Recommended installation method
We recommend to use our JIPipe launcher application that will apply all steps automatically by just double-clicking a file. Please refer to the system-specific instructions for more information.
We also provide offline packages that will require no additional downloads:
Alternative installation methods
You can install JIPipe into an existing Fiji installation via the ImageJ Updater or by manually copying the plugin files.
Additional downloads
The following links and downloads are related to JIPipe:
Source code
The software is Open Source and licensed under BSD-2-Clause. You can find the source code on GitHub at https://github.com/applied-systems-biology/jipipe.
Logos
If you need the JIPipe logo for presentations, posters, or publications, feel free to download the logo package. It contains the JIPipe logos (text plus logo, square logo) in PNG and SVG formats.