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

UpdatedEvent(Object, JIPipeDataBrowser, String) - Constructor for class org.hkijena.jipipe.api.data.browser.JIPipeDataBrowser.UpdatedEvent

UpdatedEvent(Object, JIPipeDataTableBrowser, String) - Constructor for class org.hkijena.jipipe.api.data.browser.JIPipeDataTableBrowser.UpdatedEvent

UpdatedEvent(JIPipeNotificationInbox) - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.UpdatedEvent

UpdatedEvent(Object) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry.UpdatedEvent

UpdatedEventEmitter() - Constructor for class org.hkijena.jipipe.api.data.browser.JIPipeDataBrowser.UpdatedEventEmitter

UpdatedEventEmitter() - Constructor for class org.hkijena.jipipe.api.data.browser.JIPipeDataTableBrowser.UpdatedEventEmitter

UpdatedEventEmitter() - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.UpdatedEventEmitter

UpdatedEventEmitter() - Constructor for class org.hkijena.jipipe.api.registries.JIPipeArtifactsRegistry.UpdatedEventEmitter

updateFromCurrentSlice(boolean) - Method in class org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl

updateGraphNodeSlots() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

Synchronizes the slots with the slot definition

updateGroupSlots() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm

Updates the slots from the wrapped graph

updateHotkeyInfo() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

updateListModel() - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

updateListModel(Collection<ROI3D>) - Method in class org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

updateListModel() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

updateListModel(boolean, Collection<Roi>) - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.roimanager.ROIManagerPlugin2D

updateNotifications() - Method in class org.hkijena.jipipe.desktop.commons.notifications.JIPipeDesktopGenericNotificationInboxUI

updateNotifications() - Method in class org.hkijena.jipipe.desktop.commons.notifications.JIPipeDesktopWorkbenchNotificationInboxUI

updatePredecessorCache() - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantUI

updateRegistrationTasks() - Method in class org.hkijena.jipipe.plugins.jsonextensionloader.JsonExtensionLoaderPlugin

Tries to register more extensions waiting for dependencies

updateRenderedPreviews() - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantTableModel

updateRenderedPreviews() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableModel

updateRenderedPreviews() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedMultiDataTableModel

updateRenderedPreviews() - Method in class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopSimpleDataBatchTableModel

updateRenderedPreviews() - Method in class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerTableModel

updateRenderedPreviews() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopRowDataAnnotationMergedTableCellRenderer

updateRenderedPreviews() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopRowDataAnnotationTableCellRenderer

updateRenderedPreviews() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopRowDataMergedTableCellRenderer

updateRenderedPreviews() - Method in class org.hkijena.jipipe.desktop.app.resultanalysis.renderers.JIPipeDesktopRowDataTableCellRenderer

updateROIOrMaskSlot(ImageROITargetArea, JIPipeSlotConfiguration) - Static method in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ImageJAlgorithmUtils

updateSelection() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.AbstractJIPipeDesktopGraphEditorUI

updateSelection() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.compartments.JIPipeDesktopCompartmentsGraphEditorUI

updateSelection() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.flavors.pipeline.JIPipeDesktopPipelineGraphEditorUI

updateSelection() - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

updateSeriesList() - Method in class org.hkijena.jipipe.desktop.app.ploteditor.JIPipeDesktopPlotSeriesEditor

Updates the column parameters

updateSize() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopAnnotationGraphNodeUI

updateSize() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

Recalculates the UI size

updateSizes() - Method in class org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel

updateSlotActiveAreas() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

updateSlots() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

updateSlots() - Method in class org.hkijena.jipipe.plugins.parameters.api.graph.SlotMapParameterCollection

Method that adds missing entries, or removes invalid entries based on the algorithm's slot configuration

updateSlots() - Method in class org.hkijena.jipipe.plugins.parameters.library.graph.InputSlotMapParameterCollection

updateSlots() - Method in class org.hkijena.jipipe.plugins.parameters.library.graph.OutputSlotMapParameterCollection

updateState() - Method in class org.hkijena.jipipe.utils.CustomStateLessToggleButton

updateStatus() - Method in class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantInputPreviewPanel

updateStatus() - Method in class org.hkijena.jipipe.desktop.app.cache.JIPipeDesktopCacheManagerUI

Updates the UI status

updateStatus() - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopCompactRunnableQueueButton

Updates the UI status

updateStatus() - Method in class org.hkijena.jipipe.desktop.app.running.queue.JIPipeDesktopRunnableQueueButton

Updates the UI status

updateTitle() - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

Updates the title based on the current state

updateUI() - Method in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopAdvancedFileChooser.FileChooserComponent

updateView(boolean, boolean, boolean) - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

updateWholeNodeActiveAreas() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI

updateY(int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Returns an updated Y coordinate based on the current "Invert Y Coordinates" flag.

updateY(double, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.CustomAnalyzer

Returns an updated Y coordinate based on the current "Invert Y Coordinates" flag.

upload(Path, Set<String>, Map<String, String>, OMEROGateway, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROImageUploader

UploadOMEROImageToDatasetAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.upload

UploadOMEROImageToDatasetAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROImageToDatasetAlgorithm

UploadOMEROImageToDatasetAlgorithm(UploadOMEROImageToDatasetAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROImageToDatasetAlgorithm

UploadOMEROTableAlgorithm - Class in org.hkijena.jipipe.plugins.omero.nodes.upload

UploadOMEROTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROTableAlgorithm

UploadOMEROTableAlgorithm(UploadOMEROTableAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.omero.nodes.upload.UploadOMEROTableAlgorithm

uploadSliceToCanvas() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin2D

uploadSliceToCanvas() - Method in class org.hkijena.jipipe.plugins.imageviewer.legacy.impl.JIPipeDesktopLegacyImageViewerPanel2D

URIData - Class in org.hkijena.jipipe.plugins.strings

URIData(String) - Constructor for class org.hkijena.jipipe.plugins.strings.URIData

URIData(StringData) - Constructor for class org.hkijena.jipipe.plugins.strings.URIData

URIListDataSource - Class in org.hkijena.jipipe.plugins.filesystem.datasources

URIListDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.URIListDataSource

URIListDataSource(URIListDataSource) - Constructor for class org.hkijena.jipipe.plugins.filesystem.datasources.URIListDataSource

UsePlaceholderForMissingDataAlgorithm - Class in org.hkijena.jipipe.plugins.utils.algorithms

UsePlaceholderForMissingDataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.UsePlaceholderForMissingDataAlgorithm

UsePlaceholderForMissingDataAlgorithm(UsePlaceholderForMissingDataAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.UsePlaceholderForMissingDataAlgorithm

userCanCreate() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory

userCanCreate() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory

userCanCreate() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory

userCanCreate() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory

userCanCreate() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory

userCanCreate() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory

userCanCreate() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory

userCanCreate() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory

Returns if nodes of this category can be created by users

userCanDelete() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory

userCanDelete() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory

userCanDelete() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory

userCanDelete() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory

userCanDelete() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory

userCanDelete() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory

userCanDelete() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory

userCanDelete() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory

Returns if nodes of this category can be deleted by users

UserParameterDefinition(JIPipeDynamicParameterCollection, String, Class<?>) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.UserParameterDefinition

UtilitiesPlugin - Class in org.hkijena.jipipe.plugins.utils

UtilitiesPlugin() - Constructor for class org.hkijena.jipipe.plugins.utils.UtilitiesPlugin

V

validatePlugins(boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

Validates the plugins

validateProject(boolean) - Method in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWorkbench

Validates the project

validateUserDirectories(JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.project.JIPipeProject

Checks if the project metadata user directories are properly set up.

value() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeInputSlot

value() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeOutputSlot

value - Variable in class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.Token

value - Variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.ConcaveHullMoreiraSantos.Pair

VALUE_LABELS - Static variable in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.EdgeFeature

VALUE_LABELS - Static variable in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.SpotFeature

VALUE_LABELS - Static variable in class org.hkijena.jipipe.plugins.ijtrackmate.parameters.TrackFeature

valueOf(String) - Static method in enum org.hkijena.jipipe.api.annotation.JIPipeDataAnnotationMergeMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.api.annotation.JIPipeTextAnnotationMergeMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryOperationRun.RepositoryLockType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.api.data.JIPipeDataSlotRole

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.api.data.JIPipeSlotType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm.IterationMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.api.JIPipeGraphType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabasePipelineVisibility

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.api.nodes.JIPipeColumMatching

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.api.nodes.JIPipeGraphEdge.Shape

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.api.nodes.JIPipeGraphEdge.Visibility

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.api.nodes.JIPipeTextAnnotationMatchingMethod

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.api.notifications.JIPipeNotificationAction.Style

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.api.parameters.JIPipeParameterSerializationMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.api.run.JIPipeGraphRunPartitionInheritedBoolean

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.api.settings.JIPipeDefaultApplicationSettingsSheetCategory

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.api.settings.JIPipeDefaultProjectSettingsSheetCategory

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.api.validation.JIPipeValidationReportEntryLevel

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.desktop.api.JIPipeMenuExtensionTarget

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.EdgeMuteMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.desktop.app.grapheditor.commons.layout.JIPipepGraphAutoLayoutMethod

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI.SlotStatus

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.desktop.app.grapheditor.JIPipeGraphViewMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunNextWindow.StartPageStorageMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.desktop.commons.components.filechoosernext.CommonDirectory.DirectoryType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMessagePanel.MessageType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor.Mode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.Mode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.Mode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.CloseMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.SingletonTabMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.TabPlacement

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopUITheme

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.annotation.algorithms.SimplifyAnnotationsAlgorithm.AnnotationRemovalMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactAccelerationPreference

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.cellpose.legacy.PretrainedLegacyCellpose2InferenceModel

Deprecated.

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.cellpose.legacy.PretrainedLegacyCellpose2TrainingModel

Deprecated.

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp2.PretrainedCellpose2SegmentationModel

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp3.PretrainedCellpose3DenoiseModel

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp3.PretrainedCellpose3SegmentationModel

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.clij2.CLIJSplitMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.TokenType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.expressions.TableColumnSourceExpressionParameter.TableSourceType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderParameterUI.Mode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.forms.ui.DataBatchStatus

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm.CriteriaMethod

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm.SegmentResultsMethod

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm.ThresholdMethod

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm.SpotSegmentationMethod

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurement

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurementColumn

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DOutline

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurement

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurementColumn

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.ijfilaments.parameters.CycleFinderAlgorithm

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.ijmultitemplatematching.TemplateMatchingMethod

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.ijocr.utils.TesseractOCREngineMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.ijocr.utils.TesseractPageSegmentationMethod

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer.StrokeColorMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.ijweka.parameters.features.WekaFeature2D

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.ijweka.parameters.features.WekaFeature3D

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.ilastik.parameters.IlastikProjectValidationMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.CycleRemovalMethod

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.EndRemovalMethod

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm.BackgroundType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm.Method

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarPosition

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeChannelsAlgorithm.ChannelColor

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm.Method

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.HoughLinesNMSAlgorithm

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm.Method

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm.Mode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.FrangiVesselnessFeatures.SlicingMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm.OutputType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalFeatureContrast2DAlgorithm.Mode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter.SuppressStripesMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm.FileFormat

Deprecated.

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm.FileFormat

Deprecated.

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm.Method

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking.SetToContentAwareAlgorithm.Method

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyTransform2DAlgorithm.Transformation

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm.Operand

Deprecated.

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm.Operation

Deprecated.

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyApplyMath2DAlgorithm.Transformation

Deprecated.

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DAlgorithm.Operand

Deprecated.

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DAlgorithm.Operation

Deprecated.

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm.Attribute

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm.Operation

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm.Attribute

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm.Operation

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm.Operation

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm.Mode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.bunwarpj.BUnwarpJMaxScaleDeformation

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.bunwarpj.BUnwarpJMinScaleDeformation

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.bunwarpj.BUnwarpJMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationFeatureModel

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationModel

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistrationAlgorithmRuleType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm.RoiType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm.Anchor

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm.Mode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractROIProfileAlgorithm.RectangleMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm.Mode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurement

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementColumn

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm.DimensionOperation

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.HistogramGenerator.MultiChannelMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm.SliceThresholdMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm.Method

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.BorderMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.ScaleMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformFlip2DAlgorithm.FlipMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm.RotationMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.WrapMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.EigenvalueSelection2D

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.ImageROITargetArea

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.InterpolationMethod

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.Neighborhood2D

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.Neighborhood2D3D

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.Neighborhood3D

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OverlapStatistics

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.SourceWrapMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.LineMirror.MirrorOperationMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJGradientOperator

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJVectorFieldType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.Reslicer.Direction

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm.Compression

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm.OutputFormat

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImageJSampleAlgorithm.Sample

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportResultsTableAlgorithm.FileFormat

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEColorMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMETIFFCompression

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.AVICompression

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.BitDepth

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.HyperstackDimension

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageBlendMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.Measurement

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.MeasurementColumn

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.RoiRelationMeasurement

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.OptionalBitDepth

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIElementDrawingMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiLabel

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiOutline

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D.MaskColor

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PencilMaskDrawer2DTool.PencilShape

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.DisplayRangeStop

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.imp.datatypes.ImpImageOutputFormat

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.omnipose.legacy.parameters.LegacyOmnipose0Model

Deprecated.

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.omnipose.legacy.parameters.LegacyOmnipose0PretrainedModel

Deprecated.

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.omnipose.parameters.PretrainedOmnipose0Model

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.opencv.nodes.InpaintingAlgorithm.Method

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.opencv.utils.OpenCvBorderType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.opencv.utils.OpenCvDepth

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.opencv.utils.OpenCvType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.parameters.library.colors.ColorMap

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtraction.Mode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.parameters.library.primitives.FontStyleParameter

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.parameters.library.primitives.StringOrDouble.Mode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity.LengthUnit

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI.DisplayRangeStop

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeInvertedMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.parameters.library.roi.Anchor

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.parameters.library.util.LogicalOperation

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.parameters.library.util.SortOrder

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData.HistogramType_

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.plots.utils.ColorMap

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.python.PythonEnvironmentType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.r.algorithms.ImportRDatasetAlgorithm.Dataset

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings.FileChooserType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings.LastDirectoryKey

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.tables.ColumnContentType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.tables.datatypes.TableColumnNormalization

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.plugins.tables.nodes.statistics.DistanceMeasures

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.utils.ImageJCalibrationMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.utils.PathIOMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.utils.PathType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.utils.SizeFitMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.PanelLocation

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.PanelSide

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.hkijena.jipipe.utils.ui.ListSelectionMode

Returns the enum constant of this type with the specified name.

values() - Static method in enum org.hkijena.jipipe.api.annotation.JIPipeDataAnnotationMergeMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.api.annotation.JIPipeTextAnnotationMergeMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryOperationRun.RepositoryLockType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.api.artifacts.JIPipeArtifactRepositoryType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.api.data.JIPipeDataSlotRole

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.api.data.JIPipeSlotType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm.IterationMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.api.JIPipeGraphType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabasePipelineVisibility

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.api.nodes.JIPipeColumMatching

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.api.nodes.JIPipeGraphEdge.Shape

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.api.nodes.JIPipeGraphEdge.Visibility

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.api.nodes.JIPipeTextAnnotationMatchingMethod

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.api.notifications.JIPipeNotificationAction.Style

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.api.parameters.JIPipeParameterSerializationMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.api.run.JIPipeGraphRunPartitionInheritedBoolean

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.api.settings.JIPipeDefaultApplicationSettingsSheetCategory

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.api.settings.JIPipeDefaultProjectSettingsSheetCategory

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.api.validation.JIPipeValidationReportEntryLevel

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.desktop.api.JIPipeMenuExtensionTarget

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI.EdgeMuteMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.desktop.app.grapheditor.commons.layout.JIPipepGraphAutoLayoutMethod

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.desktop.app.grapheditor.commons.nodeui.JIPipeDesktopGraphNodeUI.SlotStatus

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.desktop.app.grapheditor.JIPipeGraphViewMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.desktop.app.running.JIPipeDesktopRunNextWindow.StartPageStorageMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.desktop.commons.components.filechoosernext.CommonDirectory.DirectoryType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopMessagePanel.MessageType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor.Mode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopDataTypePicker.Mode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.desktop.commons.components.pickers.JIPipeDesktopNodeInfoPicker.Mode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.CloseMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.SingletonTabMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.desktop.commons.components.tabs.JIPipeDesktopTabPane.TabPlacement

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.desktop.commons.theme.JIPipeDesktopUITheme

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.annotation.algorithms.SimplifyAnnotationsAlgorithm.AnnotationRemovalMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.artifacts.JIPipeArtifactAccelerationPreference

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.cellpose.legacy.PretrainedLegacyCellpose2InferenceModel

Deprecated.

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.cellpose.legacy.PretrainedLegacyCellpose2TrainingModel

Deprecated.

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp2.PretrainedCellpose2SegmentationModel

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp3.Cellpose3DenoiseTrainingNoiseType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp3.PretrainedCellpose3DenoiseModel

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.cellpose.parameters.cp3.PretrainedCellpose3SegmentationModel

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.clij2.CLIJSplitMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.TokenType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.expressions.TableColumnSourceExpressionParameter.TableSourceType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.expressions.ui.ExpressionBuilderParameterUI.Mode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.forms.ui.DataBatchStatus

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm.CriteriaMethod

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm.SegmentResultsMethod

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm.ThresholdMethod

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm.SpotSegmentationMethod

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurement

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurementColumn

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DOutline

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurement

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurementColumn

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.ijfilaments.parameters.CycleFinderAlgorithm

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.ijmultitemplatematching.TemplateMatchingMethod

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.ijocr.utils.TesseractOCREngineMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.ijocr.utils.TesseractPageSegmentationMethod

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackDrawer.StrokeColorMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.ijweka.parameters.features.WekaFeature2D

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.ijweka.parameters.features.WekaFeature3D

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.ilastik.parameters.IlastikProjectValidationMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.CycleRemovalMethod

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.EndRemovalMethod

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm.BackgroundType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm.Method

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarPosition

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color.MergeChannelsAlgorithm.ChannelColor

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm.Method

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect.HoughLinesNMSAlgorithm

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm.Method

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm.Mode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.FrangiVesselnessFeatures.SlicingMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm.OutputType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features.MorphologicalFeatureContrast2DAlgorithm.Mode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft.FFTBandPassFilter.SuppressStripesMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportImageAlgorithm.FileFormat

Deprecated.

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io.ExportTableAlgorithm.FileFormat

Deprecated.

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm.Method

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking.SetToContentAwareAlgorithm.Method

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ApplyTransform2DAlgorithm.Transformation

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm.Operand

Deprecated.

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm.Operation

Deprecated.

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyApplyMath2DAlgorithm.Transformation

Deprecated.

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DAlgorithm.Operand

Deprecated.

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.LegacyImageCalculator2DAlgorithm.Operation

Deprecated.

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm.Attribute

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm.Operation

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm.Attribute

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm.Operation

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm.Operation

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm.Mode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.bunwarpj.BUnwarpJMaxScaleDeformation

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.bunwarpj.BUnwarpJMinScaleDeformation

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.bunwarpj.BUnwarpJMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationFeatureModel

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple.SimpleImageRegistrationModel

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg.TurboRegRegistrationAlgorithmRuleType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.DrawLineOvalRectangleRoiAlgorithm.RoiType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm.Anchor

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm.Mode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure.ExtractROIProfileAlgorithm.RectangleMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm.Mode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurement

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementColumn

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm.DimensionOperation

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics.HistogramGenerator.MultiChannelMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm.SliceThresholdMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm.Method

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.BorderMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.ScaleMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformFlip2DAlgorithm.FlipMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm.RotationMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.WrapMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.EigenvalueSelection2D

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.ImageROITargetArea

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.InterpolationMethod

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.Neighborhood2D

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.Neighborhood2D3D

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.Neighborhood3D

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.OverlapStatistics

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.parameters.SourceWrapMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.LineMirror.MirrorOperationMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJGradientOperator

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.OrientationJVectorFieldType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.Reslicer.Direction

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegTransformationType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm.Compression

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ExportImagePlusAsOMEZARRAlgorithm.OutputFormat

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportImageJSampleAlgorithm.Sample

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io.ImportResultsTableAlgorithm.FileFormat

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMEColorMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.parameters.OMETIFFCompression

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.AVICompression

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.BitDepth

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.HyperstackDimension

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageBlendMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.Measurement

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.MeasurementColumn

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.RoiRelationMeasurement

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.OptionalBitDepth

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.ROIElementDrawingMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiLabel

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imagejdatatypes.util.RoiOutline

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.MaskDrawerPlugin2D.MaskColor

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imageviewer.legacy.plugins2d.maskdrawer.PencilMaskDrawer2DTool.PencilShape

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.DisplayRangeStop

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.imp.datatypes.ImpImageOutputFormat

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.omnipose.legacy.parameters.LegacyOmnipose0Model

Deprecated.

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.omnipose.legacy.parameters.LegacyOmnipose0PretrainedModel

Deprecated.

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.omnipose.parameters.PretrainedOmnipose0Model

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.opencv.nodes.InpaintingAlgorithm.Method

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.opencv.utils.OpenCvBorderType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.opencv.utils.OpenCvDepth

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.opencv.utils.OpenCvType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.parameters.library.colors.ColorMap

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.parameters.library.patterns.StringPatternExtraction.Mode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.parameters.library.primitives.FontStyleParameter

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.parameters.library.primitives.StringOrDouble.Mode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.parameters.library.quantities.Quantity.LengthUnit

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeDesktopParameterEditorUI.DisplayRangeStop

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.parameters.library.ranges.NumberRangeInvertedMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.parameters.library.roi.Anchor

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.parameters.library.util.LogicalOperation

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.parameters.library.util.SortOrder

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.plots.datatypes.HistogramJFreeChartPlotData.HistogramType_

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.plots.utils.ColorMap

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.python.PythonEnvironmentType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.r.algorithms.ImportRDatasetAlgorithm.Dataset

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings.FileChooserType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.settings.JIPipeFileChooserApplicationSettings.LastDirectoryKey

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.tables.ColumnContentType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.tables.datatypes.TableColumnNormalization

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.plugins.tables.nodes.statistics.DistanceMeasures

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.utils.ImageJCalibrationMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.utils.PathIOMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.utils.PathType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.utils.SizeFitMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.PanelLocation

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.utils.ui.JIPipeDesktopDockPanel.PanelSide

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.hkijena.jipipe.utils.ui.ListSelectionMode

Returns an array containing the constants of this enum type, in the order they are declared.

VARIABLE_ABSPATH - Static variable in class org.hkijena.jipipe.plugins.expressions.variables.PathFilterExpressionParameterVariablesInfo

VARIABLE_NAME - Static variable in class org.hkijena.jipipe.plugins.expressions.variables.PathFilterExpressionParameterVariablesInfo

VARIABLE_PARENT - Static variable in class org.hkijena.jipipe.plugins.expressions.variables.PathFilterExpressionParameterVariablesInfo

VARIABLE_PATH - Static variable in class org.hkijena.jipipe.plugins.expressions.variables.PathFilterExpressionParameterVariablesInfo

VariableExistsFunction - Class in org.hkijena.jipipe.plugins.expressions.functions

VariableExistsFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.VariableExistsFunction

VariableExistsOperator - Class in org.hkijena.jipipe.plugins.expressions.operators

VariableExistsOperator(int) - Constructor for class org.hkijena.jipipe.plugins.expressions.operators.VariableExistsOperator

VariableNode(String) - Constructor for class org.hkijena.jipipe.plugins.expressions.JIPipeExpressionCustomASTParser.VariableNode

VARIABLES - Static variable in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter.VariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings.VariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByExpression.VariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.annotation.algorithms.SetSingleAnnotation.VariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.expressions.custom.JIPipeCustomExpressionVariablesParameterVariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.expressions.JIPipeProjectDirectoriesVariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.expressions.TableColumnSourceExpressionParameter.VariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm.VariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.ij3d.utils.AllROI3DMeasurementExpressionParameterVariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.ij3d.utils.AllROI3DRelationMeasurementExpressionParameterVariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.ij3d.utils.ROI3DMeasurementExpressionParameterVariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.ij3d.utils.ROI3DRelationMeasurementExpressionParameterVariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.ijfilaments.util.AllFilamentEdgeVariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.ijfilaments.util.AllFilamentVertexVariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentEdgeVariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertexVariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelOverlapStatisticsVariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm.VariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm.VariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm.VariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm.VariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm.VariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementExpressionParameterVariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.RoiOverlapStatisticsVariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm.VariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split.SplitRoiConnectedComponentsAlgorithm.GraphPostprocessingVariables

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.AllMeasurementExpressionParameterVariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.imagejdatatypes.util.measure.MeasurementExpressionParameterVariablesInfo

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.plots.nodes.PlotTablesAlgorithm.VariablesInfo

Deprecated.

VARIABLES - Static variable in class org.hkijena.jipipe.plugins.tables.nodes.filter.FilterTablesAlgorithm.VariablesInfo

VariableSelectorList - Class in org.hkijena.jipipe.plugins.expressions

Panel that allows the user to select an ExpressionFunction

VariableSelectorList(Set<JIPipeExpressionParameterVariableInfo>) - Constructor for class org.hkijena.jipipe.plugins.expressions.VariableSelectorList

VariableSelectorList.ExpressionVariableRenderer - Class in org.hkijena.jipipe.plugins.expressions

VariablesInfo() - Constructor for class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.AnnotateByExpression.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.annotation.algorithms.SetSingleAnnotation.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.expressions.DataRowQueryExpression.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.expressions.NumericFunctionExpression.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.expressions.TableColumnSourceExpressionParameter.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.ConditionalInverterAlgorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression2DAlgorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression3DAlgorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromTableAlgorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.ranges.IntegerRange.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.plots.nodes.PlotTablesAlgorithm.VariablesInfo

Deprecated.

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.processes.ProcessEnvironment.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.filter.FilterTablesAlgorithm.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm.VariablesInfo

Deprecated.

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2.VariablesInfo

VariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.utils.algorithms.RunExpressionAlgorithm.VariablesInfo

variableToKey(String) - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.SpotFeatureVariablesInfo

variableToKey(String) - Static method in class org.hkijena.jipipe.plugins.ijtrackmate.utils.TrackFeatureVariablesInfo

Vector2dParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.vectors

Vector2dParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2dParameter

Vector2dParameter(double, double) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2dParameter

Vector2dParameter(Vector2dParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2dParameter

Vector2dParameter.List - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.vectors

Vector2iParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.vectors

Vector2iParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2iParameter

Vector2iParameter(int, int) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2iParameter

Vector2iParameter(Vector2iParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector2iParameter

Vector2iParameter.List - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.vectors

Vector2Parameter - Interface in org.hkijena.jipipe.plugins.parameters.library.primitives.vectors

Vector3dParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.vectors

Vector3dParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3dParameter

Vector3dParameter(double, double, double) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3dParameter

Vector3dParameter(Vector3dParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3dParameter

Vector3dParameter.List - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.vectors

Vector3iParameter - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.vectors

Vector3iParameter() - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3iParameter

Vector3iParameter(int, int, int) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3iParameter

Vector3iParameter(Vector3iParameter) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.Vector3iParameter

Vector3iParameter.List - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.vectors

Vector3Parameter - Interface in org.hkijena.jipipe.plugins.parameters.library.primitives.vectors

VectorAddFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.vector

VectorAddFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.vector.VectorAddFunction

VectorDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.parameters.library.primitives.vectors

VectorDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.parameters.library.primitives.vectors.VectorDesktopParameterEditorUI

VectorEuclideanNormFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.vector

VectorEuclideanNormFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.vector.VectorEuclideanNormFunction

VectorManhattanNormFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.vector

VectorManhattanNormFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.vector.VectorManhattanNormFunction

VectorMaximumNormFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.vector

VectorMaximumNormFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.vector.VectorMaximumNormFunction

VectorMultiplyScalarFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.vector

VectorMultiplyScalarFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.vector.VectorMultiplyScalarFunction

VectorNormalizeFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.vector

VectorNormalizeFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.vector.VectorNormalizeFunction

VectorParameterSettings - Annotation Type in org.hkijena.jipipe.plugins.parameters.library.primitives.vectors

VectorPixel2DExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

Variable source that allows to address x, y, and value

VectorPixel2DExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.VectorPixel2DExpressionParameterVariablesInfo

VectorPixel5DExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

Variable source that allows to address x, y, and value

VectorPixel5DExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.VectorPixel5DExpressionParameterVariablesInfo

VectorScalarProductFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.vector

VectorScalarProductFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.vector.VectorScalarProductFunction

VectorSubtractFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.vector

VectorSubtractFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.vector.VectorSubtractFunction

VectorUtils - Class in org.hkijena.jipipe.utils

VectorUtils() - Constructor for class org.hkijena.jipipe.utils.VectorUtils

verboseName - Variable in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.DatasetEntryProvider.DatasetEntry

VersionUtils - Class in org.hkijena.jipipe.utils

VersionUtils() - Constructor for class org.hkijena.jipipe.utils.VersionUtils

vertexAdded(GraphVertexChangeEvent<V>) - Method in class org.hkijena.jipipe.utils.WeakPredecessorInspector

VertexMaskParameter - Class in org.hkijena.jipipe.plugins.ijfilaments.parameters

VertexMaskParameter() - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.parameters.VertexMaskParameter

VertexMaskParameter(VertexMaskParameter) - Constructor for class org.hkijena.jipipe.plugins.ijfilaments.parameters.VertexMaskParameter

vertexRemoved(GraphVertexChangeEvent<V>) - Method in class org.hkijena.jipipe.utils.WeakPredecessorInspector

Video2DExporterRun - Class in org.hkijena.jipipe.plugins.imageviewer.legacy.runs

Video2DExporterRun(JIPipeDesktopLegacyImageViewer, Path, ImageSliceIndex, HyperstackDimension, int, AVICompression, int) - Constructor for class org.hkijena.jipipe.plugins.imageviewer.legacy.runs.Video2DExporterRun

ViewOnlyMenuItem - Class in org.hkijena.jipipe.utils.ui

ViewOnlyMenuItem() - Constructor for class org.hkijena.jipipe.utils.ui.ViewOnlyMenuItem

ViewOnlyMenuItem(Icon) - Constructor for class org.hkijena.jipipe.utils.ui.ViewOnlyMenuItem

ViewOnlyMenuItem(String) - Constructor for class org.hkijena.jipipe.utils.ui.ViewOnlyMenuItem

ViewOnlyMenuItem(Action) - Constructor for class org.hkijena.jipipe.utils.ui.ViewOnlyMenuItem

ViewOnlyMenuItem(String, Icon) - Constructor for class org.hkijena.jipipe.utils.ui.ViewOnlyMenuItem

viewToModel(float, float, Shape, Position.Bias[]) - Method in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopExtendedImageView

Provides a mapping from the view coordinate space to the logical coordinate space of the model.

VisualLocationROIProperties - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw

Limited version of ROIEditor that only contains properties for creating ROI

VisualLocationROIProperties() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualLocationROIProperties

VisualLocationROIProperties(VisualLocationROIProperties) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualLocationROIProperties

VisualROIProperties - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw

Limited version of ROIEditor that only contains properties for creating ROI

VisualROIProperties() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualROIProperties

VisualROIProperties(VisualROIProperties) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw.VisualROIProperties

VolumeOpening2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary

VolumeOpening2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.VolumeOpening2DAlgorithm

Instantiates a new node type.

VolumeOpening2DAlgorithm(VolumeOpening2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.VolumeOpening2DAlgorithm

Instantiates a new node type.

VolumeOpening3DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary

VolumeOpening3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.VolumeOpening3DAlgorithm

Instantiates a new node type.

VolumeOpening3DAlgorithm(VolumeOpening3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.VolumeOpening3DAlgorithm

Instantiates a new node type.

Voronoi2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary

Wrapper around EDM

Voronoi2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.Voronoi2DAlgorithm

Voronoi2DAlgorithm(Voronoi2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary.Voronoi2DAlgorithm

Voronoi3DAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.binary

Voronoi3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.binary.Voronoi3DAlgorithm

Voronoi3DAlgorithm(Voronoi3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.binary.Voronoi3DAlgorithm

W

waitFor() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree

walkInternalResourceFolder(String) - Static method in class org.hkijena.jipipe.utils.ResourceUtils

Iterates through all internal resources and

warn(Object, String) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROToJIPipeLogger

warn(Object, LogMessage) - Method in class org.hkijena.jipipe.plugins.omero.util.OMEROToJIPipeLogger

Warp2DAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

Warp2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.Warp2DAlgorithm

Warp2DAlgorithm(Warp2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.Warp2DAlgorithm

Watershed3DSegmentationAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.segmentation

Watershed3DSegmentationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.Watershed3DSegmentationAlgorithm

Watershed3DSegmentationAlgorithm(Watershed3DSegmentationAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.segmentation.Watershed3DSegmentationAlgorithm

Watershed3DSplittingAlgorithm - Class in org.hkijena.jipipe.plugins.ij3d.nodes.binary

Watershed3DSplittingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.binary.Watershed3DSplittingAlgorithm

Watershed3DSplittingAlgorithm(Watershed3DSplittingAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ij3d.nodes.binary.Watershed3DSplittingAlgorithm

WeakObjectSubscriber(Listener) - Constructor for class org.hkijena.jipipe.api.events.JIPipeEventEmitter.WeakObjectSubscriber

WeakPredecessorInspector<V,E> - Class in org.hkijena.jipipe.utils

Calculates the predecessor set of a vertex

WeakPredecessorInspector(Graph<V, E>) - Constructor for class org.hkijena.jipipe.utils.WeakPredecessorInspector

WeakStore<T> - Class in org.hkijena.jipipe.utils.data

A weakly owning store (using a WeakReference

WeakStore(T) - Constructor for class org.hkijena.jipipe.utils.data.WeakStore

WeakStore(WeakReference<T>) - Constructor for class org.hkijena.jipipe.utils.data.WeakStore

WebUtils - Class in org.hkijena.jipipe.utils

WebUtils() - Constructor for class org.hkijena.jipipe.utils.WebUtils

weight(double, double) - Static method in class org.hkijena.jipipe.api.nodes.database.JIPipeLegacyNodeDatabaseSearch

WEIGHT_DESCRIPTION - Static variable in class org.hkijena.jipipe.api.nodes.database.WeightedTokens

WEIGHT_MENU - Static variable in class org.hkijena.jipipe.api.nodes.database.WeightedTokens

WEIGHT_NAME - Static variable in class org.hkijena.jipipe.api.nodes.database.WeightedTokens

WeightedTokens - Class in org.hkijena.jipipe.api.nodes.database

WeightedTokens() - Constructor for class org.hkijena.jipipe.api.nodes.database.WeightedTokens

weights - Variable in class org.hkijena.jipipe.api.nodes.database.WeightedTokens

WekaClassification2DAlgorithm - Class in org.hkijena.jipipe.plugins.ijweka.nodes

WekaClassification2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijweka.nodes.WekaClassification2DAlgorithm

WekaClassification2DAlgorithm(WekaClassification2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijweka.nodes.WekaClassification2DAlgorithm

WekaClassification3DAlgorithm - Class in org.hkijena.jipipe.plugins.ijweka.nodes

WekaClassification3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijweka.nodes.WekaClassification3DAlgorithm

WekaClassification3DAlgorithm(WekaClassification3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijweka.nodes.WekaClassification3DAlgorithm

WekaClassifierDesktopParameterEditorUI - Class in org.hkijena.jipipe.plugins.ijweka.parameters

WekaClassifierDesktopParameterEditorUI(JIPipeDesktopParameterEditorUI.InitializationParameters) - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.WekaClassifierDesktopParameterEditorUI

WekaClassifierParameter - Class in org.hkijena.jipipe.plugins.ijweka.parameters

A parameter type that stores a Weka classifier

WekaClassifierParameter() - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.WekaClassifierParameter

WekaClassifierParameter(WekaClassifierParameter) - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.WekaClassifierParameter

WekaClassifierParameter.Deserializer - Class in org.hkijena.jipipe.plugins.ijweka.parameters

WekaClassifierParameter.Serializer - Class in org.hkijena.jipipe.plugins.ijweka.parameters

WekaClassifierSettings - Class in org.hkijena.jipipe.plugins.ijweka.parameters

WekaClassifierSettings() - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.WekaClassifierSettings

WekaClassifierSettings(WekaClassifierSettings) - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.WekaClassifierSettings

WekaFeature2D - Enum in org.hkijena.jipipe.plugins.ijweka.parameters.features

Enum of the standard WekaSegmentation features supported by FeatureStack

WekaFeature2DSettings - Class in org.hkijena.jipipe.plugins.ijweka.parameters.collections

Settings related to features

WekaFeature2DSettings() - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature2DSettings

WekaFeature2DSettings(WekaFeature2DSettings) - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature2DSettings

WekaFeature3D - Enum in org.hkijena.jipipe.plugins.ijweka.parameters.features

Enum of the standard WekaSegmentation features supported by FeatureStack

WekaFeature3DSettings - Class in org.hkijena.jipipe.plugins.ijweka.parameters.collections

Settings related to features

WekaFeature3DSettings() - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature3DSettings

WekaFeature3DSettings(WekaFeature3DSettings) - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaFeature3DSettings

WekaFeatureSet2D - Class in org.hkijena.jipipe.plugins.ijweka.parameters.features

Parameter that allows users to select a set of WekaFeature2D

WekaFeatureSet2D() - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.features.WekaFeatureSet2D

WekaFeatureSet2D(WekaFeatureSet2D) - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.features.WekaFeatureSet2D

WekaFeatureSet3D - Class in org.hkijena.jipipe.plugins.ijweka.parameters.features

Parameter that allows users to select a set of WekaFeature3D

WekaFeatureSet3D() - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.features.WekaFeatureSet3D

WekaFeatureSet3D(WekaFeatureSet3D) - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.features.WekaFeatureSet3D

WekaModelData - Class in org.hkijena.jipipe.plugins.ijweka.datatypes

Wrapper around Cellpose models

WekaModelData(WekaSegmentation) - Constructor for class org.hkijena.jipipe.plugins.ijweka.datatypes.WekaModelData

WekaModelData(WekaModelData) - Constructor for class org.hkijena.jipipe.plugins.ijweka.datatypes.WekaModelData

WekaModelData.Metadata - Class in org.hkijena.jipipe.plugins.ijweka.datatypes

Additional metada required for the correct deserialization of the model

WekaPlugin - Class in org.hkijena.jipipe.plugins.ijweka

WekaPlugin() - Constructor for class org.hkijena.jipipe.plugins.ijweka.WekaPlugin

WekaTiling2DSettings - Class in org.hkijena.jipipe.plugins.ijweka.parameters.collections

WekaTiling2DSettings() - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling2DSettings

WekaTiling2DSettings(WekaTiling2DSettings) - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling2DSettings

WekaTiling3DSettings - Class in org.hkijena.jipipe.plugins.ijweka.parameters.collections

WekaTiling3DSettings() - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling3DSettings

WekaTiling3DSettings(WekaTiling3DSettings) - Constructor for class org.hkijena.jipipe.plugins.ijweka.parameters.collections.WekaTiling3DSettings

WekaTrainingLabels2DAlgorithm - Class in org.hkijena.jipipe.plugins.ijweka.nodes

WekaTrainingLabels2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingLabels2DAlgorithm

WekaTrainingLabels2DAlgorithm(WekaTrainingLabels2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingLabels2DAlgorithm

WekaTrainingLabels2DAlgorithm2 - Class in org.hkijena.jipipe.plugins.ijweka.nodes

WekaTrainingLabels2DAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingLabels2DAlgorithm2

WekaTrainingLabels2DAlgorithm2(WekaTrainingLabels2DAlgorithm2) - Constructor for class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingLabels2DAlgorithm2

WekaTrainingMask2DAlgorithm - Class in org.hkijena.jipipe.plugins.ijweka.nodes

WekaTrainingMask2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingMask2DAlgorithm

WekaTrainingMask2DAlgorithm(WekaTrainingMask2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingMask2DAlgorithm

WekaTrainingMask2DAlgorithm2 - Class in org.hkijena.jipipe.plugins.ijweka.nodes

WekaTrainingMask2DAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingMask2DAlgorithm2

WekaTrainingMask2DAlgorithm2(WekaTrainingMask2DAlgorithm2) - Constructor for class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingMask2DAlgorithm2

WekaTrainingROI2DAlgorithm - Class in org.hkijena.jipipe.plugins.ijweka.nodes

WekaTrainingROI2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingROI2DAlgorithm

WekaTrainingROI2DAlgorithm(WekaTrainingROI2DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingROI2DAlgorithm

WekaTrainingROI3DAlgorithm - Class in org.hkijena.jipipe.plugins.ijweka.nodes

WekaTrainingROI3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingROI3DAlgorithm

WekaTrainingROI3DAlgorithm(WekaTrainingROI3DAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.ijweka.nodes.WekaTrainingROI3DAlgorithm

WekaUtils - Class in org.hkijena.jipipe.plugins.ijweka

WekaUtils() - Constructor for class org.hkijena.jipipe.plugins.ijweka.WekaUtils

WhereFunction - Class in org.hkijena.jipipe.plugins.expressions.functions.control

WhereFunction() - Constructor for class org.hkijena.jipipe.plugins.expressions.functions.control.WhereFunction

WHITE_TRANSPARENT - Static variable in class org.hkijena.jipipe.utils.ColorUtils

WhiteToRedTrackBackground - Class in org.hkijena.jipipe.plugins.imagejalgorithms.utils

WhiteToRedTrackBackground() - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.utils.WhiteToRedTrackBackground

width - Variable in class org.hkijena.jipipe.plugins.imagejalgorithms.utils.LegacyHoughLines

willBeActivatedOnNextStartup(String) - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

willBeDeactivatedOnNextStartup(String) - Method in class org.hkijena.jipipe.api.registries.JIPipePluginRegistry

WINDOW_CLOSED_EVENT_EMITTER - Static variable in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

WINDOW_OPENED_EVENT_EMITTER - Static variable in class org.hkijena.jipipe.desktop.app.JIPipeDesktopProjectWindow

WindowClosedEvent - Class in org.hkijena.jipipe.desktop.commons.events

Triggered when a JIPipe window was closed

WindowClosedEvent(Window) - Constructor for class org.hkijena.jipipe.desktop.commons.events.WindowClosedEvent

WindowClosedEventEmitter - Class in org.hkijena.jipipe.desktop.commons.events

WindowClosedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.commons.events.WindowClosedEventEmitter

WindowClosedEventListener - Interface in org.hkijena.jipipe.desktop.commons.events

WindowExternalEditor(JIPipeDesktopWorkbench, WeakReference<JIPipeParameterCollection>, String, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.plugins.parameters.api.scripts.ScriptDesktopParameterEditorUI.WindowExternalEditor

WindowOpenedEvent - Class in org.hkijena.jipipe.desktop.commons.events

Triggered when a window was opened

WindowOpenedEvent(Window) - Constructor for class org.hkijena.jipipe.desktop.commons.events.WindowOpenedEvent

WindowOpenedEventEmitter - Class in org.hkijena.jipipe.desktop.commons.events

WindowOpenedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.commons.events.WindowOpenedEventEmitter

WindowOpenedEventListener - Interface in org.hkijena.jipipe.desktop.commons.events

WindowQueryExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.plugins.expressions

WindowQueryExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.plugins.expressions.WindowQueryExpressionParameterVariablesInfo

WindowWatcher() - Constructor for class org.hkijena.jipipe.desktop.JIPipeDesktopMain.WindowWatcher

WITH_DIALOG_EDITOR_BUTTON - Static variable in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

WITH_DOCUMENTATION - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Flag that indicates that a documentation panel is shown.

WITH_LIMIT_WIDTH - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Flag that makes the form panel limit the width of components

WITH_PIN_TOOLBAR - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentPanel

WITH_RIBBON - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentPanel

WITH_SCROLL_BAR - Static variable in class org.hkijena.jipipe.desktop.commons.components.markup.JIPipeDesktopHTMLEditor

WITH_SCROLLING - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFormPanel

Flag that makes the content be wrapped in a JScrollPane

WITH_SEARCH_BAR - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

With this flag, there will be a search bar for parameters.

WITH_SIDEBAR - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentPanel

WITH_TOOLBAR - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopFlexContentPanel

WITHOUT_COLLAPSE - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

With this flag, collapsing is disabled

WITHOUT_LABEL_SEPARATION - Static variable in class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopParameterFormPanel

With this flag, parameters that do not show a label are not put below anymore

withoutInput() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Disables input

withoutOutput() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder

Disables output

wordWrappedHTML(String, int) - Static method in class org.hkijena.jipipe.utils.StringUtils

Create word wrapping in HTML.

wordWrappedHTMLElement(String, int) - Static method in class org.hkijena.jipipe.utils.StringUtils

Create word wrapping in HTML.

wrap(JIPipeData, JIPipeDataSource) - Static method in class org.hkijena.jipipe.api.data.sources.JIPipeDataTableDataSource

Ensures that a table data source is present.

wrap(JIPipeData, JIPipeDataSource) - Static method in class org.hkijena.jipipe.api.data.sources.JIPipeWeakDataTableDataSource

Ensures that a table data source is present.

wrap() - Method in class org.hkijena.jipipe.plugins.imagej2.datatypes.ImageJ2DatasetData

Wraps the IJ2 image to an IJ1 image data

wrap(int, int, int) - Method in enum org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform.WrapMode

wrap(ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ZARRUtils

wrap(int) - Method in class org.hkijena.jipipe.plugins.parameters.library.markup.HTMLText

Returns a copy of this text that introduces line-breaks

wrapHtml(String) - Static method in class org.hkijena.jipipe.utils.StringUtils

wrapImage(ImagePlusData) - Static method in class org.hkijena.jipipe.plugins.ij3d.IJ3DUtils

wrapInEmptyBorder(JComponent, int) - Static method in class org.hkijena.jipipe.utils.UIUtils

WrapMode - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

WrapperColumnHeaderRenderer(Store<JIPipeDataTable>) - Constructor for class org.hkijena.jipipe.desktop.app.batchassistant.JIPipeDesktopDataBatchAssistantDataTableUI.WrapperColumnHeaderRenderer

Creates a new instance

WrapperColumnHeaderRenderer(Store<JIPipeDataTable>) - Constructor for class org.hkijena.jipipe.desktop.app.datatable.JIPipeDesktopExtendedDataTableUI.WrapperColumnHeaderRenderer

Creates a new instance

WrapperColumnHeaderRenderer(Store<JIPipeDataTable>) - Constructor for class org.hkijena.jipipe.desktop.app.datatracer.JIPipeDesktopDataTracerDataTableUI.WrapperColumnHeaderRenderer

Creates a new instance

write(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage

write(String) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeWriteDataStorage

Creates an output stream that writes the specified file element.

write(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeWriteDataStorage

Creates an output stream that writes the specified file element.

write(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPWriteDataStorage

write(int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfoOutputStream

write(int) - Method in class org.hkijena.jipipe.utils.UnclosableOutputStream

writeBytes(Path, byte[]) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeWriteDataStorage

Writes a byte array

writeCalibration(ImagePlus, Map<ImageSliceIndex, DisplayRange>) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

writeCalibrationToPixels(ImageProcessor, double, double) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.BooleanFormData

writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.DoubleFormData

writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.EnumFormData

writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.FormData

This method should write any changes into the iteration step

writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.GroupHeaderFormData

writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.IntegerFormData

writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.PathFormData

writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.forms.datatypes.StringFormData

writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.MaskDrawerFormData

writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms.ROIDrawerFormData

writeDataset(File, String, ImgPlus<T>) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.Hdf5

Hdf5.writeDataset(java.io.File, java.lang.String, net.imagej.ImgPlus<T>) without compression, axis reordering and callback.

writeDataset(File, String, ImgPlus<T>, int) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.Hdf5

Hdf5.writeDataset(java.io.File, java.lang.String, net.imagej.ImgPlus<T>) without axis reordering and callback.

writeDataset(File, String, ImgPlus<T>, int, List<AxisType>) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.Hdf5

Hdf5.writeDataset(java.io.File, java.lang.String, net.imagej.ImgPlus<T>) without callback.

writeDataset(File, String, ImgPlus<T>, int, List<AxisType>, LongConsumer) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.Hdf5

Write image contents to HDF5 dataset, creating/overwriting file and dataset if needed.

writeEnvironmentToParameters(T, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.desktop.api.environments.JIPipeDesktopEasyInstallExternalEnvironmentInstaller

This method should write the environment to the parameter access Will be executed on the Swing thread (via invokeLater)

writeImage(ImagePlus, Path, String, List<AxisType>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.ilastik.utils.hdf5.IJ1Hdf5

writeImage(BufferedImage, String) - Static method in class org.hkijena.jipipe.utils.ui.ScreenImage

Write a BufferedImage to a File.

writeImageToMovie(ImagePlus, HyperstackDimension, double, Path, AVICompression, int, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

writeJSON(Path, Object) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeWriteDataStorage

Writes an object as JSON

writeOMEXMLToZARR(Path, OMEXMLMetadata, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ZARRUtils

writeText(Path, String) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeWriteDataStorage

Writes an object as JSON

writeTo(FHT) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo

writeToFolder(List<? extends JIPipeDataTable>, Path, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter

Writes data to the specified folder

writeToFolder(JIPipeDataTable, Path, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter

Writes data to the specified folder

writeToFolder(JIPipeDataTable, Path, JIPipeProgressInfo, Set<String>) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter

Writes data to the specified folder

writeToFolder(JIPipeDataTable, int, Path, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter

Writes data to the specified folder

writeToFolder(JIPipeDataTable, int, Path, JIPipeProgressInfo, Set<String>) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter

Writes data to the specified folder

writeToVariables(JIPipeExpressionVariablesMap, boolean, String, boolean, String) - Method in class org.hkijena.jipipe.plugins.expressions.custom.JIPipeCustomExpressionVariablesParameter

Writes the parameter values to variables

writeToVariables(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.plugins.expressions.custom.JIPipeCustomExpressionVariablesParameter

Writes the parameter values to variables with default configuration

writeToVariables(Filaments3DGraphData, FilamentEdge, JIPipeExpressionVariablesMap, String) - Static method in class org.hkijena.jipipe.plugins.ijfilaments.util.AllFilamentEdgeVariablesInfo

writeToVariables(Filaments3DGraphData, FilamentEdge, JIPipeExpressionVariablesMap, String) - Static method in class org.hkijena.jipipe.plugins.ijfilaments.util.AllFilamentVertexVariablesInfo

writeToVariables(Filaments3DGraphData, FilamentEdge, JIPipeExpressionVariablesMap, String) - Static method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentEdgeVariablesInfo

writeToVariables(Filaments3DGraphData, FilamentVertex, FilamentVertex, JIPipeExpressionVariablesMap, String) - Static method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentEdgeVariablesInfo

writeToVariables(Filaments3DGraphData, FilamentVertex, FilamentVertex, JIPipeExpressionVariablesMap, String) - Static method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentEndpointsVariablesInfo

writeToVariables(Filaments3DGraphData, FilamentVertex, FilamentVertex, JIPipeExpressionVariablesMap, String) - Static method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentUnconnectedEdgeVariablesInfo

writeToVariables(Filaments3DGraphData, FilamentVertex, JIPipeExpressionVariablesMap, String) - Static method in class org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertexVariablesInfo

writeToVariables(ImagePlus, JIPipeExpressionVariablesMap) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.Image5DExpressionParameterVariablesInfo

X

XMLData - Class in org.hkijena.jipipe.plugins.strings

XMLData(String) - Constructor for class org.hkijena.jipipe.plugins.strings.XMLData

XMLData(StringData) - Constructor for class org.hkijena.jipipe.plugins.strings.XMLData

XmlUtils - Class in org.hkijena.jipipe.utils.xml

XmlUtils() - Constructor for class org.hkijena.jipipe.utils.xml.XmlUtils

XYJFreeChartPlotData - Class in org.hkijena.jipipe.plugins.plots.datatypes

Contains data for XY plots Any plot has following columns: X (Double), Y (Double)

XYJFreeChartPlotData() - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

Creates a new instance

XYJFreeChartPlotData(XYJFreeChartPlotData) - Constructor for class org.hkijena.jipipe.plugins.plots.datatypes.XYJFreeChartPlotData

Creates a copy

Y

yybegin(int) - Method in class org.hkijena.jipipe.plugins.r.ui.RTokenMaker

Enters a new lexical state

yycharat(int) - Method in class org.hkijena.jipipe.plugins.r.ui.RTokenMaker

Returns the character at position pos from the matched text.

yyclose() - Method in class org.hkijena.jipipe.plugins.r.ui.RTokenMaker

Closes the input stream.

YYEOF - Static variable in class org.hkijena.jipipe.plugins.r.ui.RTokenMaker

This character denotes the end of file

YYINITIAL - Static variable in class org.hkijena.jipipe.plugins.r.ui.RTokenMaker

yylength() - Method in class org.hkijena.jipipe.plugins.r.ui.RTokenMaker

Returns the length of the matched text region.

yylex() - Method in class org.hkijena.jipipe.plugins.r.ui.RTokenMaker

Resumes scanning until the next regular expression is matched, the end of input is encountered or an I/O-Error occurs.

yypushback(int) - Method in class org.hkijena.jipipe.plugins.r.ui.RTokenMaker

Pushes the specified amount of characters back into the input stream.

yyreset(Reader) - Method in class org.hkijena.jipipe.plugins.r.ui.RTokenMaker

Resets the scanner to read from a new input stream.

yytext() - Method in class org.hkijena.jipipe.plugins.r.ui.RTokenMaker

Returns the text matched by the current regular expression.

Z

ZARRUtils - Class in org.hkijena.jipipe.plugins.imagejdatatypes.util

ZARRUtils() - Constructor for class org.hkijena.jipipe.plugins.imagejdatatypes.util.ZARRUtils

ZERO - Static variable in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

zeroSliceIndexToOneStackIndex(int, int, int, ImagePlus) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Stack index (zero-based)

zeroSliceIndexToOneStackIndex(int, int, int, int, int, int) - Static method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageJUtils

Stack index (zero-based)

zeroSliceIndexToOneStackIndex(ImagePlus) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

Converts this zero-based index into a one-based index and returns a one-based stack index

zeroSliceIndexToOneStackIndex(int, int, int) - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

Converts this zero-based index into a one-based index and returns a one-based stack index

ZeroTableColumnData - Class in org.hkijena.jipipe.plugins.tables.datatypes

Generates numbers from 0 to row count

ZeroTableColumnData() - Constructor for class org.hkijena.jipipe.plugins.tables.datatypes.ZeroTableColumnData

zeroToOne() - Method in class org.hkijena.jipipe.plugins.imagejdatatypes.util.ImageSliceIndex

zipDirectory(Path, String, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.ArchiveUtils

zipFileOrDirectory(Path, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.ArchiveUtils

zoom(double) - Method in class org.hkijena.jipipe.utils.PointRange

Apply scaling to all components and return the result.

ZoomChangedEvent(JIPipeDesktopZoomViewPort) - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopZoomViewPort.ZoomChangedEvent

ZoomChangedEventEmitter() - Constructor for class org.hkijena.jipipe.desktop.commons.components.JIPipeDesktopZoomViewPort.ZoomChangedEventEmitter

zoomIn() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

zoomOut() - Method in class org.hkijena.jipipe.desktop.app.grapheditor.commons.JIPipeDesktopGraphCanvasUI

ZProjectorAlgorithm - Class in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

Wrapper around ZProjector

ZProjectorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm

Instantiates a new node type.

ZProjectorAlgorithm(ZProjectorAlgorithm) - Constructor for class org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm

Instantiates a new node type.

ZProjectorAlgorithm.Method - Enum in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

Available transformation functions

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