Uses of Interface
org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationContext

Packages that use JIPipeIterationContext

Package	Description
org.hkijena.jipipe.api.nodes.algorithm
org.hkijena.jipipe.api.nodes.iterationstep
org.hkijena.jipipe.plugins.annotation.algorithms
org.hkijena.jipipe.plugins.annotation.datasources
org.hkijena.jipipe.plugins.cellpose.algorithms
org.hkijena.jipipe.plugins.cellpose.algorithms.cp2
org.hkijena.jipipe.plugins.cellpose.algorithms.cp3
org.hkijena.jipipe.plugins.cellpose.legacy.algorithms
org.hkijena.jipipe.plugins.clij2
org.hkijena.jipipe.plugins.clij2.algorithms
org.hkijena.jipipe.plugins.filesystem.algorithms.local
org.hkijena.jipipe.plugins.filesystem.algorithms.zarr
org.hkijena.jipipe.plugins.filesystem.datasources
org.hkijena.jipipe.plugins.ij3d.nodes
org.hkijena.jipipe.plugins.ij3d.nodes.binary
org.hkijena.jipipe.plugins.ij3d.nodes.features
org.hkijena.jipipe.plugins.ij3d.nodes.filters
org.hkijena.jipipe.plugins.ij3d.nodes.overlay
org.hkijena.jipipe.plugins.ij3d.nodes.roi3d
org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert
org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter
org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate
org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure
org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.merge
org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata
org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify
org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process
org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split
org.hkijena.jipipe.plugins.ij3d.nodes.segmentation
org.hkijena.jipipe.plugins.ijfilaments.nodes.convert
org.hkijena.jipipe.plugins.ijfilaments.nodes.filter
org.hkijena.jipipe.plugins.ijfilaments.nodes.generate
org.hkijena.jipipe.plugins.ijfilaments.nodes.measure
org.hkijena.jipipe.plugins.ijfilaments.nodes.merge
org.hkijena.jipipe.plugins.ijfilaments.nodes.modify
org.hkijena.jipipe.plugins.ijfilaments.nodes.overlay
org.hkijena.jipipe.plugins.ijfilaments.nodes.process
org.hkijena.jipipe.plugins.ijfilaments.nodes.split
org.hkijena.jipipe.plugins.ijmultitemplatematching
org.hkijena.jipipe.plugins.ijocr.nodes
org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters
org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors
org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots
org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks
org.hkijena.jipipe.plugins.ijweka.nodes
org.hkijena.jipipe.plugins.ilastik.nodes
org.hkijena.jipipe.plugins.imagej2
org.hkijena.jipipe.plugins.imagej2.algorithms
org.hkijena.jipipe.plugins.imagejalgorithms.nodes
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.register
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.sharpen
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform
org.hkijena.jipipe.plugins.imagejdatatypes.algorithms
org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate
org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color
org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io
org.hkijena.jipipe.plugins.imagejdatatypes.converters
org.hkijena.jipipe.plugins.imp.nodes
org.hkijena.jipipe.plugins.multiparameters.nodes
org.hkijena.jipipe.plugins.omero.nodes.annotate
org.hkijena.jipipe.plugins.omero.nodes.datasources
org.hkijena.jipipe.plugins.omero.nodes.download
org.hkijena.jipipe.plugins.omero.nodes.manage
org.hkijena.jipipe.plugins.omero.nodes.navigate
org.hkijena.jipipe.plugins.omero.nodes.upload
org.hkijena.jipipe.plugins.omnipose.algorithms
org.hkijena.jipipe.plugins.omnipose.legacy.algorithms
org.hkijena.jipipe.plugins.opencv.nodes
org.hkijena.jipipe.plugins.opencv.nodes.filters
org.hkijena.jipipe.plugins.opencv.nodes.generators
org.hkijena.jipipe.plugins.plots.nodes
org.hkijena.jipipe.plugins.python.algorithms.jython
org.hkijena.jipipe.plugins.python.algorithms.python
org.hkijena.jipipe.plugins.r.algorithms
org.hkijena.jipipe.plugins.scene3d.nodes
org.hkijena.jipipe.plugins.strings.datasources
org.hkijena.jipipe.plugins.strings.nodes.json
org.hkijena.jipipe.plugins.strings.nodes.text
org.hkijena.jipipe.plugins.strings.nodes.xml
org.hkijena.jipipe.plugins.tables.nodes
org.hkijena.jipipe.plugins.tables.nodes.annotations
org.hkijena.jipipe.plugins.tables.nodes.columns
org.hkijena.jipipe.plugins.tables.nodes.filter
org.hkijena.jipipe.plugins.tables.nodes.merge
org.hkijena.jipipe.plugins.tables.nodes.rows
org.hkijena.jipipe.plugins.tables.nodes.split
org.hkijena.jipipe.plugins.tables.nodes.statistics
org.hkijena.jipipe.plugins.tables.nodes.transform
org.hkijena.jipipe.plugins.utils.algorithms
org.hkijena.jipipe.plugins.utils.algorithms.datatable
org.hkijena.jipipe.plugins.utils.algorithms.distribute
org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps
org.hkijena.jipipe.plugins.utils.algorithms.meta
org.hkijena.jipipe.plugins.utils.algorithms.processes

Uses of JIPipeIterationContext in org.hkijena.jipipe.api.nodes.algorithm

Methods in org.hkijena.jipipe.api.nodes.algorithm with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	JIPipeIteratingMissingDataGeneratorAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Runs code on one data row
protected abstract void	JIPipeSingleIterationAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Runs code on one data row
protected abstract void	JIPipeMergingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Runs code on one data row
protected void	JIPipeMissingDataGeneratorAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeProgressInfo progressInfo) Runs code on one data row
protected abstract void	JIPipeSimpleIteratingAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Runs code on one data row
protected abstract void	JIPipeIteratingAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Runs code on one data row
protected abstract void	JIPipeParameterlessSimpleIteratingAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeProgressInfo progressInfo) Runs code on one data row

Uses of JIPipeIterationContext in org.hkijena.jipipe.api.nodes.iterationstep

Classes in org.hkijena.jipipe.api.nodes.iterationstep that implement JIPipeIterationContext

Modifier and Type	Class and Description
class	JIPipeMutableIterationContext

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.annotation.algorithms

Methods in org.hkijena.jipipe.plugins.annotation.algorithms with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ConvertToAnnotationTable.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RenameDataAnnotation.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractAndReplaceAnnotation.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractDataAnnotation.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterByAnnotationIfElse.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateByExpression.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateWithData.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DataAnnotationToStringAnnotation.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	GenerateUniqueAnnotation.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RemoveAnnotationAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateByProjectPaths.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ModifyAnnotationScript.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RemoveDataAnnotations.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RenameAnnotation.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateWithSourceSlot.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateWithDataString.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OverwriteAnnotations.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SplitByAnnotationScript.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeAnnotations.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetSingleAnnotation.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SimplifyAnnotationsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.annotation.datasources

Methods in org.hkijena.jipipe.plugins.annotation.datasources with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	AnnotationTableFromFile.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.cellpose.algorithms

Methods in org.hkijena.jipipe.plugins.cellpose.algorithms with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ImportCellposeSizeModelFromFileAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportCellposeModelFromFileAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.cellpose.algorithms.cp2

Methods in org.hkijena.jipipe.plugins.cellpose.algorithms.cp2 with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	Cellpose2SegmentationInferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Cellpose2TrainingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportPretrainedCellpose2ModelAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.cellpose.algorithms.cp3

Methods in org.hkijena.jipipe.plugins.cellpose.algorithms.cp3 with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	Cellpose3DenoiseInferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Cellpose3SegmentationInferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Cellpose3SegmentationTrainingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Cellpose3DenoiseTrainingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportPretrainedCellpose3DenoiseModelAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportPretrainedCellpose3SegmentationModelAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.cellpose.legacy.algorithms

Methods in org.hkijena.jipipe.plugins.cellpose.legacy.algorithms with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	Cellpose1TrainingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	LegacyCellpose2InferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	LegacyCellpose2TrainingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	Cellpose1InferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	ImportLegacyCellposeSizeModelAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	ImportLegacyCellposeModelAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.clij2

Methods in org.hkijena.jipipe.plugins.clij2 with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	CLIJCommandNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.clij2.algorithms

Methods in org.hkijena.jipipe.plugins.clij2.algorithms with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	Clij2ExecuteKernelIterating.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Clij2ExecuteKernelSimpleIterating.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Clij2PushAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Clij2PullAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Methods in org.hkijena.jipipe.plugins.filesystem.algorithms.local with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ExportDataTable.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExportDataTableByParameter.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CopyPath.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConcatenatePaths.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotationToPath.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExportData.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportDataTableDirectory.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RelativizePaths.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ModifyPathWithExpression.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterPaths.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertToExportedPath.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractFileName.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ModifyPath.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SimplePathAnnotationGenerator.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotationTableToPaths.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExportDataByParameter2.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CreateDirectory.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConcatenateByParameter.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ListSubfolders.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SimpleFolderAnnotationGenerator.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ListFiles.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SimpleFileAnnotationGenerator.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RenameByString.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractParent.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportDataRowFolder.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportDataTableArchive.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertDataToOutputPath.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateWithPathProperties.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RelativizeByParameter.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.filesystem.algorithms.zarr

Methods in org.hkijena.jipipe.plugins.filesystem.algorithms.zarr with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ListZARRURIDatasetsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ListZARRDirectoryZIPDatasetsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.filesystem.datasources

Methods in org.hkijena.jipipe.plugins.filesystem.datasources with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ProjectUserFolderDataSource.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	PathFromUserDataSource.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DownloadFilesDataSource.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	URIListDataSource.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ij3d.nodes

Methods in org.hkijena.jipipe.plugins.ij3d.nodes with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ImportROI3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ij3d.nodes.binary

Methods in org.hkijena.jipipe.plugins.ij3d.nodes.binary with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	Voronoi3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Watershed3DSplittingAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DistanceMap3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ErodedVolumeFraction3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ij3d.nodes.features

Methods in org.hkijena.jipipe.plugins.ij3d.nodes.features with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	FindMaxima3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SymmetryFilter3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	EdgeFilter3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ij3d.nodes.filters

Methods in org.hkijena.jipipe.plugins.ij3d.nodes.filters with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	Fast3DFiltersAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ij3d.nodes.overlay

Methods in org.hkijena.jipipe.plugins.ij3d.nodes.overlay with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ExtractOverlay3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetOverlay3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RemoveOverlay3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RenderOverlay3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d

Methods in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ExportROI3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	ExportROI3DAlgorithm2.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert

Methods in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.convert with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	Roi3DToMaskAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Roi3DToRoi2DConverterAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Roi3DToRGBAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Roi3DToLabelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Roi3DTo3DMeshAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Roi2DToRoi3DConverterAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter

Methods in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.filter with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	FilterRoi3DListsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterRoi3DByOverlapAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterRoi3DByStatisticsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate

Methods in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.generate with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	Roi3DFromLabelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FindParticles3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure

Methods in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.measure with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ExtractRoi3DStatisticsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractRoi3DRelationStatisticsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.merge

Methods in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.merge with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	MergeROI3DAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata

Methods in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.metadata with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	RemoveROI3DMetadataAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetROI3DMetadataFromTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractROI3DMetadataAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify

Methods in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.modify with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ColorRoi3DByStatisticsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ColorRoi3DByNameAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ChangeRoi3DPropertiesFromExpressionsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ROI3DCalculatorAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ChangeRoi3DPropertiesFromTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ChangeRoi3DPropertiesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process

Methods in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.process with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	OutlineRoi3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RemoveBorderRoi3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split

Methods in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.split with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	SplitRoi3DIntoConnectedComponentsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExplodeRoi3DListAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ij3d.nodes.segmentation

Methods in org.hkijena.jipipe.plugins.ij3d.nodes.segmentation with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	SpotSegmentation3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Watershed3DSegmentationAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	HysteresisSegmentation3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	IterativeThreshold3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	NucleiSegmentation3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ijfilaments.nodes.convert

Methods in org.hkijena.jipipe.plugins.ijfilaments.nodes.convert with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ConvertFilamentsToLabels2Algorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertFilamentsToRoi3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertFilamentsTo3DMeshAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertFilamentsToRGBAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertFilamentsToMaskAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertFilamentsToLabelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertROIToFilamentsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertFilamentsToRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertFilamentCyclesToROIAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ijfilaments.nodes.filter

Methods in org.hkijena.jipipe.plugins.ijfilaments.nodes.filter with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	FilterFilamentVerticesByProperties.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterFilamentEdgesByProperties.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RemoveBorderFilaments.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterFilamentsByProperties.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ijfilaments.nodes.generate

Methods in org.hkijena.jipipe.plugins.ijfilaments.nodes.generate with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	SkeletonToFilaments3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SkeletonToFilaments2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SkeletonToSimplifiedFilamentsFijiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportFilamentsFromJsonAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TSOAXResultAnalysisAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TSOAX3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TSOAX2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ijfilaments.nodes.measure

Methods in org.hkijena.jipipe.plugins.ijfilaments.nodes.measure with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	MeasureEdgesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MeasureFilamentsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MeasureVerticesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ijfilaments.nodes.merge

Methods in org.hkijena.jipipe.plugins.ijfilaments.nodes.merge with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	MergeFilamentsAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify

Methods in org.hkijena.jipipe.plugins.ijfilaments.nodes.modify with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	RemoveVertexValueBackupsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilamentCyclesToComponentsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ChangeFilamentVertexPropertiesExpressionAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SubdivideFilamentEdges.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetVertexRadiusFromImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConnectVerticesFastAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ErodeEndVerticesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RestoreVertexValueBackupAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FindLinearFilamentVertexOrderAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetVertexValueFromImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConnectVerticesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ChangeFilamentVertexPropertiesManuallyAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetVertexMetadataFromImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ChangeFilamentEdgePropertiesExpressionAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	GrowEndVerticesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetFilamentMetadataToComponentIndexAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ChangeFilamentEdgePropertiesManuallyAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FlattenFilamentsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetVertexPhysicalSizeFromImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ijfilaments.nodes.overlay

Methods in org.hkijena.jipipe.plugins.ijfilaments.nodes.overlay with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	SetOverlayFilamentsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ijfilaments.nodes.process

Methods in org.hkijena.jipipe.plugins.ijfilaments.nodes.process with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	RemoveDuplicateVerticesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SimplifyFilamentsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CopyFilamentsAcrossZCTAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SmoothFilamentsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FixOverlapsNonBranchingAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ijfilaments.nodes.split

Methods in org.hkijena.jipipe.plugins.ijfilaments.nodes.split with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	SplitFilamentsIntoCyclesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SplitFilamentsIntoConnectedComponentsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ijmultitemplatematching

Methods in org.hkijena.jipipe.plugins.ijmultitemplatematching with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	MultiTemplateMatchingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ijocr.nodes

Methods in org.hkijena.jipipe.plugins.ijocr.nodes with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	TesseractOCRAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters

Methods in org.hkijena.jipipe.plugins.ijtrackmate.nodes.converters with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ConvertSpotsToRoiNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertTracksToRoiNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors

Methods in org.hkijena.jipipe.plugins.ijtrackmate.nodes.detectors with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	CreateSpotTrackerNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CreateSpotDetectorNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots

Methods in org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	MergeSpotsNode.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SpotsToRGBNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MeasureSpotsNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SplitSpotsNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SpotDetectorNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SpotFilterNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks

Methods in org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	MergeTracksNode.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MeasureEdgesNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TracksToRGBNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SplitTracksNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TrackingNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TrackFilterNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FollowSpotsPerTrackNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MeasureTracksNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TrackSchemeRendererNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MeasureBranchesNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ijweka.nodes

Methods in org.hkijena.jipipe.plugins.ijweka.nodes with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	WekaTrainingMask2DAlgorithm2.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	WekaTrainingLabels2DAlgorithm2.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	WekaTrainingLabels2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	WekaTrainingROI3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportWekaModelFromFileAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	WekaClassification3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	WekaClassification2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	WekaTrainingMask2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	WekaTrainingROI2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.ilastik.nodes

Methods in org.hkijena.jipipe.plugins.ilastik.nodes with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	IlastikAutoContextAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	IlastikPredictionMapsObjectClassificationAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	IlastikSegmentationImageObjectClassificationAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	IlastikPixelClassificationAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	IlastikObjectClassificationAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportIlastikModel.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExportIlastikHDF5ImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportIlastikHDF5ImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagej2

Methods in org.hkijena.jipipe.plugins.imagej2 with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ImageJ2OpNode.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagej2.algorithms

Methods in org.hkijena.jipipe.plugins.imagej2.algorithms with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	CreateIJ2ShapeAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CreateIJ2OutOfBoundsFactoryAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	MacroWrapperAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.analyze with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	AnalyzeSkeleton2D3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImageStatisticsExpressionAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateByImageStatisticsExpressionAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImageStatisticsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OrientationVectorField2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FindParticles2D.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.background with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	RollingBallBackgroundEstimator2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.binary with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ConnectedComponentsLabeling2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvexifyAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Voronoi2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConnectedComponentsLabeling3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	BitwiseLogicalOperationAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConditionalInverterAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	KeepLargestRegionAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DistanceTransformWatershed2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	BinarizeAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	UltimateErodedPoints2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RemoveLargestRegionAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	VolumeOpening3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	VolumeOpening2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.blur with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	BoxFilter2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	GaussianBlur3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MedianBlurGreyscale8U2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	BoxFilter3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MedianBlurRGB2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	GaussianBlur2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MedianBlurFilter2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MedianBlurFilter3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.calibration with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	SetPhysicalDimensionsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DrawScaleBarAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetPhysicalDimensionsByExpressionsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CopyPhysicalDimensionsBetweenImagesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetPhysicalDimensionsByAnnotationsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.colocalization with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	Coloc2Node.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.color with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ArrangeChannelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RenderImageToRGBAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeHSBChannelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	InvertColorsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SplitRGBChannelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	NewSplitChannelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CombineChannelsToRGBAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ColorToGreyscaleExpression2D.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SplitChannelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	MergeLABChannelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SplitChannelsByTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeChannelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OverlayImagesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	BlendImagesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeRGBChannelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.contrast with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	IlluminationCorrection2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CLAHEContrastEnhancer.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	HistogramContrastEnhancerAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImageJContrastEnhancerAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convert with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ConvertImageTo8BitAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TableToImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertImageTo8BitAutoContrastAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TableColumnToImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImageToTableColumnAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertImageToHSBAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertImageToRGBAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MultipleImagesToTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertImageTo16BitAutoContrastAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MatrixToImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImageToMatrixAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImageToTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertImageTo32BitAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertImageToLABAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertImageTo16BitAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.convolve with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ConvolveByParameter2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvolveByImage2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.datasources with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	OMEImageFromImagePlus.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImageStackFromFolder.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.detect with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	FastCircularHoughSegmentation2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CornerHarris2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LinesHoughDetection2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	GlobalLinesHoughDetection2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LineSegmentsHoughDetection2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CircularHoughSegmentation2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	Merge2DToHyperstackAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CreateStackAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	StackToDimensionMergerAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	NewZProjectorAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	HyperstackSlicerAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	StackTo2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	StackToDimensionMerger2Algorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExpressionSlicerAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	StackInverterAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ReorderHyperstackSlicesExpressionAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ResliceAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SplitByDimensionAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ZProjectorAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	StackSplitterAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	StackCombinerAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ReorderDimensionsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.edge with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	LaplacianEdgeDetectorAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CannyEdgeDetectorAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SobelEdgeDetectorAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.features with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	DifferenceOfGaussian2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	HessianFeatureAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LocalMaxima2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AlternatingMorphologicalFilters2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MorphologicalFeatureContrast2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DirectionalFilter2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FrangiVesselnessFeatures.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MeijeringVesselness2DFeatures.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OrientationFeatures2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LaplacianOfGaussian2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MorphologicalTextureContrast2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DerivativesFeaturesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	StructureFeatureAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.fft with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	FFT2DSwapQuadrants.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FFTCustomFilter.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FFT2DInverseTransform.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FFTBandPassFilter.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FFT2DForwardTransform.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ImageFromMatrix2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	GenerateStructureElement2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	GenerateStructureElement3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	GenerateZeroImage.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	GenerateLUTImageFromColorMap.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ExportTableAsXLSXAlgorithm2.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RunImageJExporterAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExportTableAsXLSXAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	ROIToGUI.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExportROIAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	ExportImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	ImagePlusFromGUI.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RunImageJImporterAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExportTableAlgorithm2.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ResultsTableFromGUI.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExportROIAlgorithm2.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ROIFromGUI.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExportTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	ExportImageDirectorySlotAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ResultsTableToGUI.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImagePlusToGUI.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExportImage2Algorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	OverlapMeasureLabelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ReplaceLabelsByTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	GetLabelBoundariesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeLabelsToThicknessAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeSmallLabelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateWithOverlapMeasureLabelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RemapLabelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LabelsToRGBAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeLabelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LabelsToMaskAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LabelsToROIAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExpandLabelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SeparateLabelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SeparateTouchingLabels2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CropLabelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractLabelStatisticsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DilateLabelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SplitLabelsConnectedComponents2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ReplaceLabelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeLabelsToBinsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	KeepLargestLabelAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.labels.filter with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	RemoveBorderLabelsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterLabelsByIdAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterLabelsByExpression2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterLabelsByOverlapAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterLabelsByStatisticsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterLabelsByMaskAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RemoveLargestLabelAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterLabelsByThicknessAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterLabelsByExpression3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.lut with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ApplyLUTAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetLUTFromColorsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetLUTFromColorMapAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LUTInverterAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetLUTFromImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RemoveLUTAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.masking with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	SetToValueAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetToContentAwareAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetToColorAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	LegacyImageCalculator2DMergingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	ImageComparer2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	FastImageArithmeticsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ApplyVectorMathExpression2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DivideByMaximumAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ApplyTransform2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LegacyImageCalculator2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	ImageCalculator2DExpression.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	GenerateVectorFromMathExpression.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RemoveNaNFilter2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Hessian2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	ApplyMathExpression2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ApplyColorMathExpression2DExpression.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LegacyApplyMath2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	GenerateFromMathExpression2D.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RoundFloatImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.distancemap with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	GeodesicDistanceMap2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ChamferDistanceMap3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ChamferDistanceMap2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ApplyDistanceTransform2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LabelChamferDistanceMap3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math.local with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	LocalMaximumFilter3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RegionalMinima3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LocalMinimumFilter3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LocalMinimumFilter2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LocalVarianceFilter3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImposeMaxima2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LocalVarianceFilter2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LocalMaximumFilter2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtendedMinima3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RegionalMaxima3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RegionalMaxima2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImposeMaxima3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtendedMaxima2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtendedMaxima3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RegionalMinima2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LocalImageCalculator2DExpression.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtendedMinima2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.metadata with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	RemoveImageMetadataAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetImageMetadataFromTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractImageMetadataAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ChangeImageMetadataFromExpressionsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.misc with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	DataToPreviewAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RenderJIPipeProjectAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	InputImagesToMontage2.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	InputImagesToMontage.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	MontageToStackAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	StackToMontage2Algorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	StackToMontageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.morphology with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	GrayscaleAttributeFiltering2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	GrayscaleAttributeFiltering3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MorphologyBinary2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MorphologicalReconstruction3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MorphologySkeletonize2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MorphologyInternalGradient2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FindHoles2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Morphology3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Morphology2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MorphologicalReconstruction2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MorphologyFillHoles2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MorphologyOutline2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MorphologySkeletonize3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.noise with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	AddSaltAndPepperNoise2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AddNoise2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RemoveOutliersFilter2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DespeckleFilter2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.ome with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	OMEMetadataToTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractOMEXMLAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateOMEWithMetadataAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractOMEROIAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.opticalflow with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	MSEGaussianFlowAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	PMCCBlockFlowAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MSEBlockFlowAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.overlay with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	SetOverlayAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractOverlayAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RenderOverlayAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RemoveOverlayAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.simple with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	SimpleImageRegistrationAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.registration.turboreg with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	TurboRegRegistration2DReferencedAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TurboRegRegistration2DSingleAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	CropToRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.annotations with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	RoiPropertiesToAnnotationsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	AssembleExtractedROIAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractFromROIAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.convert with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	RoiToRGBAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RoiToMaskAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	UnreferencedRoiToMaskAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractImageInRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ROIToLabelsByNameAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ROIToLabelsExpressionAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	GetRoiImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	UnreferencedRoiToRGBAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.draw with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	DrawTextRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DrawScaleBarRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DrawRectangleRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	DrawOvalRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	DrawLineOvalRectangleRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.filter with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	RemoveBorderRoisAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterRoiByStatisticsScriptAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterRoiByNameAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterROIListsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SliceROIListAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterRoiByStatisticsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterROIByOverlapAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	TableToPointROIAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TableToRectangularROIAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TableToLineROIAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TableToCircularROIAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TableToTextROIAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ReferencedAppendRectangularRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	MaskToRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AppendRectangularRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	ReferencedDefineRectangularRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	CountROIAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractROIProfileAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RoiStatisticsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractRoi2DRelationStatisticsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	MergeRoiListsOrderedAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeRoiListsUnorderedAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeRoiListsPairwiseOrAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterAndMergeRoiByStatisticsScriptAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.modify with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	FlattenRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ChangeRoiPropertiesFromAnnotationsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ScaleRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RotateRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	EnlargeShrinkRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ColorRoiByNameAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetRoiImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OutlineRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ChangeRoiPropertiesFromExpressionsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RoiFloodFillAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RoiToCentroidAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ReorderRoiDimensionsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RoiCalculatorAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OutlineRoiConcaveHullMoreiraSantosAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ChangeRoiPropertiesFromTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ColorRoiByStatisticsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	UnsetRoiImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CropRoiListAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ChangeRoiPropertiesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.properties with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	SetROIMetadataFromTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RemoveROIMetadataAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetRoiMetadataByStatisticsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractROIMetadataAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.register

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.register with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	RegisterRoiToImageByBrightnessAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.sort with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	SortRoiListByExpressionsAndMeasurementsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SortAndExtractRoiByStatisticsAlgorithm2.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SortAndExtractRoiByStatisticsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.split with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	SplitRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExplodeRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SplitRoiConnectedComponentsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.segment with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ClassicWatershedSegmentationAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RidgeDetector2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SeededWatershedSegmentationAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.sharpen

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.sharpen with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	LaplacianSharpen2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.statistics with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	AverageKeyValueThresholdStatisticsGenerator.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	KeyValueThresholdPartitionAveragesGenerator.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	KeyValueThresholdPartitionGenerator.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	KeyValueHistogramGenerator.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	KeyValueAveragesGenerator.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	KeyValueThresholdStatisticsGenerator.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	HistogramGenerator.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FastKeyValueThresholdStatisticsGenerator.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	CustomAutoThreshold2D8Uv2Algorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CustomAutoThreshold2D16Uv2Algorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ManualThreshold32F2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CustomAutoThreshold2D32FAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CustomAutoThreshold2D32Fv2Algorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CustomAutoThreshold2D16UAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	InternalGradientSegmentation2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ManualThreshold16U2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AutoThreshold2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ThresholdByAnnotation2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ManualThreshold8U2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	BrightSpotsSegmentation2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	PercentileThreshold8U2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CustomAutoThreshold2D8UAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	HessianSegmentation2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.color with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ManualRGBThreshold2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ManualLABThreshold2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ManualHSBThreshold2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ColorThresholdExpression2D.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.iterative with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	IterativeThresholdByROIStatistics2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.threshold.local with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	PhansalkarLocalAutoThreshold2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SauvolaLocalAutoThreshold2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	BernsenLocalAutoThreshold2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	NiblackLocalAutoThreshold2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ContrastLocalAutoThreshold2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LocalAutoThreshold2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	UnTileImage2DAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TransformEqualCanvasSize2DAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TransformEqualizeDimensionsToMaxAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TileImage2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	TransformRotateFree2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Warp2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TransformCrop2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AddBorder2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TransformRotate2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LineMirror2DFromRoiAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TransformSetHyperstackDimensionsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TileImage2Dv2Algorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TransformEqualizeDimensionsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TransformScale3DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TransformScale2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TransformExpandCanvas2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TransformFlip2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	LineMirror2DFromExpressionsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeImagesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms

Methods in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ApplyDisplayContrastAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DisplayRangeCalibrationAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractRoi2DFromOMEImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetBioFormatsExporterSettings.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate

Methods in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.annotate with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	AnnotateDataWithImagePropertiesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImagePropertiesToAnnotationAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	BioFormatsAnnotatorAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color

Methods in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.color with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ColorSpaceConverterAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io

Methods in org.hkijena.jipipe.plugins.imagejdatatypes.algorithms.io with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	BioFormatsImporterAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportOMEZARRFromURIAsImagePlusAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	BioFormatsExporterAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	ImportResultsTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportRoi2DAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExportImagePlusAsOMEZARRAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	BioFormatsExporter2Algorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportOMEZARRFromZipDirectoryAsImagePlusAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportImagePlusAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportLUTAsRGBFromFileAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportImageJSampleAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imagejdatatypes.converters

Methods in org.hkijena.jipipe.plugins.imagejdatatypes.converters with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ImageTypeConverter.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.imp.nodes

Methods in org.hkijena.jipipe.plugins.imp.nodes with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ImportImpImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SetImpAlphaChannelAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertImpImageToImagePlusAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SplitImpAlphaChannelAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExportImpImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.multiparameters.nodes

Methods in org.hkijena.jipipe.plugins.multiparameters.nodes with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ConvertParametersToTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	GenerateParametersFromExpressionAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DefineParametersFromGlobalParametersAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DefineParametersFromTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeParametersAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotationsToParametersAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeProgressInfo progressInfo)
protected void	ParametersToAnnotationsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.omero.nodes.annotate

Methods in org.hkijena.jipipe.plugins.omero.nodes.annotate with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	AnnotateOMEROScreenReferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateOMEROWellReferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateOMEROPlateReferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateOMEROProjectReferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateOMEROImageReferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateOMERODatasetReferenceAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.omero.nodes.datasources

Methods in org.hkijena.jipipe.plugins.omero.nodes.datasources with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	OMEROGroupReferenceDataSource.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMERODatasetReferenceDataSource.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROPlateReferenceDataSource.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROScreenReferenceDataSource.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROProjectReferenceDataSource.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROWellReferenceDataSource.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROImageReferenceDataSource.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.omero.nodes.download

Methods in org.hkijena.jipipe.plugins.omero.nodes.download with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	DownloadOMEROTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DownloadOMEROImageAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.omero.nodes.manage

Methods in org.hkijena.jipipe.plugins.omero.nodes.manage with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	OMEROCreateDatasetAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.omero.nodes.navigate

Methods in org.hkijena.jipipe.plugins.omero.nodes.navigate with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	OMEROListDatasetsAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROListWellsAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROListGroupsAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROListWellImagesAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROListScreensAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROListProjectsAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROListPlatesAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROListDatasetImagesAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.omero.nodes.upload

Methods in org.hkijena.jipipe.plugins.omero.nodes.upload with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	UploadOMEROImageToDatasetAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	UploadOMEROTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.omnipose.algorithms

Methods in org.hkijena.jipipe.plugins.omnipose.algorithms with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	Omnipose0TrainingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Omnipose0InferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportPretrainedOmnipose0ModelAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.omnipose.legacy.algorithms

Methods in org.hkijena.jipipe.plugins.omnipose.legacy.algorithms with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	LegacyOmnipose0TrainingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	LegacyOmnipose0InferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.opencv.nodes

Methods in org.hkijena.jipipe.plugins.opencv.nodes with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ConvertDepthAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	InpaintingAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertTypeAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.opencv.nodes.filters

Methods in org.hkijena.jipipe.plugins.opencv.nodes.filters with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	BilateralFilterAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.opencv.nodes.generators

Methods in org.hkijena.jipipe.plugins.opencv.nodes.generators with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	GaussianKernelGenerator.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	GaborKernelGenerator.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.plots.nodes

Methods in org.hkijena.jipipe.plugins.plots.nodes with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	PlotTablesAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	PlotTables2Algorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.python.algorithms.jython

Methods in org.hkijena.jipipe.plugins.python.algorithms.jython with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	MergingJythonScriptAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SimpleIteratingJythonScriptAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	IteratingJythonScriptAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.python.algorithms.python

Methods in org.hkijena.jipipe.plugins.python.algorithms.python with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	MergingPythonScriptAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	IteratingPythonScriptAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.r.algorithms

Methods in org.hkijena.jipipe.plugins.r.algorithms with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	MergingRScriptAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportRDatasetAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	IteratingRScriptAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.scene3d.nodes

Methods in org.hkijena.jipipe.plugins.scene3d.nodes with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	MergeScenesAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CreateLineMeshAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MaskTo3DMeshAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExportScene3DToColladaAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	GroupSceneAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExportScene3DToColladaAlgorithm2.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CreateSphereMeshAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.strings.datasources

Methods in org.hkijena.jipipe.plugins.strings.datasources with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ImportJsonAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportXMLAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportStringAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	StringDefinitionDataSource.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.strings.nodes.json

Methods in org.hkijena.jipipe.plugins.strings.nodes.json with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ExtractTextFromJsonAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateWithJsonDataAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractJsonDataAsTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.strings.nodes.text

Methods in org.hkijena.jipipe.plugins.strings.nodes.text with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	TextDataToTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TableToCSVTextAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ProcessTextDataAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateWithTextDataAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.strings.nodes.xml

Methods in org.hkijena.jipipe.plugins.strings.nodes.xml with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ExtractTextFromXMLAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExtractXPathDataAsTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	PrettifyXMLAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateWithXPathDataAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.tables.nodes

Methods in org.hkijena.jipipe.plugins.tables.nodes with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	GenerateTableFromExpressionAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ModifyTablesScript.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	IntegrateColumnsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ModifyTableColumnNamesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	GenerateColumnAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.tables.nodes.annotations

Methods in org.hkijena.jipipe.plugins.tables.nodes.annotations with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	AnnotateByTablePropertiesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConvertAnnotationTableToAnnotatedTables.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AddAnnotationColumnsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateDataWithTableValues.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.tables.nodes.columns

Methods in org.hkijena.jipipe.plugins.tables.nodes.columns with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ConvertColumnsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ColumnsToAnnotationsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ColumnToStringAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ApplyExpressionToTableByColumnAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RemoveColumnAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RenameSingleColumnsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ColumnToNumericAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SortTableColumnsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ApplyExpressionToColumnsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	RenameTableColumnsToAnnotationAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RenameTableColumns2Algorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RenameTableColumnsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.tables.nodes.filter

Methods in org.hkijena.jipipe.plugins.tables.nodes.filter with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	FilterTableRowsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SliceTableRowsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FilterTablesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.tables.nodes.merge

Methods in org.hkijena.jipipe.plugins.tables.nodes.merge with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	MergeColumnsAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeTableRowsAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeTableColumnsSimpleAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeTableColumnsSupplementMergingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeTableColumnsSupplementAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.tables.nodes.rows

Methods in org.hkijena.jipipe.plugins.tables.nodes.rows with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	ApplyExpressionPerRowAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	AddMissingRowsInSeriesAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ApplyExpressionPerRowAlgorithm2.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SortTableRowsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.tables.nodes.split

Methods in org.hkijena.jipipe.plugins.tables.nodes.split with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	SplitTableIntoColumnsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SplitTableIntoRowsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SplitTableByColumnsAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.tables.nodes.statistics

Methods in org.hkijena.jipipe.plugins.tables.nodes.statistics with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	DBSCANClusteringAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	FuzzyKMeansClusteringAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	KMeansClusteringAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.tables.nodes.transform

Methods in org.hkijena.jipipe.plugins.tables.nodes.transform with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	MeltTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TableToHistogramAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	ApplyExpressionPerLabelAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	UnMeltTableAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TableToHistogram2Algorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.utils.algorithms

Methods in org.hkijena.jipipe.plugins.utils.algorithms with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	IterationStepSlicer.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DuplicateDataAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ConverterAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RunExpressionAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ToDataStringAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ImportJIPipeSlotFolderAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.utils.algorithms.datatable

Methods in org.hkijena.jipipe.plugins.utils.algorithms.datatable with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	MergeDataToTableAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateWithDataTableProperties.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	PullDataTableAnnotations.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	PushDataTableAnnotations.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.utils.algorithms.distribute

Methods in org.hkijena.jipipe.plugins.utils.algorithms.distribute with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	DistributeDataRandomlyByCountAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DistributeDataRandomlyByPercentageAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps

Methods in org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	MultiIterationStepCheckerAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CrasherAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	SingleIterationStepCheckerAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.utils.algorithms.meta

Methods in org.hkijena.jipipe.plugins.utils.algorithms.meta with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	RunJIPipeProjectAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	PathsToJIPipeProjectParametersAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	GetJIPipeSlotFolderAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeIterationContext in org.hkijena.jipipe.plugins.utils.algorithms.processes

Methods in org.hkijena.jipipe.plugins.utils.algorithms.processes with parameters of type JIPipeIterationContext

Modifier and Type	Method and Description
protected void	RunProcessMergingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RunProcessIteratingAlgorithm.runIteration(JIPipeSingleIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)