org.hkijena.jipipe.plugins.opencv.utils

Class OpenCvImageUtils

java.lang.Object

org.hkijena.jipipe.plugins.opencv.utils.OpenCvImageUtils

public class OpenCvImageUtils
extends Object

Method Summary

Modifier and Type	Method and Description
static org.bytedeco.javacpp.opencv_core.Mat	convertByteProcessorToMat(ij.process.ByteProcessor byteProcessor)
static org.bytedeco.javacpp.opencv_core.Mat	convertColorProcessorToMat(ij.process.ColorProcessor colorProcessor)
static org.bytedeco.javacpp.opencv_core.Mat	convertFloatProcessorToMat(ij.process.FloatProcessor floatProcessor)
static ij.process.ByteProcessor	convertMatToByteProcessor(org.bytedeco.javacpp.opencv_core.Mat mat)
static ij.process.ColorProcessor	convertMatToColorProcessor(org.bytedeco.javacpp.opencv_core.Mat mat)
static ij.process.FloatProcessor	convertMatToFloatProcessor(org.bytedeco.javacpp.opencv_core.Mat mat)
static ij.process.ShortProcessor	convertMatToShortProcessor(org.bytedeco.javacpp.opencv_core.Mat mat)
static org.bytedeco.javacpp.opencv_core.Mat	convertShortProcessorToMat(ij.process.ShortProcessor shortProcessor)
static int	findHeight(Collection<org.bytedeco.javacpp.opencv_core.Mat> images)
static int	findHeight(org.bytedeco.javacpp.opencv_core.MatVector images)
static int	findNChannels(Map<ImageSliceIndex,org.bytedeco.javacpp.opencv_core.Mat> images)
static int	findNFrames(Map<ImageSliceIndex,org.bytedeco.javacpp.opencv_core.Mat> images)
static int	findNSlices(Map<ImageSliceIndex,org.bytedeco.javacpp.opencv_core.Mat> images)
static int	findWidth(Collection<org.bytedeco.javacpp.opencv_core.Mat> images)
static int	findWidth(org.bytedeco.javacpp.opencv_core.MatVector images)
static void	forEachIndexedZCTSlice(OpenCvImageData img, BiConsumer<org.bytedeco.javacpp.opencv_core.Mat,ImageSliceIndex> function, JIPipeProgressInfo progressInfo) Runs the function for each Z, C, and T slice.
static OpenCvImageData	generateForEachIndexedZCTSlice(OpenCvImageData img, BiFunction<org.bytedeco.javacpp.opencv_core.Mat,ImageSliceIndex,org.bytedeco.javacpp.opencv_core.Mat> function, JIPipeProgressInfo progressInfo) Runs the function for each Z, C, and T slice.
static String	getTypeName(org.bytedeco.javacpp.opencv_core.Mat mat)
static org.bytedeco.javacpp.opencv_core.Mat	toGrayscale(org.bytedeco.javacpp.opencv_core.Mat src, int type)
static ij.ImagePlus	toImagePlus(org.bytedeco.javacpp.opencv_core.Mat mat)
static org.bytedeco.javacpp.opencv_core.Mat	toMask(org.bytedeco.javacpp.opencv_core.Mat src)
static org.bytedeco.javacpp.opencv_core.Mat	toMat(ij.process.ImageProcessor processor)
static ij.process.ImageProcessor	toProcessor(org.bytedeco.javacpp.opencv_core.Mat mat)
static org.bytedeco.javacpp.opencv_core.Mat	toType(org.bytedeco.javacpp.opencv_core.Mat src, OpenCvType type, OpenCvType... allowedTypes)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

findNSlices

public static int findNSlices(Map<ImageSliceIndex,org.bytedeco.javacpp.opencv_core.Mat> images)

findNFrames

public static int findNFrames(Map<ImageSliceIndex,org.bytedeco.javacpp.opencv_core.Mat> images)

findNChannels

public static int findNChannels(Map<ImageSliceIndex,org.bytedeco.javacpp.opencv_core.Mat> images)

findWidth

public static int findWidth(Collection<org.bytedeco.javacpp.opencv_core.Mat> images)

findHeight

public static int findHeight(Collection<org.bytedeco.javacpp.opencv_core.Mat> images)

findWidth

public static int findWidth(org.bytedeco.javacpp.opencv_core.MatVector images)

findHeight

public static int findHeight(org.bytedeco.javacpp.opencv_core.MatVector images)

toMat

public static org.bytedeco.javacpp.opencv_core.Mat toMat(ij.process.ImageProcessor processor)

forEachIndexedZCTSlice

public static void forEachIndexedZCTSlice(OpenCvImageData img,
                                          BiConsumer<org.bytedeco.javacpp.opencv_core.Mat,ImageSliceIndex> function,
                                          JIPipeProgressInfo progressInfo)

Runs the function for each Z, C, and T slice.

Parameters:

img - the image

function - the function. The indices are ZERO-based

progressInfo - the progress

generateForEachIndexedZCTSlice

public static OpenCvImageData generateForEachIndexedZCTSlice(OpenCvImageData img,
                                                             BiFunction<org.bytedeco.javacpp.opencv_core.Mat,ImageSliceIndex,org.bytedeco.javacpp.opencv_core.Mat> function,
                                                             JIPipeProgressInfo progressInfo)

Runs the function for each Z, C, and T slice.

Parameters:

img - the image

function - the function. The indices are ZERO-based

progressInfo - the progress

toProcessor

public static ij.process.ImageProcessor toProcessor(org.bytedeco.javacpp.opencv_core.Mat mat)

toImagePlus

public static ij.ImagePlus toImagePlus(org.bytedeco.javacpp.opencv_core.Mat mat)

toGrayscale

public static org.bytedeco.javacpp.opencv_core.Mat toGrayscale(org.bytedeco.javacpp.opencv_core.Mat src,
                                                               int type)

toType

public static org.bytedeco.javacpp.opencv_core.Mat toType(org.bytedeco.javacpp.opencv_core.Mat src,
                                                          OpenCvType type,
                                                          OpenCvType... allowedTypes)

toMask

public static org.bytedeco.javacpp.opencv_core.Mat toMask(org.bytedeco.javacpp.opencv_core.Mat src)

getTypeName

public static String getTypeName(org.bytedeco.javacpp.opencv_core.Mat mat)

convertByteProcessorToMat

public static org.bytedeco.javacpp.opencv_core.Mat convertByteProcessorToMat(ij.process.ByteProcessor byteProcessor)

convertShortProcessorToMat

public static org.bytedeco.javacpp.opencv_core.Mat convertShortProcessorToMat(ij.process.ShortProcessor shortProcessor)

convertFloatProcessorToMat

public static org.bytedeco.javacpp.opencv_core.Mat convertFloatProcessorToMat(ij.process.FloatProcessor floatProcessor)

convertColorProcessorToMat

public static org.bytedeco.javacpp.opencv_core.Mat convertColorProcessorToMat(ij.process.ColorProcessor colorProcessor)

convertMatToByteProcessor

public static ij.process.ByteProcessor convertMatToByteProcessor(org.bytedeco.javacpp.opencv_core.Mat mat)

convertMatToShortProcessor

public static ij.process.ShortProcessor convertMatToShortProcessor(org.bytedeco.javacpp.opencv_core.Mat mat)

convertMatToFloatProcessor

public static ij.process.FloatProcessor convertMatToFloatProcessor(org.bytedeco.javacpp.opencv_core.Mat mat)

convertMatToColorProcessor

public static ij.process.ColorProcessor convertMatToColorProcessor(org.bytedeco.javacpp.opencv_core.Mat mat)