FilamentVertex (jipipe 5.1.0-SNAPSHOT API)

java.lang.Object
- org.hkijena.jipipe.plugins.ijfilaments.util.FilamentVertex

public class FilamentVertex
extends Object

Constructor Summary

Constructors
Constructor and Description

FilamentVertex()

FilamentVertex(FilamentVertex other)

Constructors
Constructor and Description
`FilamentVertex()`
`FilamentVertex(FilamentVertex other)`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`boolean`	`equals(Object o)`
`Color`	`getColor()`
`String`	`getConsensusPhysicalSizeUnit()` Finds the common unit within the vertex.
`double`	`getMaxRadiusInUnit(String unit)` Converts the radius into units and returns the maximum value
`Map<String,String>`	`getMetadata()`
`NonSpatialPoint3d`	`getNonSpatialLocation()`
`Quantity`	`getPhysicalVoxelSizeX()`
`Quantity`	`getPhysicalVoxelSizeY()`
`Quantity`	`getPhysicalVoxelSizeZ()`
`double`	`getRadius()`
`Point3d`	`getSpatialLocation()`
`org.scijava.vecmath.Vector3d`	`getSpatialLocationInUnit(String unit)`
`UUID`	`getUuid()`
`double`	`getValue()`
`Map<String,Double>`	`getValueBackups()`
`double`	`getXMax(boolean useThickness)`
`double`	`getXMin(boolean useThickness)`
`double`	`getYMax(boolean useThickness)`
`double`	`getYMin(boolean useThickness)`
`double`	`getZMax(boolean useThickness)`
`double`	`getZMin(boolean useThickness)`
`int`	`hashCode()`
`boolean`	`is2D()`
`void`	`setColor(Color color)`
`void`	`setMetadata(Map<String,String> metadata)`
`void`	`setMetadata(String key, Object value)`
`void`	`setNonSpatialLocation(NonSpatialPoint3d nonSpatialLocation)`
`void`	`setPhysicalVoxelSizeX(Quantity physicalVoxelSizeX)`
`void`	`setPhysicalVoxelSizeY(Quantity physicalVoxelSizeY)`
`void`	`setPhysicalVoxelSizeZ(Quantity physicalVoxelSizeZ)`
`void`	`setRadius(double radius)`
`void`	`setSpatialLocation(Point3d spatialLocation)`
`void`	`setUuid(UUID uuid)`
`void`	`setValue(double value)`
`void`	`setValueBackups(Map<String,Double> valueBackups)`

Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

FilamentVertex
```
public FilamentVertex()
```

FilamentVertex

public FilamentVertex(FilamentVertex other)

Method Detail

getValueBackups

public Map<String,Double> getValueBackups()

setValueBackups

public void setValueBackups(Map<String,Double> valueBackups)

getSpatialLocation
```
public Point3d getSpatialLocation()
```

setSpatialLocation

public void setSpatialLocation(Point3d spatialLocation)

getNonSpatialLocation

public NonSpatialPoint3d getNonSpatialLocation()

setNonSpatialLocation

public void setNonSpatialLocation(NonSpatialPoint3d nonSpatialLocation)

getPhysicalVoxelSizeX

public Quantity getPhysicalVoxelSizeX()

setPhysicalVoxelSizeX

public void setPhysicalVoxelSizeX(Quantity physicalVoxelSizeX)

getPhysicalVoxelSizeY

public Quantity getPhysicalVoxelSizeY()

setPhysicalVoxelSizeY

public void setPhysicalVoxelSizeY(Quantity physicalVoxelSizeY)

getPhysicalVoxelSizeZ

public Quantity getPhysicalVoxelSizeZ()

setPhysicalVoxelSizeZ

public void setPhysicalVoxelSizeZ(Quantity physicalVoxelSizeZ)

getValue
```
public double getValue()
```

setValue
```
public void setValue(double value)
```

getRadius
```
public double getRadius()
```

setRadius
```
public void setRadius(double radius)
```

getMetadata

public Map<String,String> getMetadata()

setMetadata

public void setMetadata(Map<String,String> metadata)

getUuid
```
public UUID getUuid()
```

setUuid
```
public void setUuid(UUID uuid)
```

getColor
```
public Color getColor()
```

setColor
```
public void setColor(Color color)
```

equals
```
public boolean equals(Object o)
```
Overrides:

equals in class Object

hashCode
```
public int hashCode()
```
Overrides:

hashCode in class Object

setMetadata

public void setMetadata(String key,
                        Object value)

getXMin

public double getXMin(boolean useThickness)

getXMax

public double getXMax(boolean useThickness)

getYMin

public double getYMin(boolean useThickness)

getYMax

public double getYMax(boolean useThickness)

getZMin

public double getZMin(boolean useThickness)

getZMax

public double getZMax(boolean useThickness)

is2D
```
public boolean is2D()
```

getConsensusPhysicalSizeUnit
```
public String getConsensusPhysicalSizeUnit()
```
Finds the common unit within the vertex. Returns 'pixels' if units are inconsistent

Returns:

the consensus unit

getSpatialLocationInUnit

public org.scijava.vecmath.Vector3d getSpatialLocationInUnit(String unit)

getMaxRadiusInUnit
```
public double getMaxRadiusInUnit(String unit)
```
Converts the radius into units and returns the maximum value

Parameters:

unit - the unit

Returns:

the maximum value

Class FilamentVertex

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

FilamentVertex

FilamentVertex

Method Detail

getValueBackups

setValueBackups

getSpatialLocation

setSpatialLocation

getNonSpatialLocation

setNonSpatialLocation

getPhysicalVoxelSizeX

setPhysicalVoxelSizeX

getPhysicalVoxelSizeY

setPhysicalVoxelSizeY

getPhysicalVoxelSizeZ

setPhysicalVoxelSizeZ

getValue

setValue

getRadius

setRadius

getMetadata

setMetadata

getUuid

setUuid

getColor

setColor

equals

hashCode

setMetadata

getXMin

getXMax

getYMin

getYMax

getZMin

getZMax

is2D

getConsensusPhysicalSizeUnit

getSpatialLocationInUnit

getMaxRadiusInUnit