Uses of Class
org.hkijena.jipipe.api.nodes.JIPipeInputSlots

Packages that use JIPipeInputSlots

Package	Description
org.hkijena.jipipe.extensions.annotation.algorithms
org.hkijena.jipipe.extensions.cellpose.algorithms
org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated
org.hkijena.jipipe.extensions.filesystem.algorithms
org.hkijena.jipipe.extensions.forms.algorithms
org.hkijena.jipipe.extensions.ijmultitemplatematching
org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots
org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks
org.hkijena.jipipe.extensions.ijweka.nodes
org.hkijena.jipipe.extensions.imagejalgorithms.ij1
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.analyze
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.colocalization
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.convolve
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.datasources
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.dimensions
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.forms
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.generate
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.io
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.labels
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.labels.filter
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.lut
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.distancemap
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.local
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.morphology
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.overlay
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.assemble
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.convert
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.draw
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.filter
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.generate
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.measure
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.merge
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.modify
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.properties
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.sort
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.segment
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.statistics
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.iterative
org.hkijena.jipipe.extensions.imagejalgorithms.ij1.transform
org.hkijena.jipipe.extensions.multiparameters.nodes
org.hkijena.jipipe.extensions.omero.algorithms
org.hkijena.jipipe.extensions.omnipose.algorithms
org.hkijena.jipipe.extensions.tables.nodes.annotations
org.hkijena.jipipe.extensions.tables.nodes.merge
org.hkijena.jipipe.extensions.utils.algorithms

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.annotation.algorithms

Classes in org.hkijena.jipipe.extensions.annotation.algorithms with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	AnnotateWithAnnotationTable Algorithm that merges the annotations of all inputs and outputs the data with the shared annotations
class	AnnotateWithData
class	OverwriteAnnotations

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.cellpose.algorithms

Classes in org.hkijena.jipipe.extensions.cellpose.algorithms with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	CellposeTrainingAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated

Classes in org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	CellposeTrainingAlgorithm_Old Deprecated.

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.filesystem.algorithms

Classes in org.hkijena.jipipe.extensions.filesystem.algorithms with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	ConcatenatePaths Applies subfolder navigation to each input folder
class	CopyPath Applies subfolder navigation to each input folder
class	ExportData
class	ExportDataTable
class	RelativizePaths Applies subfolder navigation to each input folder

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.forms.algorithms

Classes in org.hkijena.jipipe.extensions.forms.algorithms with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	IteratingFormProcessorAlgorithm
class	MergingFormProcessorAlgorithm
class	SimpleIteratingFormProcessorAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.ijmultitemplatematching

Classes in org.hkijena.jipipe.extensions.ijmultitemplatematching with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	MultiTemplateMatchingAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots

Classes in org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	SpotDetectorNode
class	SpotsToRGBNode

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks

Classes in org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	FollowSpotsPerTrackNode
class	TrackingNode
class	TracksToRGBNode

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.ijweka.nodes

Classes in org.hkijena.jipipe.extensions.ijweka.nodes with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	ImportWekaModelFromFileAlgorithm
class	WekaClassification2DAlgorithm
class	WekaClassification3DAlgorithm
class	WekaTrainingLabels2DAlgorithm
class	WekaTrainingMask2DAlgorithm
class	WekaTrainingROI2DAlgorithm
class	WekaTrainingROI3DAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1 with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	MacroWrapperAlgorithm An algorithm that wraps around an ImageJ macro

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.analyze

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.analyze with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	AnalyzeSkeleton2D3DAlgorithm
class	ImageStatisticsAlgorithm Wrapper around RoiManager

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	BitwiseLogicalOperationAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.colocalization

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.colocalization with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	Coloc2Node

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.convolve

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.convolve with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	ConvolveByImage2DAlgorithm Wrapper around Convolver

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.datasources

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.datasources with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	OMEImageFromImagePlus

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.dimensions

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.dimensions with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	StackCombinerAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.forms

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.forms with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	DrawMaskAlgorithm
class	DrawROIAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.generate

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.generate with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	GenerateMissingImageFromMathExpression2D Wrapper around ImageProcessor
class	GenerateMissingTablesAlgorithm
class	GenerateMissingZeroImage Wrapper around ImageProcessor

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.io

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.io with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	ExportImage2Algorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.labels

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.labels with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	AnnotateWithOverlapMeasureLabelsAlgorithm
class	ExtractLabelStatisticsAlgorithm
class	MergeLabelsAlgorithm
class	OverlapMeasureLabelsAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.labels.filter

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.labels.filter with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	FilterLabelsByMaskAlgorithm
class	FilterLabelsByOverlapAlgorithm
class	FilterLabelsByStatisticsAlgorithm Wrapper around RoiManager

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.lut

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.lut with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	SetLUTFromImageAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	ImageCalculator2DAlgorithm Wrapper around ImageProcessor

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.distancemap

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.distancemap with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	GeodesicDistanceMap2DAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.local

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.local with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	ImposeMaxima2DAlgorithm
class	ImposeMaxima3DAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.morphology

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.morphology with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	MorphologicalReconstruction2DAlgorithm
class	MorphologicalReconstruction3DAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.overlay

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.overlay with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	SetOverlayAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	CropToRoiAlgorithm
class	ExtractImageInRoiAlgorithm
class	SetRoiImageAlgorithm Wrapper around RoiManager
class	SplitRoiConnectedComponentsAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.assemble

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.assemble with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	AssembleExtractedROIAlgorithm
class	ExtractFromROIAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.convert

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.convert with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	ROIToLabelsByNameAlgorithm
class	ROIToLabelsExpressionAlgorithm
class	RoiToMaskAlgorithm Wrapper around RoiManager
class	RoiToRGBAlgorithm Wrapper around RoiDrawer

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.draw

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.draw with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	DrawOvalRoiAlgorithm
class	DrawRectangleRoiAlgorithm
class	DrawScaleBarRoiAlgorithm
class	DrawTextRoiAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.filter

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.filter with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	FilterROIByOverlapAlgorithm
class	FilterRoiByStatisticsAlgorithm Wrapper around RoiManager
class	FilterRoiByStatisticsScriptAlgorithm Wrapper around RoiManager
class	RemoveBorderRoisAlgorithm Wrapper around RoiManager

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.generate

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.generate with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	GenerateMissingRoiListsAlgorithm
class	ReferencedAppendRectangularRoiAlgorithm Deprecated.

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.measure

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.measure with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	RoiStatisticsAlgorithm Wrapper around RoiManager

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.merge

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.merge with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	AddRoiListsAlgorithm Wrapper around RoiManager
class	FilterAndMergeRoiByStatisticsScriptAlgorithm Wrapper around RoiManager

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.modify

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.modify with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm
class	ChangeRoiPropertiesFromExpressionsAlgorithm Wrapper around RoiManager
class	ColorRoiByStatisticsAlgorithm Wrapper around RoiManager
class	RoiFloodFillAlgorithm Wrapper around RoiManager

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.properties

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.properties with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	SetRoiMetadataByStatisticsAlgorithm Wrapper around RoiManager
class	SetROIMetadataFromTableAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.sort

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.sort with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	SortAndExtractRoiByStatisticsAlgorithm Deprecated.
class	SortAndExtractRoiByStatisticsAlgorithm2 Wrapper around RoiManager
class	SortRoiListByExpressionsAndMeasurementsAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.segment

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.segment with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	SeededWatershedSegmentationAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.statistics

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.statistics with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	AverageKeyValueThresholdStatisticsGenerator
class	FastKeyValueThresholdStatisticsGenerator
class	KeyValueAveragesGenerator
class	KeyValueHistogramGenerator
class	KeyValueThresholdPartitionAveragesGenerator
class	KeyValueThresholdPartitionGenerator
class	KeyValueThresholdStatisticsGenerator

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.iterative

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.iterative with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	IterativeThresholdByROIStatistics2DAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.transform

Classes in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.transform with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	MergeImagesAlgorithm
class	TransformEqualizeDimensionsAlgorithm
class	Warp2DAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.multiparameters.nodes

Classes in org.hkijena.jipipe.extensions.multiparameters.nodes with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	MergeParametersAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.omero.algorithms

Classes in org.hkijena.jipipe.extensions.omero.algorithms with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	UploadOMEROImageAlgorithm
class	UploadOMEROTableAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.omnipose.algorithms

Classes in org.hkijena.jipipe.extensions.omnipose.algorithms with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	OmniposeTrainingAlgorithm

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.tables.nodes.annotations

Classes in org.hkijena.jipipe.extensions.tables.nodes.annotations with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	AnnotateDataWithTableValues

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.tables.nodes.merge

Classes in org.hkijena.jipipe.extensions.tables.nodes.merge with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	MergeTableColumnsSupplementAlgorithm Algorithm that integrates columns

Uses of JIPipeInputSlots in org.hkijena.jipipe.extensions.utils.algorithms

Classes in org.hkijena.jipipe.extensions.utils.algorithms with annotations of type JIPipeInputSlots

Modifier and Type	Class and Description
class	UsePlaceholderForMissingDataAlgorithm