org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify

Class ChangeRoi3DPropertiesFromExpressionsAlgorithm

java.lang.Object

org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection

org.hkijena.jipipe.api.nodes.JIPipeGraphNode

org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

All Implemented Interfaces:

JIPipeSlotConfiguration.SlotConfigurationChangedEventListener, JIPipeFunctionallyComparable, JIPipeIterationStepAlgorithm, JIPipeAdaptiveParametersAlgorithm, JIPipeParallelizedAlgorithm, JIPipeParameterCollection, JIPipeParameterCollection.ParameterChangedEventListener, JIPipeParameterCollection.ParameterStructureChangedEventListener, JIPipeParameterCollection.ParameterUIChangedEventListener, JIPipeValidatable

public class ChangeRoi3DPropertiesFromExpressionsAlgorithm
extends JIPipeSimpleIteratingAlgorithm

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry

Nested classes/interfaces inherited from class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

JIPipeGraphNode.BaseDirectoryChangedEvent, JIPipeGraphNode.BaseDirectoryChangedEventEmitter, JIPipeGraphNode.BaseDirectoryChangedEventListener, JIPipeGraphNode.NodeSlotsChangedEvent, JIPipeGraphNode.NodeSlotsChangedEventEmitter, JIPipeGraphNode.NodeSlotsChangedEventListener, JIPipeGraphNode.Serializer

Nested classes/interfaces inherited from interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

JIPipeParameterCollection.ParameterChangedEvent, JIPipeParameterCollection.ParameterChangedEventEmitter, JIPipeParameterCollection.ParameterChangedEventListener, JIPipeParameterCollection.ParameterStructureChangedEvent, JIPipeParameterCollection.ParameterStructureChangedEventEmitter, JIPipeParameterCollection.ParameterStructureChangedEventListener, JIPipeParameterCollection.ParameterUIChangedEvent, JIPipeParameterCollection.ParameterUIChangedEventEmitter, JIPipeParameterCollection.ParameterUIChangedEventListener

Field Summary

Fields inherited from class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

SLOT_PARAMETERS

Constructor Summary

Constructors

Constructor and Description
ChangeRoi3DPropertiesFromExpressionsAlgorithm(ChangeRoi3DPropertiesFromExpressionsAlgorithm other)
ChangeRoi3DPropertiesFromExpressionsAlgorithm(JIPipeNodeInfo info)

Method Summary

Modifier and Type	Method and Description
OptionalJIPipeExpressionParameter	getCenterX()
OptionalJIPipeExpressionParameter	getCenterY()
OptionalJIPipeExpressionParameter	getCenterZ()
OptionalJIPipeExpressionParameter	getChannelLocation()
OptionalJIPipeExpressionParameter	getFillColor()
OptionalJIPipeExpressionParameter	getFrameLocation()
ROI3DMeasurementSetParameter	getMeasurements()
ParameterCollectionList	getMetadataEntries()
OptionalJIPipeExpressionParameter	getRoiComment()
OptionalJIPipeExpressionParameter	getRoiName()
boolean	isMeasureInPhysicalUnits()
protected void	runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Runs code on one data row
void	setCenterX(OptionalJIPipeExpressionParameter centerX)
void	setCenterY(OptionalJIPipeExpressionParameter centerY)
void	setCenterZ(OptionalJIPipeExpressionParameter centerZ)
void	setChannelLocation(OptionalJIPipeExpressionParameter channelLocation)
void	setFillColor(OptionalJIPipeExpressionParameter fillColor)
void	setFrameLocation(OptionalJIPipeExpressionParameter frameLocation)
void	setMeasureInPhysicalUnits(boolean measureInPhysicalUnits)
void	setMeasurements(ROI3DMeasurementSetParameter measurements)
void	setMetadataEntries(ParameterCollectionList metadataEntries)
void	setRoiComment(OptionalJIPipeExpressionParameter roiComment)
void	setRoiName(OptionalJIPipeExpressionParameter roiName)

Methods inherited from class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm

createUIInputSlotIconDescriptionMenuItems, generateDataBatchesGenerationResult, getAdaptiveParameterSettings, getDataBatchGenerationSettings, getGenerationSettingsInterface, getParallelizationBatchSize, isAllowEmptyIterationStep, isParameterUIVisible, isParameterUIVisible, reportValidity, runParameterSet, runPassThrough, supportsParallelization

Methods inherited from class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

getDataInputSlotCount, getDataInputSlots, getFirstInputSlot, getNonParameterInputSlots, getParameterSlot, getParameterSlotAlgorithmSettings, getUIInputSlotIcon, getUIInputSlotIconBaseDimensions, onParameterChanged, run

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

canAutoPassThrough, canPassThrough, functionallyEquals, getDefaultCustomExpressionVariables, getRuntimePartition, isEnabled, isEnableDefaultCustomExpressionVariables, isPassThrough, isPostprocessor, isPreprocessor, isSkipped, loadExample, onDeserialized, runPassThrough, setEnabled, setPassThrough, setRuntimePartition, setSkipped

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

archiveTo, canUserDelete, clearLocations, clearSlotData, copySlotConfiguration, duplicate, emitNodeSlotsChangedEvent, fromJson, getAliasIdInParentGraph, getBaseDirectory, getBaseDirectoryChangedEventEmitter, getCategory, getCompartmentDisplayName, getCompartmentUUIDInGraphAsString, getCompartmentUUIDInParentGraph, getCustomDescription, getCustomName, getDependencies, getDisplayName, getEnvironmentDependencies, getFirstOutputSlot, getInfo, getInputSlot, getInputSlotMap, getInputSlotOrder, getInputSlots, getInputSlotsWithRole, getInternalStoragePath, getLastInputSlot, getLastOutputSlot, getName, getNewScratch, getNodeSlotsChangedEventEmitter, getNodeUILocationPerViewModePerCompartment, getNodeUILocationWithin, getOpenInputSlots, getOutputSlot, getOutputSlotMap, getOutputSlots, getOutputSlotsWithRole, getParentGraph, getProject, getProjectCompartment, getProjectDataDirs, getProjectDirectory, getRuntimeProject, getScratchBaseDirectory, getSlotConfiguration, getStoragePath, getTextDescription, getUUIDInParentGraph, hasInputSlot, hasOutputSlot, isBookmarked, isUiLocked, isVisibleIn, onSlotConfigurationChanged, renderInputSlots, renderOutputSlots, setBaseDirectory, setBookmarked, setCustomDescription, setCustomName, setInfo, setInternalStoragePath, setNodeUILocationPerViewModePerCompartment, setNodeUILocationWithin, setNodeUILocationWithin, setParentGraph, setProjectDirectory, setRuntimeProject, setScratchBaseDirectory, setSlotConfiguration, setStoragePath, setUiLocked, toggleSlot, toJson, updateGraphNodeSlots

Methods inherited from class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection

getParameterChangedEventEmitter, getParameterStructureChangedEventEmitter, getParameterUIChangedEventEmitter, onParameterStructureChanged, onParameterUIChanged, registerSubParameter, registerSubParameters

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationStepAlgorithm

generateDataBatchesDryRun

Methods inherited from interface org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParametersAlgorithm

installUIOverrideParameterEditor, installUIParameterOptions

Methods inherited from interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

deserializeFromJsonNode, emitParameterChangedEvent, emitParameterStructureChangedEvent, emitParameterUIChangedEvent, getContextActions, getParameter, getParameterAccess, getParameterChangedEventEmitter, getParameterStructureChangedEventEmitter, getParameterUIChangedEventEmitter, serializeToJsonFile, serializeToJsonGenerator, serializeToJsonString, setParameter

Methods inherited from interface org.hkijena.jipipe.api.validation.JIPipeValidatable

generateValidityReport

Methods inherited from interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterUIChangedEventListener

onParameterUIChanged

Methods inherited from interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterStructureChangedEventListener

onParameterStructureChanged

Constructor Detail

ChangeRoi3DPropertiesFromExpressionsAlgorithm

public ChangeRoi3DPropertiesFromExpressionsAlgorithm(JIPipeNodeInfo info)

ChangeRoi3DPropertiesFromExpressionsAlgorithm

public ChangeRoi3DPropertiesFromExpressionsAlgorithm(ChangeRoi3DPropertiesFromExpressionsAlgorithm other)

Method Detail

runIteration

protected void runIteration(JIPipeSingleIterationStep iterationStep,
                            JIPipeIterationContext iterationContext,
                            JIPipeGraphNodeRunContext runContext,
                            JIPipeProgressInfo progressInfo)

Description copied from class: JIPipeSimpleIteratingAlgorithm

Runs code on one data row

Specified by:

runIteration in class JIPipeSimpleIteratingAlgorithm

Parameters:

iterationStep - The data interface

iterationContext - the iteration context

runContext - the run context

progressInfo - the progress info from the run

getRoiName

public OptionalJIPipeExpressionParameter getRoiName()

setRoiName

public void setRoiName(OptionalJIPipeExpressionParameter roiName)

getRoiComment

public OptionalJIPipeExpressionParameter getRoiComment()

setRoiComment

public void setRoiComment(OptionalJIPipeExpressionParameter roiComment)

getCenterX

public OptionalJIPipeExpressionParameter getCenterX()

setCenterX

public void setCenterX(OptionalJIPipeExpressionParameter centerX)

getCenterY

public OptionalJIPipeExpressionParameter getCenterY()

setCenterY

public void setCenterY(OptionalJIPipeExpressionParameter centerY)

getCenterZ

public OptionalJIPipeExpressionParameter getCenterZ()

setCenterZ

public void setCenterZ(OptionalJIPipeExpressionParameter centerZ)

getChannelLocation

public OptionalJIPipeExpressionParameter getChannelLocation()

setChannelLocation

public void setChannelLocation(OptionalJIPipeExpressionParameter channelLocation)

getFrameLocation

public OptionalJIPipeExpressionParameter getFrameLocation()

setFrameLocation

public void setFrameLocation(OptionalJIPipeExpressionParameter frameLocation)

getFillColor

public OptionalJIPipeExpressionParameter getFillColor()

setFillColor

public void setFillColor(OptionalJIPipeExpressionParameter fillColor)

getMetadataEntries

public ParameterCollectionList getMetadataEntries()

setMetadataEntries

public void setMetadataEntries(ParameterCollectionList metadataEntries)

getMeasurements

public ROI3DMeasurementSetParameter getMeasurements()

setMeasurements

public void setMeasurements(ROI3DMeasurementSetParameter measurements)

isMeasureInPhysicalUnits

public boolean isMeasureInPhysicalUnits()

setMeasureInPhysicalUnits

public void setMeasureInPhysicalUnits(boolean measureInPhysicalUnits)