Skip navigation links
A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 

A

a0 - Variable in class org.hkijena.jipipe.ui.grapheditor.general.connections.RectangularLine
 
a1 - Variable in class org.hkijena.jipipe.ui.grapheditor.general.connections.RectangularLine
 
AbsoluteColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a abs(x) function
AbsoluteColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.AbsoluteColumnOperation
 
absoluteToJIPipeUserDirRelative(Path) - Static method in class org.hkijena.jipipe.utils.PathUtils
 
AbstractExpressionParameter - Class in org.hkijena.jipipe.extensions.expressions
A parameter that contains an expression.
AbstractExpressionParameter() - Constructor for class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
 
AbstractExpressionParameter(String) - Constructor for class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
 
AbstractExpressionParameter(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
 
AbstractJIPipeEvent - Class in org.hkijena.jipipe.api.events
 
AbstractJIPipeEvent(Object) - Constructor for class org.hkijena.jipipe.api.events.AbstractJIPipeEvent
 
AbstractJIPipeParameterCollection - Class in org.hkijena.jipipe.api.parameters
JIPipeParameterCollection that implements the event emitters
AbstractJIPipeParameterCollection() - Constructor for class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection
 
AbstractJIPipeRunnable - Class in org.hkijena.jipipe.api
Abstract base class for implementing JIPipeRunnable
AbstractJIPipeRunnable() - Constructor for class org.hkijena.jipipe.api.AbstractJIPipeRunnable
 
AbstractPathImageJDataExporterUI - Class in org.hkijena.jipipe.api.compat.ui
Exporter UI that changes the activation state and the name (based on a path)
AbstractPathImageJDataExporterUI(JIPipeWorkbench, ImageJDataExportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ui.AbstractPathImageJDataExporterUI
 
AbstractPathImageJDataImporterUI - Class in org.hkijena.jipipe.api.compat.ui
Importer UI that represents the name as path
AbstractPathImageJDataImporterUI(JIPipeWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ui.AbstractPathImageJDataImporterUI
 
AbstractTextBoxAnnotationGraphNode - Class in org.hkijena.jipipe.extensions.graphannotation.nodes
 
AbstractTextBoxAnnotationGraphNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode
 
AbstractTextBoxAnnotationGraphNode(AbstractTextBoxAnnotationGraphNode) - Constructor for class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode
 
AbstractTextBoxAnnotationGraphNode.TextLocationParameters - Class in org.hkijena.jipipe.extensions.graphannotation.nodes
 
AbstractTextBoxAnnotationGraphNode.TextRenderParameters - Class in org.hkijena.jipipe.extensions.graphannotation.nodes
 
accept(JIPipeWorkbench) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterCollectionContextAction
 
accept(Object) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDummyParameterCollection
 
accept(JIPipeWorkbench) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterCollectionContextAction
 
accept(JIPipeGraphCanvasUI) - Method in class org.hkijena.jipipe.ui.grapheditor.general.layout.MSTGraphAutoLayoutMethod
 
accept(JIPipeGraphCanvasUI) - Method in class org.hkijena.jipipe.ui.grapheditor.general.layout.SugiyamaGraphAutoLayoutMethod
 
accept(T, U, V) - Method in interface org.hkijena.jipipe.utils.TriConsumer
Performs this operation on the given arguments.
accepts(JIPipeData) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Returns true if the slot can carry the provided data.
accepts(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Returns true if the slot can carry the provided data.
acceptsTrivially(JIPipeData) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Returns true if the slot can carry the provided data.
acceptsTrivially(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Returns true if the slot can carry the provided data.
accessEquals(JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameterEditorUI.ExternalEditor
 
AccumulateFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
AccumulateFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.AccumulateFunction
 
Action(Component, int, Insets) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Action
 
Action(List<Component>, int, Insets) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Action
 
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.extensions.ilastik.RunIlastikMenuExtension
 
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.extensions.parameters.ExpressionTesterJIPipeMenuExtension
 
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.extensions.parameters.ParameterTesterJIPipeMenuExtension
 
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.extensions.plots.NewPlotJIPipeMenuExtension
 
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.extensions.tables.NewTableJIPipeMenuExtension
 
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.ui.components.ColorChooserButton
 
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor.StrikeThroughAction
Toggles the strikethrough attribute.
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor.SubscriptAction
Toggles the strikethrough attribute.
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor.SuperscriptAction
Toggles the strikethrough attribute.
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
activate() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
activate() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool
 
activate() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
activate() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool
 
activate() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
activate() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
activate() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
activate() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
ActivateAndApplyUpdateSiteRun - Class in org.hkijena.jipipe.ui.extensions
 
ActivateAndApplyUpdateSiteRun(JIPipeModernPluginManager, List<UpdateSite>) - Constructor for class org.hkijena.jipipe.ui.extensions.ActivateAndApplyUpdateSiteRun
 
ActivateDependenciesConfirmationDialog - Class in org.hkijena.jipipe.ui.extensions
 
ActivateDependenciesConfirmationDialog(Component, JIPipeModernPluginManager, JIPipePlugin, Set<JIPipeDependency>, Set<JIPipeImageJUpdateSiteDependency>) - Constructor for class org.hkijena.jipipe.ui.extensions.ActivateDependenciesConfirmationDialog
 
activateExtension(JIPipePlugin) - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager
 
ActivateUpdateSiteRun - Class in org.hkijena.jipipe.ui.ijupdater
 
ActivateUpdateSiteRun(FilesCollection, List<UpdateSite>) - Constructor for class org.hkijena.jipipe.ui.ijupdater.ActivateUpdateSiteRun
 
activeAreas - Variable in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
add(JIPipeDataTableMetadataRow) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
add(int, JIPipeDataTableMetadataRow) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
add(JIPipeProject, JIPipeDataSlot, JIPipeDataTableMetadata) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableMetadata
add(String, int) - Method in class org.hkijena.jipipe.api.nodes.database.WeightedTokens
Adds a text to tokenize
add(JIPipeParameterCollection, String, JIPipeParameterTree.Node) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Adds a new JIPipeParameterCollection into this collection.
add() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration
Adds a new runtime partition.
add(JIPipeRuntimePartition) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration
 
add(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
Adds the value to all components
add(Scene3DNode) - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
add(int, Scene3DNode) - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
add(Ribbon.Action) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Band
 
add(Ribbon.Band) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Task
 
add(Component) - Method in class org.hkijena.jipipe.ui.components.VerticalToolBar
 
add(JIPipeProject, Store<JIPipeDataTable>) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
add(Component) - Method in class org.hkijena.jipipe.utils.MenuManager
 
add(Point) - Method in class org.hkijena.jipipe.utils.PointRange
Adds the point's x and y coordinates to all points
add(List<Double>, List<Double>) - Static method in class org.hkijena.jipipe.utils.VectorUtils
 
addActionListener(ActionListener) - Method in class org.hkijena.jipipe.ui.components.FancyPasswordField
Adds a listener for when the search text changes
addActionListener(ActionListener) - Method in class org.hkijena.jipipe.ui.components.FancyTextField
Adds a listener for when the search text changes
addActionListener(ActionListener) - Method in class org.hkijena.jipipe.ui.components.PathEditor
Adds a listener for when the path property changes
addActionListener(Runnable) - Method in class org.hkijena.jipipe.ui.components.ribbon.CheckBoxAction
 
addActionListener(ActionListener) - Method in class org.hkijena.jipipe.ui.components.ribbon.CheckBoxAction
 
addActionListener(Runnable) - Method in class org.hkijena.jipipe.ui.components.ribbon.LargeButtonAction
 
addActionListener(ActionListener) - Method in class org.hkijena.jipipe.ui.components.ribbon.LargeButtonAction
 
addActionListener(Runnable) - Method in class org.hkijena.jipipe.ui.components.ribbon.LargeToggleButtonAction
 
addActionListener(ActionListener) - Method in class org.hkijena.jipipe.ui.components.ribbon.LargeToggleButtonAction
 
addActionListener(Runnable) - Method in class org.hkijena.jipipe.ui.components.ribbon.SmallButtonAction
 
addActionListener(ActionListener) - Method in class org.hkijena.jipipe.ui.components.ribbon.SmallButtonAction
 
addActionListener(Runnable) - Method in class org.hkijena.jipipe.ui.components.ribbon.SmallToggleButtonAction
 
addActionListener(ActionListener) - Method in class org.hkijena.jipipe.ui.components.ribbon.SmallToggleButtonAction
 
addActionListener(ActionListener) - Method in class org.hkijena.jipipe.ui.components.search.SearchTextField
Adds a listener for when the search text changes
addAdaptiveParameter(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
addAfterLastOfType(Component, Class<? extends Component>) - Method in class org.hkijena.jipipe.utils.MenuManager
 
addAlgorithm(JsonNodeInfo) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
Adds a new node type of specified type
AddAlgorithmSlotPanel - Class in org.hkijena.jipipe.ui.components
UI that adds slots to an algorithm
AddAlgorithmSlotPanel(JIPipeGraphNode, JIPipeSlotType, JIPipeHistoryJournal) - Constructor for class org.hkijena.jipipe.ui.components.AddAlgorithmSlotPanel
 
addAll(Collection<? extends JIPipeDataTableMetadataRow>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
addAll(int, Collection<? extends JIPipeDataTableMetadataRow>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
addAll(Collection<? extends Scene3DNode>) - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
addAll(int, Collection<? extends Scene3DNode>) - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
addAll(Ribbon.Action...) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Band
 
addAll(Ribbon.Band...) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Task
 
addAndModifyRow() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds a new row and returns a ResultsTableData.RowBuilder for setting values conveniently
addAnnotation(Annotation) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
 
addAnnotationColumn(String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.AnnotationTableData
Adds a new column that contains annotation data and returns its index- If the column already exists, its index is returned.
AddAnnotationColumnsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.annotations
Algorithm that integrates columns
AddAnnotationColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.annotations.AddAnnotationColumnsAlgorithm
Creates a new instance
AddAnnotationColumnsAlgorithm(AddAnnotationColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.annotations.AddAnnotationColumnsAlgorithm
Creates a copy
addAnnotationIfEnabled(Collection<JIPipeDataAnnotation>, JIPipeData) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalDataAnnotationNameParameter
Adds the annotation with given value of the parameter is enabled
addAnnotationIfEnabled(Collection<JIPipeTextAnnotation>, String) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter
Adds the annotation with given value of the parameter is enabled
addAnnotationIfEnabled(Collection<JIPipeTextAnnotation>, String[]) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter
Adds the annotation with given value of the parameter is enabled
addAnnotationIfEnabled(Collection<JIPipeTextAnnotation>, Collection<String>) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter
Adds the annotation with given value of the parameter is enabled
addAnnotationToAllData(JIPipeTextAnnotation, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Deprecated.
use addTextAnnotationToAllData()
addBalloonToComponent(AbstractButton, String) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
addBand(String) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Task
 
addBand(String, String) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Task
 
AddBookmarkNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
AddBookmarkNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddBookmarkNodeUIContextAction
 
addBorder(ImagePlus, int, int, int, int, BorderMode, double, Color, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm
 
AddBorder2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
 
AddBorder2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm
 
AddBorder2DAlgorithm(AddBorder2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm
 
addButton(String, Icon, Consumer<SearchTextField>) - Method in class org.hkijena.jipipe.ui.components.search.SearchTextField
 
addButton(String, ActionListener) - Method in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
addCategories(String...) - Method in class org.hkijena.jipipe.api.JIPipeMetadata
 
addCategory(String) - Method in class org.hkijena.jipipe.api.JIPipeMetadata
 
addChild(String, JIPipeParameterTree.Node) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
addChild(Scene3DNode) - Method in class org.hkijena.jipipe.extensions.scene3d.model.Scene3DGroupNode
 
addChoosableFileFilter(FileNameExtensionFilter) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
addColumn() - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
Adds a new column
addColumn(ParameterTable.ParameterColumn, Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
Adds a new column to the table
addColumn(String, boolean) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds a column with the given name.
addColumn(String, TableColumn, boolean) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds a column with the given name.
addColumn(Component) - Method in class org.hkijena.jipipe.ui.components.FormPanel.GroupHeaderPanel
Adds a component on the right hand side
addColumns(Collection<ResultsTableData>, boolean, TableColumnNormalization) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds columns from another table
addCompartment(String) - Method in class org.hkijena.jipipe.api.JIPipeProject
Adds a new project compartment
addCompartment(JIPipeProjectCompartment, UUID) - Method in class org.hkijena.jipipe.api.JIPipeProject
Adds an existing compartment instance
addContent(GraphNodeParameterReference) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup
Adds a new element into the group.
addContent(Collection<GraphNodeParameterReference>) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup
Adds multiple elements.
addCustomEntriesToTable(UIDefaults) - Method in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
Add this theme's custom entries to the defaults table.
addCustomEntriesToTable(UIDefaults) - Method in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
Add this theme's custom entries to the defaults table.
addData(JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, JIPipeDataContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Adds a data row
addData(JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Deprecated.
use the overload with the context
addData(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Deprecated.
use the overload with the context
addData(JIPipeData, JIPipeDataContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Adds a data row
addData(JIPipeDataTable, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Deprecated.
use addDataFromSlot
addData(JIPipeDataItemStore, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, JIPipeDataContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Adds data as virtual data reference
addData(JIPipeDataItemStore, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Deprecated.
use the overload with the context
addData(JIPipeDataItemStore, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeDataContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Adds data as virtual data reference
addData(JIPipeDataItemStore, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Deprecated.
use the overload with the context
addData(JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeDataContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Adds data as virtual data reference
addData(JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Deprecated.
use the overload with the context
addDataFromSlot(JIPipeDataTable, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Copies the source slot into this slot.
addDataFromTable(JIPipeDataTable, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Merges the data from the source table into the current one
addEdgeIgnoreLoops(FilamentVertex, FilamentVertex) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
addEdgeIgnoreLoops(FilamentVertex, FilamentVertex, FilamentEdge) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
addEmptySlot(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Ensures that the specified slot is registered to the data batch
addEntry(JIPipeValidationReportEntry) - Method in class org.hkijena.jipipe.ui.components.UserFriendlyErrorUI
Adds an entry to the UI
addEscapeListener(JDialog) - Static method in class org.hkijena.jipipe.utils.UIUtils
Makes a JDialog close when the escape key is hit
addFillerGridBagComponent(Container, int, int) - Static method in class org.hkijena.jipipe.utils.UIUtils
Equivalent of Box.verticalGlue() for GridBagLayout
addFirst(Component) - Method in class org.hkijena.jipipe.utils.MenuManager
 
addFromAnnotations(Class<? extends JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Adds slots from parameter annotations (with autoCreate)
addFromPopulation(Objects3DPopulation, int, int) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
Adds ROI from a population
addFromTable(JIPipeDataTable, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Deprecated.
use addDataFromTable instead
addFromTemplate(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionList
 
addGraph(JIPipeGraph, Set<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph
 
addGraph(JIPipeGraph, Set<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph
 
addGraph(JIPipeGraph) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunPartitionGraph
 
addGroupHeader(String, Icon) - Method in class org.hkijena.jipipe.ui.components.FormPanel
Adds a group header
addGroupHeader(String, String, Icon) - Method in class org.hkijena.jipipe.ui.components.FormPanel
Adds a group header
addGroups(Collection<GraphNodeParameterReferenceGroup>) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection
Adds multiple groups
addInheritanceConversion(JIPipeDataInfo, JIPipeDataInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder
Deprecated.
addInheritanceConversion(Class<? extends JIPipeData>, Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder
Deprecated.
addInputData(JIPipeDataSlot, int) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Adds the data row of a given slot.
addInputData(JIPipeDataSlot, Collection<Integer>) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Adds the data row of a given slot.
addInputSlot(String, String, Class<? extends JIPipeData>, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Adds a new input slot
addInputSlot(String, String, Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Adds an input slot
addInputSlot(String, String, Class<? extends JIPipeData>, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Adds an input slot
addInputSlot(AddJIPipeInputSlot) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Adds an input slot from an annotation
addInputSlot(String, String, Class<? extends JIPipeData>, boolean, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Adds an input slot
addInputSlotForModuleItem(ModuleItem<?>, Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
addItem(Object) - Method in class org.hkijena.jipipe.ui.ijupdater.IJProgressAdapter
 
addItem(Object) - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeProgressAdapter
 
addItem(Object) - Method in class org.hkijena.jipipe.ui.ijupdater.ProgressAdapter
 
AdditionFunctionOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
AdditionFunctionOperator(int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.AdditionFunctionOperator
 
AddJIPipeCitation - Annotation Type in org.hkijena.jipipe.api
Interface to add citations to nodes/data types
AddJIPipeCitations - Annotation Type in org.hkijena.jipipe.api
AddJIPipeDocumentationDescription - Annotation Type in org.hkijena.jipipe.api
Allows to separate the description part of a SetJIPipeDocumentation into multiple items.
AddJIPipeDocumentationDescriptions - Annotation Type in org.hkijena.jipipe.api
Container for multiple AddJIPipeDocumentationDescription
AddJIPipeInputSlot - Annotation Type in org.hkijena.jipipe.api.nodes
Annotates an JIPipeGraphNode with an input slot.
AddJIPipeInputSlots - Annotation Type in org.hkijena.jipipe.api.nodes
Required to allow multiple AddJIPipeInputSlot
AddJIPipeNodeAlias - Annotation Type in org.hkijena.jipipe.api.nodes
Annotates a node with an additional menu location
AddJIPipeNodeAliases - Annotation Type in org.hkijena.jipipe.api.nodes
 
AddJIPipeOutputSlot - Annotation Type in org.hkijena.jipipe.api.nodes
Annotates an JIPipeGraphNode with an output slot.
AddJIPipeOutputSlots - Annotation Type in org.hkijena.jipipe.api.nodes
Required to allow multiple AddJIPipeOutputSlot
addLink(String, Icon, File) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
addLinkCategory(String) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
addMaxProgress(int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
addMergedDataAnnotation(JIPipeDataAnnotation, JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Adds an annotation to the annotation list
addMergedDataAnnotation(JIPipeDataAnnotation, JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Adds an annotation to the annotation list
addMergedDataAnnotations(Collection<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Adds annotations to the annotation list
addMergedDataAnnotations(Collection<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Adds annotations to the annotation list
addMergedTextAnnotation(JIPipeTextAnnotation, JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Adds an annotation to the annotation list
addMergedTextAnnotation(JIPipeTextAnnotation, JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Adds an annotation to the annotation list
addMergedTextAnnotations(Map<String, String>, JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Adds annotations to the merged annotation storage of this interface.
addMergedTextAnnotations(List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Adds annotations to the merged annotation storage of this interface.
addMergedTextAnnotations(Collection<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Adds annotations to the merged annotation storage of this interface.
addMessage(MessagePanel.MessageType, String, boolean, boolean, Component...) - Method in class org.hkijena.jipipe.ui.components.MessagePanel
 
addMessage(MessagePanel.MessageType, String, boolean, boolean, List<Component>) - Method in class org.hkijena.jipipe.ui.components.MessagePanel
 
AddMissingRowsInSeriesAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.rows
 
AddMissingRowsInSeriesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm
 
AddMissingRowsInSeriesAlgorithm(AddMissingRowsInSeriesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm
 
AddMissingRowsInSeriesAlgorithm.CounterVariablesInfo - Class in org.hkijena.jipipe.extensions.tables.nodes.rows
 
AddMissingRowsInSeriesAlgorithm.DefaultValuesVariablesInfo - Class in org.hkijena.jipipe.extensions.tables.nodes.rows
 
addNameToColumnIdentifiers(DefaultTableModel, String) - Static method in class org.hkijena.jipipe.utils.TableUtils
Adds a name to columns
AddNewCompartmentUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
AddNewCompartmentUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddNewCompartmentUIContextAction
 
addNewGroup() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection
Adds a new empty group
addNewInstance() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeatureFilterParameter.List
 
addNewInstance() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeaturePenaltyParameter.List
 
addNewInstance() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeatureFilterParameter.List
 
addNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameter
Adds a new instance of the content class Override this method for types that cannot be default-constructed
addNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionList
 
addNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.colors.ColorListParameter
 
addNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.filesystem.PathList
 
addNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.list.DoubleList
 
addNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.list.FloatList
 
addNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.list.IntegerList
 
addNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.list.LongList
 
addNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.list.StringList
 
AddNewNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
AddNewNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddNewNodeUIContextAction
 
AddNoise2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise
Wrapper around ImageProcessor
AddNoise2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.AddNoise2DAlgorithm
Instantiates a new node type.
AddNoise2DAlgorithm(AddNoise2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.AddNoise2DAlgorithm
Instantiates a new node type.
addNumericColumn(String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds a string column with the given name.
addOutputData(String, JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(String, JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(String, JIPipeData, List<JIPipeTextAnnotation>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(String, JIPipeDataItemStore, List<JIPipeTextAnnotation>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(String, JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(String, JIPipeDataItemStore, JIPipeTextAnnotationMergeMode, List<JIPipeTextAnnotation>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(JIPipeOutputDataSlot, JIPipeDataItemStore, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
 
addOutputData(JIPipeOutputDataSlot, JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point
addOutputData(JIPipeOutputDataSlot, JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point
addOutputData(String, JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(JIPipeOutputDataSlot, JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point
addOutputData(JIPipeOutputDataSlot, JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point
addOutputData(JIPipeOutputDataSlot, JIPipeDataItemStore, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point
addOutputData(String, JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(String, JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(String, JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(JIPipeOutputDataSlot, JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point
addOutputData(JIPipeOutputDataSlot, JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point
addOutputData(JIPipeOutputDataSlot, JIPipeData, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point
addOutputData(JIPipeOutputDataSlot, JIPipeDataItemStore, List<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeMode, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point
addOutputSlot(String, String, Class<? extends JIPipeData>, String, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Deprecated.
Inherited slot is non-functional
addOutputSlot(String, String, Class<? extends JIPipeData>, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Adds a new output slot
addOutputSlot(String, String, Class<? extends JIPipeData>, String) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Deprecated.
Slot inheritance is non-functional
addOutputSlot(String, String, Class<? extends JIPipeData>, String, Map<Class<? extends JIPipeData>, Class<? extends JIPipeData>>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Deprecated.
Slot inheritance is non-functional
addOutputSlot(String, String, Class<? extends JIPipeData>, String, Map<Class<? extends JIPipeData>, Class<? extends JIPipeData>>, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Deprecated.
Slot inheritance is non-functional
addOutputSlot(String, String, Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Adds an output slot
addOutputSlot(AddJIPipeOutputSlot) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Adds an output slot from an annotation
addOutputSlot(String, String, Class<? extends JIPipeData>, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Adds an output slot
addOutputSlotForModuleItem(ModuleItem<?>, Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
addOverlay(JIPipeData) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
addOverlay(Object) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
addParameter(JIPipeMutableParameterAccess) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Adds a new parameter.
addParameter(String, Class<?>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Adds a new parameter
addParameter(String, Class<?>, String, String, Annotation...) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
 
AddParameterDialog - Class in org.hkijena.jipipe.ui.components
UI that adds slots to an algorithm
AddParameterDialog(JIPipeWorkbench, JIPipeDynamicParameterCollection) - Constructor for class org.hkijena.jipipe.ui.components.AddParameterDialog
 
AddParameterDialog.Settings - Class in org.hkijena.jipipe.ui.components
 
addParameterForModuleItem(String, String, String, Class<?>, ModuleItem<?>) - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNode
 
addPoint(int, int, float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines
Adds a single point to the hough transform.
addPoints(ImageProcessor, boolean, float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines
Adds points from an image.
addPopupMenuToButton(AbstractButton) - Static method in class org.hkijena.jipipe.utils.UIUtils
Adds a popup menu to a button.
addPopupMenuToButton(AbstractButton, JPopupMenu) - Static method in class org.hkijena.jipipe.utils.UIUtils
Adds an existing popup menu to a button
addPostprocessorCode(StringBuilder, List<JIPipeOutputDataSlot>) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
 
addPredecessor(JIPipeDataContext) - Method in class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext
 
addPreset(Class<?>, JIPipeEnvironment) - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry
Adds a new preset into the storage of the environment class
addProgress(int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
addRecentJsonExtension(Path) - Method in class org.hkijena.jipipe.extensions.settings.ProjectsSettings
Adds a JSON extension file to the list of recent JSON extensions
addRecentProject(Path) - Method in class org.hkijena.jipipe.extensions.settings.ProjectsSettings
Adds a project file to the list of recent projects
addReloadablePopupMenuToButton(AbstractButton, JPopupMenu, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils
Adds an existing popup menu to a button Adds a function that is run before the popup is shown
addReloadableRightClickPopupMenuToButton(AbstractButton, JPopupMenu, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils
Adds an existing popup menu to a button Adds a function that is run before the popup is shown
addRightClickPopupMenuToButton(AbstractButton) - Static method in class org.hkijena.jipipe.utils.UIUtils
Adds an existing popup menu to a button Adds a function that is run before the popup is shown
addRightClickPopupMenuToButton(AbstractButton, JPopupMenu) - Static method in class org.hkijena.jipipe.utils.UIUtils
Adds an existing popup menu to a button Adds a function that is run before the popup is shown
addRightClickPopupMenuToComponent(Component) - Static method in class org.hkijena.jipipe.utils.UIUtils
Adds an existing popup menu to a button Adds a function that is run before the popup is shown
AddROI3DToManagerOperation - Class in org.hkijena.jipipe.extensions.ij3d.display
 
AddROI3DToManagerOperation() - Constructor for class org.hkijena.jipipe.extensions.ij3d.display.AddROI3DToManagerOperation
 
AddRoiListsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge
Wrapper around RoiManager
AddRoiListsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge.AddRoiListsAlgorithm
Instantiates a new node type.
AddRoiListsAlgorithm(AddRoiListsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge.AddRoiListsAlgorithm
Instantiates a new node type.
AddROIToActiveJIPipeImageViewerDataDisplay - Class in org.hkijena.jipipe.extensions.imagejdatatypes.display
 
AddROIToActiveJIPipeImageViewerDataDisplay() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddROIToActiveJIPipeImageViewerDataDisplay
 
AddROIToJIPipeImageViewerDataDisplay - Class in org.hkijena.jipipe.extensions.imagejdatatypes.display
 
AddROIToJIPipeImageViewerDataDisplay() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddROIToJIPipeImageViewerDataDisplay
 
addRow() - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
Adds a new row
addRow(List<Object>) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
Adds a row with raw values.
addRow() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
Creates a new empty row
addRow(Map<String, Object>) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds a new row and writes the provided values into the table
addRow() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds a new row
addRowBuilder() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Deprecated.
Use addAndModifyRow() instead
addRows(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds multiple rows
addRows(ResultsTableData) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Merges another results table into this one
AddSaltAndPepperNoise2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise
Wrapper around ImageProcessor
AddSaltAndPepperNoise2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.AddSaltAndPepperNoise2DAlgorithm
Instantiates a new node type.
AddSaltAndPepperNoise2DAlgorithm(AddSaltAndPepperNoise2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.AddSaltAndPepperNoise2DAlgorithm
Instantiates a new node type.
addSelectionContextPanel(ROIManagerPlugin3DSelectionContextPanel) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
addSelectionContextPanel(FilamentsManagerPlugin2D.SelectionContextPanel) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D
 
addSelectionContextPanel(FilamentsManagerPlugin3D.SelectionContextPanel) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
addSelectionContextPanel(SpotsManagerPlugin2D.SelectionContextPanel) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D
 
addSelectionContextPanel(TracksManagerPlugin2D.SelectionContextPanel) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D
 
addSelectionContextPanel(ROIManagerPlugin2DSelectionContextPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
addSeparator() - Method in class org.hkijena.jipipe.ui.components.VerticalToolBar
 
addSeparatorIfNeeded(JPopupMenu) - Static method in class org.hkijena.jipipe.utils.UIUtils
Adds a separator if there is at least one component in the menu and the last item is not a separator
addSeparatorIfNeeded(JMenu) - Static method in class org.hkijena.jipipe.utils.UIUtils
Adds a separator if there is at least one component in the menu and the last item is not a separator
addSeries(PlotDataSeries) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
Adds a new series into this plot
addSeries() - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
Adds a new series
addSlide(Component, String) - Method in class org.hkijena.jipipe.utils.ui.DotSlideshow
 
addSlot(String, JIPipeDataSlotInfo, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Adds a slots
addSlot(AddJIPipeInputSlot, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Adds an input slot from an annotation
addSlot(AddJIPipeOutputSlot, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Adds an input slot from an annotation
addSlot(JIPipeDataSlotInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Adds a slot
addSlot(String, JIPipeDataSlotInfo, boolean) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
addSlot(JIPipeDataSlotInfo, boolean) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
addSlot(String, JIPipeDataSlotInfo, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeIOSlotConfiguration
 
addStop(float, Color) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.LUTData
 
addStringColumn(String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds a string column with the given name.
addTab(String, Icon, Component, DocumentTabPane.CloseMode, boolean) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Adds a new tab
addTab(String, Icon, Component, DocumentTabPane.CloseMode) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Adds a new tab
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableMetadata
 
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
 
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
 
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantTableModel
 
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableModel
 
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableModel
 
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerTableModel
 
addTask(String) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon
Adds a new task.
addTask(String, String) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon
Adds a new task.
AddTemplateContextMenuAction - Class in org.hkijena.jipipe.extensions.nodetemplate
 
AddTemplateContextMenuAction() - Constructor for class org.hkijena.jipipe.extensions.nodetemplate.AddTemplateContextMenuAction
 
addText(String) - Method in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
addText(String, SimpleAttributeSet) - Method in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
addTextAnnotationToAllData(JIPipeTextAnnotation, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Adds an annotation to all existing data
addTo(JIPipeProject, String) - Method in class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment
Adds the compartment to a project as the specified compartment name
addToForm(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.OrthoSliderPanel
 
addToForm(T, Component) - Method in class org.hkijena.jipipe.ui.components.FormPanel
Adds a component to the form
addToForm(T, Component, MarkdownDocument) - Method in class org.hkijena.jipipe.ui.components.FormPanel
Adds a component to the form
addToggleButton(JToggleButton, ImageViewerPanelCanvas2D) - Method in interface org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2DTool
Adds events to JToggleButton that acts as control for the tool
addToGraph(JIPipeGraphCanvasUI) - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
addToGraph(JIPipeGraphCanvasUI) - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
addToGraph(JIPipeGraphCanvasUI) - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
addToGraph(JIPipeGraphCanvasUI) - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
addToGraph(JIPipeGraphCanvasUI) - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry
 
addToken(char[], int, int, int, int, boolean) - Method in class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
Adds the token specified to the current linked list of tokens.
addToOpenPanels() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
addToRoiManager(RoiManager) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Adds the ROI to an existing ROI manager instance
AddToROIManagerDataDisplay - Class in org.hkijena.jipipe.extensions.imagejdatatypes.display
 
AddToROIManagerDataDisplay() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddToROIManagerDataDisplay
 
addToSelection(JIPipeGraphNodeUI) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Adds an algorithm to the selection
addToSelection(JIPipeGraphNodeUI) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
Adds an algorithm to the selection
addToTable(ResultsTable) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds the table to an existing table
addUpdateSite(UpdateSite) - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeImageJPluginManager
 
addUser(Object) - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore
Marks the provided object as user of this data
addVerticalGlue() - Method in class org.hkijena.jipipe.ui.components.FormPanel
Adds a component that acts as Box.verticalGlue()
addVerticalGlue(Component, MarkdownDocument) - Method in class org.hkijena.jipipe.ui.components.FormPanel
Adds a vertical glue component
addWideToForm(T) - Method in class org.hkijena.jipipe.ui.components.FormPanel
Adds a component.
addWideToForm(T, MarkdownDocument) - Method in class org.hkijena.jipipe.ui.components.FormPanel
Adds a component.
adjustmentValueChanged(AdjustmentEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorMinimap
 
AdvancedFileChooser - Class in org.hkijena.jipipe.ui.components
 
AdvancedFileChooser() - Constructor for class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
AdvancedFileChooser(File) - Constructor for class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
AdvancedFileChooser.FileChooserComponent - Class in org.hkijena.jipipe.ui.components
 
AdvancedFileChooser.FileChooserComponentUI - Class in org.hkijena.jipipe.ui.components
 
afterSetRow() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.algorithms.CachedTrackmateAlgorithmViewerWindow
 
afterSetRow() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.trackscheme.TrackSchemeCachedDataViewerWindow
 
afterSetRow() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerCacheDataViewerWindow
 
afterSetRow() - Method in class org.hkijena.jipipe.extensions.multiparameters.datatypes.CachedParametersDataViewerWindow
 
afterSetRow() - Method in class org.hkijena.jipipe.extensions.plots.CachedPlotViewerWindow
 
afterSetRow() - Method in class org.hkijena.jipipe.extensions.strings.CachedTextViewerWindow
 
afterSetRow() - Method in class org.hkijena.jipipe.extensions.tables.display.CachedTableViewerWindow
 
afterSetRow() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
Called after the data row was changed
AlgorithmFinderSettings() - Constructor for class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings.AlgorithmFinderSettings
 
AlgorithmGraphCopyNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard
 
AlgorithmGraphCopyNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphCopyNodeUIContextAction
 
AlgorithmGraphCutNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard
 
AlgorithmGraphCutNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphCutNodeUIContextAction
 
AlgorithmGraphDuplicateNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard
 
AlgorithmGraphDuplicateNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphDuplicateNodeUIContextAction
 
AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard
 
AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction
 
AlgorithmGraphPasteNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard
 
AlgorithmGraphPasteNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphPasteNodeUIContextAction
 
ALL_DESCRIPTIONS - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.ImageStatisticsSetParameter
 
AllMeasurementExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util.measure
A variable source that contains the ImageJ measurements.
AllMeasurementExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.AllMeasurementExpressionParameterVariablesInfo
 
ALLOWED_PARAMETER_CLASSES - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.MacroWrapperAlgorithm
 
ALLOWED_PARAMETER_CLASSES - Static variable in class org.hkijena.jipipe.extensions.python.PythonUtils
 
ALLOWED_PARAMETER_CLASSES - Static variable in class org.hkijena.jipipe.extensions.r.RUtils
 
ALLOWED_PARAMETER_TYPES - Static variable in class org.hkijena.jipipe.extensions.clij2.CLIJPlugin
 
ALLOWED_VALUES - Static variable in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.EdgeFeature
 
ALLOWED_VALUES - Static variable in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeature
 
ALLOWED_VALUES - Static variable in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeature
 
allowsDragConnections() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
allowsDragConnections() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
allowsDragConnections() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
allowsDragConnections() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
allowsDragConnections() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeToggleableGraphEditorTool
 
allowsDragConnections() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
allowsDragNodes() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
allowsDragNodes() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
allowsDragNodes() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
allowsDragNodes() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
allowsDragNodes() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeToggleableGraphEditorTool
 
allowsDragNodes() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
allowsInputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
allowsInputSlots() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
allowsOutputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
allowsOutputSlots() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
AllROI3DMeasurementExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.ij3d.utils
A variable source that contains the ImageJ measurements.
AllROI3DMeasurementExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.AllROI3DMeasurementExpressionParameterVariablesInfo
 
AllROI3DRelationMeasurementExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.ij3d.utils
A variable source that contains the ImageJ measurements.
AllROI3DRelationMeasurementExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.AllROI3DRelationMeasurementExpressionParameterVariablesInfo
 
AlwaysOnTopToggle - Class in org.hkijena.jipipe.ui.components.window
 
AlwaysOnTopToggle(JWindow) - Constructor for class org.hkijena.jipipe.ui.components.window.AlwaysOnTopToggle
 
AlwaysOnTopToggle(JFrame) - Constructor for class org.hkijena.jipipe.ui.components.window.AlwaysOnTopToggle
 
AlwaysOnTopToggle(JDialog) - Constructor for class org.hkijena.jipipe.ui.components.window.AlwaysOnTopToggle
 
AnalyzeSkeleton2D3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze
 
AnalyzeSkeleton2D3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm
 
AnalyzeSkeleton2D3DAlgorithm(AnalyzeSkeleton2D3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm
 
AnalyzeSkeleton2D3DAlgorithm.CycleRemovalMethod - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze
 
AnalyzeSkeleton2D3DAlgorithm.EndRemovalMethod - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze
 
AnalyzeSkeleton2D3DAlgorithm.OutputParameters - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze
 
Anchor - Enum in org.hkijena.jipipe.extensions.parameters.library.roi
An anchor
AnchorParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.roi
Editor for Margin
AnchorParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.AnchorParameterEditorUI
 
AnchorParameterSettings - Annotation Type in org.hkijena.jipipe.extensions.parameters.library.roi
Allows to modify the behavior of the Anchor parameter editor UI
AnimatedIcon - Class in org.hkijena.jipipe.ui.components.icons
 
AnimatedIcon(Component, ImageIcon, ImageIcon, int, double) - Constructor for class org.hkijena.jipipe.ui.components.icons.AnimatedIcon
 
ANIMATION_DELAY - Static variable in class org.hkijena.jipipe.ui.components.icons.NewThrobberIcon
 
AnimationSpeedPlugin2D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d
 
AnimationSpeedPlugin2D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.AnimationSpeedPlugin2D
 
AnimationSpeedPlugin3D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins3d
 
AnimationSpeedPlugin3D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins3d.AnimationSpeedPlugin3D
 
AnnotateByExpression - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Algorithm that annotates all data with the same annotation
AnnotateByExpression(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByExpression
 
AnnotateByExpression(AnnotateByExpression) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByExpression
Copies the algorithm
AnnotateByExpression.VariablesInfo - Class in org.hkijena.jipipe.extensions.annotation.algorithms
 
AnnotateByImageStatisticsExpressionAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze
Wrapper around RoiManager
AnnotateByImageStatisticsExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnnotateByImageStatisticsExpressionAlgorithm
Instantiates a new node type.
AnnotateByImageStatisticsExpressionAlgorithm(AnnotateByImageStatisticsExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnnotateByImageStatisticsExpressionAlgorithm
Instantiates a new node type.
AnnotateByProjectPaths - Class in org.hkijena.jipipe.extensions.annotation.algorithms
 
AnnotateByProjectPaths(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByProjectPaths
 
AnnotateByProjectPaths(AnnotateByProjectPaths) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByProjectPaths
 
AnnotateByProjectPaths.Entry - Class in org.hkijena.jipipe.extensions.annotation.algorithms
 
AnnotateByTablePropertiesAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.annotations
 
AnnotateByTablePropertiesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm
 
AnnotateByTablePropertiesAlgorithm(AnnotateByTablePropertiesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm
 
AnnotateDataWithTableValues - Class in org.hkijena.jipipe.extensions.tables.nodes.annotations
 
AnnotateDataWithTableValues(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateDataWithTableValues
 
AnnotateDataWithTableValues(AnnotateDataWithTableValues) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateDataWithTableValues
 
AnnotateDataWithTableValues.AnnotationSettings - Class in org.hkijena.jipipe.extensions.tables.nodes.annotations
 
AnnotateOMERODatasetReferenceAlgorithm - Class in org.hkijena.jipipe.extensions.omero.nodes.annotate
 
AnnotateOMERODatasetReferenceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm
 
AnnotateOMERODatasetReferenceAlgorithm(AnnotateOMERODatasetReferenceAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm
 
AnnotateOMEROImageReferenceAlgorithm - Class in org.hkijena.jipipe.extensions.omero.nodes.annotate
 
AnnotateOMEROImageReferenceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm
 
AnnotateOMEROImageReferenceAlgorithm(AnnotateOMEROImageReferenceAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm
 
AnnotateOMEROProjectReferenceAlgorithm - Class in org.hkijena.jipipe.extensions.omero.nodes.annotate
 
AnnotateOMEROProjectReferenceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm
 
AnnotateOMEROProjectReferenceAlgorithm(AnnotateOMEROProjectReferenceAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm
 
AnnotateOMEWithMetadataAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome
 
AnnotateOMEWithMetadataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm
 
AnnotateOMEWithMetadataAlgorithm(AnnotateOMEWithMetadataAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm
 
AnnotateOMEWithMetadataAlgorithm.Entry - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome
 
AnnotateWithAnnotationTable - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Algorithm that merges the annotations of all inputs and outputs the data with the shared annotations
AnnotateWithAnnotationTable(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithAnnotationTable
Creates a new instance
AnnotateWithAnnotationTable(AnnotateWithAnnotationTable) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithAnnotationTable
Creates a copy
AnnotateWithData - Class in org.hkijena.jipipe.extensions.annotation.algorithms
 
AnnotateWithData(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithData
 
AnnotateWithData(AnnotateWithData) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithData
 
AnnotateWithDataString - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Generates annotations from filenames
AnnotateWithDataString(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithDataString
New instance
AnnotateWithDataString(AnnotateWithDataString) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithDataString
Copies the algorithm
AnnotateWithDataTableProperties - Class in org.hkijena.jipipe.extensions.utils.algorithms.datatable
 
AnnotateWithDataTableProperties(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.datatable.AnnotateWithDataTableProperties
 
AnnotateWithDataTableProperties(AnnotateWithDataTableProperties) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.datatable.AnnotateWithDataTableProperties
 
AnnotateWithJsonDataAlgorithm - Class in org.hkijena.jipipe.extensions.strings.nodes.json
 
AnnotateWithJsonDataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.json.AnnotateWithJsonDataAlgorithm
 
AnnotateWithJsonDataAlgorithm(AnnotateWithJsonDataAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.json.AnnotateWithJsonDataAlgorithm
 
AnnotateWithJsonDataAlgorithm.Entry - Class in org.hkijena.jipipe.extensions.strings.nodes.json
 
AnnotateWithOverlapMeasureLabelsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
AnnotateWithOverlapMeasureLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm
 
AnnotateWithOverlapMeasureLabelsAlgorithm(AnnotateWithOverlapMeasureLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm
 
AnnotateWithPathProperties - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
 
AnnotateWithPathProperties(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotateWithPathProperties
 
AnnotateWithPathProperties(AnnotateWithPathProperties) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotateWithPathProperties
 
AnnotateWithSourceSlot - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Generates annotations from filenames
AnnotateWithSourceSlot(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithSourceSlot
New instance
AnnotateWithSourceSlot(AnnotateWithSourceSlot) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithSourceSlot
Copies the algorithm
AnnotateWithTextDataAlgorithm - Class in org.hkijena.jipipe.extensions.strings.nodes.text
 
AnnotateWithTextDataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.text.AnnotateWithTextDataAlgorithm
 
AnnotateWithTextDataAlgorithm(AnnotateWithTextDataAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.text.AnnotateWithTextDataAlgorithm
 
AnnotateWithTextDataAlgorithm.Entry - Class in org.hkijena.jipipe.extensions.strings.nodes.text
 
AnnotateWithXPathDataAlgorithm - Class in org.hkijena.jipipe.extensions.strings.nodes.xml
 
AnnotateWithXPathDataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.xml.AnnotateWithXPathDataAlgorithm
 
AnnotateWithXPathDataAlgorithm(AnnotateWithXPathDataAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.xml.AnnotateWithXPathDataAlgorithm
 
AnnotateWithXPathDataAlgorithm.Entry - Class in org.hkijena.jipipe.extensions.strings.nodes.xml
 
AnnotationFilterExpression - Class in org.hkijena.jipipe.extensions.annotation.algorithms
 
AnnotationFilterExpression() - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotationFilterExpression
 
AnnotationFilterExpression(String) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotationFilterExpression
 
AnnotationFilterExpression(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotationFilterExpression
 
AnnotationGeneratorExpression - Class in org.hkijena.jipipe.extensions.expressions
An expression that is used to generate annotations for data
AnnotationGeneratorExpression() - Constructor for class org.hkijena.jipipe.extensions.expressions.AnnotationGeneratorExpression
 
AnnotationGeneratorExpression(String) - Constructor for class org.hkijena.jipipe.extensions.expressions.AnnotationGeneratorExpression
 
AnnotationGeneratorExpression(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.extensions.expressions.AnnotationGeneratorExpression
 
AnnotationGeneratorExpressionVariablesInfo - Class in org.hkijena.jipipe.extensions.expressions
 
AnnotationGeneratorExpressionVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.expressions.AnnotationGeneratorExpressionVariablesInfo
 
AnnotationInfoPlugin2D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d
To be used with CachedImagePlusDataViewerWindow and other similar implementations that have access to the cache
AnnotationInfoPlugin2D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.AnnotationInfoPlugin2D
 
AnnotationInfoPlugin3D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins3d
To be used with CachedImagePlusDataViewerWindow and other similar implementations that have access to the cache
AnnotationInfoPlugin3D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins3d.AnnotationInfoPlugin3D
 
annotationListToMap(Collection<JIPipeTextAnnotation>, JIPipeTextAnnotationMergeMode) - Static method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
Converts a set of annotations to a map
annotationListToPython(Collection<JIPipeTextAnnotation>) - Static method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
Converts a list of annotations into a Python dictionary
annotationMapToPython(Map<String, JIPipeTextAnnotation>) - Static method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
Converts a map of annotations into a Python dictionary
AnnotationQueryExpression - Class in org.hkijena.jipipe.extensions.expressions
An expression that is used to query annotations
AnnotationQueryExpression() - Constructor for class org.hkijena.jipipe.extensions.expressions.AnnotationQueryExpression
 
AnnotationQueryExpression(String) - Constructor for class org.hkijena.jipipe.extensions.expressions.AnnotationQueryExpression
 
AnnotationQueryExpression(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.extensions.expressions.AnnotationQueryExpression
 
AnnotationQueryExpressionVariablesInfo - Class in org.hkijena.jipipe.extensions.expressions
 
AnnotationQueryExpressionVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.expressions.AnnotationQueryExpressionVariablesInfo
 
ANNOTATIONS_VARIABLE - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionParameterVariableInfo
 
AnnotationSettings() - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateDataWithTableValues.AnnotationSettings
 
AnnotationsNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories
 
AnnotationsNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
AnnotationsPlugin - Class in org.hkijena.jipipe.extensions.annotation
Extension that provides data types and algorithms to modify data annotations
AnnotationsPlugin() - Constructor for class org.hkijena.jipipe.extensions.annotation.AnnotationsPlugin
 
AnnotationsToOMEROKeyValuePairExporter - Class in org.hkijena.jipipe.extensions.omero.parameters
 
AnnotationsToOMEROKeyValuePairExporter() - Constructor for class org.hkijena.jipipe.extensions.omero.parameters.AnnotationsToOMEROKeyValuePairExporter
 
AnnotationsToOMEROKeyValuePairExporter(AnnotationsToOMEROKeyValuePairExporter) - Constructor for class org.hkijena.jipipe.extensions.omero.parameters.AnnotationsToOMEROKeyValuePairExporter
 
AnnotationsToOMEROTagExporter - Class in org.hkijena.jipipe.extensions.omero.parameters
 
AnnotationsToOMEROTagExporter() - Constructor for class org.hkijena.jipipe.extensions.omero.parameters.AnnotationsToOMEROTagExporter
 
AnnotationsToOMEROTagExporter(AnnotationsToOMEROTagExporter) - Constructor for class org.hkijena.jipipe.extensions.omero.parameters.AnnotationsToOMEROTagExporter
 
AnnotationsToParametersAlgorithm - Class in org.hkijena.jipipe.extensions.multiparameters.nodes
 
AnnotationsToParametersAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.AnnotationsToParametersAlgorithm
 
AnnotationsToParametersAlgorithm(AnnotationsToParametersAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.AnnotationsToParametersAlgorithm
 
annotationsToPython(StringBuilder, Collection<JIPipeTextAnnotation>) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
Converts annotations into Python code.
AnnotationTableData - Class in org.hkijena.jipipe.extensions.tables.datatypes
A special kind of ResultsTableData that stores annotation columns.
AnnotationTableData() - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.AnnotationTableData
 
AnnotationTableData(Map<String, TableColumn>) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.AnnotationTableData
 
AnnotationTableData(Collection<TableColumn>) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.AnnotationTableData
 
AnnotationTableData(ResultsTable) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.AnnotationTableData
 
AnnotationTableData(ResultsTableData) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.AnnotationTableData
 
AnnotationTableFromFile - Class in org.hkijena.jipipe.extensions.annotation.datasources
Imports AnnotationTableData from a file
AnnotationTableFromFile(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.datasources.AnnotationTableFromFile
 
AnnotationTableFromFile(AnnotationTableFromFile) - Constructor for class org.hkijena.jipipe.extensions.annotation.datasources.AnnotationTableFromFile
Copies the algorithm
AnnotationTableToPaths - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Filters input files
AnnotationTableToPaths(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotationTableToPaths
Instantiates the algorithm
AnnotationTableToPaths(AnnotationTableToPaths) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotationTableToPaths
Copies the algorithm
AnnotationToPath - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Filters input files
AnnotationToPath(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotationToPath
Instantiates the algorithm
AnnotationToPath(AnnotationToPath) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotationToPath
Copies the algorithm
annotationType() - Method in class org.hkijena.jipipe.api.JIPipeDocumentation
 
annotationType() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeInputSlot
 
annotationType() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeOutputSlot
 
AnyClassFilter - Class in org.hkijena.jipipe.utils.classfilters
 
AnyClassFilter() - Constructor for class org.hkijena.jipipe.utils.classfilters.AnyClassFilter
 
APIErrorValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts
 
APIErrorValidationReportContext() - Constructor for class org.hkijena.jipipe.api.validation.contexts.APIErrorValidationReportContext
 
APIErrorValidationReportContext(JIPipeValidationReportContext) - Constructor for class org.hkijena.jipipe.api.validation.contexts.APIErrorValidationReportContext
 
AppendRectangularRoiAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate
Deprecated.
AppendRectangularRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.AppendRectangularRoiAlgorithm
Deprecated.
Instantiates a new node type.
AppendRectangularRoiAlgorithm(AppendRectangularRoiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.AppendRectangularRoiAlgorithm
Deprecated.
Instantiates a new node type.
apply(JIPipeDataTable, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compat.ImageJDataExportOperation
 
apply(List<Object>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compat.ImageJDataImportOperation
 
apply(double, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.NumericFunctionExpression
 
apply(Object) - Method in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderUI.EntryToStringFunction
 
apply(JIPipeExpressionVariablesMap, ImagePlus, ImageSliceIndex) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Image5DSliceIndexExpressionParameterVariablesInfo
 
apply(double) - Method in enum org.hkijena.jipipe.extensions.parameters.library.colors.ColorMap
Generates a color according to the color map
apply(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtraction
 
apply(Collection<Boolean>) - Method in enum org.hkijena.jipipe.extensions.parameters.library.util.LogicalOperation
Apply the logical operation for the items
apply(TableColumn) - Method in interface org.hkijena.jipipe.extensions.tables.ColumnOperation
Applies the operation
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.AbsoluteColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.ArcusCosineColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.ArcusSineColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.ArcusTangentColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.CeilingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.ClampNegativeColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.ClampPositiveColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.CosineColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.DegreeToRadiansColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.ExpColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.FactorizeColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.FloorColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.HyperbolicCosineColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.HyperbolicSineColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.HyperbolicTangentColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.LnColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.Log10ColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.OccurrencesColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.RadiansToDegreeColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.RemoveNaNColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.RoundColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.SignColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.SineColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.SortAscendingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.SortDescendingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.SqrtColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.SquareColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.TangentColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.ToNumericColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.ToStringColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.GetFirstIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.GetLastIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.MergeToJsonIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsAverageIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsCountIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsCountNonZeroIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsCumulativeSumColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsGeometricMeanIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsKurtosisIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsMaxIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsMedianIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsMinIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsModeIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsSkewnessIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsStandardDeviationIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsVarianceIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsWeightedSumColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.SumIntegratingColumnOperation
 
apply(Integer) - Method in class org.hkijena.jipipe.utils.AutoResizeSplitPane.DynamicSidebarRatio
 
apply(Integer) - Method in class org.hkijena.jipipe.utils.AutoResizeSplitPane.FixedRatio
 
ApplyColorMathExpression2DExpression - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
 
ApplyColorMathExpression2DExpression(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyColorMathExpression2DExpression
 
ApplyColorMathExpression2DExpression(ApplyColorMathExpression2DExpression) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyColorMathExpression2DExpression
 
applyCustomCalibration() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl
 
applyCustomCalibration() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl
 
ApplyDisplayContrastAlgorithm - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms
 
ApplyDisplayContrastAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ApplyDisplayContrastAlgorithm
 
ApplyDisplayContrastAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ApplyDisplayContrastAlgorithm
 
ApplyDistanceTransform2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap
Wrapper around EDM
ApplyDistanceTransform2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ApplyDistanceTransform2DAlgorithm
Instantiates a new node type.
ApplyDistanceTransform2DAlgorithm(ApplyDistanceTransform2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ApplyDistanceTransform2DAlgorithm
Instantiates a new node type.
ApplyExpressionPerLabelAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.transform
 
ApplyExpressionPerLabelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm
 
ApplyExpressionPerLabelAlgorithm(ApplyExpressionPerLabelAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm
 
ApplyExpressionPerRowAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.rows
Deprecated.
ApplyExpressionPerRowAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm
Deprecated.
 
ApplyExpressionPerRowAlgorithm(ApplyExpressionPerRowAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm
Deprecated.
 
ApplyExpressionPerRowAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.tables.nodes.rows
Deprecated.
 
ApplyExpressionPerRowAlgorithm2 - Class in org.hkijena.jipipe.extensions.tables.nodes.rows
 
ApplyExpressionPerRowAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2
 
ApplyExpressionPerRowAlgorithm2(ApplyExpressionPerRowAlgorithm2) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2
 
ApplyExpressionPerRowAlgorithm2.Entry - Class in org.hkijena.jipipe.extensions.tables.nodes.rows
 
ApplyExpressionPerRowAlgorithm2.VariablesInfo - Class in org.hkijena.jipipe.extensions.tables.nodes.rows
 
ApplyExpressionToColumnsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.columns
Algorithm that integrates columns
ApplyExpressionToColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.ApplyExpressionToColumnsAlgorithm
Creates a new instance
ApplyExpressionToColumnsAlgorithm(ApplyExpressionToColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.ApplyExpressionToColumnsAlgorithm
Creates a copy
applyLUT(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.LUTInverterAlgorithm
 
applyLUT() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerLUTEditor
 
applyLUT() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerOpacityLUTEditor
 
applyLUT() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DLUTEditor
 
applyLUT() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DLUTEditor
 
applyLUT() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DOpacityLUTEditor
 
ApplyLUTAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut
 
ApplyLUTAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.ApplyLUTAlgorithm
 
ApplyLUTAlgorithm(ApplyLUTAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.ApplyLUTAlgorithm
 
ApplyMath2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
Wrapper around ImageProcessor
ApplyMath2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyMath2DAlgorithm
Instantiates a new node type.
ApplyMath2DAlgorithm(ApplyMath2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyMath2DAlgorithm
Instantiates a new node type.
ApplyMath2DAlgorithm.Transformation - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
Available transformation functions
ApplyMathExpression2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
Wrapper around ImageProcessor
ApplyMathExpression2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyMathExpression2DAlgorithm
Instantiates a new node type.
ApplyMathExpression2DAlgorithm(ApplyMathExpression2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyMathExpression2DAlgorithm
Instantiates a new node type.
ApplyMultiOrthoSlicerRun(List<Content>, int, List<Integer>, List<Integer>, List<Integer>, boolean) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.ApplyMultiOrthoSlicerRun
 
applyOperation(List<ResultsTableData.Index>, ConvertingColumnOperation) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Applies an operation to the selected cells
ApplyOrthoSlicerRun(List<Content>, int, int, int, int, boolean, boolean, boolean) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.ApplyOrthoSlicerRun
 
applyRatio() - Method in class org.hkijena.jipipe.utils.AutoResizeSplitPane
 
ApplyRun - Class in org.hkijena.jipipe.ui.ijupdater
 
ApplyRun(FilesCollection) - Constructor for class org.hkijena.jipipe.ui.ijupdater.ApplyRun
 
applyTemplateToItems() - Method in class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionList
Applies the entries of the current template to all items (adding/removing/changing items)
applyThemeToCodeEditor(RSyntaxTextArea) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
applyTo(Roi, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.ROIProperties
 
applyToRoi(Roi) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
applyToRoiReference(Roi, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.ROIProperties
Note that this is without cloning the ROI
ApplyTransform2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
Wrapper around ImageProcessor
ApplyTransform2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyTransform2DAlgorithm
Instantiates a new node type.
ApplyTransform2DAlgorithm(ApplyTransform2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyTransform2DAlgorithm
Instantiates a new node type.
ApplyTransform2DAlgorithm.Transformation - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
Available transformation functions
ApplyVectorMathExpression2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
Wrapper around ImageProcessor
ApplyVectorMathExpression2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm
Instantiates a new node type.
ApplyVectorMathExpression2DAlgorithm(ApplyVectorMathExpression2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm
Instantiates a new node type.
archive(JIPipeWriteDataStorage, JIPipeWriteDataStorage) - Method in class org.hkijena.jipipe.ui.ArchiveProjectRun
 
ArchiveProjectRun - Class in org.hkijena.jipipe.ui
 
ArchiveProjectRun(JIPipeProject) - Constructor for class org.hkijena.jipipe.ui.ArchiveProjectRun
 
ArchiveProjectToDirectoryRun - Class in org.hkijena.jipipe.ui
 
ArchiveProjectToDirectoryRun(JIPipeProject, Path) - Constructor for class org.hkijena.jipipe.ui.ArchiveProjectToDirectoryRun
 
ArchiveProjectToZIPRun - Class in org.hkijena.jipipe.ui
 
ArchiveProjectToZIPRun(JIPipeProject, Path) - Constructor for class org.hkijena.jipipe.ui.ArchiveProjectToZIPRun
 
archiveTo(JIPipeWriteDataStorage, JIPipeWriteDataStorage, JIPipeProgressInfo, Path) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Called when the node is being archived into the specified storage.
archiveTo(JIPipeWriteDataStorage, JIPipeWriteDataStorage, JIPipeProgressInfo, Path) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileDataSource
 
archiveTo(JIPipeWriteDataStorage, JIPipeWriteDataStorage, JIPipeProgressInfo, Path) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileListDataSource
 
archiveTo(JIPipeWriteDataStorage, JIPipeWriteDataStorage, JIPipeProgressInfo, Path) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderDataSource
 
archiveTo(JIPipeWriteDataStorage, JIPipeWriteDataStorage, JIPipeProgressInfo, Path) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderListDataSource
 
archiveTo(JIPipeWriteDataStorage, JIPipeWriteDataStorage, JIPipeProgressInfo, Path) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathDataSource
 
archiveTo(JIPipeWriteDataStorage, JIPipeWriteDataStorage, JIPipeProgressInfo, Path) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathListDataSource
 
ArchiveUtils - Class in org.hkijena.jipipe.utils
 
ArchiveUtils() - Constructor for class org.hkijena.jipipe.utils.ArchiveUtils
 
ArcusCosineColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a sine function
ArcusCosineColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.ArcusCosineColumnOperation
 
ArcusSineColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a sine function
ArcusSineColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.ArcusSineColumnOperation
 
ArcusTangentColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a sine function
ArcusTangentColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.ArcusTangentColumnOperation
 
argbToMultiChannel(ImgPlus<ARGBType>) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.ImgUtils
Treat alpha, red, green, and blue values in ARGBType image as a separate, last channel dimension.
ArrangeChannelsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color
Wrapper around ChannelArranger
ArrangeChannelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm
Instantiates a new node type.
ArrangeChannelsAlgorithm(ArrangeChannelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm
Creates a copy
ArrayUtils - Class in org.hkijena.jipipe.utils
 
ArrayUtils() - Constructor for class org.hkijena.jipipe.utils.ArrayUtils
 
ArrowAnnotationGraphNode - Class in org.hkijena.jipipe.extensions.graphannotation.nodes
 
ArrowAnnotationGraphNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.graphannotation.nodes.ArrowAnnotationGraphNode
 
ArrowAnnotationGraphNode(ArrowAnnotationGraphNode) - Constructor for class org.hkijena.jipipe.extensions.graphannotation.nodes.ArrowAnnotationGraphNode
 
ArrowAnnotationGraphNodeTool - Class in org.hkijena.jipipe.extensions.graphannotation.tools
 
ArrowAnnotationGraphNodeTool() - Constructor for class org.hkijena.jipipe.extensions.graphannotation.tools.ArrowAnnotationGraphNodeTool
 
ArrowLessScrollBarUI - Class in org.hkijena.jipipe.ui.theme
 
ArrowLessScrollBarUI() - Constructor for class org.hkijena.jipipe.ui.theme.ArrowLessScrollBarUI
 
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.annotation.AnnotationsPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.cellpose.CellposePlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.clij2.CLIJPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.core.CorePlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.filesystem.FilesystemPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.forms.FormsPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.ij3d.IJ3DPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.ijtrackmate.TrackMatePlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.ijweka.WekaPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.ilastik.IlastikPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.imagej2.ImageJ2Plugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.ImageJAlgorithmsPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.imp.ImpPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.multiparameters.MultiParameterAlgorithmsPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.omero.OMEROPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.omnipose.OmniposePlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.plots.PlotsPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.python.PythonPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.r.RPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.scene3d.Scene3DPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.strings.StringsPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.tables.TablesPlugin
Dependency instance to be used for creating the set of dependencies
AS_DEPENDENCY - Static variable in class org.hkijena.jipipe.extensions.utils.UtilitiesPlugin
Dependency instance to be used for creating the set of dependencies
askOpenInCurrentWindow(Component, String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Asks the user how to open a project: In the current window or a new window
AssembleExtractedROIAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble
 
AssembleExtractedROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm
 
AssembleExtractedROIAlgorithm(AssembleExtractedROIAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm
 
assert2DImage(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
assert3DImage(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
assert4DImage(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
assert5DImage(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
assertImageDimensions(ImagePlus, int) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
assignData(String, TableColumn) - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesBuilder
Assigns data to a column
attach(Class<?>, Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Attaches an object as the specified type Warning: Attachments are not serialized
attach(Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Attaches the object with its class as key.
attachAdditionalMetadata(String, Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Attaches additional metadata (persistent)
attachKeyValuePairs(Map<String, String>, DataObject, SecurityContext) - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROGateway
 
attachTags(Set<String>, DataObject, SecurityContext) - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROGateway
 
AUTO_THRESHOLDER - Static variable in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdFunction
 
autoCreateSlots() - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
Automatically creates slots that connect all inputs
autoExpandLeftTop() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
autoLayout() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Applies a full auto-layout method
autoLayoutAll() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Auto-layouts all UIs
autoPlaceCloseToCursor(JIPipeGraphNodeUI, boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
autoPlaceCloseToLocation(JIPipeGraphNodeUI, Point) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Moves the node close to a real location
AutoResizeSplitPane - Class in org.hkijena.jipipe.utils
A split pane that automatically resizes itself to a ratio
AutoResizeSplitPane(int, double) - Constructor for class org.hkijena.jipipe.utils.AutoResizeSplitPane
 
AutoResizeSplitPane(int, Component, Component, double) - Constructor for class org.hkijena.jipipe.utils.AutoResizeSplitPane
 
AutoResizeSplitPane(int, AutoResizeSplitPane.Ratio) - Constructor for class org.hkijena.jipipe.utils.AutoResizeSplitPane
 
AutoResizeSplitPane(int, Component, Component, AutoResizeSplitPane.Ratio) - Constructor for class org.hkijena.jipipe.utils.AutoResizeSplitPane
 
AutoResizeSplitPane.DynamicSidebarRatio - Class in org.hkijena.jipipe.utils
A dynamic ratio designed for UIs with a sidebar (defaults to the right) that adapts to the available space Targets a preferred sidebar width
AutoResizeSplitPane.FixedRatio - Class in org.hkijena.jipipe.utils
A fixed ratio
AutoResizeSplitPane.Ratio - Interface in org.hkijena.jipipe.utils
Interface that takes the component width as input and returns the ratio
autoSizeColumns() - Method in class org.hkijena.jipipe.ui.tableeditor.TableEditor
Auto-sizes all columns
AutoThreshold2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
Thresholding node that thresholds via an auto threshold
AutoThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm
 
AutoThreshold2DAlgorithm(AutoThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm
Copies the algorithm
AutoThreshold2DAlgorithm.SliceThresholdMode - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
 
AVAILABLE_FONTS - Static variable in class org.hkijena.jipipe.extensions.parameters.library.primitives.FontFamilyParameter
 
AverageKeyValueThresholdStatisticsGenerator - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics
 
AverageKeyValueThresholdStatisticsGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator
 
AverageKeyValueThresholdStatisticsGenerator(AverageKeyValueThresholdStatisticsGenerator) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator
 
AVICompression - Enum in org.hkijena.jipipe.extensions.imagejdatatypes.util
Wrapper around AVI_Writer compression
axes - Variable in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetDescription
Dimension axes.
axesGuessed - Variable in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetDescription
axesOf(ImgPlus<?>) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.ImgUtils
Extract axes from ImgPlus.
axisTags - Variable in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetEntryProvider.DatasetEntry
 

B

b0 - Variable in class org.hkijena.jipipe.ui.grapheditor.general.connections.RectangularLine
 
b1 - Variable in class org.hkijena.jipipe.ui.grapheditor.general.connections.RectangularLine
 
backup(JIPipeProjectWindow) - Method in class org.hkijena.jipipe.extensions.settings.BackupSettings
 
backupAll() - Method in class org.hkijena.jipipe.extensions.settings.BackupSettings
 
BackupManagerPanel - Class in org.hkijena.jipipe.ui.backups
 
BackupManagerPanel(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.ui.backups.BackupManagerPanel
 
BackupManagerTreeCellRenderer - Class in org.hkijena.jipipe.ui.backups
Renders the tree in JIPipeResultAlgorithmTree
BackupManagerTreeCellRenderer() - Constructor for class org.hkijena.jipipe.ui.backups.BackupManagerTreeCellRenderer
Creates new renderer
BackupSettings - Class in org.hkijena.jipipe.extensions.settings
 
BackupSettings() - Constructor for class org.hkijena.jipipe.extensions.settings.BackupSettings
 
Band(String, Ribbon.Action...) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Band
 
Band(String, List<Ribbon.Action>) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Band
 
Band(String, String, Ribbon.Action...) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Band
 
Band(String, String, List<Ribbon.Action>) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Band
 
BarBoxAndWhiskerCategoryPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
A box and whisker plot Series table columns: Value (Double), Category (String), Group (String) Multiple series: Yes
BarBoxAndWhiskerCategoryPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.BarBoxAndWhiskerCategoryPlotData
Creates a new instance
BarBoxAndWhiskerCategoryPlotData(BarBoxAndWhiskerCategoryPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.BarBoxAndWhiskerCategoryPlotData
Creates a copy
BarCategoryPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
A bar category plot Series table columns: Value (Double), Category (String), Group (String) Multiple series: No
BarCategoryPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.BarCategoryPlotData
Creates a new instance
BarCategoryPlotData(BarCategoryPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.BarCategoryPlotData
Creates a copy
BarStatisticalCategoryPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
A statistical bar category plot Series table columns: Value (Double), Category (String), Group (String) Multiple series: No
BarStatisticalCategoryPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.BarStatisticalCategoryPlotData
Creates a new instance
BarStatisticalCategoryPlotData(BarStatisticalCategoryPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.BarStatisticalCategoryPlotData
Creates a copy
base64ToImage(String) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils
 
base64ToObject(String) - Static method in class org.hkijena.jipipe.utils.SerializationUtils
Deserializes a Java object from its binary representation (as base64 string)
BaseDirectoryChangedEvent(Object, Path) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.BaseDirectoryChangedEvent
 
BaseDirectoryChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.BaseDirectoryChangedEventEmitter
 
BasicMinicondaEnvPythonInstaller - Class in org.hkijena.jipipe.extensions.python.installers
 
BasicMinicondaEnvPythonInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
 
BasicMinicondaEnvPythonInstaller.Configuration - Class in org.hkijena.jipipe.extensions.python.installers
 
BasicPortableEnvPythonInstaller - Class in org.hkijena.jipipe.extensions.python.installers
 
BasicPortableEnvPythonInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller
 
BasicPortableEnvPythonInstaller.Configuration - Class in org.hkijena.jipipe.extensions.python.installers
 
BatchAssistantPlugin - Class in org.hkijena.jipipe.extensions.batchassistant
 
BatchAssistantPlugin() - Constructor for class org.hkijena.jipipe.extensions.batchassistant.BatchAssistantPlugin
 
BatchIndexCellRenderer() - Constructor for class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantDataTableUI.BatchIndexCellRenderer
 
BeforeAddParameterEvent(JIPipeDynamicParameterCollection, JIPipeMutableParameterAccess) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.BeforeAddParameterEvent
 
BeforeAddParameterEventEmitter() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.BeforeAddParameterEventEmitter
 
beforeDraw(int, int, int) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin2D
Called before draw is called
beforeDraw(int, int, int) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.CalibrationPlugin2D
 
beforeDraw(int, int, int) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.LUTManagerPlugin2D
 
beforeSetRow() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.algorithms.CachedTrackmateAlgorithmViewerWindow
 
beforeSetRow() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.trackscheme.TrackSchemeCachedDataViewerWindow
 
beforeSetRow() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerCacheDataViewerWindow
 
beforeSetRow() - Method in class org.hkijena.jipipe.extensions.multiparameters.datatypes.CachedParametersDataViewerWindow
 
beforeSetRow() - Method in class org.hkijena.jipipe.extensions.plots.CachedPlotViewerWindow
 
beforeSetRow() - Method in class org.hkijena.jipipe.extensions.strings.CachedTextViewerWindow
 
beforeSetRow() - Method in class org.hkijena.jipipe.extensions.tables.display.CachedTableViewerWindow
 
beforeSetRow() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
Called before the data row is changed
beginModificationBlock() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Halts all JIPipeParameterCollection.ParameterStructureChangedEvent until endModificationBlock() is called.
Bernsen(ImageProcessor, int, double, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm
 
BernsenLocalAutoThreshold2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local
Segmenter node that thresholds via an auto threshold Based on code from Auto_Local_Threshold
BernsenLocalAutoThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm
 
BernsenLocalAutoThreshold2DAlgorithm(BernsenLocalAutoThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm
Copies the algorithm
BinarizeAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary
 
BinarizeAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.BinarizeAlgorithm
Instantiates a new node type.
BinarizeAlgorithm(BinarizeAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.BinarizeAlgorithm
Instantiates a new node type.
binaryFileToObject(Path) - Static method in class org.hkijena.jipipe.utils.SerializationUtils
Deserializes a Java object from a binary file via ObjectInputStream
BioFormatsConfigTool - Class in org.hkijena.jipipe.extensions.imagejdatatypes.tools
 
BioFormatsConfigTool(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.tools.BioFormatsConfigTool
Creates a new instance
BioFormatsExporter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms
Deprecated.
BioFormatsExporter(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.BioFormatsExporter
Deprecated.
 
BioFormatsExporter(BioFormatsExporter) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.BioFormatsExporter
Deprecated.
 
BioFormatsExporter2 - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms
 
BioFormatsExporter2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.BioFormatsExporter2
 
BioFormatsExporter2(BioFormatsExporter2) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.BioFormatsExporter2
 
BioFormatsImporter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources
BioFormats importer wrapper
BioFormatsImporter(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
BioFormatsImporter(BioFormatsImporter) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
Copies the algorithm
BitDepth - Enum in org.hkijena.jipipe.extensions.imagejdatatypes.util
Enum of ImageJ bit depths
BitDepthEnumItemInfo - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
 
BitDepthEnumItemInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.BitDepthEnumItemInfo
 
bitDepthToImagePlusDataType(int) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Returns the general ImagePlusData class for a bit depth
BitwiseLogicalOperationAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary
 
BitwiseLogicalOperationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.BitwiseLogicalOperationAlgorithm
 
BitwiseLogicalOperationAlgorithm(BitwiseLogicalOperationAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.BitwiseLogicalOperationAlgorithm
 
BLACK_TRANSPARENT - Static variable in class org.hkijena.jipipe.utils.ColorUtils
 
BlackToWhiteTrackBackground - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
BlackToWhiteTrackBackground() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.BlackToWhiteTrackBackground
 
blend(ColorProcessor, ColorProcessor, double) - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageBlendMode
Blends the top image onto the bottom image
blend(int, int, double) - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageBlendMode
Applies blending on a single RGB pixel
BlendImagesAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color
 
BlendImagesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.BlendImagesAlgorithm
 
BlendImagesAlgorithm(BlendImagesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.BlendImagesAlgorithm
 
Block(long[], int[]) - Constructor for class org.hkijena.jipipe.extensions.ilastik.utils.GridCoordinates.Block
 
blockSize(long[]) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.Hdf5Utils
 
bold - Variable in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
BOOKMARK_SHADOW_BORDER - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
BookmarkedNodeListCellRenderer - Class in org.hkijena.jipipe.ui.bookmarks
Renderer for JIPipeGraphNode
BookmarkedNodeListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.bookmarks.BookmarkedNodeListCellRenderer
Creates a new renderer
BookmarkListPanel - Class in org.hkijena.jipipe.ui.bookmarks
 
BookmarkListPanel(JIPipeWorkbench, JIPipeGraph, JIPipeGraphEditorUI, Set<JIPipeGraphNode>) - Constructor for class org.hkijena.jipipe.ui.bookmarks.BookmarkListPanel
 
BooleanComboBoxItemRenderer(String, String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanParameterEditorUI.BooleanComboBoxItemRenderer
 
BooleanFalseConstant - Class in org.hkijena.jipipe.extensions.expressions.constants
 
BooleanFalseConstant() - Constructor for class org.hkijena.jipipe.extensions.expressions.constants.BooleanFalseConstant
 
BooleanFormData - Class in org.hkijena.jipipe.extensions.forms.datatypes
 
BooleanFormData() - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.BooleanFormData
 
BooleanFormData(BooleanFormData) - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.BooleanFormData
 
BooleanFormGeneratorAlgorithm - Class in org.hkijena.jipipe.extensions.forms.algorithms.generators
 
BooleanFormGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.generators.BooleanFormGeneratorAlgorithm
 
BooleanFormGeneratorAlgorithm(BooleanFormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.generators.BooleanFormGeneratorAlgorithm
 
BooleanParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Parameter editor for boolean data
BooleanParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanParameterEditorUI
 
BooleanParameterEditorUI.BooleanComboBoxItemRenderer - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
 
BooleanParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives
 
BooleanParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.BooleanParameterImageJ2ModuleInput
 
BooleanParameterImageJ2ModuleOutput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives
 
BooleanParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.BooleanParameterImageJ2ModuleOutput
 
BooleanParameterSettings - Annotation Type in org.hkijena.jipipe.extensions.parameters.library.primitives
 
BooleanParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Info for Boolean
BooleanParameterTypeInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanParameterTypeInfo
 
BooleanPrimitiveParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Info for Boolean
BooleanPrimitiveParameterTypeInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanPrimitiveParameterTypeInfo
 
BooleanTrueConstant - Class in org.hkijena.jipipe.extensions.expressions.constants
 
BooleanTrueConstant() - Constructor for class org.hkijena.jipipe.extensions.expressions.constants.BooleanTrueConstant
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsNodeTypeCategory
 
BorderImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds
 
BorderImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.BorderImageJ2OutOfBoundsFactoryData
 
BorderImageJ2OutOfBoundsFactoryData(OutOfBoundsPeriodicFactory<?, ?>) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.BorderImageJ2OutOfBoundsFactoryData
 
BorderImageJ2OutOfBoundsFactoryData(BorderImageJ2OutOfBoundsFactoryData) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.BorderImageJ2OutOfBoundsFactoryData
 
BorderMode - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
 
BoxAndWhiskerCategoryPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
Contains data for box and whisker category plots category plots.
BoxAndWhiskerCategoryPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.BoxAndWhiskerCategoryPlotData
Creates a new instance
BoxAndWhiskerCategoryPlotData(BoxAndWhiskerCategoryPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.BoxAndWhiskerCategoryPlotData
Creates a copy
BoxFilter2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur
Wrapper around ImageProcessor
BoxFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.BoxFilter2DAlgorithm
Instantiates a new node type.
BoxFilter2DAlgorithm(BoxFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.BoxFilter2DAlgorithm
Instantiates a new node type.
BoxFilter3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur
Wrapper around GaussianBlur
BoxFilter3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm
Instantiates a new node type.
BoxFilter3DAlgorithm(BoxFilter3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm
Instantiates a new node type.
boxHorizontal(Component...) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
boxVertical(Component...) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
branch(String) - Method in interface org.hkijena.jipipe.api.data.context.JIPipeDataContext
Returns a new context that contains the current one as predecessor
branch(JIPipeGraphNode) - Method in interface org.hkijena.jipipe.api.data.context.JIPipeDataContext
Returns a new context that contains the current one as predecessor
BRANCHES_TABLE_OUTPUT_SLOT - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm
 
BrightSpotsSegmentation2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
Applies Bright spots segmentation
BrightSpotsSegmentation2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm
 
BrightSpotsSegmentation2DAlgorithm(BrightSpotsSegmentation2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm
Copies the algorithm
BufferedImageUtils - Class in org.hkijena.jipipe.utils
 
BufferedImageUtils() - Constructor for class org.hkijena.jipipe.utils.BufferedImageUtils
 
build() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder
 
build() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
 
build(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
build() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
Returns the finished object Requires following properties to be set: source, field class, getter, setter
build() - Method in class org.hkijena.jipipe.extensions.imp.utils.ImpImageDataBuilder
 
build() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.RowBuilder
Does nothing
builder() - Static method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer
 
Builder() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder
 
builder() - Static method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
builder() - Static method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
Creates a new builder
Builder() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
 
buildFor(Path, JIPipeExpressionVariablesMap) - Static method in class org.hkijena.jipipe.extensions.expressions.variables.PathFilterExpressionParameterVariablesInfo
 
buildSeries() - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesBuilder
Generates a series
buildTokens(List<String>) - Static method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase
Converts a list of texts into word tokens
buildVariablesSet(ImagePlus, JIPipeExpressionVariablesMap) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.ImageQueryExpressionVariablesInfo
Builds the proper variable set for an image
BusyCursor - Class in org.hkijena.jipipe.utils.ui
A cursor for a component to indicate that some process is running
BusyCursor(Component) - Constructor for class org.hkijena.jipipe.utils.ui.BusyCursor
 
ByteArrayParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays
 
ByteArrayParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.ByteArrayParameterImageJ2ModuleInput
 
ByteConstantValueImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant
 
ByteConstantValueImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.ByteConstantValueImageJ2OutOfBoundsFactoryData
 
ByteConstantValueImageJ2OutOfBoundsFactoryData(OutOfBoundsConstantValueFactory<?, ?>) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.ByteConstantValueImageJ2OutOfBoundsFactoryData
 
ByteConstantValueImageJ2OutOfBoundsFactoryData(ByteConstantValueImageJ2OutOfBoundsFactoryData) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.ByteConstantValueImageJ2OutOfBoundsFactoryData
 
ByteParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives
 
ByteParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.ByteParameterImageJ2ModuleInput
 
ByteParameterImageJ2ModuleOutput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives
 
ByteParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.ByteParameterImageJ2ModuleOutput
 
ByteParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Info for Byte
ByteParameterTypeInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.ByteParameterTypeInfo
 
BytePrimitiveParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Info for Byte
BytePrimitiveParameterTypeInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.BytePrimitiveParameterTypeInfo
 

C

CacheAwareOpenResultsTableInJIPipeDataOperation - Class in org.hkijena.jipipe.extensions.tables.display
 
CacheAwareOpenResultsTableInJIPipeDataOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.display.CacheAwareOpenResultsTableInJIPipeDataOperation
 
CachedFilamentsDataViewerWindow - Class in org.hkijena.jipipe.extensions.ijfilaments.display
 
CachedFilamentsDataViewerWindow(JIPipeWorkbench, JIPipeDataTableDataSource, String) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.display.CachedFilamentsDataViewerWindow
 
CachedImagePlusDataViewerWindow - Class in org.hkijena.jipipe.extensions.imagejdatatypes.display
 
CachedImagePlusDataViewerWindow(JIPipeWorkbench, JIPipeDataTableDataSource, String) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedImagePlusDataViewerWindow
 
CachedImagePlusDataViewerWindow.CustomDataLoader - Class in org.hkijena.jipipe.extensions.imagejdatatypes.display
Used to override the data loading behavior
CachedOutputDataSlotListCellRenderer - Class in org.hkijena.jipipe.ui.cache.renderers
Renders a JIPipeDataSlot
CachedOutputDataSlotListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.cache.renderers.CachedOutputDataSlotListCellRenderer
Creates a new renderer
CachedParametersDataViewerWindow - Class in org.hkijena.jipipe.extensions.multiparameters.datatypes
 
CachedParametersDataViewerWindow(JIPipeWorkbench, JIPipeDataTableDataSource, String) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.datatypes.CachedParametersDataViewerWindow
 
CachedPlotViewerWindow - Class in org.hkijena.jipipe.extensions.plots
 
CachedPlotViewerWindow(JIPipeWorkbench, JIPipeDataTableDataSource, String, boolean) - Constructor for class org.hkijena.jipipe.extensions.plots.CachedPlotViewerWindow
 
CachedROIList3DDataViewerWindow - Class in org.hkijena.jipipe.extensions.ij3d.display
 
CachedROIList3DDataViewerWindow(JIPipeWorkbench, JIPipeDataTableDataSource, String) - Constructor for class org.hkijena.jipipe.extensions.ij3d.display.CachedROIList3DDataViewerWindow
 
CachedROIListDataViewerWindow - Class in org.hkijena.jipipe.extensions.imagejdatatypes.display
 
CachedROIListDataViewerWindow(JIPipeWorkbench, JIPipeDataTableDataSource, String) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedROIListDataViewerWindow
 
CachedSpotCollectionDataViewerWindow - Class in org.hkijena.jipipe.extensions.ijtrackmate.display.spots
 
CachedSpotCollectionDataViewerWindow(JIPipeWorkbench, JIPipeDataTableDataSource, String) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.CachedSpotCollectionDataViewerWindow
 
CachedTableViewerWindow - Class in org.hkijena.jipipe.extensions.tables.display
 
CachedTableViewerWindow(JIPipeWorkbench, JIPipeDataTableDataSource, String, boolean) - Constructor for class org.hkijena.jipipe.extensions.tables.display.CachedTableViewerWindow
 
CachedTextViewerWindow - Class in org.hkijena.jipipe.extensions.strings
Cached viewer for
CachedTextViewerWindow(JIPipeWorkbench, JIPipeDataTableDataSource, String, boolean) - Constructor for class org.hkijena.jipipe.extensions.strings.CachedTextViewerWindow
 
CachedTrackmateAlgorithmViewerWindow - Class in org.hkijena.jipipe.extensions.ijtrackmate.display.algorithms
Cached viewer for
CachedTrackmateAlgorithmViewerWindow(JIPipeWorkbench, JIPipeDataTableDataSource, String, boolean) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.display.algorithms.CachedTrackmateAlgorithmViewerWindow
 
CachedTracksCollectionDataViewerWindow - Class in org.hkijena.jipipe.extensions.ijtrackmate.display.tracks
 
CachedTracksCollectionDataViewerWindow(JIPipeWorkbench, JIPipeDataTableDataSource, String) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.CachedTracksCollectionDataViewerWindow
 
calculateCalibration(ImageProcessor, ImageJCalibrationMode, double, double, ImageStatistics) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
calculateCalibration() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.CalibrationPlugin3D
 
calculateMaxTabHeight(int) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
calculateMinimumBoundingRectangle(Roi) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Method based on fitMinRectangle
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdFunction
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdHuang
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdImageJDefault
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdImageJIsoData
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdIntermodes
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdIsoData
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdLi
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdMaxEntropy
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdMean
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdMinError
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdMinimum
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdMoments
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdOtsu
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdPercentile
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdRenyi
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdShanbhag
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdTriangle
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdYen
 
calibrate(ImageProcessor, ImageJCalibrationMode, double, double, ImageStatistics) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
calibrate(ImagePlus, ImageJCalibrationMode, double, double) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Calibrates the image (all processors).
calibrateAxis(ValueAxis, OptionalDoubleParameter, OptionalDoubleParameter) - Static method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
Calibrates the axes of a plot, setting min and max values
CalibrationParameters - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
 
CalibrationParameters() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.CalibrationParameters
 
CalibrationParameters(CalibrationParameters) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.CalibrationParameters
 
CalibrationPlugin2D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d
 
CalibrationPlugin2D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.CalibrationPlugin2D
 
CalibrationPlugin3D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins3d
 
CalibrationPlugin3D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins3d.CalibrationPlugin3D
 
call(JIPipeCache.ClearedEventListener, JIPipeCache.ClearedEvent) - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.ClearedEventEmitter
 
call(JIPipeCache.ModifiedEventListener, JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.ModifiedEventEmitter
 
call(JIPipeCache.StoredEventListener, JIPipeCache.StoredEvent) - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.StoredEventEmitter
 
call(JIPipeSlotConfiguration.SlotConfigurationChangedEventListener, JIPipeSlotConfiguration.SlotConfigurationChangedEvent) - Method in class org.hkijena.jipipe.api.data.JIPipeSlotConfiguration.SlotConfigurationChangedEventEmitter
 
call(JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEventListener, JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEvent) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEventEmitter
 
call(Listener, Event) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter
 
call(JIPipeEventEmitter<Event, Listener>, Event) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter.LambdaSubscriber
 
call(JIPipeEventEmitter<Event, Listener>, Event) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter.StrongObjectSubscriber
 
call(JIPipeEventEmitter<Event, Listener>, Event) - Method in interface org.hkijena.jipipe.api.events.JIPipeEventEmitter.Subscriber
 
call(JIPipeEventEmitter<Event, Listener>, Event) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter.WeakObjectSubscriber
 
call(ParameterReferencesChangedEventListener, ParameterReferencesChangedEvent) - Method in class org.hkijena.jipipe.api.grouping.events.ParameterReferencesChangedEventEmitter
 
call(JIPipeHistoryJournal.HistoryChangedEventListener, JIPipeHistoryJournal.HistoryChangedEvent) - Method in class org.hkijena.jipipe.api.history.JIPipeHistoryJournal.HistoryChangedEventEmitter
 
call(JIPipeProgressInfo.StatusUpdatedEventListener, JIPipeProgressInfo.StatusUpdatedEvent) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo.StatusUpdatedEventEmitter
 
call(JIPipeProject.CompartmentAddedEventListener, JIPipeProject.CompartmentAddedEvent) - Method in class org.hkijena.jipipe.api.JIPipeProject.CompartmentAddedEventEmitter
 
call(JIPipeProject.CompartmentRemovedEventListener, JIPipeProject.CompartmentRemovedEvent) - Method in class org.hkijena.jipipe.api.JIPipeProject.CompartmentRemovedEventEmitter
 
call(JIPipeRunnable.EnqeuedEventListener, JIPipeRunnable.EnqueuedEvent) - Method in class org.hkijena.jipipe.api.JIPipeRunnable.EnqueuedEventEmitter
 
call(JIPipeRunnable.FinishedEventListener, JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.api.JIPipeRunnable.FinishedEventEmitter
 
call(JIPipeRunnable.InterruptedEventListener, JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.api.JIPipeRunnable.InterruptedEventEmitter
 
call(JIPipeRunnable.ProgressEventListener, JIPipeRunnable.ProgressEvent) - Method in class org.hkijena.jipipe.api.JIPipeRunnable.ProgressEventEmitter
 
call(JIPipeRunnable.StartedEventListener, JIPipeRunnable.StartedEvent) - Method in class org.hkijena.jipipe.api.JIPipeRunnable.StartedEventEmitter
 
call(JIPipeGraph.GraphChangedEventListener, JIPipeGraph.GraphChangedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.GraphChangedEventEmitter
 
call(JIPipeGraph.NodeAddedEventListener, JIPipeGraph.NodeAddedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeAddedEventEmitter
 
call(JIPipeGraph.NodeConnectedEventListener, JIPipeGraph.NodeConnectedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeConnectedEventEmitter
 
call(JIPipeGraph.NodeDisconnectedEventListener, JIPipeGraph.NodeDisconnectedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeDisconnectedEventEmitter
 
call(JIPipeGraph.NodeRemovedEventListener, JIPipeGraph.NodeRemovedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeRemovedEventEmitter
 
call(JIPipeGraphNode.BaseDirectoryChangedEventListener, JIPipeGraphNode.BaseDirectoryChangedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.BaseDirectoryChangedEventEmitter
 
call(JIPipeGraphNode.NodeSlotsChangedEventListener, JIPipeGraphNode.NodeSlotsChangedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.NodeSlotsChangedEventEmitter
 
call(JIPipeNotificationInbox.DismissedEventListener, JIPipeNotificationInbox.DismissedEvent) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.DismissedEventEmitter
 
call(JIPipeNotificationInbox.PushedEventListener, JIPipeNotificationInbox.PushedEvent) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.PushedEventEmitter
 
call(JIPipeNotificationInbox.UpdatedEventListener, JIPipeNotificationInbox.UpdatedEvent) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.UpdatedEventEmitter
 
call(JIPipeDynamicParameterCollection.BeforeAddParameterEventListener, JIPipeDynamicParameterCollection.BeforeAddParameterEvent) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.BeforeAddParameterEventEmitter
 
call(JIPipeParameterCollection.ParameterChangedEventListener, JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterChangedEventEmitter
 
call(JIPipeParameterCollection.ParameterStructureChangedEventListener, JIPipeParameterCollection.ParameterStructureChangedEvent) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterStructureChangedEventEmitter
 
call(JIPipeParameterCollection.ParameterUIChangedEventListener, JIPipeParameterCollection.ParameterUIChangedEvent) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterUIChangedEventEmitter
 
call(JIPipeExtensionRegistry.ScheduledActivateExtensionEventListener, JIPipeExtensionRegistry.ScheduledActivateExtensionEvent) - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry.ScheduledActivateExtensionEventEmitter
 
call(JIPipeExtensionRegistry.ScheduledDeactivateExtensionEventListener, JIPipeExtensionRegistry.ScheduledDeactivateExtensionEvent) - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry.ScheduledDeactivateExtensionEventEmitter
 
call(JIPipeProjectTemplateRegistry.TemplatesUpdatedEventListener, JIPipeProjectTemplateRegistry.TemplatesUpdatedEvent) - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry.TemplatesUpdatedEventEmitter
 
call(JIPipeGraphRunGCGraph.GCEventListener, JIPipeGraphRunGCGraph.GCEvent) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph.GCEventEmitter
 
call(MaskDrawerPlugin2D.MaskChangedEventListener, MaskDrawerPlugin2D.MaskChangedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D.MaskChangedEventEmitter
 
call(ImageViewerPanelCanvas2D.PixelHoverEventListener, ImageViewerPanelCanvas2D.PixelHoverEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.PixelHoverEventEmitter
 
call(ImageViewerPanelCanvas2D.ToolChangedEventListener, ImageViewerPanelCanvas2D.ToolChangedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.ToolChangedEventEmitter
 
call(NodeTemplatesRefreshedEventListener, NodeTemplatesRefreshedEvent) - Method in class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplatesRefreshedEventEmitter
 
call(ParameterTable.ModelChangedEventListener, ParameterTable.ModelChangedEvent) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ModelChangedEventEmitter
 
call(JIPipeService.DatatypeRegisteredEventListener, JIPipeService.DatatypeRegisteredEvent) - Method in class org.hkijena.jipipe.JIPipeService.DatatypeRegisteredEventEmitter
 
call(JIPipeService.ExtensionContentAddedEventListener, JIPipeService.ExtensionContentAddedEvent) - Method in class org.hkijena.jipipe.JIPipeService.ExtensionContentAddedEventEmitter
 
call(JIPipeService.ExtensionContentRemovedEventListener, JIPipeService.ExtensionContentRemovedEvent) - Method in class org.hkijena.jipipe.JIPipeService.ExtensionContentRemovedEventEmitter
 
call(JIPipeService.ExtensionDiscoveredEventListener, JIPipeService.ExtensionDiscoveredEvent) - Method in class org.hkijena.jipipe.JIPipeService.ExtensionDiscoveredEventEmitter
 
call(JIPipeService.ExtensionRegisteredEventListener, JIPipeService.ExtensionRegisteredEvent) - Method in class org.hkijena.jipipe.JIPipeService.ExtensionRegisteredEventEmitter
 
call(JIPipeService.NodeInfoRegisteredEventListener, JIPipeService.NodeInfoRegisteredEvent) - Method in class org.hkijena.jipipe.JIPipeService.NodeInfoRegisteredEventEmitter
 
call(JIPipeAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEventListener, JIPipeAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEvent) - Method in class org.hkijena.jipipe.ui.cache.JIPipeAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEventEmitter
 
call(ColorChooserButton.ColorChosenEventListener, ColorChooserButton.ColorChosenEvent) - Method in class org.hkijena.jipipe.ui.components.ColorChooserButton.ColorChosenEventEmitter
 
call(FormPanel.HoverHelpEventListener, FormPanel.HoverHelpEvent) - Method in class org.hkijena.jipipe.ui.components.FormPanel.HoverHelpEventEmitter
 
call(JIPipeDataTypePicker.DataTypeDeselectedEventListener, JIPipeDataTypePicker.DataTypeDeselectedEvent) - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.DataTypeDeselectedEventEmitter
 
call(JIPipeDataTypePicker.DataTypeSelectedEventListener, JIPipeDataTypePicker.DataTypeSelectedEvent) - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.DataTypeSelectedEventEmitter
 
call(JIPipeDataTypePicker.SelectedDataTypesChangedEventListener, JIPipeDataTypePicker.SelectedDataTypesChangedEvent) - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.SelectedDataTypesChangedEventEmitter
 
call(JIPipeNodeInfoPicker.NodeInfoDeselectedEventListener, JIPipeNodeInfoPicker.NodeInfoDeselectedEvent) - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.NodeInfoDeselectedEventEmitter
 
call(JIPipeNodeInfoPicker.NodeInfoSelectedEventListener, JIPipeNodeInfoPicker.NodeInfoSelectedEvent) - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.NodeInfoSelectedEventEmitter
 
call(JIPipeNodeInfoPicker.SelectedInfosChangedEventListener, JIPipeNodeInfoPicker.SelectedInfosChangedEvent) - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.SelectedInfosChangedEventEmitter
 
call(DocumentTabPane.TabRenamedEventListener, DocumentTabPane.TabRenamedEvent) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.TabRenamedEventEmitter
 
call(ZoomViewPort.ZoomChangedEventListener, ZoomViewPort.ZoomChangedEvent) - Method in class org.hkijena.jipipe.ui.components.ZoomViewPort.ZoomChangedEventEmitter
 
call(RecentProjectsListPanel.ProjectOpenedEventListener, RecentProjectsListPanel.ProjectOpenedEvent) - Method in class org.hkijena.jipipe.ui.documentation.RecentProjectsListPanel.ProjectOpenedEventEmitter
 
call(WindowClosedEventListener, WindowClosedEvent) - Method in class org.hkijena.jipipe.ui.events.WindowClosedEventEmitter
 
call(WindowOpenedEventListener, WindowOpenedEvent) - Method in class org.hkijena.jipipe.ui.events.WindowOpenedEventEmitter
 
call(JIPipeModernPluginManager.UpdateSitesFailedEventListener, JIPipeModernPluginManager.UpdateSitesFailedEvent) - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager.UpdateSitesFailedEventEmitter
 
call(JIPipeModernPluginManager.UpdateSitesReadyEventListener, JIPipeModernPluginManager.UpdateSitesReadyEvent) - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager.UpdateSitesReadyEventEmitter
 
call(JIPipeGraphCanvasUI.GraphCanvasUpdatedEventListener, JIPipeGraphCanvasUI.GraphCanvasUpdatedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.GraphCanvasUpdatedEventEmitter
 
call(JIPipeGraphCanvasUI.NodeSelectionChangedEventListener, JIPipeGraphCanvasUI.NodeSelectionChangedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.NodeSelectionChangedEventEmitter
 
call(JIPipeGraphCanvasUI.NodeUISelectedEventListener, JIPipeGraphCanvasUI.NodeUISelectedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.NodeUISelectedEventEmitter
 
call(JIPipeGraphNodeUI.DefaultNodeUIActionRequestedEventListener, JIPipeGraphNodeUI.DefaultNodeUIActionRequestedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI.DefaultNodeUIActionRequestedEventEmitter
 
call(JIPipeGraphNodeUI.NodeUIActionRequestedEventListener, JIPipeGraphNodeUI.NodeUIActionRequestedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI.NodeUIActionRequestedEventEmitter
 
call(NodeDatabaseSearchBox.SelectedEventListener, NodeDatabaseSearchBox.SelectedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox.SelectedEventEmitter
 
call(JIPipeRunnableLogsCollection.LogClearedEventListener, JIPipeRunnableLogsCollection.LogClearedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection.LogClearedEventEmitter
 
call(JIPipeRunnableLogsCollection.LogEntryAddedEventListener, JIPipeRunnableLogsCollection.LogEntryAddedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection.LogEntryAddedEventEmitter
 
call(JIPipeRunnableLogsCollection.LogUpdatedEventListener, JIPipeRunnableLogsCollection.LogUpdatedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection.LogUpdatedEventEmitter
 
call(ProcessUtils.RunCancellationWatchdog.CancelledEventListener, ProcessUtils.RunCancellationWatchdog.CancelledEvent) - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog.CancelledEventEmitter
 
call(MouseClickedEventListener, MouseClickedEvent) - Method in class org.hkijena.jipipe.utils.ui.events.MouseClickedEventEmitter
 
call(MouseDraggedEventListener, MouseDraggedEvent) - Method in class org.hkijena.jipipe.utils.ui.events.MouseDraggedEventEmitter
 
call(MouseEnteredEventListener, MouseEnteredEvent) - Method in class org.hkijena.jipipe.utils.ui.events.MouseEnteredEventEmitter
 
call(MouseExitedEventListener, MouseExitedEvent) - Method in class org.hkijena.jipipe.utils.ui.events.MouseExitedEventEmitter
 
call(MouseMovedEventListener, MouseMovedEvent) - Method in class org.hkijena.jipipe.utils.ui.events.MouseMovedEventEmitter
 
call(MousePressedEventListener, MousePressedEvent) - Method in class org.hkijena.jipipe.utils.ui.events.MousePressedEventEmitter
 
call(MouseReleasedEventListener, MouseReleasedEvent) - Method in class org.hkijena.jipipe.utils.ui.events.MouseReleasedEventEmitter
 
canActivate(JIPipeValidationReport, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.OMEROPlugin
 
canActivate(JIPipeValidationReport, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.JIPipePlugin
Returns true if the extension can be activated.
canAddInputSlot() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
canAddInputSlot() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
canAddInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
canAddInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
canAddInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
canAddInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
canAddInputSlots() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry
 
canAddOrDeleteNodes(JIPipeWorkbench) - Static method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
canAddOutputSlot() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
canAddOutputSlot() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
canAddOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
canAddOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
canAddOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
canAddOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
canAddOutputSlots() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry
 
canAutoPassThrough() - Method in class org.hkijena.jipipe.api.compartments.algorithms.IOInterfaceAlgorithm
 
canAutoPassThrough() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
Returns true if the algorithm can automatically apply pass-through This is only possible if there is at most one input and at most one output.
cancel(String) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
cancel() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
cancel - Variable in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
cancel(JIPipeRunnable) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
Cancels a runnable
cancel(boolean) - Method in class org.hkijena.jipipe.utils.InstantFuture
 
cancelAll() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
 
cancelIf(Predicate<JIPipeRunnable>) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
 
CancelledEvent(ProcessUtils.RunCancellationWatchdog) - Constructor for class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog.CancelledEvent
 
CancelledEventEmitter() - Constructor for class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog.CancelledEventEmitter
 
canClose() - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore
Returns true if the data has no users and thus can be closed
canConnect(JIPipeDataSlot, JIPipeDataSlot, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Slow implementation of connection checking that tests for graph cycles
canConnectFast(JIPipeDataSlot, JIPipeDataSlot, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Fast implementation of connection checking without copying the graph
canCreateCompatibleInputSlot(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Returns if an input slot with specified type can be created
canCreateCompatibleInputSlot(Class<? extends JIPipeData>) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
canCreateCompatibleOutputSlot(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Returns if an output slot with specified type can be created
canCreateCompatibleOutputSlot(Class<? extends JIPipeData>) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
canExtract() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory
 
canExtract() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory
Returns if the node can be extracted (copied) from the graph
canModifyInputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
canModifyInputSlots() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
canModifyOutputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
canModifyOutputSlots() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
canModifySlots(JIPipeWorkbench) - Static method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
canNavigate(JIPipeWorkbench) - Method in class org.hkijena.jipipe.api.validation.contexts.GraphNodeValidationReportContext
 
canNavigate(JIPipeWorkbench) - Method in class org.hkijena.jipipe.api.validation.NavigableJIPipeValidationReportContext
 
CannyEdgeDetectorAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge
This is the JIPipe version of the ImageJ plugin ...
CannyEdgeDetectorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm
Instantiates a new node type.
CannyEdgeDetectorAlgorithm(CannyEdgeDetectorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
Returns true if the algorithm can apply pass-through.
canPassThrough() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithAnnotationTable
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.MergeAnnotations
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.FormGeneratorAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.IteratingFormProcessorAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.MergingFormProcessorAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.SimpleIteratingFormProcessorAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.overlay.RenderOverlay3DAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawMaskAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawROIAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.CountROIAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.ExtractParametersAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.ExtractTableAlgorithm
 
canRegister() - Method in class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask
 
canRegister() - Method in interface org.hkijena.jipipe.api.registries.JIPipeNodeRegistrationTask
Returns true if the registration can be done This function should fail as fast as possible
canRegister() - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionRegistrationTask
 
canRemoveInputSlot(String, boolean) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
canRemoveOutputSlot(String, boolean) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
canRenderEdge(JIPipeDataSlot, JIPipeDataSlot, JIPipeGraphEdge) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
canRenderEdge(JIPipeDataSlot, JIPipeDataSlot, JIPipeGraphEdge) - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeToggleableGraphEditorTool
 
canShow(JIPipeDataSlot, JIPipeDataTableMetadataRow, Path) - Method in interface org.hkijena.jipipe.api.data.JIPipeDataImportOperation
Checks if the import is possible
canShowNotification(JIPipeRunWorker) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunQueueNotifier
 
canUserDelete(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns true if the user can delete the algorithm
canUserDelete() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns true if a user can delete this algorithm
canUserDisconnect(JIPipeDataSlot, JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns true if the user can disconnect the slots
canvas - Variable in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
 
CanvasEqualizer - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
 
CanvasEqualizer() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.CanvasEqualizer
 
CanvasEqualizer(CanvasEqualizer) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.CanvasEqualizer
 
CanvasParameters() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.CanvasParameters
 
CanvasParameters(MontageCreator.CanvasParameters) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.CanvasParameters
 
canvasResized() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
CaseFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.control
 
CaseFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.control.CaseFunction
 
CATEGORY_3D - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_ANALYSIS - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_ANNOTATION - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_AUTOMATION - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_BENCHMARK - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_BINARY - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_CELLPROFILER - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_CLASSIFICATION - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_COLOCALIZATION - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_COLOR_PROCESSING - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_COMPLEXITY - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_COOKBOOK - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_DATA_PROCESSING - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_DECONVOLUTION - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_DEEP_LEARNING - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_DENOISING - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_DEVELOPMENT - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_DIGITAL_VOLUME_FLATTENING - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_DIGITAL_VOLUME_UNROLLING - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_ENTROPY - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_EXAMPLE_DATA - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_FEATURE_EXTRACTION - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_FIJI - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_FILTERING - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_FRACTAL_DIMENSION - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_GPU - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_GUT - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_HELP - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_IMAGE_ANALYSIS - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_IMAGE_ANNOTATION - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_IMAGE_SCIENCE - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_IMAGEJ2 - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_IMGLIB - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_IMPORT_EXPORT - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_INTEGRAL_IMAGE - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_INTERACTIVE - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_LIFETIME - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_LISP - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_MACHINE_LEARNING - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_MATHEMATICAL_MORPHOLOGY - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_MATLAB - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_MICROSCOPY - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_MICROTUBULES - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_MONTAGE - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_NEUROANATOMY - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_NEURON - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_NOISE - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_OBJECT_DETECTION - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_OME - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_OPS - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_OPTIC_FLOW - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_PARTICLE_ANALYSIS - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_PATTERN_RECOGNITION - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_PERFUSION - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_PHOTOGRAMMETRY - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_PHOTOGRAPHY - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_PLOTTING - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_PROJECTION - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_REGISTRATION - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_SCIJAVA - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_SCRIPTING - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_SEGMENTATION - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_SKELETON - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_SKELETONIZATION - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_STACKS - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_STATISTICS - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_STITCHING - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_SUPER_RESOLUTION - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_TIME_SIGNAL_ANALYSIS - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_TISSUE - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_TRACKEM2 - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_TRACKING - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_TRANSFORM - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_TUTORIAL - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_TUTORIALS - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_UNCATEGORIZED - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_USER_INTERFACE - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CATEGORY_VISUALIZATION - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
CategoryPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
Contains data for category plots.
CategoryPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.CategoryPlotData
Creates a new instance
CategoryPlotData(CategoryPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.CategoryPlotData
Creates a copy
CeilingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a floor function
CeilingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.CeilingColumnOperation
 
CELL_HEIGHT - Static variable in class org.hkijena.jipipe.ui.grapheditor.nodefinder.NodeFinderDatasetListCellRenderer
 
CellposeAlgorithm - Class in org.hkijena.jipipe.extensions.cellpose.algorithms
Improved version of CellposeAlgorithm_Old that utilizes the Cellpose CLI
CellposeAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
CellposeAlgorithm(CellposeAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
CellposeAlgorithm_Old - Class in org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated
Deprecated.
New implementation will be CellposeAlgorithm2 that is based around the Cellpose CLI
CellposeAlgorithm_Old(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
CellposeAlgorithm_Old(CellposeAlgorithm_Old) - Constructor for class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
CellposeChannelSettings - Class in org.hkijena.jipipe.extensions.cellpose.parameters
 
CellposeChannelSettings() - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeChannelSettings
 
CellposeChannelSettings(CellposeChannelSettings) - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeChannelSettings
 
CellposeEasyInstaller - Class in org.hkijena.jipipe.extensions.cellpose.installers
 
CellposeEasyInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.cellpose.installers.CellposeEasyInstaller
 
CellposeGPUSettings - Class in org.hkijena.jipipe.extensions.cellpose.parameters
 
CellposeGPUSettings() - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeGPUSettings
 
CellposeGPUSettings(CellposeGPUSettings) - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeGPUSettings
 
CellposeModel - Enum in org.hkijena.jipipe.extensions.cellpose
 
CellposeModelData - Class in org.hkijena.jipipe.extensions.cellpose.datatypes
Wrapper around Cellpose models
CellposeModelData(Path) - Constructor for class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeModelData
 
CellposeModelData(byte[], String) - Constructor for class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeModelData
 
CellposeModelData(CellposeModelData) - Constructor for class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeModelData
 
CellposeModelImageJExporter - Class in org.hkijena.jipipe.extensions.cellpose.compat
 
CellposeModelImageJExporter() - Constructor for class org.hkijena.jipipe.extensions.cellpose.compat.CellposeModelImageJExporter
 
CellposeModelImageJImporter - Class in org.hkijena.jipipe.extensions.cellpose.compat
 
CellposeModelImageJImporter() - Constructor for class org.hkijena.jipipe.extensions.cellpose.compat.CellposeModelImageJImporter
 
CellposePlugin - Class in org.hkijena.jipipe.extensions.cellpose
 
CellposePlugin() - Constructor for class org.hkijena.jipipe.extensions.cellpose.CellposePlugin
 
CellposePretrainedModel - Enum in org.hkijena.jipipe.extensions.cellpose
 
cellposeROIJsonToImageJ(Path) - Static method in class org.hkijena.jipipe.extensions.cellpose.CellposeUtils
Converts ROI in a custom Json format to ROIListData
cellposeROIToImageJ(Path) - Static method in class org.hkijena.jipipe.extensions.cellpose.CellposeUtils
Converts a Cellpose ROI to ROIListData according to ...
CellposeSegmentationEnhancementSettings_Old - Class in org.hkijena.jipipe.extensions.cellpose.parameters.deprecated
Deprecated.
CellposeSegmentationEnhancementSettings_Old() - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationEnhancementSettings_Old
Deprecated.
 
CellposeSegmentationEnhancementSettings_Old(CellposeSegmentationEnhancementSettings_Old) - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationEnhancementSettings_Old
Deprecated.
 
CellposeSegmentationModelSettings_Old - Class in org.hkijena.jipipe.extensions.cellpose.parameters.deprecated
Deprecated.
CellposeSegmentationModelSettings_Old() - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationModelSettings_Old
Deprecated.
 
CellposeSegmentationModelSettings_Old(CellposeSegmentationModelSettings_Old) - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationModelSettings_Old
Deprecated.
 
CellposeSegmentationOutputSettings - Class in org.hkijena.jipipe.extensions.cellpose.parameters
 
CellposeSegmentationOutputSettings() - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationOutputSettings
 
CellposeSegmentationOutputSettings(CellposeSegmentationOutputSettings) - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationOutputSettings
 
CellposeSegmentationOutputSettings_Old - Class in org.hkijena.jipipe.extensions.cellpose.parameters.deprecated
Deprecated.
Used by the old CellposeAlgorithm_Old
CellposeSegmentationOutputSettings_Old() - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationOutputSettings_Old
Deprecated.
 
CellposeSegmentationOutputSettings_Old(CellposeSegmentationOutputSettings_Old) - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationOutputSettings_Old
Deprecated.
 
CellposeSegmentationPerformanceSettings_Old - Class in org.hkijena.jipipe.extensions.cellpose.parameters.deprecated
Deprecated.
CellposeSegmentationPerformanceSettings_Old() - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationPerformanceSettings_Old
Deprecated.
 
CellposeSegmentationPerformanceSettings_Old(CellposeSegmentationPerformanceSettings_Old) - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationPerformanceSettings_Old
Deprecated.
 
CellposeSegmentationThresholdSettings - Class in org.hkijena.jipipe.extensions.cellpose.parameters
 
CellposeSegmentationThresholdSettings() - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationThresholdSettings
 
CellposeSegmentationThresholdSettings(CellposeSegmentationThresholdSettings) - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationThresholdSettings
 
CellposeSegmentationThresholdSettings_Old - Class in org.hkijena.jipipe.extensions.cellpose.parameters.deprecated
Deprecated.
CellposeSegmentationThresholdSettings_Old() - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationThresholdSettings_Old
Deprecated.
 
CellposeSegmentationThresholdSettings_Old(CellposeSegmentationThresholdSettings_Old) - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationThresholdSettings_Old
Deprecated.
 
CellposeSegmentationTweaksSettings - Class in org.hkijena.jipipe.extensions.cellpose.parameters
 
CellposeSegmentationTweaksSettings() - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationTweaksSettings
 
CellposeSegmentationTweaksSettings(CellposeSegmentationTweaksSettings) - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationTweaksSettings
 
CellposeSettings - Class in org.hkijena.jipipe.extensions.cellpose
 
CellposeSettings() - Constructor for class org.hkijena.jipipe.extensions.cellpose.CellposeSettings
 
CellposeSizeModelData - Class in org.hkijena.jipipe.extensions.cellpose.datatypes
Wrapper around Cellpose models
CellposeSizeModelData(Path) - Constructor for class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeSizeModelData
 
CellposeSizeModelData(byte[], String) - Constructor for class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeSizeModelData
 
CellposeSizeModelData(CellposeSizeModelData) - Constructor for class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeSizeModelData
 
CellposeSizeModelImageJExporter - Class in org.hkijena.jipipe.extensions.cellpose.compat
 
CellposeSizeModelImageJExporter() - Constructor for class org.hkijena.jipipe.extensions.cellpose.compat.CellposeSizeModelImageJExporter
 
CellposeSizeModelImageJImporter - Class in org.hkijena.jipipe.extensions.cellpose.compat
 
CellposeSizeModelImageJImporter() - Constructor for class org.hkijena.jipipe.extensions.cellpose.compat.CellposeSizeModelImageJImporter
 
CellposeTrainingAlgorithm - Class in org.hkijena.jipipe.extensions.cellpose.algorithms
 
CellposeTrainingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
CellposeTrainingAlgorithm(CellposeTrainingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
CellposeTrainingAlgorithm_Old - Class in org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated
Deprecated.
CellposeTrainingAlgorithm_Old(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
CellposeTrainingAlgorithm_Old(CellposeTrainingAlgorithm_Old) - Constructor for class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
CellposeTrainingTweaksSettings - Class in org.hkijena.jipipe.extensions.cellpose.parameters
 
CellposeTrainingTweaksSettings() - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeTrainingTweaksSettings
 
CellposeTrainingTweaksSettings(CellposeTrainingTweaksSettings) - Constructor for class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeTrainingTweaksSettings
 
CellposeUtils - Class in org.hkijena.jipipe.extensions.cellpose
 
center - Variable in class org.hkijena.jipipe.utils.PointRange
 
centerAt(Point3d) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Center the view at the given point.
CenteredRectangleImageJ2ShapeData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.shapes
 
CenteredRectangleImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData
 
CenteredRectangleImageJ2ShapeData(RectangleShape) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData
 
CenteredRectangleImageJ2ShapeData(CenteredRectangleImageJ2ShapeData) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData
 
centerImage() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
centerX - Variable in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines
 
centerY - Variable in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines
 
ChamferDistanceMap2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap
 
ChamferDistanceMap2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap2DAlgorithm
Instantiates a new node type.
ChamferDistanceMap2DAlgorithm(ChamferDistanceMap2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap2DAlgorithm
Instantiates a new node type.
ChamferDistanceMap3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap
 
ChamferDistanceMap3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap3DAlgorithm
Instantiates a new node type.
ChamferDistanceMap3DAlgorithm(ChamferDistanceMap3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap3DAlgorithm
Instantiates a new node type.
changed(DocumentEvent) - Method in class org.hkijena.jipipe.ui.components.DocumentChangeListener
All-in-one event for insertion, removal, change
changedUpdate(DocumentEvent) - Method in class org.hkijena.jipipe.ui.components.DocumentChangeListener
 
changedUpdate(DocumentEvent, Shape, ViewFactory) - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Invoked when the Elements attributes have changed.
ChangeFilamentEdgePropertiesAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.modify
 
ChangeFilamentEdgePropertiesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesAlgorithm
 
ChangeFilamentEdgePropertiesAlgorithm(ChangeFilamentEdgePropertiesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesAlgorithm
 
ChangeFilamentVertexPropertiesAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.modify
 
ChangeFilamentVertexPropertiesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
ChangeFilamentVertexPropertiesAlgorithm(ChangeFilamentVertexPropertiesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
ChangeImageMetadataFromExpressionsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata
Wrapper around RoiManager
ChangeImageMetadataFromExpressionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.ChangeImageMetadataFromExpressionsAlgorithm
Instantiates a new node type.
ChangeImageMetadataFromExpressionsAlgorithm(ChangeImageMetadataFromExpressionsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.ChangeImageMetadataFromExpressionsAlgorithm
Instantiates a new node type.
ChangeRoi3DPropertiesAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify
 
ChangeRoi3DPropertiesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
ChangeRoi3DPropertiesAlgorithm(ChangeRoi3DPropertiesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
ChangeRoi3DPropertiesFromExpressionsAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify
 
ChangeRoi3DPropertiesFromExpressionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
ChangeRoi3DPropertiesFromExpressionsAlgorithm(ChangeRoi3DPropertiesFromExpressionsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify
 
ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify
 
ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm
 
ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm(ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm
 
ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify
 
ChangeRoiPropertiesAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify
Wrapper around RoiManager
ChangeRoiPropertiesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
Instantiates a new node type.
ChangeRoiPropertiesAlgorithm(ChangeRoiPropertiesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
Instantiates a new node type.
ChangeRoiPropertiesFromAnnotationsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify
Wrapper around RoiManager
ChangeRoiPropertiesFromAnnotationsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
Instantiates a new node type.
ChangeRoiPropertiesFromAnnotationsAlgorithm(ChangeRoiPropertiesFromAnnotationsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
Instantiates a new node type.
ChangeRoiPropertiesFromExpressionsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify
Wrapper around RoiManager
ChangeRoiPropertiesFromExpressionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
Instantiates a new node type.
ChangeRoiPropertiesFromExpressionsAlgorithm(ChangeRoiPropertiesFromExpressionsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
Instantiates a new node type.
ChangeRoiPropertiesFromExpressionsAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify
 
Channel() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel
Deprecated.
 
Channel(Color) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel
Deprecated.
 
Channel(Color, double) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel
Deprecated.
 
Channel(OverlayImagesAlgorithm.Channel) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel
Deprecated.
 
channelsToRGB(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converted a 3-channel image into RGB (reducing the dimensionality)
checkAndAskIfFileExists(Component, Path, String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Checks if a file exists and asks the user if it should be overwritten
CheckBoxAction - Class in org.hkijena.jipipe.ui.components.ribbon
 
CheckBoxAction(String, String) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.CheckBoxAction
 
CheckBoxAction(String, String, boolean, Consumer<JCheckBox>) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.CheckBoxAction
 
CheckBoxIcon - Class in org.hkijena.jipipe.utils.ui
Taken from MetalIconFactory
CheckBoxIcon(Color) - Constructor for class org.hkijena.jipipe.utils.ui.CheckBoxIcon
 
CheckBoxMenuItemIcon - Class in org.hkijena.jipipe.utils.ui
Taken from MetalIconFactory
CheckBoxMenuItemIcon(Color) - Constructor for class org.hkijena.jipipe.utils.ui.CheckBoxMenuItemIcon
 
checkExtensionDependencies(JIPipeWorkbench) - Static method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
 
checkIlastikSettings(JIPipeValidationReportContext, JIPipeValidationReport) - Static method in class org.hkijena.jipipe.extensions.ilastik.IlastikSettings
Checks if the Python settings are valid or reports an invalid state
checkPythonSettings(JIPipeValidationReportContext, JIPipeValidationReport) - Static method in class org.hkijena.jipipe.extensions.cellpose.CellposeSettings
Checks if the Python settings are valid or reports an invalid state
checkPythonSettings(JIPipeValidationReportContext, JIPipeValidationReport) - Static method in class org.hkijena.jipipe.extensions.omnipose.OmniposeSettings
Checks if the Python settings are valid or reports an invalid state
checkPythonSettings(JIPipeValidationReportContext, JIPipeValidationReport) - Static method in class org.hkijena.jipipe.extensions.python.PythonExtensionSettings
Checks if the Python settings are valid or reports an invalid state
checkRSettings(JIPipeValidationReportContext, JIPipeValidationReport) - Static method in class org.hkijena.jipipe.extensions.r.RExtensionSettings
Checks if the R settings are valid or reports an invalid state
checkScriptParametersValidity(JIPipeCustomParameterCollection, JIPipeValidationReportContext, JIPipeValidationReport) - Static method in class org.hkijena.jipipe.utils.scripting.JythonUtils
 
checkScriptValidity(String, JIPipeCustomParameterCollection, JIPipeValidationReportContext, JIPipeValidationReport) - Static method in class org.hkijena.jipipe.utils.scripting.JythonUtils
 
checkSyntax(String) - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
Checks the syntax of an expression.
checkUnindexedNormalsArray(float[], float[]) - Static method in class org.hkijena.jipipe.extensions.scene3d.utils.Scene3DUtils
 
checkUnindexedPolygonArray(float[]) - Static method in class org.hkijena.jipipe.extensions.scene3d.utils.Scene3DUtils
 
checkUpdateSites(JIPipeRegistryIssues, List<JIPipeDependency>, Progress, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.JIPipe
Checks the update sites of all extensions and stores the results in the issues
choosePath() - Method in class org.hkijena.jipipe.ui.components.PathEditor
Opens the file chooser
CircularHoughSegmentation2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
Segments using a Hough circle transform
CircularHoughSegmentation2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
CircularHoughSegmentation2DAlgorithm(CircularHoughSegmentation2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
Copies the algorithm
CLAHEContrastEnhancer - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast
Applies CLAHE image enhancing
CLAHEContrastEnhancer(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer
 
CLAHEContrastEnhancer(CLAHEContrastEnhancer) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer
Copies the algorithm
ClampFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.math
 
ClampFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.math.ClampFunction
 
ClampNegativeColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a min(0, x) function
ClampNegativeColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.ClampNegativeColumnOperation
 
ClampPositiveColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a max(0, x) function
ClampPositiveColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.ClampPositiveColumnOperation
 
classExists(String) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
 
ClassFilter - Interface in org.hkijena.jipipe.utils.classfilters
 
ClassicWatershedSegmentationAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment
 
ClassicWatershedSegmentationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm
 
ClassicWatershedSegmentationAlgorithm(ClassicWatershedSegmentationAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm
 
cleanGraph(JIPipeGraph, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun
 
cleanup(Map<String, Path>, Map<String, Path>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
 
clear() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Removes all rows from this table
clear() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
clear() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal
 
clear() - Method in class org.hkijena.jipipe.api.history.JIPipeDummyGraphHistoryJournal
 
clear() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Clears the journal
clear() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal
 
clear() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Clears this graph
clear() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Removes all parameters
clear() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
Clears the table
clear() - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
clear() - Method in class org.hkijena.jipipe.ui.components.FormPanel
Removes all components
clear() - Method in class org.hkijena.jipipe.ui.components.MessagePanel
 
clear() - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon
Clears the ribbon.
clear() - Method in class org.hkijena.jipipe.ui.components.UserFriendlyErrorUI
 
clear() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection
 
clearAll(JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache
Clears the cache
clearAll(UUID, boolean, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache
Clears the cache of the specified node
clearAll(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache
 
clearAll(UUID, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache
 
ClearCacheNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
ClearCacheNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ClearCacheNodeUIContextAction
 
clearCurrentMask() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
clearData() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Removes all rows from this table
ClearedEvent(JIPipeCache, UUID) - Constructor for class org.hkijena.jipipe.api.cache.JIPipeCache.ClearedEvent
 
ClearedEventEmitter() - Constructor for class org.hkijena.jipipe.api.cache.JIPipeCache.ClearedEventEmitter
 
clearFilaments() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
clearInputSlots(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Removes all input slots
clearLocations() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Removes all location information added via setLocationWithin()
clearLog() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
clearOutdated(JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache
Removes all outdated entries
clearOutdated(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache
 
clearOutputSlots(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Removes all output slots
clearOverlays() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
clearPreviewCache() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
clearQueue() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
Removes all enqueued (but not running tasks)
clearROIs() - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
clearROIs(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
clearSchedule(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
clearSearch() - Method in class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox
Clears the search field
clearSelection() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Clears the list of selected algorithms
clearSelection() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
Clears the algorithm selection
clearSeries() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
Removes all series
clearSlotData() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Clears all data slots
CLIIJ2DataToImageWindowImageJExporter - Class in org.hkijena.jipipe.extensions.clij2.compat
 
CLIIJ2DataToImageWindowImageJExporter() - Constructor for class org.hkijena.jipipe.extensions.clij2.compat.CLIIJ2DataToImageWindowImageJExporter
 
CLIJ2DataFromImageWindowImageJImporter - Class in org.hkijena.jipipe.extensions.clij2.compat
 
CLIJ2DataFromImageWindowImageJImporter() - Constructor for class org.hkijena.jipipe.extensions.clij2.compat.CLIJ2DataFromImageWindowImageJImporter
 
Clij2ExecuteKernelIterating - Class in org.hkijena.jipipe.extensions.clij2.algorithms
 
Clij2ExecuteKernelIterating(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelIterating
 
Clij2ExecuteKernelIterating(Clij2ExecuteKernelIterating) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelIterating
 
Clij2ExecuteKernelSimpleIterating - Class in org.hkijena.jipipe.extensions.clij2.algorithms
 
Clij2ExecuteKernelSimpleIterating(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelSimpleIterating
 
Clij2ExecuteKernelSimpleIterating(Clij2ExecuteKernelSimpleIterating) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelSimpleIterating
 
Clij2PullAlgorithm - Class in org.hkijena.jipipe.extensions.clij2.algorithms
 
Clij2PullAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2PullAlgorithm
 
Clij2PullAlgorithm(Clij2PullAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2PullAlgorithm
 
Clij2PushAlgorithm - Class in org.hkijena.jipipe.extensions.clij2.algorithms
 
Clij2PushAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2PushAlgorithm
 
Clij2PushAlgorithm(Clij2PushAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2PushAlgorithm
 
CLIJCommandNode - Class in org.hkijena.jipipe.extensions.clij2
 
CLIJCommandNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.CLIJCommandNode
 
CLIJCommandNode(CLIJCommandNode) - Constructor for class org.hkijena.jipipe.extensions.clij2.CLIJCommandNode
 
CLIJCommandNodeInfo - Class in org.hkijena.jipipe.extensions.clij2
 
CLIJCommandNodeInfo(Context, PluginInfo<CLIJMacroPlugin>, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
CLIJCommandNodeInfo.OutputTableColumnInfo - Class in org.hkijena.jipipe.extensions.clij2
 
CLIJControlPanel - Class in org.hkijena.jipipe.extensions.clij2.ui
Graphical control panel for CLIJ
CLIJControlPanel(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.clij2.ui.CLIJControlPanel
 
CLIJControlPanelJIPipeMenuExtension - Class in org.hkijena.jipipe.extensions.clij2.ui
Adds a menu item that allows to control CLIJ
CLIJControlPanelJIPipeMenuExtension(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.clij2.ui.CLIJControlPanelJIPipeMenuExtension
Creates a new instance
CLIJImageData - Class in org.hkijena.jipipe.extensions.clij2.datatypes
Contains a CLIJ image
CLIJImageData(ClearCLBuffer) - Constructor for class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageData
Initializes a new instance from an existing buffer
CLIJImageData(ImagePlusData) - Constructor for class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageData
Initializes an instance by copying data from ImagePlusData
CLIJImageData(CLIJImageData) - Constructor for class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageData
Makes a copy
CLIJImageToImagePlusDataConverter - Class in org.hkijena.jipipe.extensions.clij2.datatypes
Converter from CLIJImageData to ImagePlusData
CLIJImageToImagePlusDataConverter(Class<? extends JIPipeData>) - Constructor for class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageToImagePlusDataConverter
 
CLIJImageViewerCustomDataLoader - Class in org.hkijena.jipipe.extensions.clij2.datatypes
 
CLIJImageViewerCustomDataLoader() - Constructor for class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageViewerCustomDataLoader
 
CLIJPlugin - Class in org.hkijena.jipipe.extensions.clij2
Integrates CLIJ
CLIJPlugin() - Constructor for class org.hkijena.jipipe.extensions.clij2.CLIJPlugin
 
CLIJSettings - Class in org.hkijena.jipipe.extensions.clij2
Settings for CLIJ
CLIJSettings() - Constructor for class org.hkijena.jipipe.extensions.clij2.CLIJSettings
 
CLIJSettings.ContrastEnhancerSettings - Class in org.hkijena.jipipe.extensions.clij2
 
cloneTableModel(TableModel) - Static method in class org.hkijena.jipipe.utils.TableUtils
Copies a table
close() - Method in interface org.hkijena.jipipe.api.data.JIPipeData
 
close() - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore
 
close() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage
 
close() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage
 
close() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage
 
close() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPWriteDataStorage
 
close() - Method in class org.hkijena.jipipe.api.JIPipeFixedThreadPool
 
close() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfoOutputStream
 
close() - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageData
 
close() - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROGateway
 
close() - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROImageUploader
 
close() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameterEditorUI.ExternalEditor
 
close() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameterEditorUI.ExternalFileExternalEditor
 
close() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameterEditorUI.TabExternalEditor
 
close() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameterEditorUI.WindowExternalEditor
 
close() - Method in class org.hkijena.jipipe.utils.IJLogToJIPipeProgressInfoPump
 
close() - Method in class org.hkijena.jipipe.utils.ui.BusyCursor
 
CloseAllImageJWindowsTool - Class in org.hkijena.jipipe.extensions.tools
 
CloseAllImageJWindowsTool(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.tools.CloseAllImageJWindowsTool
Creates a new instance
closeAllTabs(boolean) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Closes all tabs
closeAllTabsExcept(DocumentTabPane.DocumentTab, boolean) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Closes all tabs except the provided one.
closeMessage() - Method in class org.hkijena.jipipe.ui.components.MessagePanel.Message
 
closeTab(DocumentTabPane.DocumentTab, boolean) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Closes a tab.
closeTab(DocumentTabPane.DocumentTab) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Closes the tab.
collapse(IOInterfaceAlgorithm) - Static method in class org.hkijena.jipipe.api.compartments.algorithms.IOInterfaceAlgorithm
Removes the interface and directly connects the inputs and outputs
CollapseIOInterfaceNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
CollapseIOInterfaceNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.CollapseIOInterfaceNodeUIContextAction
 
CollectBackupsRun - Class in org.hkijena.jipipe.api.backups
 
CollectBackupsRun() - Constructor for class org.hkijena.jipipe.api.backups.CollectBackupsRun
 
CollectTraceRun - Class in org.hkijena.jipipe.ui.datatracer
 
CollectTraceRun(JIPipeProjectWorkbench, JIPipeGraphNode, String, UUID, JIPipeDataTable, int) - Constructor for class org.hkijena.jipipe.ui.datatracer.CollectTraceRun
 
Coloc2Node - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization
 
Coloc2Node(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
Coloc2Node(Coloc2Node) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
Coloc2Node.Settings - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization
 
ColocResult(DataContainer<T>, AnalysisResults<T>) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.CustomColoc2.ColocResult
 
COLOR_CONSTANT - Static variable in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderUI
 
COLOR_CREATE - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBoxListCellRenderer
 
COLOR_DISABLED_1 - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
COLOR_DISABLED_2 - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
COLOR_EXTENSION - Static variable in class org.hkijena.jipipe.extensions.nodetemplate.JIPipeNodeTemplateListCellRenderer
 
COLOR_FUNCTION - Static variable in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderUI
 
COLOR_GLOBAL - Static variable in class org.hkijena.jipipe.extensions.nodetemplate.JIPipeNodeTemplateListCellRenderer
 
COLOR_HIGHLIGHT - Static variable in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantInputPreviewPanelTable
 
COLOR_HIGHLIGHT - Static variable in class org.hkijena.jipipe.ui.datatracer.DataTrackerNodeOutputUI
 
COLOR_HIGHLIGHT_CELL - Static variable in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantInputPreviewPanelTable
 
COLOR_HIGHLIGHT_GREEN - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
COLOR_MAP - Static variable in class org.hkijena.jipipe.utils.ColorUtils
 
COLOR_NAVIGATE - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBoxListCellRenderer
 
COLOR_OPERATOR - Static variable in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderUI
 
COLOR_PROJECT - Static variable in class org.hkijena.jipipe.extensions.nodetemplate.JIPipeNodeTemplateListCellRenderer
 
COLOR_RESIZE_HANDLE_BORDER - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
COLOR_RESIZE_HANDLE_FILL - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
COLOR_RUN_BUTTON_ICON - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
COLOR_SELECTED - Static variable in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.TrackRenderer
 
COLOR_SELECTED - Static variable in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl.TrackRenderer
 
COLOR_SLOT_CACHED - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
COLOR_SLOT_DISCONNECTED - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
COLOR_STRING - Static variable in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderUI
 
COLOR_UNSELECTED - Static variable in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.TrackRenderer
 
COLOR_UNSELECTED - Static variable in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl.TrackRenderer
 
COLOR_VARIABLE - Static variable in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderUI
 
ColorChooserButton - Class in org.hkijena.jipipe.ui.components
 
ColorChooserButton() - Constructor for class org.hkijena.jipipe.ui.components.ColorChooserButton
 
ColorChooserButton(String) - Constructor for class org.hkijena.jipipe.ui.components.ColorChooserButton
 
ColorChooserButton.ColorChosenEvent - Class in org.hkijena.jipipe.ui.components
 
ColorChooserButton.ColorChosenEventEmitter - Class in org.hkijena.jipipe.ui.components
 
ColorChooserButton.ColorChosenEventListener - Interface in org.hkijena.jipipe.ui.components
 
ColorChosenEvent(ColorChooserButton, Color) - Constructor for class org.hkijena.jipipe.ui.components.ColorChooserButton.ColorChosenEvent
 
ColorChosenEventEmitter() - Constructor for class org.hkijena.jipipe.ui.components.ColorChooserButton.ColorChosenEventEmitter
 
ColorDeserializer - Class in org.hkijena.jipipe.extensions.parameters.library.colors
Deserializer for Color
ColorDeserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.colors.ColorDeserializer
 
ColorIcon - Interface in org.hkijena.jipipe.ui.components.icons
 
ColorImageData - Interface in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color
Annotates a data type as color image
ColorListParameter - Class in org.hkijena.jipipe.extensions.parameters.library.colors
 
ColorListParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.colors.ColorListParameter
 
ColorListParameter(Collection<Color>) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.colors.ColorListParameter
 
ColorMap - Enum in org.hkijena.jipipe.extensions.parameters.library.colors
All available color maps
ColorMap - Enum in org.hkijena.jipipe.extensions.plots.utils
 
ColorMapEnumItemInfo - Class in org.hkijena.jipipe.extensions.parameters.library.colors
EnumItemInfo implementation for ColorMap
ColorMapEnumItemInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.colors.ColorMapEnumItemInfo
Creates a new instance
ColorMapEnumItemInfo - Class in org.hkijena.jipipe.extensions.plots.utils
 
ColorMapEnumItemInfo() - Constructor for class org.hkijena.jipipe.extensions.plots.utils.ColorMapEnumItemInfo
 
ColorMapIcon - Class in org.hkijena.jipipe.extensions.parameters.library.colors
Icon that renders a color map entry
ColorMapIcon() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.colors.ColorMapIcon
Creates a 16x16 black icon
ColorMapIcon(int, int) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.colors.ColorMapIcon
Creates a viridis icon
ColorMapIcon(int, int, ColorMap) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.colors.ColorMapIcon
 
ColorMapIcon - Class in org.hkijena.jipipe.extensions.plots.utils
 
ColorMapIcon(int, int, ColorMap) - Constructor for class org.hkijena.jipipe.extensions.plots.utils.ColorMapIcon
 
ColorMapSupplier - Class in org.hkijena.jipipe.extensions.plots.utils
Provides a color palette
ColorMapSupplier(Paint[]) - Constructor for class org.hkijena.jipipe.extensions.plots.utils.ColorMapSupplier
 
ColorParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.colors
Parameter editor for String
ColorParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.colors.ColorParameterEditorUI
 
ColorPixel5DExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
Variable source that allows to address x, y
ColorPixel5DExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ColorPixel5DExpressionParameterVariablesInfo
 
ColorRoi3DByNameAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify
 
ColorRoi3DByNameAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ColorRoi3DByNameAlgorithm
Instantiates a new node type.
ColorRoi3DByNameAlgorithm(ColorRoi3DByNameAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ColorRoi3DByNameAlgorithm
Instantiates a new node type.
ColorRoi3DByStatisticsAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify
Wrapper around RoiManager
ColorRoi3DByStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ColorRoi3DByStatisticsAlgorithm
 
ColorRoi3DByStatisticsAlgorithm(ColorRoi3DByStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ColorRoi3DByStatisticsAlgorithm
 
ColorRoiByNameAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify
 
ColorRoiByNameAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByNameAlgorithm
Instantiates a new node type.
ColorRoiByNameAlgorithm(ColorRoiByNameAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByNameAlgorithm
Instantiates a new node type.
ColorRoiByStatisticsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify
Wrapper around RoiManager
ColorRoiByStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm
Instantiates a new node type.
ColorRoiByStatisticsAlgorithm(ColorRoiByStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm
Instantiates a new node type.
ColorSerializer - Class in org.hkijena.jipipe.extensions.parameters.library.colors
Serializer for Color
ColorSerializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.colors.ColorSerializer
 
ColorSpace - Interface in org.hkijena.jipipe.extensions.imagejdatatypes.colorspace
A class that governs conversion between color spaces
ColorSpaceConverterAlgorithm - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color
 
ColorSpaceConverterAlgorithm(JIPipeNodeInfo, Class<? extends ImagePlusData>) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color.ColorSpaceConverterAlgorithm
 
ColorSpaceConverterAlgorithm(ColorSpaceConverterAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color.ColorSpaceConverterAlgorithm
 
ColorThresholdExpression2D - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color
 
ColorThresholdExpression2D(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ColorThresholdExpression2D
 
ColorThresholdExpression2D(ColorThresholdExpression2D) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ColorThresholdExpression2D
 
ColorToGreyscaleExpression2D - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color
 
ColorToGreyscaleExpression2D(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.ColorToGreyscaleExpression2D
 
ColorToGreyscaleExpression2D(ColorToGreyscaleExpression2D) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.ColorToGreyscaleExpression2D
 
colorToHexString(Color) - Static method in class org.hkijena.jipipe.utils.ColorUtils
Converts a color to a Hex string
ColorUtils - Class in org.hkijena.jipipe.utils
 
ColorUtils() - Constructor for class org.hkijena.jipipe.utils.ColorUtils
 
ColorUtils.GradientStop - Class in org.hkijena.jipipe.utils
 
Column() - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column
 
Column(DefineParametersFromTableAlgorithm.Column) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column
 
Column() - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column
 
Column(GenerateParametersFromExpressionAlgorithm.Column) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column
 
column - Variable in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.Index
 
ColumnContentType - Enum in org.hkijena.jipipe.extensions.tables
Available column content types
ColumnOperation - Interface in org.hkijena.jipipe.extensions.tables
An operation on a TableColumn
ColumnOperationAdapterFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
ColumnOperationAdapterFunction(ColumnOperation, String) - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.ColumnOperationAdapterFunction
 
ColumnOperationEntry(String, ColumnOperation, String, String, String) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ColumnOperationEntry
Creates a new entry
ColumnsToAnnotationsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.columns
 
ColumnsToAnnotationsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnsToAnnotationsAlgorithm
 
ColumnsToAnnotationsAlgorithm(ColumnsToAnnotationsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnsToAnnotationsAlgorithm
 
ColumnToNumericAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.columns
Algorithm that removes columns
ColumnToNumericAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnToNumericAlgorithm
Creates a new instance
ColumnToNumericAlgorithm(ColumnToNumericAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnToNumericAlgorithm
Creates a copy
ColumnToStringAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.columns
Algorithm that removes columns
ColumnToStringAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnToStringAlgorithm
Creates a new instance
ColumnToStringAlgorithm(ColumnToStringAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnToStringAlgorithm
Creates a copy
CombineChannelsToRGBAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color
 
CombineChannelsToRGBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.CombineChannelsToRGBAlgorithm
 
CombineChannelsToRGBAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.CombineChannelsToRGBAlgorithm
 
combineSlices(Map<ImageSliceIndex, ImageProcessor>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Combines the slices in the map into one image.
compare(T, T) - Method in class org.hkijena.jipipe.utils.NaturalOrderComparator
 
comparePlugins(PluginInfo<?>, PluginInfo<?>) - Static method in class org.hkijena.jipipe.JIPipe
Compares two plugins and sorts them by priority
comparePriority(JIPipeParameterAccess, JIPipeParameterAccess) - Static method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Compares the priority
compareTo(JIPipeTextAnnotation) - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
 
compareTo(JIPipeDataInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
 
compareTo(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
 
compareTo(JIPipeSingleIterationStep) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
 
compareTo(JIPipeNotification) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
compareTo(JIPipeParameterTypeInfo) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterTypeInfo
 
compareTo(ConnectVerticesAlgorithm.EdgeCandidate) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm.EdgeCandidate
 
compareTo(FixOverlapsNonBranchingAlgorithm.EdgeCandidate) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm.EdgeCandidate
 
compareTo(HoughLines.HoughLine) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines.HoughLine
 
compareTo(JIPipeGraphCanvasUI.DisplayedSlotEdge) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
compareTo(JIPipeNodeUIActiveArea) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUIActiveArea
 
compareTo(ColorUtils.GradientStop) - Method in class org.hkijena.jipipe.utils.ColorUtils.GradientStop
 
compareTo(RankedData<T>) - Method in class org.hkijena.jipipe.utils.search.RankedData
 
compareVersions(String, String) - Static method in class org.hkijena.jipipe.utils.StringUtils
Compares two version strings.
compareVersions(String, String) - Static method in class org.hkijena.jipipe.utils.VersionUtils
Similar to StringUtils compareVersions, but supports the 'Development' version
CompartmentAddedEvent(JIPipeProjectCompartment) - Constructor for class org.hkijena.jipipe.api.JIPipeProject.CompartmentAddedEvent
 
CompartmentAddedEventEmitter() - Constructor for class org.hkijena.jipipe.api.JIPipeProject.CompartmentAddedEventEmitter
 
CompartmentNodeTypeCategory - Class in org.hkijena.jipipe.api.compartments.algorithms
 
CompartmentNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory
 
CompartmentRemovedEvent(JIPipeProjectCompartment, UUID) - Constructor for class org.hkijena.jipipe.api.JIPipeProject.CompartmentRemovedEvent
 
CompartmentRemovedEventEmitter() - Constructor for class org.hkijena.jipipe.api.JIPipeProject.CompartmentRemovedEventEmitter
 
componentHidden(ComponentEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
ComponentListCellRenderer<T extends Component> - Class in org.hkijena.jipipe.ui.components.renderers
 
ComponentListCellRenderer(Icon) - Constructor for class org.hkijena.jipipe.ui.components.renderers.ComponentListCellRenderer
 
componentMoved(ComponentEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
componentResized(ComponentEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
componentShown(ComponentEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
composePixel(int...) - Method in interface org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.ColorSpace
Converts an array of channel values into a pixel
composePixel(int...) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.GreyscaleColorSpace
 
composePixel(int...) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.HSBColorSpace
 
composePixel(int...) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.IgnoreColorSpace
 
composePixel(int...) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.LABColorSpace
 
composePixel(int...) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.RGBColorSpace
 
CompositeLayer(int) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D.CompositeLayer
 
CompositeLayer(ImageViewerPanel2D.CompositeLayer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D.CompositeLayer
 
CompositeManagerPlugin2D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d
 
CompositeManagerPlugin2D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.CompositeManagerPlugin2D
 
computeDefaultBarWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator
There is no hard codded value for the width of the scalebar, when the plugin is called for the first time in an ImageJ instance, a defautl value for the width will be computed by this method.
computeEdgeFeatures(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
 
computeFileSHA1(File) - Static method in class org.hkijena.jipipe.utils.PathUtils
Computes the SHA1 of a file
computeTrackFeatures(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
 
ConcatenateByParameter - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Applies subfolder navigation to each input folder
ConcatenateByParameter(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ConcatenateByParameter
 
ConcatenateByParameter(ConcatenateByParameter) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ConcatenateByParameter
Copies the algorithm
ConcatenatePaths - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Applies subfolder navigation to each input folder
ConcatenatePaths(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ConcatenatePaths
 
ConcatenatePaths(ConcatenatePaths) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ConcatenatePaths
Copies the algorithm
ConditionalInverterAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary
 
ConditionalInverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConditionalInverterAlgorithm
 
ConditionalInverterAlgorithm(ConditionalInverterAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConditionalInverterAlgorithm
 
ConditionalInverterAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.cellpose.installers.MinicondaCellposeEnvInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.cellpose.installers.MinicondaCellposeGPUEnvInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.cellpose.installers.PortableCellposeEnvInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.cellpose.installers.PortableCellposeGPUEnvInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.python.installers.MinicondaEnvPythonInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.python.installers.PortableEnvPythonInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.python.installers.SelectCondaEnvPythonInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.python.installers.SelectSystemPythonInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.python.installers.SelectVirtualEnvPythonInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.r.installers.REnvInstaller.Configuration
 
configure(ImageJExportParameters) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
Overrides parameters if enabled
configure(ImageJImportParameters) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRef
Overrides parameters if enabled
configure() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
UI configuration
configure() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller
UI configuration
configureDefaultImageJAdapters(Class<? extends JIPipeData>, String, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Sets the default ImageJ adapters
configureDefaultImageJAdapters(Class<? extends JIPipeData>, ImageJDataImporter, ImageJDataExporter) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Sets the default ImageJ adapters
ConfigureJIPipeNode - Annotation Type in org.hkijena.jipipe.api
Annotations used for organizing elements
confirmResetParameters(JIPipeWorkbench, String) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
ConflictDialog - Class in org.hkijena.jipipe.ui.ijupdater
Copy of ConflictDialog because the original one expects an UpdaterFrame
ConflictDialog(Window, String) - Constructor for class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
conflictList - Variable in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
conflicts - Variable in class org.hkijena.jipipe.ui.ijupdater.ResolveDependencies
 
connect(JIPipeDataSlot, JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Connects an output slot to an input slot.
connect(JIPipeDataSlot, JIPipeDataSlot, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Connects an output slot to an input slot.
connectCompartments(JIPipeProjectCompartment, JIPipeProjectCompartment) - Method in class org.hkijena.jipipe.api.JIPipeProject
Connects two compartments
connectDismissTo(JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox
Connects all dismisses in this notification inbox to another notification inbox
connectedComponents3D(ImagePlus, Neighborhood3D, int) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.ImageJAlgorithmUtils
 
ConnectedComponentsLabeling2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary
 
ConnectedComponentsLabeling2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling2DAlgorithm
Instantiates a new node type.
ConnectedComponentsLabeling2DAlgorithm(ConnectedComponentsLabeling2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling2DAlgorithm
Instantiates a new node type.
ConnectedComponentsLabeling3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary
 
ConnectedComponentsLabeling3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling3DAlgorithm
Instantiates a new node type.
ConnectedComponentsLabeling3DAlgorithm(ConnectedComponentsLabeling3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling3DAlgorithm
Instantiates a new node type.
ConnectHighlight(JIPipeNodeUISlotActiveArea, JIPipeNodeUISlotActiveArea) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.ConnectHighlight
 
connectSlot(JIPipeDataSlot, JIPipeDataSlot) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Connects the two slots
ConnectVerticesAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.modify
 
ConnectVerticesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
ConnectVerticesAlgorithm(ConnectVerticesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
ConnectVerticesAlgorithm.EdgeCandidate - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.modify
 
CONSTANT_E - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
CONSTANT_FALSE - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
CONSTANT_NAN - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
CONSTANT_NEGATIVE_INFINITY - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
CONSTANT_NEWLINE - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
CONSTANT_NULL - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
CONSTANT_PI - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
CONSTANT_POSITIVE_INFINITY - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
CONSTANT_TAU - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
CONSTANT_TRUE - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
ConstantSpotSegmentation3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.segmentation
 
ConstantSpotSegmentation3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.ConstantSpotSegmentation3DAlgorithm
 
ConstantSpotSegmentation3DAlgorithm(ConstantSpotSegmentation3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.ConstantSpotSegmentation3DAlgorithm
 
containingCollection(Class<? extends JIPipeParameterCollection>) - Static method in class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionList
Creates an instance from a template collection class.
containingSingle(Class<?>) - Static method in class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionList
Creates an instance that contains a parameter of a specific value
contains(Object) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
contains(Object) - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
containsAll(Collection<?>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
containsAll(Collection<?>) - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
containsColumn(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
 
containsColumn(String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Returns true if the column exists
containsKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Returns true if there is a parameter with given key
containsNode(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns true if this graph contains the algorithm
containsNode(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns true if the slot is in this graph
containsNode(UUID) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
containsOnlyRoisOfType(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Returns if this ROI list only contains ROI of given type
ContainsOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
Operator that tests if the left string is contained in the right string
ContainsOperator(int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.ContainsOperator
 
ContainsOperator2 - Class in org.hkijena.jipipe.extensions.expressions.operators
Operator that tests if the left string is contained in the right string
ContainsOperator2(int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.ContainsOperator2
 
ContainsStringPredicateFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
ContainsStringPredicateFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.ContainsStringPredicateFunction
 
contentAdded(Content) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
contentChanged(Content) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
contentRemoved(Content) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
contentSelected(Content) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
context() - Method in class org.hkijena.jipipe.ui.components.SplashScreen
 
context() - Method in class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
 
context() - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
ContinueOnFailureSettings() - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.ContinueOnFailureSettings
 
ContinueOnFailureSettings(JIPipeRuntimePartition.ContinueOnFailureSettings) - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.ContinueOnFailureSettings
 
Contrast(ImageProcessor, int, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm
 
ContrastEnhancerSettings() - Constructor for class org.hkijena.jipipe.extensions.clij2.CLIJSettings.ContrastEnhancerSettings
 
ContrastLocalAutoThreshold2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local
Segmenter node that thresholds via an auto threshold Based on code from Auto_Local_Threshold
ContrastLocalAutoThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm
 
ContrastLocalAutoThreshold2DAlgorithm(ContrastLocalAutoThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm
Copies the algorithm
CONTROL_HIGHLIGHTED - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
CONTROL_STYLE_CHECKBOX - Static variable in class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
 
CONTROL_STYLE_LIST - Static variable in class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
 
CONTROL_STYLE_PANEL - Static variable in class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
 
CONTROL_TEXT_COLOR - Static variable in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
 
CONTROL_TEXT_COLOR - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
CONTROL_TOGGLED - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
convert(JIPipeData, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.data.JIPipeDataConverter
Converts the supported input type to the output type
convert(Class<? extends JIPipeData>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Converts this data table in-place and sets the accepted data type
convert(JIPipeData, Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Converts the input data to the output data type
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ImplicitResultsTableDataConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageToImagePlusDataConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.ImagePlusDataToCLIJImageDataConverter
 
convert(Object) - Method in class org.hkijena.jipipe.extensions.expressions.functions.convert.ToBooleanFunction
 
convert(Object) - Method in class org.hkijena.jipipe.extensions.expressions.functions.convert.ToIntegerFunction
 
convert(Object) - Method in class org.hkijena.jipipe.extensions.expressions.functions.convert.ToNumber2Function
 
convert(Object) - Method in class org.hkijena.jipipe.extensions.expressions.functions.convert.ToNumberFunction
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImplicitPathTypeConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.FilamentsToRoi3dDataTypeConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.FilamentsToRoiDataTypeConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.SpotsToRoiConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.converters.ImageJ1ToImageJ2Converter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.converters.ImageJ2ToImageJ1Converter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePlusToOMEImageTypeConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImageToLUTTypeConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImplicitImageTypeConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.LUTToImageTypeConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.OMEImageToImagePlusTypeConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.OmeImageToOMEXMLTypeConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.OMEImageToROITypeConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.PlotToImageTypeConverter
 
convert(ImagePlus, ColorSpace, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.ColorSpace
Converts the image into the current color space
convert(int, ColorSpace) - Method in interface org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.ColorSpace
Converts a single pixel from its source image space into this one
convert(ImagePlus, ColorSpace, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.GreyscaleColorSpace
 
convert(int, ColorSpace) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.GreyscaleColorSpace
 
convert(ImagePlus, ColorSpace, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.HSBColorSpace
 
convert(int, ColorSpace) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.HSBColorSpace
 
convert(ImagePlus, ColorSpace, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.IgnoreColorSpace
 
convert(int, ColorSpace) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.IgnoreColorSpace
 
convert(ImagePlus, ColorSpace, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.LABColorSpace
 
convert(int, ColorSpace) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.LABColorSpace
 
convert(ImagePlus, ColorSpace, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.RGBColorSpace
 
convert(int, ColorSpace) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.RGBColorSpace
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImageJImageToImpImageDataTypeConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageToImageJImageDataTypeConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.multiparameters.converters.ParametersDataToResultsTableDataConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.plots.converters.PlotToTableConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.StringDataConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.DoubleArrayColumnToTableConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.StringArrayColumnToTableConverter
 
convert(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.datatypes.PathDataToJIPipeOutputConverter
 
convert3ChannelToRGBIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an ImagePlus to the color space of this data.
convertAlphaToCheckerboard(Image, int) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils
 
convertAlphaToCheckerboard(Image, int, Color, Color) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils
 
ConvertAnnotationTableToAnnotatedTables - Class in org.hkijena.jipipe.extensions.tables.nodes.annotations
Algorithm that integrates columns
ConvertAnnotationTableToAnnotatedTables(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.annotations.ConvertAnnotationTableToAnnotatedTables
Creates a new instance
ConvertAnnotationTableToAnnotatedTables(ConvertAnnotationTableToAnnotatedTables) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.annotations.ConvertAnnotationTableToAnnotatedTables
Creates a copy
ConvertColumnsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.columns
Algorithm that integrates columns
ConvertColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.ConvertColumnsAlgorithm
Creates a new instance
ConvertColumnsAlgorithm(ConvertColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.ConvertColumnsAlgorithm
Creates a copy
ConvertDataToOutputPath - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Applies subfolder navigation to each input folder
ConvertDataToOutputPath(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ConvertDataToOutputPath
 
ConvertDataToOutputPath(ConvertDataToOutputPath) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ConvertDataToOutputPath
Copies the algorithm
convertDisplayOperationsToImportOperations() - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Converts all registered JIPipeDataDisplayOperation entries into JIPipeDataImportOperation
ConverterAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms
Algorithm that converts any type to any other type
ConverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.ConverterAlgorithm
 
ConverterAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.ConverterAlgorithm
 
ConvertFilamentsTo3DMeshAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.convert
 
ConvertFilamentsTo3DMeshAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
ConvertFilamentsTo3DMeshAlgorithm(ConvertFilamentsTo3DMeshAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
ConvertFilamentsToLabelsAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.convert
 
ConvertFilamentsToLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm
 
ConvertFilamentsToLabelsAlgorithm(ConvertFilamentsToLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm
 
ConvertFilamentsToMaskAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.convert
 
ConvertFilamentsToMaskAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm
 
ConvertFilamentsToMaskAlgorithm(ConvertFilamentsToMaskAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm
 
ConvertFilamentsToRGBAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.convert
 
ConvertFilamentsToRGBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRGBAlgorithm
 
ConvertFilamentsToRGBAlgorithm(ConvertFilamentsToRGBAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRGBAlgorithm
 
ConvertFilamentsToRoi3DAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.convert
 
ConvertFilamentsToRoi3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm
 
ConvertFilamentsToRoi3DAlgorithm(ConvertFilamentsToRoi3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm
 
ConvertFilamentsToRoiAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.convert
 
ConvertFilamentsToRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm
 
ConvertFilamentsToRoiAlgorithm(ConvertFilamentsToRoiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm
 
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorHSBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorLABData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorRGBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorHSBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorLABData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorRGBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale16UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale32FData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale8UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleMaskData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.ImagePlus2DData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorHSBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorLABData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorRGBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale16UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale32FData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale8UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleMaskData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.ImagePlus3DData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorHSBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorLABData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorRGBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale16UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale32FData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale8UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleMaskData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.ImagePlus4DData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorHSBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorLABData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorRGBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale16UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale32FData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale8UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleMaskData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.ImagePlus5DData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFT2DData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFT3DData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFT4DData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFT5DData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFTData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale16UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale32FData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale8UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleMaskData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
Converts the incoming image data into the current format.
convertFromJIPipeToModule(IntegerList) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.ByteArrayParameterImageJ2ModuleInput
 
convertFromJIPipeToModule(DoubleList) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.DoubleArrayParameterImageJ2ModuleInput
 
convertFromJIPipeToModule(DoubleList) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.FloatArrayParameterImageJ2ModuleInput
 
convertFromJIPipeToModule(IntegerList) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.IntegerArrayParameterImageJ2ModuleInput
 
convertFromJIPipeToModule(LongList) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.LongArrayParameterImageJ2ModuleInput
 
convertFromJIPipeToModule(IntegerList) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.ShortArrayParameterImageJ2ModuleInput
 
convertFromJIPipeToModule(StringList) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.StringArrayParameterImageJ2ModuleInput
 
convertFromJIPipeToModule(JIPipeType) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.ParameterImageJ2ModuleInput
 
convertFromJIPipeToModule(Boolean) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.BooleanParameterImageJ2ModuleInput
 
convertFromJIPipeToModule(Byte) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.ByteParameterImageJ2ModuleInput
 
convertFromJIPipeToModule(Double) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.DoubleParameterImageJ2ModuleInput
 
convertFromJIPipeToModule(Float) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.FloatParameterImageJ2ModuleInput
 
convertFromJIPipeToModule(Integer) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.IntegerParameterImageJ2ModuleInput
 
convertFromJIPipeToModule(Long) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.LongParameterImageJ2ModuleInput
 
convertFromJIPipeToModule(Short) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.ShortParameterImageJ2ModuleInput
 
convertFromJIPipeToModule(String) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.StringParameterImageJ2ModuleInput
 
convertFromJIPipeToModule(Double) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.RealTypeParameterImageJ2ModuleInput
 
convertFromJIPipeToModule(JIPipeType) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput
 
convertFromJIPipeToModule(Boolean) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.BooleanParameterImageJ2ModuleOutput
 
convertFromJIPipeToModule(Byte) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.ByteParameterImageJ2ModuleOutput
 
convertFromJIPipeToModule(Double) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.DoubleParameterImageJ2ModuleOutput
 
convertFromJIPipeToModule(Float) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.FloatParameterImageJ2ModuleOutput
 
convertFromJIPipeToModule(Integer) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.IntegerParameterImageJ2ModuleOutput
 
convertFromJIPipeToModule(Long) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.LongParameterImageJ2ModuleOutput
 
convertFromJIPipeToModule(Short) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.ShortParameterImageJ2ModuleOutput
 
convertFromJIPipeToModule(String) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.StringParameterImageJ2ModuleOutput
 
convertFromJIPipeToModule(Double) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.RealTypeParameterImageJ2ModuleOutput
 
convertFromModuleToJIPipe(byte[]) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.ByteArrayParameterImageJ2ModuleInput
 
convertFromModuleToJIPipe(double[]) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.DoubleArrayParameterImageJ2ModuleInput
 
convertFromModuleToJIPipe(float[]) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.FloatArrayParameterImageJ2ModuleInput
 
convertFromModuleToJIPipe(int[]) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.IntegerArrayParameterImageJ2ModuleInput
 
convertFromModuleToJIPipe(long[]) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.LongArrayParameterImageJ2ModuleInput
 
convertFromModuleToJIPipe(short[]) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.ShortArrayParameterImageJ2ModuleInput
 
convertFromModuleToJIPipe(String[]) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.StringArrayParameterImageJ2ModuleInput
 
convertFromModuleToJIPipe(ModuleType) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.ParameterImageJ2ModuleInput
 
convertFromModuleToJIPipe(Boolean) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.BooleanParameterImageJ2ModuleInput
 
convertFromModuleToJIPipe(Byte) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.ByteParameterImageJ2ModuleInput
 
convertFromModuleToJIPipe(Double) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.DoubleParameterImageJ2ModuleInput
 
convertFromModuleToJIPipe(Float) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.FloatParameterImageJ2ModuleInput
 
convertFromModuleToJIPipe(Integer) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.IntegerParameterImageJ2ModuleInput
 
convertFromModuleToJIPipe(Long) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.LongParameterImageJ2ModuleInput
 
convertFromModuleToJIPipe(Short) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.ShortParameterImageJ2ModuleInput
 
convertFromModuleToJIPipe(String) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.StringParameterImageJ2ModuleInput
 
convertFromModuleToJIPipe(RealType) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.RealTypeParameterImageJ2ModuleInput
 
convertFromModuleToJIPipe(ModuleType) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput
 
convertFromModuleToJIPipe(Boolean) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.BooleanParameterImageJ2ModuleOutput
 
convertFromModuleToJIPipe(Byte) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.ByteParameterImageJ2ModuleOutput
 
convertFromModuleToJIPipe(Double) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.DoubleParameterImageJ2ModuleOutput
 
convertFromModuleToJIPipe(Float) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.FloatParameterImageJ2ModuleOutput
 
convertFromModuleToJIPipe(Integer) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.IntegerParameterImageJ2ModuleOutput
 
convertFromModuleToJIPipe(Long) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.LongParameterImageJ2ModuleOutput
 
convertFromModuleToJIPipe(Short) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.ShortParameterImageJ2ModuleOutput
 
convertFromModuleToJIPipe(String) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.StringParameterImageJ2ModuleOutput
 
convertFromModuleToJIPipe(RealType) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.RealTypeParameterImageJ2ModuleOutput
 
convertGlobToRegex(String) - Static method in class org.hkijena.jipipe.utils.StringUtils
Converts a standard POSIX Shell globbing pattern into a regular expression pattern.
convertHSBToRGB(ImagePlus, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an HSB image to RGB (re-using the same components)
ConvertImageAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert
 
ConvertImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageAlgorithm
 
ConvertImageAlgorithm(ConvertImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageAlgorithm
 
ConvertImageTo16BitAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert
 
ConvertImageTo16BitAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageTo16BitAlgorithm
 
ConvertImageTo16BitAlgorithm(ConvertImageTo16BitAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageTo16BitAlgorithm
 
ConvertImageTo32BitAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert
 
ConvertImageTo32BitAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageTo32BitAlgorithm
 
ConvertImageTo32BitAlgorithm(ConvertImageTo32BitAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageTo32BitAlgorithm
 
ConvertImageTo8BitAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert
 
ConvertImageTo8BitAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageTo8BitAlgorithm
 
ConvertImageTo8BitAlgorithm(ConvertImageTo8BitAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageTo8BitAlgorithm
 
ConvertImageToHSBAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert
 
ConvertImageToHSBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageToHSBAlgorithm
 
ConvertImageToHSBAlgorithm(ConvertImageToHSBAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageToHSBAlgorithm
 
ConvertImageToLABAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert
 
ConvertImageToLABAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageToLABAlgorithm
 
ConvertImageToLABAlgorithm(ConvertImageToLABAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageToLABAlgorithm
 
ConvertImageToRGBAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert
 
ConvertImageToRGBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageToRGBAlgorithm
 
ConvertImageToRGBAlgorithm(ConvertImageToRGBAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageToRGBAlgorithm
 
ConvertImpImageToImagePlusAlgorithm - Class in org.hkijena.jipipe.extensions.imp.nodes
 
ConvertImpImageToImagePlusAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imp.nodes.ConvertImpImageToImagePlusAlgorithm
 
ConvertImpImageToImagePlusAlgorithm(ConvertImpImageToImagePlusAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imp.nodes.ConvertImpImageToImagePlusAlgorithm
 
ConvertingColumnOperation - Interface in org.hkijena.jipipe.extensions.tables
A column operation that returns an output that has the same size as the input
ConvertingTableColumnProcessorParameter - Class in org.hkijena.jipipe.extensions.tables.parameters.processors
A parameter that models processing an input column via an conversion function and generating an output column
ConvertingTableColumnProcessorParameter() - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.processors.ConvertingTableColumnProcessorParameter
 
ConvertingTableColumnProcessorParameter(ConvertingTableColumnProcessorParameter) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.processors.ConvertingTableColumnProcessorParameter
 
ConvertingTableColumnProcessorParameterList - Class in org.hkijena.jipipe.extensions.tables.parameters.collections
 
ConvertingTableColumnProcessorParameterList() - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.collections.ConvertingTableColumnProcessorParameterList
Creates a new instance
ConvertingTableColumnProcessorParameterList(ConvertingTableColumnProcessorParameterList) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.collections.ConvertingTableColumnProcessorParameterList
Creates a copy
convertJIPipeToModuleData(ImageJ2DatasetData) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.DatasetImageJ2ModuleInput
 
convertJIPipeToModuleData(JIPipeDataType) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.DataSlotModuleInput
 
convertJIPipeToModuleData(ImagePlusData) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.ImagePlusImageJ2ModuleInput
 
convertJIPipeToModuleData(ImageJ2DatasetData) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.IntervalImageJ2ModuleInput
 
convertJIPipeToModuleData(ImageJ2DatasetData) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.IterableImageJ2ModuleInput
 
convertJIPipeToModuleData(ImageJ2OutOfBoundsFactoryData) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.OutOfBoundsFactoryImageJ2ModuleInput
 
convertJIPipeToModuleData(ImageJ2DatasetData) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.RandomAccessibleImageJ2ModuleInput
 
convertJIPipeToModuleData(ImageJ2ShapeData) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.ShapeImageJ2ModuleInput
 
convertJIPipeToModuleData(ImageJ2DatasetData) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.DatasetImageJ2ModuleOutput
 
convertJIPipeToModuleData(JIPipeDataType) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.DataSlotModuleOutput
 
convertJIPipeToModuleData(ImagePlusData) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.ImagePlusImageJ2ModuleOutput
 
convertJIPipeToModuleData(ImageJ2DatasetData) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.IntervalImageJ2ModuleOutput
 
convertJIPipeToModuleData(ImageJ2DatasetData) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.RandomAccessibleImageJ2ModuleOutput
 
convertLABToRGB(ImagePlus, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an LAB image to RGB L is stored unsigned (0-255) A is stored signed (-128-127) B is stored signed (-128-127)
convertMergingToSingleDataBatches(List<JIPipeMultiIterationStep>) - Static method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
Builds a single data batch where each slot only can have one row
convertModuleToJIPipeData(Dataset) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.DatasetImageJ2ModuleInput
 
convertModuleToJIPipeData(ModuleDataType) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.DataSlotModuleInput
 
convertModuleToJIPipeData(ImagePlus) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.ImagePlusImageJ2ModuleInput
 
convertModuleToJIPipeData(Interval) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.IntervalImageJ2ModuleInput
 
convertModuleToJIPipeData(Iterable) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.IterableImageJ2ModuleInput
 
convertModuleToJIPipeData(OutOfBoundsFactory) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.OutOfBoundsFactoryImageJ2ModuleInput
 
convertModuleToJIPipeData(RandomAccessible) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.RandomAccessibleImageJ2ModuleInput
 
convertModuleToJIPipeData(Shape) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.ShapeImageJ2ModuleInput
 
convertModuleToJIPipeData(Dataset) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.DatasetImageJ2ModuleOutput
 
convertModuleToJIPipeData(ModuleDataType) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.DataSlotModuleOutput
 
convertModuleToJIPipeData(ImagePlus) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.ImagePlusImageJ2ModuleOutput
 
convertModuleToJIPipeData(Interval) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.IntervalImageJ2ModuleOutput
 
convertModuleToJIPipeData(RandomAccessible) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.RandomAccessibleImageJ2ModuleOutput
 
ConvertParametersToTableAlgorithm - Class in org.hkijena.jipipe.extensions.multiparameters.nodes
 
ConvertParametersToTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.ConvertParametersToTableAlgorithm
 
ConvertParametersToTableAlgorithm(ConvertParametersToTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.ConvertParametersToTableAlgorithm
 
convertPathsToAbsolute() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileListDataSource
 
convertPathsToAbsolute() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderListDataSource
 
convertPathsToAbsolute() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathListDataSource
 
convertPathsToRelative() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileListDataSource
 
convertPathsToRelative() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderListDataSource
 
convertPathsToRelative() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathListDataSource
 
convertRGBToHSB(ImagePlus, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an RGB image to HSB (re-using the same components)
convertRGBToLAB(ImagePlus, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an RGB image to LAB L is stored unsigned (0-255) A is stored signed (-128-127) B is stored signed (-128-127)
ConvertSpotsToRoiNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters
 
ConvertSpotsToRoiNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode
 
ConvertSpotsToRoiNode(ConvertSpotsToRoiNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode
 
convertTo(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 
ConvertToAnnotationTable - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Removes a specified annotation
ConvertToAnnotationTable(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.ConvertToAnnotationTable
 
ConvertToAnnotationTable(ConvertToAnnotationTable) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.ConvertToAnnotationTable
Copies the algorithm
convertToBitDepthIfNeeded(ImagePlus, int) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
convertToColorHSBIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an ImagePlus to the color space of this data.
convertToColorLABIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an ImagePlus to the color space of this data.
convertToColorRGBIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an ImagePlus to the color space of this data.
convertToConsensusBitDepthIfNeeded(Collection<ImagePlus>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
ConvertToExportedPath - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
 
ConvertToExportedPath(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ConvertToExportedPath
 
ConvertToExportedPath(ConvertToExportedPath) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ConvertToExportedPath
 
convertToGrayscale16UIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an ImagePlus to the color space of this data.
convertToGrayscale32FIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an ImagePlus to the color space of this data.
convertToGreyscale8UIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an ImagePlus to the color space of this data.
convertToGreyscaleIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an ImagePlus to the color space of this data.
convertToNumericColumn(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Converts the column into a numeric column.
convertToPixels(Quantity) - Method in class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 
convertToRGB(ImagePlus, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.ColorSpace
Converts the color image into RGB (in-place)
convertToRGB(int) - Method in interface org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.ColorSpace
Converts a single pixel from its source image space into RGB
convertToRGB(ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.GreyscaleColorSpace
 
convertToRGB(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.GreyscaleColorSpace
 
convertToRGB(ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.HSBColorSpace
 
convertToRGB(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.HSBColorSpace
 
convertToRGB(ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.IgnoreColorSpace
 
convertToRGB(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.IgnoreColorSpace
 
convertToRGB(ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.LABColorSpace
 
convertToRGB(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.LABColorSpace
 
convertToRGB(ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.RGBColorSpace
 
convertToRGB(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.RGBColorSpace
 
convertToSameTypeIfNeeded(ImagePlus, ImagePlus, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts this image to the same type as the other one if needed
convertToStringColumn(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Converts the column into a string column.
ConvertTracksToRoiNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters
 
ConvertTracksToRoiNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertTracksToRoiNode
 
ConvertTracksToRoiNode(ConvertTracksToRoiNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertTracksToRoiNode
 
ConvexifyAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary
 
ConvexifyAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConvexifyAlgorithm
Instantiates a new node type.
ConvexifyAlgorithm(ConvexifyAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConvexifyAlgorithm
Instantiates a new node type.
ConvolveByImage2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve
Wrapper around Convolver
ConvolveByImage2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve.ConvolveByImage2DAlgorithm
Instantiates a new node type.
ConvolveByImage2DAlgorithm(ConvolveByImage2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve.ConvolveByImage2DAlgorithm
Creates a copy
ConvolveByParameter2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve
Wrapper around Convolver
ConvolveByParameter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve.ConvolveByParameter2DAlgorithm
Instantiates a new node type.
ConvolveByParameter2DAlgorithm(ConvolveByParameter2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve.ConvolveByParameter2DAlgorithm
Creates a copy
convolveSlice(Convolver, int, int, float[], ImageProcessor) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
copyBufferedImage(BufferedImage) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils
copyBufferedImageToARGB(BufferedImage) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils
copyBufferedImageToGray(BufferedImage) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils
 
copyBufferedImageToRGB(BufferedImage) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils
copyColumnSchemaFrom(ResultsTableData) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds missing columns from the other table
CopyContainingFolderDataImportOperation - Class in org.hkijena.jipipe.extensions.core.data
Import operation that copies the containing folder path into the clipboard.
CopyContainingFolderDataImportOperation() - Constructor for class org.hkijena.jipipe.extensions.core.data.CopyContainingFolderDataImportOperation
 
copyCurrentSliceToClipboard() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
copyDirectory(Path, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.PathUtils
 
copyFrom(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
Copies the properties to another node template
copyFrom(FilamentsDrawer) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
copyFrom(SpotDrawer) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer
 
copyFrom(TrackDrawer) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
copyFrom(RoiDrawer) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
copyFrom(Image3DRendererSettings) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.Image3DRendererSettings
 
copyFrom(JIPipeDataByMetadataExporter) - Method in class org.hkijena.jipipe.extensions.settings.DataExporterSettings
Copies parameters into the settings storage
copyHyperstackDimensions(ImagePlus, ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Copies the hyperstack dimensions from one image to another src and target must have the same number of slices!
copyImage(BufferedImage) - Method in class org.hkijena.jipipe.utils.ui.CopyImageToClipboard
 
CopyImageToClipboard - Class in org.hkijena.jipipe.utils.ui
 
CopyImageToClipboard() - Constructor for class org.hkijena.jipipe.utils.ui.CopyImageToClipboard
 
copyMetadata(JIPipeDataSlotInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
Copies additional parameters such as custom names from the other slot
copyMetadata(ROI3D) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
copyMetadata(ImagePlusData) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
copyMetadataFrom(Scene3DNode) - Method in interface org.hkijena.jipipe.extensions.scene3d.model.Scene3DGeometry
 
copyMetadataFrom(Scene3DNode) - Method in interface org.hkijena.jipipe.extensions.scene3d.model.Scene3DNode
Copies metadata from another node
CopyNFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
CopyNFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.CopyNFunction
 
copyOrLink(Path, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.PathUtils
 
CopyPath - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Applies subfolder navigation to each input folder
CopyPath(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.CopyPath
 
CopyPath(CopyPath) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.CopyPath
Copies the algorithm
CopyPathDataOperation - Class in org.hkijena.jipipe.extensions.filesystem.resultanalysis
 
CopyPathDataOperation() - Constructor for class org.hkijena.jipipe.extensions.filesystem.resultanalysis.CopyPathDataOperation
 
CopyPhysicalDimensionsBetweenImagesAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration
 
CopyPhysicalDimensionsBetweenImagesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.CopyPhysicalDimensionsBetweenImagesAlgorithm
 
CopyPhysicalDimensionsBetweenImagesAlgorithm(CopyPhysicalDimensionsBetweenImagesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.CopyPhysicalDimensionsBetweenImagesAlgorithm
 
copyPixelsBetweenImages(ImagePlus, ImagePlus, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Copies all data from the source to the target image
copySlotConfiguration(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Copies the slot configuration from the other algorithm to this algorithm Override this method for special configuration cases
copyTo(ImageJExportParameters) - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters
 
copyTo(ImageJImportParameters) - Method in class org.hkijena.jipipe.api.compat.ImageJImportParameters
 
copyTo(JIPipeDynamicParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Copies the parameter configuration into the target
copyToClipboard(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Copies the string to the clipboard
CoreImageJUtils - Class in org.hkijena.jipipe.utils
 
CoreImageJUtils() - Constructor for class org.hkijena.jipipe.utils.CoreImageJUtils
 
CorePlugin - Class in org.hkijena.jipipe.extensions.core
The core extension
CorePlugin() - Constructor for class org.hkijena.jipipe.extensions.core.CorePlugin
 
CosineColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a sine function
CosineColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.CosineColumnOperation
 
CounterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm.CounterVariablesInfo
 
CountROIAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure
 
CountROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.CountROIAlgorithm
 
CountROIAlgorithm(CountROIAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.CountROIAlgorithm
 
countRoisOfType(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Counts all ROIs of given type
CrasherAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps
 
CrasherAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.CrasherAlgorithm
 
CrasherAlgorithm(CrasherAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.CrasherAlgorithm
 
create(String, JIPipeDataContext...) - Static method in interface org.hkijena.jipipe.api.data.context.JIPipeDataContext
Creates a new data context
create(JIPipeGraphNode, JIPipeDataContext...) - Static method in interface org.hkijena.jipipe.api.data.context.JIPipeDataContext
Creates a new data context
create(JIPipeGraphCanvasUI, Set<JIPipeGraphNode>) - Static method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
create() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeInputSlot
 
create() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeOutputSlot
 
createAndConfigureNode(Point, Point) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
createAndConfigureNode(Point, Point) - Method in class org.hkijena.jipipe.extensions.graphannotation.tools.ArrowAnnotationGraphNodeTool
 
createAndConfigureNode(Point, Point) - Method in class org.hkijena.jipipe.extensions.graphannotation.tools.GroupBoxAnnotationGraphNodeTool
 
createAndConfigureNode(Point, Point) - Method in class org.hkijena.jipipe.extensions.graphannotation.tools.ImageBoxAnnotationGraphNodeTool
 
createAndConfigureNode(Point, Point) - Method in class org.hkijena.jipipe.extensions.graphannotation.tools.TextBoxAnnotationGraphNodeTool
 
createAnnotation(JIPipeData) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalDataAnnotationNameParameter
Creates a new annotation with the defined name and value
createAnnotation(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter
Creates a new annotation with the defined name and value
createAnnotation(String[]) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter
Creates a new annotation with the defined name and value
createAnnotation(Collection<String>) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter
Creates a new annotation with the defined name and value
createAnnotations(List<JIPipeTextAnnotation>, MetadataFacility, SecurityContext, DataObject) - Method in class org.hkijena.jipipe.extensions.omero.parameters.OMEROKeyValuePairToAnnotationImporter
 
createAnnotations(List<JIPipeTextAnnotation>, MetadataFacility, SecurityContext, DataObject) - Method in class org.hkijena.jipipe.extensions.omero.parameters.OMEROTagToAnnotationImporter
 
CreateArrayFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
CreateArrayFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.CreateArrayFunction
 
createAuthorPanel(Component, Collection<JIPipeAuthorMetadata>, Icon) - Static method in class org.hkijena.jipipe.ui.extensions.ExtensionInfoPanel
 
createAuthorPanel(Component, JIPipeAuthorMetadata.List, Icon, String) - Static method in class org.hkijena.jipipe.ui.extensions.ExtensionItemPanel
 
createBalloonHelpButton(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
createBlankCanvas(String, BitDepth) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
createBlankCanvas(String, int) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
createBlankCanvas(String, BitDepth) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
createBlankCanvas(String, int) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
createBlankCanvas(String, BitDepth) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
 
createBlankCanvas(String, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
 
createButton(String, Icon, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
createCondaEnvironment(SelectCondaEnvPythonInstaller.Configuration) - Static method in class org.hkijena.jipipe.extensions.python.installers.SelectCondaEnvPythonInstaller
 
createContextual(DeserializationContext, BeanProperty) - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameter.Deserializer
 
createContextual(DeserializationContext, BeanProperty) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter.Deserializer
 
createContextual(DeserializationContext, BeanProperty) - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D.Deserializer
 
createContextual(DeserializationContext, BeanProperty) - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameter.Deserializer
 
createContextual(DeserializationContext, BeanProperty) - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameter.Deserializer
 
createControlBorder() - Static method in class org.hkijena.jipipe.utils.UIUtils
 
createControlErrorBorder() - Static method in class org.hkijena.jipipe.utils.UIUtils
 
createData(Class<T>, Object...) - Static method in class org.hkijena.jipipe.JIPipe
Instantiates a data class with the provided parameters This method is helpful if output data is constructed based on slot types
createDataSet() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.BoxAndWhiskerCategoryPlotData
 
createDataSet() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CategoryPlotData
Creates a data set from the current series
createDataSet() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PiePlotData
Creates a data set from the current series
createDataSet() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.StatisticalCategoryPlotData
 
createDataSet() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
Creates a data set from the current series
createDecreaseButton(int) - Method in class org.hkijena.jipipe.ui.theme.ArrowLessScrollBarUI
 
createDesktopImage() - Static method in class org.hkijena.jipipe.utils.ui.ScreenImage
Convenience method to create a BufferedImage of the desktop
createDialog(Component) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
CreateDirectory - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Applies subfolder navigation to each input folder
CreateDirectory(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.CreateDirectory
 
CreateDirectory(CreateDirectory) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.CreateDirectory
Copies the algorithm
createDisplaySettings(SpotsCollectionData) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer
 
createDisplaySettings(TrackCollectionData) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
createDocumentation(String, String) - Static method in class org.hkijena.jipipe.utils.DocumentationUtils
 
createDocumentation(String, String, Class<?>) - Static method in class org.hkijena.jipipe.utils.DocumentationUtils
 
createDummyImage() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Creates a 2D 8-bit image that covers the region of all ROI
createDummyImageFor(Collection<ROIListData>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Creates a 2D 8-bit black image that covers the region of all provided ROI
createEditorFor(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry
Creates editor for the parameter
createEntryPropertiesComponent(Component, Component, int, MarkdownDocument) - Method in class org.hkijena.jipipe.ui.components.FormPanel
 
createEntryPropertiesComponent(Component, Component, int, MarkdownDocument) - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
createExporter(JIPipeProjectWorkbench, NodeGroup, String, HTMLText) - Static method in class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExporter
Creates a new exporter tab
createFactory() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.BorderImageJ2OutOfBoundsFactoryData
 
createFactory() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.ByteConstantValueImageJ2OutOfBoundsFactoryData
 
createFactory() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.DoubleConstantValueImageJ2OutOfBoundsFactoryData
 
createFactory() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.FloatConstantValueImageJ2OutOfBoundsFactoryData
 
createFactory() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.IntegerConstantValueImageJ2OutOfBoundsFactoryData
 
createFactory() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.LongConstantValueImageJ2OutOfBoundsFactoryData
 
createFactory() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.ShortConstantValueImageJ2OutOfBoundsFactoryData
 
createFactory() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.EmptyImageJ2OutOfBoundsFactory
 
createFactory() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.ImageJ2OutOfBoundsFactoryData
 
createFactory() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.MirrorImageJ2OutOfBoundsFactoryData
 
createFactory() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.PeriodicImageJ2OutOfBoundsFactoryData
 
createFlatButton(String, Icon, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
createGradientLUT(Color, Color) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm
 
createGrayscaleLUTFromGradient(List<ColorUtils.GradientStop>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
CreateHSBColorFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.color
 
CreateHSBColorFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.color.CreateHSBColorFunction
 
createIconTextHTMLTable(String, URL) - Static method in class org.hkijena.jipipe.utils.StringUtils
Creates an HTML table with an icon and text.
createIconTextHTMLTableElement(String, URL) - Static method in class org.hkijena.jipipe.utils.StringUtils
Creates an HTML table with an icon and text.
CreateIJ2OutOfBoundsFactoryAlgorithm - Class in org.hkijena.jipipe.extensions.imagej2.algorithms
 
CreateIJ2OutOfBoundsFactoryAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagej2.algorithms.CreateIJ2OutOfBoundsFactoryAlgorithm
 
CreateIJ2OutOfBoundsFactoryAlgorithm(CreateIJ2OutOfBoundsFactoryAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagej2.algorithms.CreateIJ2OutOfBoundsFactoryAlgorithm
 
CreateIJ2ShapeAlgorithm - Class in org.hkijena.jipipe.extensions.imagej2.algorithms
 
CreateIJ2ShapeAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagej2.algorithms.CreateIJ2ShapeAlgorithm
 
CreateIJ2ShapeAlgorithm(CreateIJ2ShapeAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagej2.algorithms.CreateIJ2ShapeAlgorithm
 
createImage(JComponent) - Static method in class org.hkijena.jipipe.utils.ui.ScreenImage
Create a BufferedImage for Swing components.
createImage(JComponent, Rectangle) - Static method in class org.hkijena.jipipe.utils.ui.ScreenImage
Create a BufferedImage for Swing components.
createImage(Component) - Static method in class org.hkijena.jipipe.utils.ui.ScreenImage
Create a BufferedImage for AWT components.
createImage(Rectangle) - Static method in class org.hkijena.jipipe.utils.ui.ScreenImage
Create a BufferedImage from a rectangular region on the screen.
createImage(JComponent) - Static method in class org.hkijena.jipipe.utils.ui.ScreenImageSVG
Create a BufferedImage for Swing components.
createImage(JComponent, Rectangle) - Static method in class org.hkijena.jipipe.utils.ui.ScreenImageSVG
Create a BufferedImage for Swing components.
createIncreaseButton(int) - Method in class org.hkijena.jipipe.ui.theme.ArrowLessScrollBarUI
 
createInfoLabel(String, String) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
createInfoLabel(String, String, Icon) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
createInstance(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
createInstance(Context) - Static method in class org.hkijena.jipipe.JIPipe
Helper to create JIPipe from a context.
createJLabel(String, Icon) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
createJLabel(String, int) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
createJLabel(String, Icon, int) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
createKeyValuePairs(Map<String, String>, Collection<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.omero.parameters.AnnotationsToOMEROKeyValuePairExporter
 
CreateLABColorFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.color
 
CreateLABColorFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.color.CreateLABColorFunction
 
createLabel(Roi, int) - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiLabel
Generates a string label based on the ROI
CreateLaunchersTool - Class in org.hkijena.jipipe.extensions.tools
 
CreateLaunchersTool(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.tools.CreateLaunchersTool
Creates a new instance
createLayoutManager() - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
createLeftAlignedButton(String, ImageIcon, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
createLibNoImageJInstance(List<Class<? extends JIPipeJavaPlugin>>) - Static method in class org.hkijena.jipipe.JIPipe
Create a new JIPipe using initializeLibNoImageJ, which is suitable for using limited functions from within non-ImageJ applications.
createLine(int, int, int, int, int, int, float, int, int) - Method in class org.hkijena.jipipe.extensions.ij3d.utils.ExtendedObjectCreator3D
 
CreateLineMeshAlgorithm - Class in org.hkijena.jipipe.extensions.scene3d.nodes
 
CreateLineMeshAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.scene3d.nodes.CreateLineMeshAlgorithm
 
CreateLineMeshAlgorithm(CreateLineMeshAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.scene3d.nodes.CreateLineMeshAlgorithm
 
createLUTFromGradient(List<ColorUtils.GradientStop>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
CreateMapFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
CreateMapFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.CreateMapFunction
 
createMenuItem(String, String, Icon, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
createMenuTree(JMenu, Set<String>) - Static method in class org.hkijena.jipipe.utils.UIUtils
Creates a hierarchy of menus based on the menu paths vector
createMissingIlastikNotificationIfNeeded(JIPipeNotificationInbox) - Static method in class org.hkijena.jipipe.extensions.ilastik.IlastikPlugin
 
createMissingLibJIPipePythonNotificationIfNeeded(JIPipeNotificationInbox) - Static method in class org.hkijena.jipipe.extensions.python.PythonPlugin
 
createMissingPythonNotificationIfNeeded(JIPipeNotificationInbox) - Static method in class org.hkijena.jipipe.extensions.cellpose.CellposePlugin
 
createMissingPythonNotificationIfNeeded(JIPipeNotificationInbox) - Static method in class org.hkijena.jipipe.extensions.omnipose.OmniposePlugin
 
createMissingPythonNotificationIfNeeded(JIPipeNotificationInbox) - Static method in class org.hkijena.jipipe.extensions.python.PythonPlugin
 
createMissingRNotificationIfNeeded(JIPipeNotificationInbox) - Static method in class org.hkijena.jipipe.extensions.r.RPlugin
 
createMontage(List<MontageCreator.InputEntry>, List<JIPipeTextAnnotation>, JIPipeExpressionVariablesMap, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
createNewContext() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Creates a context for new data that inherits direct predecessors from this data batch's input
createNewContext() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Creates a context for new data that inherits direct predecessors from this data batch's input
createNewEntry() - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
Creates a new entry
createNewEntry() - Method in class org.hkijena.jipipe.extensions.parameters.library.matrix.Matrix2DFloat
 
CreateNewNodeByExampleDatabaseEntry - Class in org.hkijena.jipipe.api.nodes.database
 
CreateNewNodeByExampleDatabaseEntry(String, JIPipeNodeExample) - Constructor for class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
CreateNewNodeByInfoDatabaseEntry - Class in org.hkijena.jipipe.api.nodes.database
 
CreateNewNodeByInfoDatabaseEntry(String, JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
createNextButton() - Method in class org.hkijena.jipipe.ui.theme.ModernSpinnerUI
 
createNode(String) - Static method in class org.hkijena.jipipe.JIPipe
Creates a new node instance from its id
createNode(Class<T>) - Static method in class org.hkijena.jipipe.JIPipe
Creates a new node instance from its class.
createOldLibJIPipePythonNotification(JIPipeNotificationInbox, String, String) - Static method in class org.hkijena.jipipe.extensions.python.PythonPlugin
 
createOptionsButton() - Method in class org.hkijena.jipipe.ui.data.MemoryOptionsControl
 
CreatePairArrayFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
CreatePairArrayFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.CreatePairArrayFunction
 
createParameters() - Static method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
createPopupHelpButton(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
createPreviousButton() - Method in class org.hkijena.jipipe.ui.theme.ModernSpinnerUI
 
CreateRGBColorFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.color
 
CreateRGBColorFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.color.CreateRGBColorFunction
 
createRightIconTextHTMLTable(String, URL) - Static method in class org.hkijena.jipipe.utils.StringUtils
Same as createIconTextHTMLTable but the icon is on the right side
createRightIconTextHTMLTableElement(String, URL) - Static method in class org.hkijena.jipipe.utils.StringUtils
Same as createIconTextHTMLTableElement but the icon is on the right side
createScaleBarOverlay() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator
Create and draw the scalebar using an Overlay.
createScreenshotClipboard() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
createScreenshotPNG() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Creates a screenshot of the whole graph compartment
createScreenshotSVG() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Creates a screenshot of the whole graph compartment
createSeriesTable() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
Generates an empty series table with the correct columns
createShape() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData
 
createShape() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.DiamondImageJ2ShapeData
 
createShape() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.DiamondTipsImageJ2ShapeData
 
createShape() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.EmptyImageJ2ShapeData
 
createShape() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData
 
createShape() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HyperSphereImageJ2ShapeData
 
createShape() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.ImageJ2ShapeData
 
createShape() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.PairOfPointsImageJ2ShapeData
 
createShape() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData
 
createShape() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.RectangleImageJ2ShapeData
 
createSingletonSlot(JIPipeData, JIPipeGraphNode) - Static method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
Creates a new input slot that contains only one data item
CreateSphereMeshAlgorithm - Class in org.hkijena.jipipe.extensions.scene3d.nodes
 
CreateSphereMeshAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.scene3d.nodes.CreateSphereMeshAlgorithm
 
CreateSphereMeshAlgorithm(CreateSphereMeshAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.scene3d.nodes.CreateSphereMeshAlgorithm
 
CreateSpotDetectorNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors
 
CreateSpotDetectorNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNode
 
CreateSpotDetectorNode(CreateSpotDetectorNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNode
 
CreateSpotDetectorNodeInfo - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors
 
CreateSpotDetectorNodeInfo(SpotDetectorFactory<?>) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo
 
CreateSpotTrackerNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors
 
CreateSpotTrackerNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNode
 
CreateSpotTrackerNode(CreateSpotTrackerNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNode
 
CreateSpotTrackerNodeInfo - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors
 
CreateSpotTrackerNodeInfo(SpotTrackerFactory) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo
 
CreateStackAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions
 
CreateStackAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.CreateStackAlgorithm
Instantiates a new node type.
CreateStackAlgorithm(CreateStackAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.CreateStackAlgorithm
Instantiates a new node type.
createStandardButton(String, ImageIcon, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
createStarRatingLabel(String, double, int) - Static method in class org.hkijena.jipipe.utils.UIUtils
Creates a read-only "star-rating" label
createTags(Set<String>, Collection<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.omero.parameters.AnnotationsToOMEROTagExporter
 
createThresholder() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.ConstantSpotSegmentation3DAlgorithm
 
createThresholder() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.DifferenceSpotSegmentation3DAlgorithm
 
createThresholder() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.GaussianFitSpotSegmentation3DAlgorithm
 
createThresholder() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm
 
createThresholder() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.data.JIPipeData
This function generates a thumbnail for this data Can return null
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeWeakDataReferenceData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.dataypes.PathData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotsCollectionData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.ImageJ2DatasetData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorHSBData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorLABData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorHSBData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorLABData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorHSBData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorLABData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorHSBData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorLABData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorHSBData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorLABData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.LUTData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.OMEImageData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
createThumbnail(int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
createTrackListener(JSlider) - Method in class org.hkijena.jipipe.ui.theme.ModernSliderUI
 
createTransferable(JComponent) - Method in class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplateBoxTransferHandler
 
createTransferable(JComponent) - Method in class org.hkijena.jipipe.extensions.nodetoolboxtool.NodeToolBoxTransferHandler
 
createUI(JComponent) - Static method in class org.hkijena.jipipe.ui.theme.ArrowLessScrollBarUI
 
createUI(JComponent) - Static method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
createUI(JComponent) - Static method in class org.hkijena.jipipe.ui.theme.ModernSliderUI
 
createUI(JComponent) - Static method in class org.hkijena.jipipe.ui.theme.ModernSpinnerUI
 
createUIForExportOperation(JIPipeWorkbench, ImageJDataExportOperation) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry
Generates a UI for the importer
createUIForImportOperation(JIPipeWorkbench, ImageJDataImportOperation) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry
Generates a UI for the importer
createUIInputSlotIconDescriptionMenuItems(String, List<ViewOnlyMenuItem>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm
 
createUIInputSlotIconDescriptionMenuItems(String, List<ViewOnlyMenuItem>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm
 
createUIInputSlotIconDescriptionMenuItems(String, List<ViewOnlyMenuItem>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm
 
createUIInputSlotIconDescriptionMenuItems(String, List<ViewOnlyMenuItem>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm
 
createUIInputSlotIconDescriptionMenuItems(String, List<ViewOnlyMenuItem>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Explanations added to the slot menu Can be null
createUndoSnapshot() - Method in class org.hkijena.jipipe.ui.tableeditor.TableEditor
Creates a new 'Undo' point
createVerticalSeparator() - Static method in class org.hkijena.jipipe.utils.UIUtils
 
createWhiteMask(ImagePlus) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.ImageROITargetArea
 
createWhiteMaskProcessor(ImagePlus) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.ImageROITargetArea
 
createXLSXSheetName(String, Collection<String>) - Static method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Creates a valid XLSX sheet name from a string
createZoomedDummyCanvas(ImagePlus, Rectangle) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Creates a dummy canvas that contains the appropriate magnification settings
createZoomedDummyCanvas(ImagePlus, double) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Creates a dummy canvas that contains the appropriate magnification settings
crop(JIPipeProgressInfo, ImagePlus, Rectangle) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm
 
crop(boolean, boolean, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Moves the ROI, so the bounding rectangle is at 0,0
crop(boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Sets node positions to make the top left to 0, 0
CropLabelsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
CropLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.CropLabelsAlgorithm
 
CropLabelsAlgorithm(CropLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.CropLabelsAlgorithm
 
CropRoiListAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify
Wrapper around RoiManager
CropRoiListAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm
Instantiates a new node type.
CropRoiListAlgorithm(CropRoiListAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm
 
CropToRoiAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi
 
CropToRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.CropToRoiAlgorithm
 
CropToRoiAlgorithm(CropToRoiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.CropToRoiAlgorithm
 
CSS_RULES - Static variable in class org.hkijena.jipipe.ui.components.markdown.MarkdownReader
 
CSS_RULES_DARK - Static variable in class org.hkijena.jipipe.ui.components.markdown.MarkdownReader
 
CumulativeTransformArrayFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
CumulativeTransformArrayFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.CumulativeTransformArrayFunction
 
CURRENT_PROJECT_FORMAT_VERSION - Static variable in class org.hkijena.jipipe.api.JIPipeProject
The current version of the project format.
CurrentStateSnapshot - Class in org.hkijena.jipipe.ui.history
A snapshot that indicates the current state.
CurrentStateSnapshot() - Constructor for class org.hkijena.jipipe.ui.history.CurrentStateSnapshot
 
currentToolAllowsConnectionDragging() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
currentToolAllowsNodeDragging() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
CustomAutoThreshold2D16UAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
Thresholding node that thresholds via an auto threshold
CustomAutoThreshold2D16UAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm
 
CustomAutoThreshold2D16UAlgorithm(CustomAutoThreshold2D16UAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm
Copies the algorithm
CustomAutoThreshold2D16UAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
 
CustomAutoThreshold2D16Uv2Algorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
Thresholding node that thresholds via an auto threshold
CustomAutoThreshold2D16Uv2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm
 
CustomAutoThreshold2D16Uv2Algorithm(CustomAutoThreshold2D16Uv2Algorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm
Copies the algorithm
CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
 
CustomAutoThreshold2D16Uv2Algorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
 
CustomAutoThreshold2D32FAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
Thresholding node that thresholds via an auto threshold
CustomAutoThreshold2D32FAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm
 
CustomAutoThreshold2D32FAlgorithm(CustomAutoThreshold2D32FAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm
Copies the algorithm
CustomAutoThreshold2D32FAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
 
CustomAutoThreshold2D32Fv2Algorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
Thresholding node that thresholds via an auto threshold
CustomAutoThreshold2D32Fv2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm
 
CustomAutoThreshold2D32Fv2Algorithm(CustomAutoThreshold2D32Fv2Algorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm
Copies the algorithm
CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
 
CustomAutoThreshold2D32Fv2Algorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
 
CustomAutoThreshold2D8UAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
Thresholding node that thresholds via an auto threshold
CustomAutoThreshold2D8UAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm
 
CustomAutoThreshold2D8UAlgorithm(CustomAutoThreshold2D8UAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm
Copies the algorithm
CustomAutoThreshold2D8UAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
 
CustomAutoThreshold2D8Uv2Algorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
Thresholding node that thresholds via an auto threshold
CustomAutoThreshold2D8Uv2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm
 
CustomAutoThreshold2D8Uv2Algorithm(CustomAutoThreshold2D8Uv2Algorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm
Copies the algorithm
CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
 
CustomAutoThreshold2D8Uv2Algorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
 
CustomBoxAndWhiskerRenderer - Class in org.hkijena.jipipe.extensions.plots.datatypes
A box-and-whisker renderer.
CustomBoxAndWhiskerRenderer() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Default constructor.
CustomColoc2<T extends RealType<T> & NativeType<T>> - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization
Customized version of Coloc_2 because many properties are protected
CustomColoc2(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.CustomColoc2
 
CustomColoc2.ColocResult<T extends RealType<T> & NativeType<T>> - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization
 
customColocalise(Img<T>, Img<T>, Coloc_2<T>.BoundingBox, Img<T>, List<ResultHandler<T>>) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.CustomColoc2
Call this method to run a whole colocalisation configuration, all selected algorithms get run on the supplied images.
customCopy(FormData, CustomValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.FormData
A custom copy function that copies the contents from source into this form.
customCopy(FormData, CustomValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.MaskDrawerFormData
 
customCopy(FormData, CustomValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.ROIDrawerFormData
 
CustomDataLoader() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedImagePlusDataViewerWindow.CustomDataLoader
 
CustomEditorPane - Class in org.hkijena.jipipe.utils
Version of the EditorPane that allows access to protected methods
CustomEditorPane() - Constructor for class org.hkijena.jipipe.utils.CustomEditorPane
 
CustomGradientThumbRenderer - Class in org.hkijena.jipipe.extensions.imageviewer.utils
 
CustomGradientThumbRenderer() - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.CustomGradientThumbRenderer
 
CustomGradientTrackRenderer - Class in org.hkijena.jipipe.extensions.imageviewer.utils
A GradientTrackRenderer that handles the case start=end gracefully
CustomGradientTrackRenderer() - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.CustomGradientTrackRenderer
 
CustomImage3DUniverse - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe
 
CustomImage3DUniverse() - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomImage3DUniverse
 
CustomInteractiveBehavior - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe
 
CustomInteractiveBehavior(ImageViewerPanel3D, CustomImage3DUniverse) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveBehavior
 
CustomInteractiveViewPlatformTransformer - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe
Copy of all contents of ViewPlatformTransformer and InteractiveViewPlatformTransformer, so the behavior can be changed
CustomInteractiveViewPlatformTransformer(CustomImage3DUniverse, BehaviorCallback) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Initialize this ViewPlatformTransformer.
customReset() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.FormData
A custom reset method
customReset() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.MaskDrawerFormData
 
customReset() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.ROIDrawerFormData
 
CustomTabbedPaneUI - Class in org.hkijena.jipipe.ui.theme
MetalTabbedPaneUI without the slants
CustomTabbedPaneUI() - Constructor for class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
CustomTabbedPaneUI.TabbedPaneLayout - Class in org.hkijena.jipipe.ui.theme
This class should be treated as a "protected" inner class.
CustomValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts
 
CustomValidationReportContext(String, Icon) - Constructor for class org.hkijena.jipipe.api.validation.contexts.CustomValidationReportContext
 
CustomValidationReportContext(JIPipeValidationReportContext, String, Icon) - Constructor for class org.hkijena.jipipe.api.validation.contexts.CustomValidationReportContext
 
CustomValidationReportContext(String) - Constructor for class org.hkijena.jipipe.api.validation.contexts.CustomValidationReportContext
 
CustomValidationReportContext(JIPipeValidationReportContext, String) - Constructor for class org.hkijena.jipipe.api.validation.contexts.CustomValidationReportContext
 

D

DARK_GRAY - Static variable in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
 
DARK_GRAY - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
DARK_THEME - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
DarkModernMetalTheme - Class in org.hkijena.jipipe.ui.theme
 
DarkModernMetalTheme() - Constructor for class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
Creates an instance of OceanTheme
DATA_FLOW_WEIGHT_HEAVY - Static variable in class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph
 
DATA_FLOW_WEIGHT_INTERNAL - Static variable in class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph
 
DATA_FLOW_WEIGHT_LIGHT - Static variable in class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph
 
DataAnnotationQueryExpression - Class in org.hkijena.jipipe.extensions.expressions
An expression that is used to query annotations
DataAnnotationQueryExpression() - Constructor for class org.hkijena.jipipe.extensions.expressions.DataAnnotationQueryExpression
 
DataAnnotationQueryExpression(String) - Constructor for class org.hkijena.jipipe.extensions.expressions.DataAnnotationQueryExpression
 
DataAnnotationQueryExpression(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.extensions.expressions.DataAnnotationQueryExpression
 
DataAnnotationQueryExpressionVariablesInfo - Class in org.hkijena.jipipe.extensions.expressions
 
DataAnnotationQueryExpressionVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.expressions.DataAnnotationQueryExpressionVariablesInfo
 
DataAnnotationToStringAnnotation - Class in org.hkijena.jipipe.extensions.annotation.algorithms
 
DataAnnotationToStringAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.DataAnnotationToStringAnnotation
 
DataAnnotationToStringAnnotation(DataAnnotationToStringAnnotation) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.DataAnnotationToStringAnnotation
 
DataBatchAssistantBatchPanel - Class in org.hkijena.jipipe.ui.batchassistant
 
DataBatchAssistantBatchPanel(JIPipeProjectWorkbench, DataBatchAssistantUI) - Constructor for class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantBatchPanel
 
DataBatchAssistantDataTableUI - Class in org.hkijena.jipipe.ui.batchassistant
UI that displays a JIPipeDataTable that is cached
DataBatchAssistantDataTableUI(JIPipeWorkbench, JIPipeDataTable) - Constructor for class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantDataTableUI
 
DataBatchAssistantDataTableUI.BatchIndexCellRenderer - Class in org.hkijena.jipipe.ui.batchassistant
 
DataBatchAssistantDataTableUI.WrapperColumnHeaderRenderer - Class in org.hkijena.jipipe.ui.batchassistant
Renders the column header of DataBatchAssistantTableModel
DataBatchAssistantInputPreviewPanel - Class in org.hkijena.jipipe.ui.batchassistant
 
DataBatchAssistantInputPreviewPanel(JIPipeWorkbench, DataBatchAssistantUI) - Constructor for class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantInputPreviewPanel
 
DataBatchAssistantInputPreviewPanelTable - Class in org.hkijena.jipipe.ui.batchassistant
 
DataBatchAssistantInputPreviewPanelTable(DataBatchAssistantInputPreviewPanel, JIPipeInputDataSlot, boolean) - Constructor for class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantInputPreviewPanelTable
 
DataBatchAssistantTableModel - Class in org.hkijena.jipipe.ui.batchassistant
Wraps around a JIPipeDataTable to display additional columns.
DataBatchAssistantTableModel(JTable, JIPipeDataTable) - Constructor for class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantTableModel
Creates a new instance
DataBatchAssistantUI - Class in org.hkijena.jipipe.ui.batchassistant
A tool that assists the user in configuring batch generation for JIPipeIteratingAlgorithm and JIPipeMergingAlgorithm
DataBatchAssistantUI(JIPipeProjectWorkbench, JIPipeGraphNode, Runnable) - Constructor for class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantUI
 
DataBatchBrowserUI - Class in org.hkijena.jipipe.ui.batchassistant
Browser for a Data batch, similar to the cache browser
DataBatchBrowserUI(JIPipeWorkbench, JIPipeMultiIterationStep) - Constructor for class org.hkijena.jipipe.ui.batchassistant.DataBatchBrowserUI
 
DataBatchStatus - Enum in org.hkijena.jipipe.extensions.forms.ui
 
DataBatchStatusData - Class in org.hkijena.jipipe.extensions.batchassistant
 
DataBatchStatusData() - Constructor for class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
DataBatchStatusData(DataBatchStatusData) - Constructor for class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
DataBatchStatusTableCellRenderer - Class in org.hkijena.jipipe.extensions.forms.ui
 
DataBatchStatusTableCellRenderer(List<DataBatchStatus>) - Constructor for class org.hkijena.jipipe.extensions.forms.ui.DataBatchStatusTableCellRenderer
 
DataBatchTree - Class in org.hkijena.jipipe.ui.batchassistant
Displays a tree that contains data stored in a data batch
DataBatchTree(JIPipeWorkbench, JIPipeMultiIterationStep) - Constructor for class org.hkijena.jipipe.ui.batchassistant.DataBatchTree
 
DataBatchUI - Class in org.hkijena.jipipe.ui.batchassistant
 
DataBatchUI(JIPipeProjectWorkbench, JIPipeGraphNode, JIPipeMultiIterationStep) - Constructor for class org.hkijena.jipipe.ui.batchassistant.DataBatchUI
 
DataConverterEdge() - Constructor for class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry.DataConverterEdge
 
DataExporterSettings - Class in org.hkijena.jipipe.extensions.settings
Settings for default data exporters
DataExporterSettings() - Constructor for class org.hkijena.jipipe.extensions.settings.DataExporterSettings
 
DataExportExpressionParameter - Class in org.hkijena.jipipe.extensions.expressions
An expression parameter designed for data export
DataExportExpressionParameter() - Constructor for class org.hkijena.jipipe.extensions.expressions.DataExportExpressionParameter
 
DataExportExpressionParameter(String) - Constructor for class org.hkijena.jipipe.extensions.expressions.DataExportExpressionParameter
 
DataExportExpressionParameter(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.extensions.expressions.DataExportExpressionParameter
 
dataInfos - Variable in class org.hkijena.jipipe.ui.documentation.JIPipeDataTypeCompendiumUI
 
DataPreviewControlUI - Class in org.hkijena.jipipe.ui.components
 
DataPreviewControlUI() - Constructor for class org.hkijena.jipipe.ui.components.DataPreviewControlUI
 
DataRowQueryExpression - Class in org.hkijena.jipipe.extensions.expressions
Expression for selecting rows inside a data table
DataRowQueryExpression() - Constructor for class org.hkijena.jipipe.extensions.expressions.DataRowQueryExpression
 
DataRowQueryExpression(String) - Constructor for class org.hkijena.jipipe.extensions.expressions.DataRowQueryExpression
 
DataRowQueryExpression(DataRowQueryExpression) - Constructor for class org.hkijena.jipipe.extensions.expressions.DataRowQueryExpression
 
DataRowQueryExpression.VariablesInfo - Class in org.hkijena.jipipe.extensions.expressions
 
DatasetDescription - Class in org.hkijena.jipipe.extensions.ilastik.utils.hdf5
 
DatasetDescription(String, DatasetType, long[], List<AxisType>, boolean) - Constructor for class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetDescription
 
DatasetEntry(String, int, String, String) - Constructor for class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetEntryProvider.DatasetEntry
 
DatasetEntryProvider - Interface in org.hkijena.jipipe.extensions.ilastik.utils.hdf5
 
DatasetEntryProvider.DatasetEntry - Class in org.hkijena.jipipe.extensions.ilastik.utils.hdf5
 
DatasetEntryProvider.ReadException - Exception in org.hkijena.jipipe.extensions.ilastik.utils.hdf5
 
DatasetEnumItemInfo() - Constructor for class org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm.DatasetEnumItemInfo
 
DatasetImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.data.input
Handling of Dataset It is assumed that these refer to images (conversion to ImageJ2DatasetData)
DatasetImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.data.input.DatasetImageJ2ModuleInput
 
DatasetImageJ2ModuleOutput - Class in org.hkijena.jipipe.extensions.imagej2.io.data.output
Handling of Dataset It is assumed that these refer to images (conversion to ImageJ2DatasetData)
DatasetImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.data.output.DatasetImageJ2ModuleOutput
 
datasets(File) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.Hdf5
Return descriptions of supported datasets in an HDF5 file, sorted by their paths.
DatasetType - Enum in org.hkijena.jipipe.extensions.ilastik.utils.hdf5
 
DataSlicer - Class in org.hkijena.jipipe.extensions.utils.algorithms
 
DataSlicer(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.DataSlicer
 
DataSlicer(DataSlicer) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.DataSlicer
 
DataSlotModuleInput<ModuleDataType,JIPipeDataType extends JIPipeData> - Class in org.hkijena.jipipe.extensions.imagej2.io.data.input
 
DataSlotModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.data.input.DataSlotModuleInput
 
DataSlotModuleIO - Interface in org.hkijena.jipipe.extensions.imagej2.io.data
 
DataSlotModuleOutput<ModuleDataType,JIPipeDataType extends JIPipeData> - Class in org.hkijena.jipipe.extensions.imagej2.io.data.output
 
DataSlotModuleOutput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.data.output.DataSlotModuleOutput
 
DataSourceNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories
 
DataSourceNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
DataTableImageJDataExporter - Class in org.hkijena.jipipe.api.compat
The fallback/default data adapter that can handle any data type.
DataTableImageJDataExporter() - Constructor for class org.hkijena.jipipe.api.compat.DataTableImageJDataExporter
 
DataTableImageJDataImporter - Class in org.hkijena.jipipe.api.compat
The fallback/default data adapter that can handle any data type.
DataTableImageJDataImporter() - Constructor for class org.hkijena.jipipe.api.compat.DataTableImageJDataImporter
 
DataToPreviewAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.misc
 
DataToPreviewAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.misc.DataToPreviewAlgorithm
 
DataToPreviewAlgorithm(DataToPreviewAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.misc.DataToPreviewAlgorithm
 
DataTracerDataTableUI - Class in org.hkijena.jipipe.ui.datatracer
UI that displays a JIPipeDataTable that is cached
DataTracerDataTableUI(JIPipeWorkbench, Store<JIPipeDataTable>) - Constructor for class org.hkijena.jipipe.ui.datatracer.DataTracerDataTableUI
 
DataTracerDataTableUI.WrapperColumnHeaderRenderer - Class in org.hkijena.jipipe.ui.datatracer
Renders the column header of DataTracerTableModel
DataTracerTableModel - Class in org.hkijena.jipipe.ui.datatracer
Wraps around a JIPipeDataTable to display additional columns.
DataTracerTableModel(JTable, Store<JIPipeDataTable>) - Constructor for class org.hkijena.jipipe.ui.datatracer.DataTracerTableModel
Creates a new instance
DataTracerUI - Class in org.hkijena.jipipe.ui.datatracer
 
DataTracerUI(JIPipeProjectWorkbench, JIPipeGraphNode, String, UUID, JIPipeDataTable, int) - Constructor for class org.hkijena.jipipe.ui.datatracer.DataTracerUI
 
DataTrackerNodeOutputUI - Class in org.hkijena.jipipe.ui.datatracer
 
DataTrackerNodeOutputUI(JIPipeProjectWorkbench, String, String, JIPipeDataTable, boolean) - Constructor for class org.hkijena.jipipe.ui.datatracer.DataTrackerNodeOutputUI
 
DataTypeDeselectedEvent(JIPipeDataTypePicker, JIPipeDataInfo) - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.DataTypeDeselectedEvent
 
DataTypeDeselectedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.DataTypeDeselectedEventEmitter
 
dataTypeDistance(Class<? extends JIPipeData>, Class<? extends JIPipeData>) - Static method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase
 
DatatypeRegisteredEvent(JIPipe, String) - Constructor for class org.hkijena.jipipe.JIPipeService.DatatypeRegisteredEvent
 
DatatypeRegisteredEventEmitter() - Constructor for class org.hkijena.jipipe.JIPipeService.DatatypeRegisteredEventEmitter
 
DataTypeSelectedEvent(JIPipeDataTypePicker, JIPipeDataInfo) - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.DataTypeSelectedEvent
 
DataTypeSelectedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.DataTypeSelectedEventEmitter
 
deactivate() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
deactivate() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
deactivate() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
deactivate() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
deactivate() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeToggleableGraphEditorTool
 
deactivate() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
DeactivateAndApplyUpdateSiteRun - Class in org.hkijena.jipipe.ui.extensions
 
DeactivateAndApplyUpdateSiteRun(JIPipeModernPluginManager, List<UpdateSite>) - Constructor for class org.hkijena.jipipe.ui.extensions.DeactivateAndApplyUpdateSiteRun
 
DeactivateDependentsConfirmationDialog - Class in org.hkijena.jipipe.ui.extensions
 
DeactivateDependentsConfirmationDialog(Component, JIPipeModernPluginManager, JIPipePlugin) - Constructor for class org.hkijena.jipipe.ui.extensions.DeactivateDependentsConfirmationDialog
 
deactivateExtension(JIPipePlugin) - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager
 
deactivateUpdateSite(UpdateSite) - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeImageJPluginManager
 
debug(Object, String) - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROToJIPipeLogger
 
debug(Object, LogMessage) - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROToJIPipeLogger
 
DECIMAL_FORMAT_FLOAT - Static variable in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl
 
DECIMAL_FORMAT_FLOAT - Static variable in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl
 
DECIMAL_FORMAT_INT - Static variable in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl
 
DECIMAL_FORMAT_INT - Static variable in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl
 
decomposePixel(int, int[]) - Method in interface org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.ColorSpace
Decomposes an integer pixel value into its channel values
decomposePixel(int, int[]) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.GreyscaleColorSpace
 
decomposePixel(int, int[]) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.HSBColorSpace
 
decomposePixel(int, int[]) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.IgnoreColorSpace
 
decomposePixel(int, int[]) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.LABColorSpace
 
decomposePixel(int, int[]) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.RGBColorSpace
 
decompressTarGZ(Path, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.ArchiveUtils
 
decompressZipFile(Path, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.ArchiveUtils
Unzips a file
deduplicateSliceMappingByOverwriting(Map<ImageProcessor, ImageSliceIndex>, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
deepCopyObject(Object) - Static method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
Deep-copies an object.
DEFAULT_AXES - Static variable in class org.hkijena.jipipe.extensions.ilastik.utils.ImgUtils
Supported ImageJ axes in the default order.
DEFAULT_BORDER - Static variable in class org.hkijena.jipipe.ui.components.ribbon.Ribbon
 
DEFAULT_DIALOG_FLAGS - Static variable in class org.hkijena.jipipe.ui.parameters.ParameterPanel
Flags suitable for standalone dialogs
DEFAULT_PLUGINS - Static variable in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
DEFAULT_SETTING_CLOSE - Static variable in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PolygonMaskDrawer2DTool
 
DEFAULT_SETTING_FILL - Static variable in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.EllipseMaskDrawer2DTool
 
DEFAULT_SETTING_FILL - Static variable in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PolygonMaskDrawer2DTool
 
DEFAULT_SETTING_FILL - Static variable in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.RectangleMaskDrawer2DTool
 
DEFAULT_SETTING_PENCIL_LINK_Y - Static variable in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PencilMaskDrawer2DTool
 
DEFAULT_SETTING_PENCIL_SIZE_X - Static variable in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PencilMaskDrawer2DTool
 
DEFAULT_SETTING_PENCIL_SIZE_Y - Static variable in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PencilMaskDrawer2DTool
 
DEFAULT_SETTING_SQUARE - Static variable in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.EllipseMaskDrawer2DTool
 
DEFAULT_SETTING_SQUARE - Static variable in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.RectangleMaskDrawer2DTool
 
DEFAULT_SETTING_START_FROM_CENTER - Static variable in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.EllipseMaskDrawer2DTool
 
DEFAULT_SETTING_START_FROM_CENTER - Static variable in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.RectangleMaskDrawer2DTool
 
DEFAULT_STRING_AXES - Static variable in class org.hkijena.jipipe.extensions.ilastik.utils.ImgUtils
Supported axes in the character format, in the same order as ImgUtils.DEFAULT_AXES.
DEFAULT_VALUES - Static variable in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
DefaultAddJIPipeInputSlot - Class in org.hkijena.jipipe.api.nodes
Default implementation of AddJIPipeInputSlot
DefaultAddJIPipeInputSlot(Class<? extends JIPipeData>, String, String, boolean, boolean, JIPipeDataSlotRole) - Constructor for class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeInputSlot
 
DefaultAddJIPipeOutputSlot - Class in org.hkijena.jipipe.api.nodes
Default implementation of AddJIPipeOutputSlot
DefaultAddJIPipeOutputSlot(Class<? extends JIPipeData>, String, String, String, boolean, JIPipeDataSlotRole) - Constructor for class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeOutputSlot
 
DefaultCacheDisplaySettings - Class in org.hkijena.jipipe.extensions.settings
A dynamic settings sheet that lets users select the default cache display
DefaultCacheDisplaySettings() - Constructor for class org.hkijena.jipipe.extensions.settings.DefaultCacheDisplaySettings
 
DefaultCacheDisplaySettings(JIPipeDynamicParameterCollection) - Constructor for class org.hkijena.jipipe.extensions.settings.DefaultCacheDisplaySettings
 
DefaultDataDisplayOperation - Class in org.hkijena.jipipe.extensions.core.data
 
DefaultDataDisplayOperation() - Constructor for class org.hkijena.jipipe.extensions.core.data.DefaultDataDisplayOperation
 
DefaultEnumItemInfo - Class in org.hkijena.jipipe.extensions.parameters.api.enums
Default implementation of EnumItemInfo
DefaultEnumItemInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.api.enums.DefaultEnumItemInfo
 
DefaultImageJ2JIPipeModuleIOService - Class in org.hkijena.jipipe.extensions.imagej2.io
 
DefaultImageJ2JIPipeModuleIOService() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.DefaultImageJ2JIPipeModuleIOService
 
DefaultImageJDataExporterUI - Class in org.hkijena.jipipe.api.compat
Default implementation of an ImageJ data exporter UI
DefaultImageJDataExporterUI(JIPipeWorkbench, ImageJDataExportOperation) - Constructor for class org.hkijena.jipipe.api.compat.DefaultImageJDataExporterUI
 
DefaultImageJDataImporterUI - Class in org.hkijena.jipipe.api.compat
Default implementation of an ImageJ data importer UI
DefaultImageJDataImporterUI(JIPipeWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.api.compat.DefaultImageJDataImporterUI
 
DefaultJIPipeParameterGenerator - Class in org.hkijena.jipipe.api.parameters
A default implementation of JIPipeParameterGenerator that shows all parameters of this JIPipeParameterCollection in a dialog before generating the data.
DefaultJIPipeParameterGenerator() - Constructor for class org.hkijena.jipipe.api.parameters.DefaultJIPipeParameterGenerator
 
DefaultNodeUIActionRequestedEvent(JIPipeGraphNodeUI) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI.DefaultNodeUIActionRequestedEvent
 
DefaultNodeUIActionRequestedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI.DefaultNodeUIActionRequestedEventEmitter
 
DefaultResultImporterSettings - Class in org.hkijena.jipipe.extensions.settings
A dynamic settings sheet that lets users select the default importer
DefaultResultImporterSettings() - Constructor for class org.hkijena.jipipe.extensions.settings.DefaultResultImporterSettings
 
DefaultResultImporterSettings(JIPipeDynamicParameterCollection) - Constructor for class org.hkijena.jipipe.extensions.settings.DefaultResultImporterSettings
 
DefaultSettingsIO - Class in org.hkijena.jipipe.extensions.ijtrackmate.io
 
DefaultSettingsIO(Class<?>) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.io.DefaultSettingsIO
 
DefaultTrackBackground - Class in org.hkijena.jipipe.extensions.parameters.library.ranges
 
DefaultTrackBackground() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.ranges.DefaultTrackBackground
 
DefaultValuesVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm.DefaultValuesVariablesInfo
 
DefineParametersAlgorithm - Class in org.hkijena.jipipe.extensions.multiparameters.nodes
Generates ParametersData objects
DefineParametersAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersAlgorithm
Creates a new instance
DefineParametersAlgorithm(DefineParametersAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersAlgorithm
Copies the algorithm
DefineParametersFromTableAlgorithm - Class in org.hkijena.jipipe.extensions.multiparameters.nodes
 
DefineParametersFromTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersFromTableAlgorithm
 
DefineParametersFromTableAlgorithm(DefineParametersFromTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersFromTableAlgorithm
 
DefineParametersFromTableAlgorithm.Column - Class in org.hkijena.jipipe.extensions.multiparameters.nodes
 
DefineParametersTableAlgorithm - Class in org.hkijena.jipipe.extensions.multiparameters.nodes
Generates ParametersData objects
DefineParametersTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersTableAlgorithm
Creates a new instance
DefineParametersTableAlgorithm(DefineParametersTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersTableAlgorithm
Creates a copy
DefineRectangularRoiAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate
Deprecated.
DefineRectangularRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.DefineRectangularRoiAlgorithm
Deprecated.
Instantiates a new node type.
DefineRectangularRoiAlgorithm(DefineRectangularRoiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.DefineRectangularRoiAlgorithm
Deprecated.
Instantiates a new node type.
DefineTablesAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes
Algorithm that annotates all data with the same annotation
DefineTablesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.DefineTablesAlgorithm
 
DefineTablesAlgorithm(DefineTablesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.DefineTablesAlgorithm
Copies the algorithm
DefineUserFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.functions
 
DefineUserFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.functions.DefineUserFunction
 
DegreeToRadiansColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a abs(x) function
DegreeToRadiansColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.DegreeToRadiansColumnOperation
 
DeleteCompartmentUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
DeleteCompartmentUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DeleteCompartmentUIContextAction
 
deleteDirectoryRecursively(Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.PathUtils
 
DeleteNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
DeleteNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DeleteNodeUIContextAction
 
description() - Method in class org.hkijena.jipipe.api.JIPipeDocumentation
 
description() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeInputSlot
 
description() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeOutputSlot
 
descriptionResourceClass() - Method in class org.hkijena.jipipe.api.JIPipeDocumentation
 
descriptionResourceURL() - Method in class org.hkijena.jipipe.api.JIPipeDocumentation
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.api.JIPipeProject.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDataDeserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.EdgeFeature.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeature.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeature.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.WekaClassifierParameter.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.multiparameters.datatypes.ParametersData.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameter.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameter.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameter.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.library.auth.PasswordParameter.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionList.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.library.colors.ColorDeserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.library.images.ImageParameter.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicCategoryEnumParameter.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.library.markup.HTMLText.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.DynamicStringEnumParameter.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.FontFamilyParameter.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.IconRef.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExporterRef.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImporterRef.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRef.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeNodeInfoRef.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeParameterTypeInfoRef.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.RectangleDeserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotDataSeries.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.Deserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin.Deserializer
 
deserializeKey(String, DeserializationContext) - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo.KeyDeserializer
 
deserializeParametersFromJson(JIPipeParameterCollection, JsonNode, JIPipeValidationReportContext, JIPipeValidationReport) - Static method in class org.hkijena.jipipe.utils.ParameterUtils
Deserializes parameters from JSON
Deserializer() - Constructor for class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataInfo.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.api.JIPipeProject.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.EdgeFeature.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeature.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeature.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.WekaClassifierParameter.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.multiparameters.datatypes.ParametersData.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameter.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameter.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameter.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.auth.PasswordParameter.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionList.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.images.ImageParameter.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicCategoryEnumParameter.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.markup.HTMLText.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.DynamicStringEnumParameter.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.FontFamilyParameter.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.IconRef.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExporterRef.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImporterRef.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRef.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeNodeInfoRef.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeParameterTypeInfoRef.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.PlotDataSeries.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.Deserializer
 
Deserializer() - Constructor for class org.hkijena.jipipe.JIPipeJsonPlugin.Deserializer
 
DespeckleFilter2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise
Wrapper around RankFilters
DespeckleFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.DespeckleFilter2DAlgorithm
Instantiates a new node type.
DespeckleFilter2DAlgorithm(DespeckleFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.DespeckleFilter2DAlgorithm
Instantiates a new node type.
destroy() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree
 
destroyData() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Closes all data and data annotations and replaces their values in the table by null.
detachProgress() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
Creates a sub-progress that detaches the references to the global process counters.
detachTab(JComponent, DocumentTabPane.DocumentTab, boolean) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Detaches a tab
DevelopmentPlugin - Class in org.hkijena.jipipe.extensions.dev
Extension containing some additional tools
DevelopmentPlugin() - Constructor for class org.hkijena.jipipe.extensions.dev.DevelopmentPlugin
 
DiamondImageJ2ShapeData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.shapes
 
DiamondImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.DiamondImageJ2ShapeData
 
DiamondImageJ2ShapeData(DiamondImageJ2ShapeData) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.DiamondImageJ2ShapeData
 
DiamondImageJ2ShapeData(DiamondShape) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.DiamondImageJ2ShapeData
 
DiamondTipsImageJ2ShapeData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.shapes
 
DiamondTipsImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.DiamondTipsImageJ2ShapeData
 
DiamondTipsImageJ2ShapeData(DiamondTipsImageJ2ShapeData) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.DiamondTipsImageJ2ShapeData
 
DiamondTipsImageJ2ShapeData(DiamondTipsShape) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.DiamondTipsImageJ2ShapeData
 
DifferenceOfGaussian2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features
Wrapper around GaussianBlur
DifferenceOfGaussian2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm
Instantiates a new node type.
DifferenceOfGaussian2DAlgorithm(DifferenceOfGaussian2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm
 
DifferenceSpotSegmentation3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.segmentation
 
DifferenceSpotSegmentation3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.DifferenceSpotSegmentation3DAlgorithm
 
DifferenceSpotSegmentation3DAlgorithm(DifferenceSpotSegmentation3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.DifferenceSpotSegmentation3DAlgorithm
 
DilateLabelsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
DilateLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.DilateLabelsAlgorithm
 
DilateLabelsAlgorithm(DilateLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.DilateLabelsAlgorithm
 
dims - Variable in class org.hkijena.jipipe.extensions.ilastik.utils.GridCoordinates.Block
 
dims - Variable in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetDescription
Dataset dimensions in the column-major order.
DirectionalFilter2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features
 
DirectionalFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm
 
DirectionalFilter2DAlgorithm(DirectionalFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm
 
DirectoryEntry() - Constructor for class org.hkijena.jipipe.api.JIPipeProjectDirectories.DirectoryEntry
 
DirectoryEntry(JIPipeProjectDirectories.DirectoryEntry) - Constructor for class org.hkijena.jipipe.api.JIPipeProjectDirectories.DirectoryEntry
 
DisableNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
DisableNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableNodeUIContextAction
 
disableOnNonMatch() - Method in class org.hkijena.jipipe.extensions.nodeexamples.LoadExampleContextMenuAction
 
disableOnNonMatch() - Method in interface org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeUIContextAction
Determines if an item should be disabled or removed if it does not match
disableOnNonMatch() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheNodeUIContextAction
 
disableOnNonMatch() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheOnlyPredecessorsNodeUIContextAction
 
disableOnNonMatch() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheShowIntermediateNodeUIContextAction
 
DisablePassThroughNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
DisablePassThroughNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisablePassThroughNodeUIContextAction
 
DisableSaveOutputsNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
DisableSaveOutputsNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableSaveOutputsNodeUIContextAction
 
DisableVirtualOutputNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
DisableVirtualOutputNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableVirtualOutputNodeUIContextAction
 
disconnect(JIPipeDataSlot, JIPipeDataSlot, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Disconnects an input and an output slot
disconnect(JIPipeGraphConnection, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
disconnect(JIPipeGraphConnection) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
disconnectAll(JIPipeDataSlot, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Completely disconnects a slot
disconnectAll(JIPipeDataSlot, Set<JIPipeDataSlot>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
DisconnectHighlight(JIPipeNodeUISlotActiveArea, Set<JIPipeDataSlot>) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisconnectHighlight
 
disconnectSlot(JIPipeDataSlot, JIPipeDataSlot) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Disconnects two slots
dismiss() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
dismiss(JIPipeNotification) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox
 
dismiss(String) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox
 
dismissAll() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox
 
DismissedEvent(JIPipeNotificationInbox, JIPipeNotification) - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.DismissedEvent
 
DismissedEventEmitter() - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.DismissedEventEmitter
 
dismissNewExtensions() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.api.compartments.datatypes.JIPipeCompartmentOutputData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in interface org.hkijena.jipipe.api.data.JIPipeData
This function should display the data in the GUI.
display(JIPipeData, String, JIPipeWorkbench, JIPipeDataSource) - Method in interface org.hkijena.jipipe.api.data.JIPipeDataDisplayOperation
Shows the data in the UI
display(JIPipeDataTable, int, JIPipeWorkbench, boolean) - Method in interface org.hkijena.jipipe.api.data.JIPipeDataDisplayOperation
Applies the operation on a data table
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.api.data.JIPipeEmptyData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeEmptyThumbnailData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeWeakDataReferenceData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeModelData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeSizeModelData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageData
 
display(JIPipeData, String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.core.data.DefaultDataDisplayOperation
 
display(JIPipeData, String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.core.data.OpenTextInJIPipeDataOperation
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.filesystem.dataypes.PathData
 
display(JIPipeData, String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.filesystem.resultanalysis.CopyPathDataOperation
 
display(JIPipeData, String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.filesystem.resultanalysis.OpenPathDataOperation
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.ParameterFormData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
display(JIPipeData, String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.ij3d.display.AddROI3DToManagerOperation
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.ModelData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotDetectorData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotsCollectionData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotTrackerData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
 
display(JIPipeData, String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.trackscheme.TrackSchemeDataDisplayOperation
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.ijweka.datatypes.WekaModelData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.ilastik.datatypes.IlastikModelData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.ImageJ2DatasetData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.ImageJ2OutOfBoundsFactoryData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.ImageJ2ShapeData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.MaskDrawerFormData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.ROIDrawerFormData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.LUTData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.OMEImageData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
 
display(JIPipeData, String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddROIToActiveJIPipeImageViewerDataDisplay
 
display(JIPipeData, String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddROIToJIPipeImageViewerDataDisplay
 
display(JIPipeData, String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddToROIManagerDataDisplay
 
display(JIPipeData, String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.OpenInImageJDataDisplay
 
display(JIPipeData, String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImportImageJPathDataOperation
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.multiparameters.datatypes.ParametersData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROAnnotationReferenceData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMERODatasetReferenceData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROGroupReferenceData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROImageReferenceData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROProjectReferenceData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
display(JIPipeData, String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.plots.ui.resultanalysis.OpenPlotInJIPipeDataOperation
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.strings.StringData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.DoubleArrayTableColumn
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.FloatArrayTableColumn
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RelabeledTableColumn
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RowIndexTableColumn
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.StringArrayTableColumn
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ZeroTableColumn
 
display(JIPipeData, String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.tables.display.CacheAwareOpenResultsTableInJIPipeDataOperation
 
display(JIPipeData, String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.tables.display.OpenResultsTableInImageJDataOperation
 
display(JIPipeData, String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.tables.display.OpenResultsTableInJIPipeTabDataOperation
 
display(String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.tables.TableColumnReference
 
display(JIPipeData, String, JIPipeWorkbench, JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.utils.display.ImportJIPipeProjectDataOperation
 
displayAnnotations(JIPipeDataTableDataSource) - Method in class org.hkijena.jipipe.ui.cache.JIPipeCachedDataViewerAnnotationInfoPanel
 
displayDataAnnotation(JIPipeDataTable, int, JIPipeDataAnnotation, JIPipeWorkbench) - Method in interface org.hkijena.jipipe.api.data.JIPipeDataDisplayOperation
Applies the operation on a data table
DisplayedSlotEdge(JIPipeDataSlot, JIPipeDataSlot, JIPipeGraphEdge) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
displayErrors(Throwable) - Method in class org.hkijena.jipipe.ui.components.UserFriendlyErrorUI
Adds an exception to the display.
displayErrors(JIPipeValidationReport) - Method in class org.hkijena.jipipe.ui.components.UserFriendlyErrorUI
Adds a report to the display Does not add the necessary vertical glue.
DisplayRange - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
Stores information about the calibration of an image
DisplayRange() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.DisplayRange
 
DisplayRange(double, double) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.DisplayRange
 
DisplayRangeCalibrationAlgorithm - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms
 
DisplayRangeCalibrationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm
 
DisplayRangeCalibrationAlgorithm(DisplayRangeCalibrationAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm
 
dispose() - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter
 
dispose() - Method in class org.hkijena.jipipe.extensions.forms.ui.FormsDialog
 
dispose() - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
dispose() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D
 
dispose() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
dispose() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
dispose() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
dispose() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
dispose() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerCacheDataViewerWindow
 
dispose() - Method in class org.hkijena.jipipe.extensions.tables.display.CachedTableViewerWindow
 
dispose() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
 
dispose() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCachedDataDisplayCacheControl
 
dispose() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
 
dispose() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableUI
 
dispose() - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerUI
 
dispose() - Method in class org.hkijena.jipipe.ui.datatracer.DataTrackerNodeOutputUI
 
dispose() - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties.JIPipePipelineSingleAlgorithmSelectionPanelUI
 
dispose() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.properties.JIPipeSingleCompartmentSelectionPanelUI
 
dispose() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
dispose() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
dispose() - Method in class org.hkijena.jipipe.ui.grouping.JIPipeNodeGroupUI
 
dispose() - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
 
dispose() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
 
dispose() - Method in class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
 
dispose() - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
DissolveCompartmentsTool - Class in org.hkijena.jipipe.extensions.tools
 
DissolveCompartmentsTool(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.tools.DissolveCompartmentsTool
Creates a new instance
distanceEyeOrigin() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Calculates the distance between the viewer's eye and the origin in the vworld space.
distanceEyeTo(Point3d) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Calculates the distance between the viewer's eye and an arbitrary point in the vworld space.
DistanceMap3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.binary
 
DistanceMap3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.binary.DistanceMap3DAlgorithm
 
DistanceMap3DAlgorithm(DistanceMap3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.binary.DistanceMap3DAlgorithm
 
distanceTo(Point3d) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.Point3d
Calculates the distances between two locations Accounts for negative Z/C/T locations (location everywhere)
DistanceTransformWatershed2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary
Wrapper around EDM
DistanceTransformWatershed2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.DistanceTransformWatershed2DAlgorithm
Instantiates a new node type.
DistanceTransformWatershed2DAlgorithm(DistanceTransformWatershed2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.DistanceTransformWatershed2DAlgorithm
Instantiates a new node type.
DistributeDataRandomlyByCountAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms.distribute
 
DistributeDataRandomlyByCountAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.distribute.DistributeDataRandomlyByCountAlgorithm
 
DistributeDataRandomlyByCountAlgorithm(DistributeDataRandomlyByCountAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.distribute.DistributeDataRandomlyByCountAlgorithm
 
DistributeDataRandomlyByPercentageAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms.distribute
 
DistributeDataRandomlyByPercentageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.distribute.DistributeDataRandomlyByPercentageAlgorithm
 
DistributeDataRandomlyByPercentageAlgorithm(DistributeDataRandomlyByPercentageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.distribute.DistributeDataRandomlyByPercentageAlgorithm
 
DivideByMaximumAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
Wrapper around ImageProcessor
DivideByMaximumAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.DivideByMaximumAlgorithm
Instantiates a new node type.
DivideByMaximumAlgorithm(DivideByMaximumAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.DivideByMaximumAlgorithm
Instantiates a new node type.
DOCUMENTATION_BELOW - Static variable in class org.hkijena.jipipe.ui.components.FormPanel
Flag that indicates that documentation should be shown below if enabled.
DOCUMENTATION_NO_UI - Static variable in class org.hkijena.jipipe.ui.components.FormPanel
Flag that indicates that documentation should be supported, but there should be no dedicated panel
DocumentationUtils - Class in org.hkijena.jipipe.utils
 
DocumentationUtils() - Constructor for class org.hkijena.jipipe.utils.DocumentationUtils
 
DocumentChangeListener - Class in org.hkijena.jipipe.ui.components
Listener for any changes in a Document
DocumentChangeListener() - Constructor for class org.hkijena.jipipe.ui.components.DocumentChangeListener
 
DocumentedComponent - Class in org.hkijena.jipipe.ui.components
Wrapper around a component that adds a split pane that shows documentation
DocumentedComponent(boolean, MarkdownDocument, Component) - Constructor for class org.hkijena.jipipe.ui.components.DocumentedComponent
 
DocumentTabComponent(DocumentTabPane, Icon) - Constructor for class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.DocumentTabComponent
 
DocumentTabListCellRenderer - Class in org.hkijena.jipipe.ui.components.tabs
Renders DocumentTabPane tabs
DocumentTabListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.components.tabs.DocumentTabListCellRenderer
Creates a new renderer
DocumentTabPane - Class in org.hkijena.jipipe.ui.components.tabs
JTabbedPane with larger tabs, ability to close tabs, singleton tabs that are hidden instead of being closed
DocumentTabPane() - Constructor for class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
 
DocumentTabPane(boolean, DocumentTabPane.TabPlacement) - Constructor for class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Creates a new instance
documentTabPane - Variable in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWorkbench
 
documentTabPane - Variable in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
DocumentTabPane.CloseMode - Enum in org.hkijena.jipipe.ui.components.tabs
Behavior of the tab close button
DocumentTabPane.DocumentTab - Class in org.hkijena.jipipe.ui.components.tabs
Encapsulates a tab
DocumentTabPane.DocumentTabComponent - Class in org.hkijena.jipipe.ui.components.tabs
 
DocumentTabPane.SingletonTab - Class in org.hkijena.jipipe.ui.components.tabs
Encapsulates a singleton tab
DocumentTabPane.SingletonTabMode - Enum in org.hkijena.jipipe.ui.components.tabs
 
DocumentTabPane.TabPlacement - Enum in org.hkijena.jipipe.ui.components.tabs
 
DocumentTabPane.TabRenamedEvent - Class in org.hkijena.jipipe.ui.components.tabs
 
DocumentTabPane.TabRenamedEventEmitter - Class in org.hkijena.jipipe.ui.components.tabs
 
DocumentTabPane.TabRenamedEventListener - Interface in org.hkijena.jipipe.ui.components.tabs
 
doInBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Hough_Circle
 
doInBackground() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunWorker
 
done() - Method in class org.hkijena.jipipe.ui.ijupdater.IJProgressAdapter
 
done() - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeProgressAdapter
 
done() - Method in class org.hkijena.jipipe.ui.ijupdater.ProgressAdapter
 
done() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunWorker
 
doProcess(MouseEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveBehavior
 
DotSlideshow - Class in org.hkijena.jipipe.utils.ui
 
DotSlideshow() - Constructor for class org.hkijena.jipipe.utils.ui.DotSlideshow
 
DoubleAndDoublePairParameter - Class in org.hkijena.jipipe.extensions.parameters.library.pairs
A parameter that renames an integer into another integer
DoubleAndDoublePairParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.DoubleAndDoublePairParameter
Creates a new instance
DoubleAndDoublePairParameter(DoubleAndDoublePairParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.DoubleAndDoublePairParameter
Creates a copy
DoubleAndDoublePairParameter.List - Class in org.hkijena.jipipe.extensions.parameters.library.pairs
A collection of multiple DoubleAndDoublePairParameter
DoubleArrayColumnToTableConverter - Class in org.hkijena.jipipe.extensions.tables
Converts a column to a table
DoubleArrayColumnToTableConverter() - Constructor for class org.hkijena.jipipe.extensions.tables.DoubleArrayColumnToTableConverter
 
DoubleArrayParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays
 
DoubleArrayParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.DoubleArrayParameterImageJ2ModuleInput
 
DoubleArrayTableColumn - Class in org.hkijena.jipipe.extensions.tables.datatypes
TableColumn that contains doubles.
DoubleArrayTableColumn(double[], String) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.DoubleArrayTableColumn
Creates a new instance
DoubleConstantValueImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant
 
DoubleConstantValueImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.DoubleConstantValueImageJ2OutOfBoundsFactoryData
 
DoubleConstantValueImageJ2OutOfBoundsFactoryData(OutOfBoundsConstantValueFactory<?, ?>) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.DoubleConstantValueImageJ2OutOfBoundsFactoryData
 
DoubleConstantValueImageJ2OutOfBoundsFactoryData(DoubleConstantValueImageJ2OutOfBoundsFactoryData) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.DoubleConstantValueImageJ2OutOfBoundsFactoryData
 
DoubleFormData - Class in org.hkijena.jipipe.extensions.forms.datatypes
 
DoubleFormData() - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.DoubleFormData
 
DoubleFormData(DoubleFormData) - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.DoubleFormData
 
DoubleFormGeneratorAlgorithm - Class in org.hkijena.jipipe.extensions.forms.algorithms.generators
 
DoubleFormGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.generators.DoubleFormGeneratorAlgorithm
 
DoubleFormGeneratorAlgorithm(DoubleFormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.generators.DoubleFormGeneratorAlgorithm
 
doubleHeight - Variable in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines
 
DoubleList - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.list
A list of Double
DoubleList() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.list.DoubleList
Creates a new empty list
DoubleList(DoubleList) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.list.DoubleList
Creates a copy
DoubleParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives
 
DoubleParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.DoubleParameterImageJ2ModuleInput
 
DoubleParameterImageJ2ModuleOutput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives
 
DoubleParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.DoubleParameterImageJ2ModuleOutput
 
DoubleParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Info for Double
DoubleParameterTypeInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.DoubleParameterTypeInfo
 
DoublePrimitiveParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Info for Double
DoublePrimitiveParameterTypeInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.DoublePrimitiveParameterTypeInfo
 
DoubleToStringFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.math
 
DoubleToStringFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.math.DoubleToStringFunction
 
download() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
Downloads the installer
download(URL, Path, String, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.WebUtils
 
DOWNLOAD_URL - Static variable in class org.hkijena.jipipe.ui.documentation.DownloadOfflineManualRun
 
DownloadEnvironment() - Constructor for class org.hkijena.jipipe.extensions.settings.DownloadSettings.DownloadEnvironment
 
DownloadEnvironment(ProcessEnvironment) - Constructor for class org.hkijena.jipipe.extensions.settings.DownloadSettings.DownloadEnvironment
 
DownloadFilesDataSource - Class in org.hkijena.jipipe.extensions.filesystem.datasources
 
DownloadFilesDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.DownloadFilesDataSource
 
DownloadFilesDataSource(DownloadFilesDataSource) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.DownloadFilesDataSource
 
downloadNative(URL, Path, String, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.WebUtils
The native download method written in Java
DownloadOfflineManualRun - Class in org.hkijena.jipipe.ui.documentation
 
DownloadOfflineManualRun() - Constructor for class org.hkijena.jipipe.ui.documentation.DownloadOfflineManualRun
 
DownloadOMEROImageAlgorithm - Class in org.hkijena.jipipe.extensions.omero.nodes.download
 
DownloadOMEROImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROImageAlgorithm
 
DownloadOMEROImageAlgorithm(DownloadOMEROImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROImageAlgorithm
 
DownloadOMEROTableAlgorithm - Class in org.hkijena.jipipe.extensions.omero.nodes.download
 
DownloadOMEROTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROTableAlgorithm
 
DownloadOMEROTableAlgorithm(DownloadOMEROTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROTableAlgorithm
 
downloadPythonArchive() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller
Downloads the archive
DownloadSettings - Class in org.hkijena.jipipe.extensions.settings
Settings related to downloads
DownloadSettings() - Constructor for class org.hkijena.jipipe.extensions.settings.DownloadSettings
Creates a new instance
DownloadSettings.DownloadEnvironment - Class in org.hkijena.jipipe.extensions.settings
 
dragEnter(DropTargetDragEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.dragdrop.JIPipeCreateNodesFromDraggedDataDragAndDropBehavior
 
dragEnter(DropTargetDragEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.dragdrop.JIPipeCompartmentGraphDragAndDropBehavior
 
dragExit(DropTargetEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.dragdrop.JIPipeCreateNodesFromDraggedDataDragAndDropBehavior
 
dragExit(DropTargetEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.dragdrop.JIPipeCompartmentGraphDragAndDropBehavior
 
dragOver(DropTargetDragEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.dragdrop.JIPipeCreateNodesFromDraggedDataDragAndDropBehavior
 
dragOver(DropTargetDragEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.dragdrop.JIPipeCompartmentGraphDragAndDropBehavior
 
DragThroughMouseListener(Component, Component) - Constructor for class org.hkijena.jipipe.utils.UIUtils.DragThroughMouseListener
 
draw(ROI3DListData, ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.utils.Roi3DDrawer
 
draw(ImagePlus, ImageProcessor, Roi, int, Rectangle, Color, Color, Font, boolean) - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiLabel
Draws a label on an image processor
draw(Graphics2D, Roi, int, Point2D, double, Color, Color, Font, boolean) - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiLabel
 
draw(ImagePlus, boolean, boolean, boolean, ROIElementDrawingMode, ROIElementDrawingMode, int, Color, Color) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Draw on top of an RGB image
draw(ImageProcessor, ImageSliceIndex, boolean, boolean, boolean, boolean, boolean, boolean, int, Color, Color, Collection<Roi>) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Draw on top of an RGB processor with specified coordinates.
draw(ImagePlus, ROIListData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
draw(int, int, int, ImageProcessor) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin2D
Draws the image in the processor
draw(int, int, int, ImageProcessor) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.CalibrationPlugin2D
 
draw(int, int, int, ImageProcessor) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.LUTManagerPlugin2D
 
draw(int, int, int, ImageProcessor) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.PixelInfoPlugin2D
 
draw(int, int, int, ImageProcessor) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
drawAnchoredStringLabel(ImageProcessor, String, Rectangle, Color, Color, Font, boolean, Anchor) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
drawCenteredStringLabel(ImagePlus, ImageProcessor, String, Rectangle, Color, Color, Font, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
drawCheck(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.utils.ui.CheckBoxIcon
 
drawCheck(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.utils.ui.CheckBoxMenuItemIcon
 
DrawerLabelSettings - Class in org.hkijena.jipipe.extensions.ijtrackmate.utils
 
DrawerLabelSettings() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.utils.DrawerLabelSettings
 
DrawerLabelSettings(DrawerLabelSettings) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.utils.DrawerLabelSettings
 
drawFilamentsOnGraphics(Filaments3DData, Graphics2D, Rectangle, double, int, int, int, boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
drawFilamentsOnProcessor(Filaments3DData, ColorProcessor, int, int, int) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
drawHistogramLine(Overlay, Histogram2D, RandomAccessibleInterval<? extends RealType<?>>, double, double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
drawHorizontalItem(Graphics2D, CategoryItemRendererState, Rectangle2D, CategoryPlot, CategoryAxis, ValueAxis, CategoryDataset, int, int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Draws the visual representation of a single data item when the plot has a horizontal orientation.
drawItem(Graphics2D, CategoryItemRendererState, Rectangle2D, CategoryPlot, CategoryAxis, ValueAxis, CategoryDataset, int, int, int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Draw a single data item.
drawLabelOnGraphics(String, Graphics2D, double, double, double, Color, Color, Font, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
Draws a label on graphics
drawMask(boolean, boolean, int, ImagePlus) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Draws the ROI over an existing mask image
DrawMaskAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms
 
DrawMaskAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawMaskAlgorithm
 
DrawMaskAlgorithm(DrawMaskAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawMaskAlgorithm
 
drawMaskForSliceIndex(boolean, boolean, int, ImagePlus, ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Draws the ROI over an existing mask image
drawOnGraphics(SpotsCollectionData, Graphics2D, Rectangle, ImageSliceIndex, Collection<Spot>) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer
 
drawOnGraphics(TrackCollectionData, Graphics2D, Rectangle, ImageSliceIndex, Collection<DefaultWeightedEdge>) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
drawOnProcessor(ROIListData, ColorProcessor, ImageSliceIndex, Set<Roi>) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
Draws rois on a processor
DrawOvalRoiAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw
 
DrawOvalRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawOvalRoiAlgorithm
 
DrawOvalRoiAlgorithm(DrawOvalRoiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawOvalRoiAlgorithm
 
drawOverlayOnGraphics(ROIListData, Graphics2D, Rectangle, ImageSliceIndex, Set<Roi>, double) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
Draws ROI as overlay.
DrawRectangleRoiAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw
 
DrawRectangleRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm
 
DrawRectangleRoiAlgorithm(DrawRectangleRoiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm
 
DrawROIAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms
 
DrawROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawROIAlgorithm
 
DrawROIAlgorithm(DrawROIAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawROIAlgorithm
 
DrawScaleBarAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration
 
DrawScaleBarAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
DrawScaleBarAlgorithm(DrawScaleBarAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
DrawScaleBarAlgorithm.TextSettings - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration
 
DrawScaleBarRoiAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw
 
DrawScaleBarRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
DrawScaleBarRoiAlgorithm(DrawScaleBarRoiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
DrawScaleBarRoiAlgorithm.TextSettings - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw
 
drawStringVerticallyCentered(Graphics2D, String, int, int, FontMetrics) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
DrawTextRoiAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw
 
DrawTextRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
DrawTextRoiAlgorithm(DrawTextRoiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
drawVerticalItem(Graphics2D, CategoryItemRendererState, Rectangle2D, CategoryPlot, CategoryAxis, ValueAxis, CategoryDataset, int, int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Draws the visual representation of a single data item when the plot has a vertical orientation.
drop(DropTargetDropEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.dragdrop.JIPipeCreateNodesFromDraggedDataDragAndDropBehavior
 
drop(DropTargetDropEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.dragdrop.JIPipeCompartmentGraphDragAndDropBehavior
 
DROP_SHADOW_BORDER - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
dropActionChanged(DropTargetDragEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.dragdrop.JIPipeCreateNodesFromDraggedDataDragAndDropBehavior
 
dropActionChanged(DropTargetDragEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.dragdrop.JIPipeCompartmentGraphDragAndDropBehavior
 
DropShadowRenderer - Class in org.hkijena.jipipe.ui.components.renderers
 
DropShadowRenderer() - Constructor for class org.hkijena.jipipe.ui.components.renderers.DropShadowRenderer
 
DropShadowRenderer(Color, int) - Constructor for class org.hkijena.jipipe.ui.components.renderers.DropShadowRenderer
 
DropShadowRenderer(boolean) - Constructor for class org.hkijena.jipipe.ui.components.renderers.DropShadowRenderer
 
DropShadowRenderer(Color, int, float, int, boolean, boolean, boolean, boolean) - Constructor for class org.hkijena.jipipe.ui.components.renderers.DropShadowRenderer
 
dummyAccess(Class<?>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
Sets up a dummy access.
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataAnnotation
Fully duplicates the data
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compartments.datatypes.JIPipeCompartmentOutputData
 
duplicate(JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.data.JIPipeData
Duplicates the data
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore
Fully duplicates the virtual data
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
duplicate() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeEmptyData
 
duplicate() - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration
Creates a deep copy
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeEmptyThumbnailData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeSerializedJsonObjectData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeWeakDataReferenceData
 
duplicate(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
duplicate(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo
 
duplicate(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo
 
duplicate() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Copies the algorithm.
duplicate() - Method in class org.hkijena.jipipe.api.nodes.JIPipeIOSlotConfiguration
 
duplicate(JIPipeGraphNode) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
Copies an existing algorithm instance
duplicate(Object) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterTypeInfo
 
duplicate(Object) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterTypeInfo
Duplicates the parameter
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeModelData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeSizeModelData
 
duplicate(JIPipeGraphNode) - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.dataypes.PathData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.BooleanFormData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.DoubleFormData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.EnumFormData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.GroupHeaderFormData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.IntegerFormData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.StringFormData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.ModelData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotDetectorData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotTrackerData
 
duplicate(JIPipeGraphNode) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo
 
duplicate(JIPipeGraphNode) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijweka.datatypes.WekaModelData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ilastik.datatypes.IlastikModelData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.ImageJ2DatasetData
 
duplicate(JIPipeGraphNode) - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.MaskDrawerFormData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.ROIDrawerFormData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.LUTData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.OMEImageData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
 
duplicate(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Faster version of the duplicate() method in ImagePlus.
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.multiparameters.datatypes.ParametersData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROAnnotationReferenceData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMERODatasetReferenceData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROGroupReferenceData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROImageReferenceData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROProjectReferenceData
 
duplicate(Object) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterTypeInfo
 
duplicate(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanParameterTypeInfo
 
duplicate(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanPrimitiveParameterTypeInfo
 
duplicate(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ByteParameterTypeInfo
 
duplicate(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BytePrimitiveParameterTypeInfo
 
duplicate(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.DoubleParameterTypeInfo
 
duplicate(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.DoublePrimitiveParameterTypeInfo
 
duplicate(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.FloatParameterTypeInfo
 
duplicate(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.FloatPrimitiveParameterTypeInfo
 
duplicate(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.IntParameterTypeInfo
 
duplicate(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.IntPrimitiveParameterTypeInfo
 
duplicate(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.LongParameterTypeInfo
 
duplicate(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.LongPrimitiveParameterTypeInfo
 
duplicate(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ShortParameterTypeInfo
 
duplicate(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ShortPrimitiveParameterTypeInfo
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
duplicate(JIPipeGraphNode) - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2AlgorithmInfo
 
duplicate() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DIndexedMeshGeometry
 
duplicate() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry
 
duplicate() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
duplicate() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DUnindexedMeshGeometry
 
duplicate() - Method in class org.hkijena.jipipe.extensions.scene3d.model.Scene3DGroupNode
 
duplicate() - Method in interface org.hkijena.jipipe.extensions.scene3d.model.Scene3DNode
Duplicates the node
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.StringData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.DoubleArrayTableColumn
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.FloatArrayTableColumn
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RelabeledTableColumn
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RowIndexTableColumn
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.StringArrayTableColumn
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ZeroTableColumn
 
duplicate(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.TableColumnReference
 
duplicateColumn(int, String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Duplicates a column
DuplicateDataAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms
 
DuplicateDataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.DuplicateDataAlgorithm
 
DuplicateDataAlgorithm(DuplicateDataAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.DuplicateDataAlgorithm
 
duplicateImage(ImageProcessor) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm
 
duplicateImage(ImageProcessor) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm
 
duplicateImage(ImageProcessor) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm
 
duplicateImage(ImageProcessor) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm
 
duplicateImage(ImageProcessor) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm
 
duplicateImage(ImageProcessor) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm
 
duplicateNode(T) - Static method in class org.hkijena.jipipe.JIPipe
Duplicates a JIPipeGraphNode
duplicateObject3D(Object3D) - Static method in class org.hkijena.jipipe.extensions.ij3d.IJ3DUtils
Duplicates an Object3D
duplicateParameter(T) - Static method in class org.hkijena.jipipe.JIPipe
Duplicates a value that is registered as parameter
DynamicCategoryEnumParameter - Class in org.hkijena.jipipe.extensions.parameters.library.jipipe
 
DynamicCategoryEnumParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicCategoryEnumParameter
Creates a new instance with null value
DynamicCategoryEnumParameter(DynamicStringEnumParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicCategoryEnumParameter
Creates a copy
DynamicCategoryEnumParameter(String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicCategoryEnumParameter
Creates a new instance
DynamicCategoryEnumParameter.Deserializer - Class in org.hkijena.jipipe.extensions.parameters.library.jipipe
DynamicCategoryEnumParameter.Serializer - Class in org.hkijena.jipipe.extensions.parameters.library.jipipe
DynamicDataDisplayOperationIdEnumParameter - Class in org.hkijena.jipipe.extensions.parameters.library.jipipe
Parameter that acts as dynamic enum.
DynamicDataDisplayOperationIdEnumParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter
Creates a new instance with null value
DynamicDataDisplayOperationIdEnumParameter(DynamicDataDisplayOperationIdEnumParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter
Creates a copy
DynamicDataDisplayOperationIdEnumParameter(String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter
Creates a new instance
DynamicDataDisplayOperationIdEnumParameter.Deserializer - Class in org.hkijena.jipipe.extensions.parameters.library.jipipe
DynamicDataDisplayOperationIdEnumParameter.Serializer - Class in org.hkijena.jipipe.extensions.parameters.library.jipipe
DynamicDataImportOperationIdEnumParameter - Class in org.hkijena.jipipe.extensions.parameters.library.jipipe
Parameter that acts as dynamic enum.
DynamicDataImportOperationIdEnumParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter
Creates a new instance with null value
DynamicDataImportOperationIdEnumParameter(DynamicDataImportOperationIdEnumParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter
Creates a copy
DynamicDataImportOperationIdEnumParameter(String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter
Creates a new instance
DynamicDataImportOperationIdEnumParameter.Deserializer - Class in org.hkijena.jipipe.extensions.parameters.library.jipipe
DynamicDataImportOperationIdEnumParameter.Serializer - Class in org.hkijena.jipipe.extensions.parameters.library.jipipe
DynamicEnumParameter<T> - Class in org.hkijena.jipipe.extensions.parameters.api.enums
Parameter that acts as dynamic enum.
DynamicEnumParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicEnumParameter
Creates a new instance with null value
DynamicEnumParameter(T) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicEnumParameter
Creates a new instance
DynamicEnumParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.api.enums
A parameter editor UI that works for all enumerations
DynamicEnumParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicEnumParameterEditorUI
 
DynamicEnumParameterEditorUI.Renderer<T> - Class in org.hkijena.jipipe.extensions.parameters.api.enums
Renders items in enum parameters
DynamicEnumParameterSettings - Annotation Type in org.hkijena.jipipe.extensions.parameters.api.enums
Settings for dynamic enum-like parameters for non Enum data types
DynamicParameterEditorDialog - Class in org.hkijena.jipipe.ui.parameters
 
DynamicParameterEditorDialog(Component, JIPipeWorkbench, JIPipeDynamicParameterCollection) - Constructor for class org.hkijena.jipipe.ui.parameters.DynamicParameterEditorDialog
 
DynamicParameterEditorDialog.ParameterEntry - Class in org.hkijena.jipipe.ui.parameters
 
DynamicParameterEditorDialog.ParameterEntryListCellRenderer - Class in org.hkijena.jipipe.ui.parameters
 
DynamicSetParameter<T> - Class in org.hkijena.jipipe.extensions.parameters.api.enums
Parameter that acts as dynamic enum where a set of items can be selected Use DynamicEnumParameterSettings to define a supplier for the items.
DynamicSetParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameter
Creates a new instance with null value
DynamicSetParameter(DynamicSetParameter<T>) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameter
 
DynamicSetParameter(Set<T>) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameter
 
DynamicSetParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.api.enums
A parameter editor UI that works for all enumerations
DynamicSetParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameterEditorUI
 
DynamicSetParameterSettings - Annotation Type in org.hkijena.jipipe.extensions.parameters.api.enums
Settings for dynamic enum-like parameters for non Enum data types
DynamicSidebarRatio() - Constructor for class org.hkijena.jipipe.utils.AutoResizeSplitPane.DynamicSidebarRatio
 
DynamicSidebarRatio(int, boolean) - Constructor for class org.hkijena.jipipe.utils.AutoResizeSplitPane.DynamicSidebarRatio
 
DynamicStringEnumParameter - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Parameter that acts as dynamic enum.
DynamicStringEnumParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.DynamicStringEnumParameter
Creates a new instance with null value
DynamicStringEnumParameter(DynamicStringEnumParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.DynamicStringEnumParameter
Creates a copy
DynamicStringEnumParameter(String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.DynamicStringEnumParameter
Creates a new instance
DynamicStringEnumParameter.Deserializer - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
DynamicStringEnumParameter.Serializer - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
DynamicStringSetParameter - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Parameter that acts as dynamic enum where a set of items can be selected Use DynamicEnumParameterSettings to define a supplier for the items.
DynamicStringSetParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.DynamicStringSetParameter
 
DynamicStringSetParameter(DynamicStringSetParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.DynamicStringSetParameter
 
DynamicStringSetParameter(Set<String>) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.DynamicStringSetParameter
 

E

EasyInstallExternalEnvironmentInstaller<T extends JIPipeEnvironment> - Class in org.hkijena.jipipe.api.environments
Environment installer that extracts a premade package of the environment and generates the appropriate environment Supported are .tar.gz and .zip archives that should contain the hierarchy of files as expected in the environment installation directory.
EasyInstallExternalEnvironmentInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstaller
 
EasyInstallExternalEnvironmentInstallerDialog - Class in org.hkijena.jipipe.api.environments
 
EasyInstallExternalEnvironmentInstallerDialog(EasyInstallExternalEnvironmentInstaller<?>) - Constructor for class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerDialog
 
EasyInstallExternalEnvironmentInstallerPackage - Class in org.hkijena.jipipe.api.environments
 
EasyInstallExternalEnvironmentInstallerPackage() - Constructor for class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
EasyInstallExternalEnvironmentInstallerPackage.Serializer - Class in org.hkijena.jipipe.api.environments
 
Edge() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.layout.MSTGraphAutoLayoutMethod.Edge
 
edgeAdded(GraphEdgeChangeEvent<V, E>) - Method in class org.hkijena.jipipe.utils.WeakPredecessorInspector
 
EdgeCandidate(FilamentVertex, FilamentVertex, double) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm.EdgeCandidate
 
EdgeCandidate(FilamentVertex, FilamentVertex, double) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm.EdgeCandidate
 
EdgeFeature - Class in org.hkijena.jipipe.extensions.ijtrackmate.parameters
 
EdgeFeature() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.EdgeFeature
 
EdgeFeature(EdgeFeature) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.EdgeFeature
 
EdgeFeature(String) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.EdgeFeature
 
EdgeFeature.Deserializer - Class in org.hkijena.jipipe.extensions.ijtrackmate.parameters
 
EdgeFilter3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.features
 
EdgeFilter3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.features.EdgeFilter3DAlgorithm
 
EdgeFilter3DAlgorithm(EdgeFilter3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.features.EdgeFilter3DAlgorithm
 
EdgeMaskParameter - Class in org.hkijena.jipipe.extensions.ijfilaments.parameters
 
EdgeMaskParameter() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.parameters.EdgeMaskParameter
 
EdgeMaskParameter(EdgeMaskParameter) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.parameters.EdgeMaskParameter
 
edgeRemoved(GraphEdgeChangeEvent<V, E>) - Method in class org.hkijena.jipipe.utils.WeakPredecessorInspector
 
edgesFromJson(JsonNode, JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
edgeToRoiLine(FilamentEdge, int, int, int, int) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
EditAlgorithmSlotPanel - Class in org.hkijena.jipipe.ui.components
UI that edits an existing algorithm slot
EditAlgorithmSlotPanel(JIPipeDataSlot, JIPipeHistoryJournal) - Constructor for class org.hkijena.jipipe.ui.components.EditAlgorithmSlotPanel
Creates a new instance
editRuntimePartition(JIPipeWorkbench, JIPipeRuntimePartition) - Static method in class org.hkijena.jipipe.ui.settings.JIPipeRuntimePartitionListEditor
 
EigenvalueSelection2D - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.parameters
Available options to which Eigenvalue to select This is for 2D eigenvalues where two images are generated
ElementAccessOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
ElementAccessOperator(String, int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.ElementAccessOperator
 
EllipseMaskDrawer2DTool - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer
Ellipse drawing Allows left-click canvas dragging
EllipseMaskDrawer2DTool(MaskDrawerPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.EllipseMaskDrawer2DTool
 
emit(Event) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter
 
emitNodeSlotsChangedEvent() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Triggers an event that indicates that the slots have changed
emitParameterChangedEvent(String) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection
emitParameterStructureChangedEvent() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection
emitParameterUIChangedEvent() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection
EmptyImageJ2OutOfBoundsFactory - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds
 
EmptyImageJ2OutOfBoundsFactory() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.EmptyImageJ2OutOfBoundsFactory
 
EmptyImageJ2OutOfBoundsFactory(EmptyImageJ2OutOfBoundsFactory) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.EmptyImageJ2OutOfBoundsFactory
 
EmptyImageJ2ShapeData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.shapes
 
EmptyImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.EmptyImageJ2ShapeData
 
EmptyImageJ2ShapeData(EmptyImageJ2ShapeData) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.EmptyImageJ2ShapeData
 
EmptyImageJDataExporter - Class in org.hkijena.jipipe.api.compat
An exporter that does nothing
EmptyImageJDataExporter() - Constructor for class org.hkijena.jipipe.api.compat.EmptyImageJDataExporter
 
EmptyImageJDataExporterUI - Class in org.hkijena.jipipe.api.compat
Default implementation of an ImageJ data exporter UI
EmptyImageJDataExporterUI(JIPipeWorkbench, ImageJDataExportOperation) - Constructor for class org.hkijena.jipipe.api.compat.EmptyImageJDataExporterUI
 
EmptyImageJDataImporter - Class in org.hkijena.jipipe.api.compat
An importer that does nothing
EmptyImageJDataImporter() - Constructor for class org.hkijena.jipipe.api.compat.EmptyImageJDataImporter
 
EmptyImageJDataImporterUI - Class in org.hkijena.jipipe.api.compat
Default implementation of an ImageJ data importer UI
EmptyImageJDataImporterUI(JIPipeWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.api.compat.EmptyImageJDataImporterUI
 
EnableNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
EnableNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableNodeUIContextAction
 
EnablePassThroughNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
EnablePassThroughNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnablePassThroughNodeUIContextAction
 
EnableSaveOutputsNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
EnableSaveOutputsNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableSaveOutputsNodeUIContextAction
 
EnableVirtualOutputsNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
EnableVirtualOutputsNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableVirtualOutputsNodeUIContextAction
 
endModificationBlock() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Ends a modification block started by beginModificationBlock().
enqueue(JIPipeDataItemStore, int, int) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue
 
enqueue(JIPipeRunnable) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
Schedules a new runnable
EnqueuedEvent(JIPipeRunnable, JIPipeRunWorker) - Constructor for class org.hkijena.jipipe.api.JIPipeRunnable.EnqueuedEvent
 
EnqueuedEventEmitter() - Constructor for class org.hkijena.jipipe.api.JIPipeRunnable.EnqueuedEventEmitter
 
enqueueProject(JIPipeProject, Path, int) - Static method in class org.hkijena.jipipe.JIPipe
Runs a project in a different thread.
enqueueProject(JIPipeProject, JIPipeGraphRunConfiguration) - Static method in class org.hkijena.jipipe.JIPipe
Runs a project in the current thread.
ensureComposite() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
ensureEmptyFolder(Component, Path) - Static method in class org.hkijena.jipipe.utils.PathUtils
Ensures that the path exists and is empty
ensureEqualSize(ImagePlus, ImagePlus, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Applies copy-scaling to ensure that the target image has the same size as the reference image Will silently drop slices that are outside the range of the reference image
ensureExactValue(boolean) - Method in class org.hkijena.jipipe.extensions.expressions.NumericFunctionExpression
Modifies the expression to 0 or x depending on whether an exact value should be set
ensureExtension(Path, String, String...) - Static method in class org.hkijena.jipipe.utils.PathUtils
Ensures that the file name of the path has one of the provided extensions
ensureInstance() - Static method in class org.hkijena.jipipe.JIPipe
Ensures that JIPipe is initialized and available.
ensureInstance(Context) - Static method in class org.hkijena.jipipe.JIPipe
Ensures that JIPipe is initialized and available.
ensureParentDirectoriesExist(Path) - Static method in class org.hkijena.jipipe.utils.PathUtils
Ensures that the parent directories of the path exist.
ensureSize(ImagePlus, int, int, int, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Returns an image that has the specified size by copying
Entry() - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByProjectPaths.Entry
 
Entry() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm.Entry
 
Entry(AnnotateOMEWithMetadataAlgorithm.Entry) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm.Entry
 
Entry() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm.Entry
 
Entry(OMEMetadataToTableAlgorithm.Entry) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm.Entry
 
Entry() - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.json.AnnotateWithJsonDataAlgorithm.Entry
 
Entry(AnnotateWithJsonDataAlgorithm.Entry) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.json.AnnotateWithJsonDataAlgorithm.Entry
 
Entry() - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.json.ExtractJsonDataAsTableAlgorithm.Entry
 
Entry(ExtractJsonDataAsTableAlgorithm.Entry) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.json.ExtractJsonDataAsTableAlgorithm.Entry
 
Entry() - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.text.AnnotateWithTextDataAlgorithm.Entry
 
Entry(AnnotateWithTextDataAlgorithm.Entry) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.text.AnnotateWithTextDataAlgorithm.Entry
 
Entry() - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.text.TextDataToTableAlgorithm.Entry
 
Entry(TextDataToTableAlgorithm.Entry) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.text.TextDataToTableAlgorithm.Entry
 
Entry() - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.xml.AnnotateWithXPathDataAlgorithm.Entry
 
Entry(AnnotateWithXPathDataAlgorithm.Entry) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.xml.AnnotateWithXPathDataAlgorithm.Entry
 
Entry() - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm.Entry
 
Entry(ExtractXPathDataAsTableAlgorithm.Entry) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm.Entry
 
Entry() - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2.Entry
 
Entry(ApplyExpressionPerRowAlgorithm2.Entry) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2.Entry
 
EntryRankingFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderUI.EntryRankingFunction
 
EntryRenderer() - Constructor for class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderUI.EntryRenderer
 
EntryToStringFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderUI.EntryToStringFunction
 
EnumFormData - Class in org.hkijena.jipipe.extensions.forms.datatypes
 
EnumFormData() - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.EnumFormData
 
EnumFormData(EnumFormData) - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.EnumFormData
 
EnumFormGeneratorAlgorithm - Class in org.hkijena.jipipe.extensions.forms.algorithms.generators
 
EnumFormGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.generators.EnumFormGeneratorAlgorithm
 
EnumFormGeneratorAlgorithm(EnumFormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.generators.EnumFormGeneratorAlgorithm
 
EnumItemInfo - Interface in org.hkijena.jipipe.extensions.parameters.api.enums
Used by EnumParameterEditorUI to extract icons and other information for its enum value
EnumParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.api.enums
A parameter editor UI that works for all enumerations
EnumParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterEditorUI
 
EnumParameterEditorUI.Renderer - Class in org.hkijena.jipipe.extensions.parameters.api.enums
Renders items in enum parameters
EnumParameterGenerator - Class in org.hkijena.jipipe.extensions.parameters.api.enums
 
EnumParameterGenerator() - Constructor for class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterGenerator
 
EnumParameterSettings - Annotation Type in org.hkijena.jipipe.extensions.parameters.api.enums
EnumParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.api.enums
Helper class to register Enum parameters
EnumParameterTypeInfo(String, Class<? extends Enum<?>>, String, String) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterTypeInfo
 
ENVIRONMENT_ID - Static variable in class org.hkijena.jipipe.extensions.python.adapter.JIPipePythonAdapterLibraryEnvironment
 
ENVIRONMENT_ID - Static variable in class org.hkijena.jipipe.extensions.python.PythonEnvironment
 
ENVIRONMENT_ID - Static variable in class org.hkijena.jipipe.extensions.r.REnvironment
 
environmentSettingsAreValid() - Static method in class org.hkijena.jipipe.extensions.ilastik.IlastikSettings
Checks the Python settings
EnvironmentVariablesSource - Class in org.hkijena.jipipe.utils
 
EnvironmentVariablesSource() - Constructor for class org.hkijena.jipipe.utils.EnvironmentVariablesSource
 
EOL_COMMENT - Static variable in class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
lexical states
EqualityPredicateOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
EqualityPredicateOperator(String, int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.EqualityPredicateOperator
 
equalize(ImagePlus, boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm
 
equalize(ImageProcessor, boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm
Changes the tone curves of images.
equalize(List<ImagePlus>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.CanvasEqualizer
 
equals(Object) - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
Returns true if the name and value are equal
equals(Object) - Method in class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext
 
equals(Object) - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
 
equals(Object) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
equals(Object) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference
 
equals(Object) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
equals(Object) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
equals(Object) - Method in class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceParameter
 
equals(Object) - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionParameterVariableInfo
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm.EdgeCandidate
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm.EdgeCandidate
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.Point3d
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetDescription
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceCube
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndices
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicEnumParameter
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameter
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameter
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameter
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameter
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.auth.PasswordParameter
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.filesystem.FileChooserBookmark
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.images.ImageParameter
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.markup.HTMLText
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRange
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameter
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExporterRef
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImporterRef
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRef
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRef
 
equals(Object) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Tests this renderer for equality with an arbitrary object.
equals(Object) - Method in class org.hkijena.jipipe.utils.data.OwningStore
 
equals(Object) - Method in class org.hkijena.jipipe.utils.data.WeakStore
 
EqualsStringPredicateFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
EqualsStringPredicateFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.EqualsStringPredicateFunction
 
ErodedVolumeFraction3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.binary
 
ErodedVolumeFraction3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.binary.ErodedVolumeFraction3DAlgorithm
 
ErodedVolumeFraction3DAlgorithm(ErodedVolumeFraction3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.binary.ErodedVolumeFraction3DAlgorithm
 
ErodeEndVerticesAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.modify
 
ErodeEndVerticesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ErodeEndVerticesAlgorithm
 
ErodeEndVerticesAlgorithm(ErodeEndVerticesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ErodeEndVerticesAlgorithm
 
error(String) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.JIPipeLogger
 
error(Object, String) - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROToJIPipeLogger
 
error(Object, LogMessage) - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROToJIPipeLogger
 
escapeString(String) - Static method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
Escapes a string, so it can be used within quotes
escapeString(String) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
Escapes a string to be used within Python code Will not add quotes around the string
escapeString(String) - Static method in class org.hkijena.jipipe.utils.scripting.MacroUtils
Escapes a string to be used within macros Will not add quotes around the string
escapeVariable(String) - Static method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
Escapes a variable name into a valid expression
evaluate(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
Runs the expression and returns the result.
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionFunction
Runs the function on given parameters
evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionOperator
Evaluates the operator
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.CreateArrayFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.CreateMapFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.CreatePairArrayFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.FirstIndexOfFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.GetFirstItemFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.GetItemFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.GetItemOrDefaultFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.GetLastItemFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.GetMapKeysFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.GetMapValuesFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.InvertFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.LastIndexOfFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.SliceAfterFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.SliceBeforeFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.SliceFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.SortAscendingArrayFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.SortDescendingArrayFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.SummarizeAnnotationsMapFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.SummarizeMapFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.CreateHSBColorFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.CreateLABColorFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.CreateRGBColorFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.FalseColorsFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.HexToRGBFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.HSBToLABFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.HSBToRGBFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.LABToHSBFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.LABToRGBFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.RGBToHexFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.RGBToHSBFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.RGBToLABFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.ColumnOperationAdapterFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.ContainsStringPredicateFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.control.CaseFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.control.IfElseExprFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.control.IfElseFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.control.SwitchCaseFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.control.SwitchFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.control.SwitchMapFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.control.WhereFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.convert.ToBooleanFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.convert.ToIntegerFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.convert.ToJsonFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.convert.ToNumber2Function
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.convert.ToNumberFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.convert.ToStringFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.CopyNFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.datetime.GetDateDayFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.datetime.GetDateMonthFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.datetime.GetDateYearFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.datetime.GetTimeHoursFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.datetime.GetTimeMinutesFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.datetime.GetTimeSecondsFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.EvaluateFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.ExpressionSequenceFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.filesystem.GetParentDirectoryFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.filesystem.GetPathNameFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.filesystem.IsDirectoryFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.filesystem.IsFileFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.filesystem.PathCombineFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.filesystem.PathExistsFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.ForEachFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.functions.DefineUserFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.functions.EvaluateUserFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.GlobStringPredicateFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.IsNullFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.LengthFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.math.ClampFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.math.DoubleToStringFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.math.IsFiniteFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.math.IsInfiniteFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.math.IsNaNFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.math.PercentageFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.math.RandomFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.math.RoundToDecimalsFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.ParseJsonFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.quantities.QuantityConvertFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.quantities.QuantityGetUnitFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.quantities.QuantityGetValueFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.RemoveDuplicatesFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.RunFunctionFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.scripts.JavaScriptFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.scripts.JythonScriptFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.SequenceFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.AccumulateFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.CumulativeTransformArrayFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.PercentileFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.TransformArrayFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.EqualsStringPredicateFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.ExtractRegexMatchesFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.RegexStringPredicateFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringEndsWithPredicateFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringFirstIndexOfFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringFixFileNameFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringFormatFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringJoinFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringLastIndexOfFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringRegexReplaceFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringReplaceFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringSliceBeforeFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringSliceFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringSplitFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringStartsWithPredicateFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringToLowerCaseFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringToUpperCaseFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringTrimFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringTruncateFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.SummarizeVariablesFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.util.PrintFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.VariableExistsFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.variables.GetVariableFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.variables.GetVariableKeysFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.variables.GetVariablesAsMapFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.variables.GetVariableValuesFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.variables.HasVariableFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.variables.SetMissingVariableFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.variables.SetVariableFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.variables.SetVariableIfFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.variables.SetVariablesFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.vector.VectorAddFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.vector.VectorEuclideanNormFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.vector.VectorManhattanNormFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.vector.VectorMaximumNormFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.vector.VectorMultiplyScalarFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.vector.VectorNormalizeFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.vector.VectorScalarProductFunction
 
evaluate(List<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.functions.vector.VectorSubtractFunction
 
evaluate(String, Object) - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
evaluate(Function, Iterator<Object>, Object) - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
evaluate(Constant, Object) - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
evaluate(Operator, Iterator<Object>, Object) - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
evaluate(Map<Object, Object>, Object) - Method in class org.hkijena.jipipe.extensions.expressions.operators.AdditionFunctionOperator
 
evaluate(Collection<Object>, Object) - Method in class org.hkijena.jipipe.extensions.expressions.operators.AdditionFunctionOperator
 
evaluate(double, double) - Method in class org.hkijena.jipipe.extensions.expressions.operators.AdditionFunctionOperator
 
evaluate(String, String) - Method in class org.hkijena.jipipe.extensions.expressions.operators.AdditionFunctionOperator
 
evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.operators.ContainsOperator
 
evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.operators.ContainsOperator2
 
evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.operators.ElementAccessOperator
 
evaluate(Collection<Object>, Collection<Object>) - Method in class org.hkijena.jipipe.extensions.expressions.operators.EqualityPredicateOperator
 
evaluate(Map<Object, Object>, Map<Object, Object>) - Method in class org.hkijena.jipipe.extensions.expressions.operators.EqualityPredicateOperator
 
evaluate(double, double) - Method in class org.hkijena.jipipe.extensions.expressions.operators.EqualityPredicateOperator
 
evaluate(String, String) - Method in class org.hkijena.jipipe.extensions.expressions.operators.EqualityPredicateOperator
 
evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.operators.GenericOperator
 
evaluate(Map<Object, Object>, Object) - Method in class org.hkijena.jipipe.extensions.expressions.operators.GenericOperator
 
evaluate(Collection<Object>, Object) - Method in class org.hkijena.jipipe.extensions.expressions.operators.GenericOperator
 
evaluate(double, double) - Method in class org.hkijena.jipipe.extensions.expressions.operators.GenericOperator
 
evaluate(String, String) - Method in class org.hkijena.jipipe.extensions.expressions.operators.GenericOperator
 
evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.operators.GenericPredicateOperator
 
evaluate(Collection<Object>, Collection<Object>) - Method in class org.hkijena.jipipe.extensions.expressions.operators.GenericPredicateOperator
 
evaluate(Map<Object, Object>, Map<Object, Object>) - Method in class org.hkijena.jipipe.extensions.expressions.operators.GenericPredicateOperator
 
evaluate(double, double) - Method in class org.hkijena.jipipe.extensions.expressions.operators.GenericPredicateOperator
 
evaluate(String, String) - Method in class org.hkijena.jipipe.extensions.expressions.operators.GenericPredicateOperator
 
evaluate(Collection<Object>, Collection<Object>) - Method in class org.hkijena.jipipe.extensions.expressions.operators.InequalityPredicateOperator
 
evaluate(Map<Object, Object>, Map<Object, Object>) - Method in class org.hkijena.jipipe.extensions.expressions.operators.InequalityPredicateOperator
 
evaluate(double, double) - Method in class org.hkijena.jipipe.extensions.expressions.operators.InequalityPredicateOperator
 
evaluate(String, String) - Method in class org.hkijena.jipipe.extensions.expressions.operators.InequalityPredicateOperator
 
evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.operators.LogicalAndOperator
 
evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.operators.LogicalNotOperator
 
evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.operators.LogicalOrOperator
 
evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.operators.LogicalXOrOperator
 
evaluate(double, double) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericDivideFunctionOperator
 
evaluate(double, double) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericExponentFunctionOperator
 
evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericFunctionOperator
 
evaluate(double, double) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericFunctionOperator
 
evaluate(double, double) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericGreaterThanOrEqualPredicateOperator
 
evaluate(double, double) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericGreaterThanPredicateOperator
 
evaluate(double, double) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericLessThanOrEqualPredicateOperator
 
evaluate(double, double) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericLessThanPredicateOperator
 
evaluate(double, double) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericModuloFunctionOperator
 
evaluate(double, double) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericMultiplyFunctionOperator
 
evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericOrStringFunctionOperator
 
evaluate(double, double) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericOrStringFunctionOperator
 
evaluate(String, String) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericOrStringFunctionOperator
 
evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericPredicateOperator
 
evaluate(double, double) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericPredicateOperator
 
evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.operators.PairOperator
 
evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.operators.ResolveVariableOperator
 
evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.operators.StatementOperator
 
evaluate(Map<Object, Object>, Object) - Method in class org.hkijena.jipipe.extensions.expressions.operators.SubtractionFunctionOperator
 
evaluate(Collection<Object>, Object) - Method in class org.hkijena.jipipe.extensions.expressions.operators.SubtractionFunctionOperator
 
evaluate(double, double) - Method in class org.hkijena.jipipe.extensions.expressions.operators.SubtractionFunctionOperator
 
evaluate(String, String) - Method in class org.hkijena.jipipe.extensions.expressions.operators.SubtractionFunctionOperator
 
evaluate(Iterator<Object>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.operators.VariableExistsOperator
 
evaluate(MetadataRetrieve) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OMEAccessorParameter
 
evaluate() - Method in class org.hkijena.jipipe.utils.ui.ExpressionTesterUI
 
EvaluateFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
EvaluateFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.EvaluateFunction
 
evaluateToBoolean(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
Runs the expression and returns the boolean result.
evaluateToColor(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
Runs the expression and returns a color result.
evaluateToDouble(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
Runs the expression and returns the numeric result.
evaluateToDoubleList(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
Runs the expression and returns the numeric result.
evaluateToFloat(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
Runs the expression and returns the numeric result.
evaluateToInteger(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
Runs the expression and returns the numeric result.
evaluateToIntegerSafe(JIPipeExpressionVariablesMap, int) - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
Runs the expression and returns the numeric result.
evaluateToNumber(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
Runs the expression and returns the numeric result.
evaluateToString(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
Runs the expression and returns the string result.
evaluateToString(MetadataRetrieve) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OMEAccessorParameter
 
EvaluateUserFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.functions
 
EvaluateUserFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.functions.EvaluateUserFunction
 
executePostprocess() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstaller
Postprocessing steps (optional) that are executed after the extraction of the archive
executePostprocess() - Method in class org.hkijena.jipipe.extensions.cellpose.installers.CellposeEasyInstaller
 
executePostprocess() - Method in class org.hkijena.jipipe.extensions.ilastik.installers.IlastikEasyInstaller
 
executePostprocess() - Method in class org.hkijena.jipipe.extensions.omnipose.installers.OmniposeEasyInstaller
 
executePostprocess() - Method in class org.hkijena.jipipe.extensions.python.installers.PythonEasyInstaller
 
executePostprocess() - Method in class org.hkijena.jipipe.extensions.r.installers.REasyInstaller
 
executeQuickRun(boolean, boolean, boolean, boolean, boolean, boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties.JIPipePipelineSingleAlgorithmSelectionPanelUI
Activates and runs the quick run as automatically as possible.
executeQuickRun(boolean, boolean, boolean, boolean, boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.properties.JIPipeSingleCompartmentSelectionPanelUI
Activates and runs the quick run as automatically as possible.
executeScheduledRegisterExamples() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
 
executeScheduledRegisterTemplates() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
 
ExistingCompartmentDatabaseEntry - Class in org.hkijena.jipipe.api.nodes.database
 
ExistingCompartmentDatabaseEntry(String, JIPipeProjectCompartment) - Constructor for class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
ExistingPipelineNodeDatabaseEntry - Class in org.hkijena.jipipe.api.nodes.database
 
ExistingPipelineNodeDatabaseEntry(String, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
exists(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage
 
exists(String) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage
Returns true if the storage contains given element
exists(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage
Returns true if the storage contains given element
exists(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage
 
exists() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
exists() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
exists() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
exists() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
exists() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry
 
exitLater(int) - Static method in class org.hkijena.jipipe.JIPipe
Exits the Java application in 500ms Prevents the lockup of Java under certain circumstances
exitValue() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree
 
expandAllTree(JTree) - Static method in class org.hkijena.jipipe.utils.UIUtils
Expands the whole tree
expandImage(ImageProcessor, int, int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.CanvasEqualizer
 
expandImage(ImageProcessor, int, int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm
 
expandImageCanvas(ImagePlus, Color, int, int, Anchor) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Expands the canvas of an image
expandImageProcessorCanvas(ImageProcessor, Color, int, int, int, int) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
expandImageStackCanvas(ImageStack, Color, int, int, int, int) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
ExpandLabelsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
ExpandLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ExpandLabelsAlgorithm
 
ExpandLabelsAlgorithm(ExpandLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ExpandLabelsAlgorithm
 
expandLeftTop(int, int) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Expands the canvas by moving all algorithms.
expandRightBottom(int, int) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Expands the canvas
expandStack(ImageStack, int, int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.CanvasEqualizer
 
expandStack(ImageStack, int, int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm
 
ExpColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a exponential (base e) function
ExpColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.ExpColumnOperation
 
ExplodeRoi3DListAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split
 
ExplodeRoi3DListAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.ExplodeRoi3DListAlgorithm
Instantiates a new node type.
ExplodeRoi3DListAlgorithm(ExplodeRoi3DListAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.ExplodeRoi3DListAlgorithm
Instantiates a new node type.
ExplodeRoiAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.split
Wrapper around RoiManager
ExplodeRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.split.ExplodeRoiAlgorithm
Instantiates a new node type.
ExplodeRoiAlgorithm(ExplodeRoiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.split.ExplodeRoiAlgorithm
Instantiates a new node type.
exportAllSlicesToPNG() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
ExportCompartmentAsJsonNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
ExportCompartmentAsJsonNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ExportCompartmentAsJsonNodeUIContextAction
 
ExportCompartmentToNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
ExportCompartmentToNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ExportCompartmentToNodeUIContextAction
 
exportCurrentSliceToPNG() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compartments.datatypes.JIPipeCompartmentOutputData
 
exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compat.DataTableImageJDataExporter
 
exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compat.EmptyImageJDataExporter
 
exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.compat.ImageJDataExporter
Converts a JIPipe data type to its corresponding ImageJ data type
exportData(JIPipeData, ImageJExportParameters, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.compat.ImageJDataExporter
Converts a JIPipe data type to its corresponding ImageJ data type
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.data.JIPipeData
Saves the data to a folder
exportData(JIPipeWriteDataStorage, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Saves the data contained in this slot into the storage path.
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeEmptyData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeEmptyThumbnailData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeSerializedJsonObjectData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeWeakDataReferenceData
 
exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.cellpose.compat.CellposeModelImageJExporter
 
exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.cellpose.compat.CellposeSizeModelImageJExporter
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeModelData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeSizeModelData
 
exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.clij2.compat.CLIIJ2DataToImageWindowImageJExporter
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageData
 
ExportData - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
 
ExportData(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportData
 
ExportData(ExportData) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportData
 
exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.compat.PathDataToTableImageJExporter
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.dataypes.PathData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.FormData
 
exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.compat.ROI3DImageJExporter
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.ModelData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotDetectorData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotTrackerData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijweka.datatypes.WekaModelData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ilastik.datatypes.IlastikModelData
 
exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.compat.IJ2DataToImageWindowImageJExporter
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.ImageJ2DatasetData
 
exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ImagePlusDataToImageWindowImageJExporter
 
exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.OMEImageToImageWindowImageJExporter
 
exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.RoiManagerImageJExporter
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFTData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.LUTData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.OMEImageData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.multiparameters.datatypes.ParametersData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROAnnotationReferenceData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMERODatasetReferenceData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROGroupReferenceData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROImageReferenceData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROProjectReferenceData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.StringData
 
exportData(JIPipeDataTable, ImageJExportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.compat.ResultsTableDataImageJExporter
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.DoubleArrayTableColumn
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.FloatArrayTableColumn
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RelabeledTableColumn
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RowIndexTableColumn
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.StringArrayTableColumn
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ZeroTableColumn
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.TableColumnReference
 
exportData(JIPipeWriteDataStorage, String, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.datatypes.JIPipeOutputData
 
ExportDataByParameter - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
 
ExportDataByParameter(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter
 
ExportDataByParameter(ExportDataByParameter) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter
 
ExportDataByParameter2 - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
 
ExportDataByParameter2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter2
 
ExportDataByParameter2(ExportDataByParameter2) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter2
 
exportDataRow_(JIPipeWriteDataStorage, int, List<Dimension>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
NOT THREAD-SAFE
ExportDataTable - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
 
ExportDataTable(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataTable
 
ExportDataTable(ExportDataTable) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataTable
 
ExportDataTableByParameter - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
 
ExportDataTableByParameter(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataTableByParameter
 
ExportDataTableByParameter(ExportDataTableByParameter) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataTableByParameter
 
ExportIlastikHDF5ImageAlgorithm - Class in org.hkijena.jipipe.extensions.ilastik.nodes
 
ExportIlastikHDF5ImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.ExportIlastikHDF5ImageAlgorithm
 
ExportIlastikHDF5ImageAlgorithm(ExportIlastikHDF5ImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.ExportIlastikHDF5ImageAlgorithm
 
ExportImage2Algorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
 
ExportImage2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImage2Algorithm
 
ExportImage2Algorithm(ExportImage2Algorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImage2Algorithm
 
ExportImageAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
Deprecated.
ExportImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
ExportImageAlgorithm(ExportImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
ExportImageAlgorithm.FileFormat - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
Deprecated.
 
ExportImageDirectorySlotAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
 
ExportImageDirectorySlotAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm
 
ExportImageDirectorySlotAlgorithm(ExportImageDirectorySlotAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm
 
ExportImpImageAlgorithm - Class in org.hkijena.jipipe.extensions.imp.nodes
 
ExportImpImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imp.nodes.ExportImpImageAlgorithm
 
ExportImpImageAlgorithm(ExportImpImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imp.nodes.ExportImpImageAlgorithm
 
ExportNodeJsonsTool - Class in org.hkijena.jipipe.extensions.dev
 
ExportNodeJsonsTool(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.dev.ExportNodeJsonsTool
Creates a new instance
ExportNodeParameterJsonsTool - Class in org.hkijena.jipipe.extensions.dev
 
ExportNodeParameterJsonsTool(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.dev.ExportNodeParameterJsonsTool
Creates a new instance
ExportNodeSignatureJsonsTool - Class in org.hkijena.jipipe.extensions.dev
 
ExportNodeSignatureJsonsTool(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.dev.ExportNodeSignatureJsonsTool
Creates a new instance
ExportNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories
 
ExportNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory
 
ExportNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
ExportNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ExportNodeUIContextAction
 
exportOutputToImageJ(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration
Extracts algorithm output into ImageJ.
exportResourceToFile(String, Path) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
Saves a resource as file
ExportROI3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d
Deprecated.
ExportROI3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.ExportROI3DAlgorithm
Deprecated.
 
ExportROI3DAlgorithm(ExportROI3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.ExportROI3DAlgorithm
Deprecated.
 
ExportROI3DAlgorithm2 - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d
 
ExportROI3DAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.ExportROI3DAlgorithm2
 
ExportROI3DAlgorithm2(ExportROI3DAlgorithm2) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.ExportROI3DAlgorithm2
 
ExportROIAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
Deprecated.
ExportROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportROIAlgorithm
Deprecated.
 
ExportROIAlgorithm(ExportROIAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportROIAlgorithm
Deprecated.
 
ExportROIAlgorithm2 - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
 
ExportROIAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportROIAlgorithm2
 
ExportROIAlgorithm2(ExportROIAlgorithm2) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportROIAlgorithm2
 
exportROIsToManager(ROIListData) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
exportROIsToManager() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
exportROIsToManager(ROIListData) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
ExportScene3DToColladaAlgorithm - Class in org.hkijena.jipipe.extensions.scene3d.nodes
Deprecated.
ExportScene3DToColladaAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.scene3d.nodes.ExportScene3DToColladaAlgorithm
Deprecated.
 
ExportScene3DToColladaAlgorithm(ExportScene3DToColladaAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.scene3d.nodes.ExportScene3DToColladaAlgorithm
Deprecated.
 
ExportScene3DToColladaAlgorithm2 - Class in org.hkijena.jipipe.extensions.scene3d.nodes
 
ExportScene3DToColladaAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.scene3d.nodes.ExportScene3DToColladaAlgorithm2
 
ExportScene3DToColladaAlgorithm2(ExportScene3DToColladaAlgorithm2) - Constructor for class org.hkijena.jipipe.extensions.scene3d.nodes.ExportScene3DToColladaAlgorithm2
 
ExportTableAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
Deprecated.
ExportTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm
Deprecated.
 
ExportTableAlgorithm(ExportTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm
Deprecated.
 
ExportTableAlgorithm.FileFormat - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
Deprecated.
 
ExportTableAlgorithm2 - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
 
ExportTableAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm2
 
ExportTableAlgorithm2(ExportTableAlgorithm2) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm2
 
ExportTableAsXLSXAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
Deprecated.
ExportTableAsXLSXAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm
Deprecated.
 
ExportTableAsXLSXAlgorithm(ExportTableAsXLSXAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm
Deprecated.
 
ExportTableAsXLSXAlgorithm2 - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
 
ExportTableAsXLSXAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2
 
ExportTableAsXLSXAlgorithm2(ExportTableAsXLSXAlgorithm2) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2
 
exportThumbnails(JIPipeWriteDataStorage, Path, List<Dimension>, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.data.JIPipeData
Exports the thumbnails/previews of this data into the provided storage
exportVideo() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
EXPRESSION_PARAMETER_VARIABLES - Static variable in class org.hkijena.jipipe.api.nodes.JIPipeCustomAnnotationMatchingExpressionVariables
 
ExpressionAndExpressionPairParameter - Class in org.hkijena.jipipe.extensions.parameters.library.pairs
A parameter that renames an integer into another integer
ExpressionAndExpressionPairParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.ExpressionAndExpressionPairParameter
Creates a new instance
ExpressionAndExpressionPairParameter(ExpressionAndExpressionPairParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.ExpressionAndExpressionPairParameter
Creates a copy
ExpressionAndExpressionPairParameter.List - Class in org.hkijena.jipipe.extensions.parameters.library.pairs
A collection of multiple ExpressionAndExpressionPairParameter
ExpressionBuilderInserterUI - Class in org.hkijena.jipipe.extensions.expressions.ui
 
ExpressionBuilderInserterUI(ExpressionBuilderUI, Object) - Constructor for class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderInserterUI
 
ExpressionBuilderParameterUI - Class in org.hkijena.jipipe.extensions.expressions.ui
A parameter UI for the expression builder.
ExpressionBuilderParameterUI() - Constructor for class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderParameterUI
 
ExpressionBuilderParameterUI.Mode - Enum in org.hkijena.jipipe.extensions.expressions.ui
 
ExpressionBuilderSyntaxChecker - Class in org.hkijena.jipipe.extensions.expressions.ui
 
ExpressionBuilderSyntaxChecker(RSyntaxTextArea) - Constructor for class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderSyntaxChecker
 
ExpressionBuilderUI - Class in org.hkijena.jipipe.extensions.expressions.ui
 
ExpressionBuilderUI(String, Set<JIPipeExpressionParameterVariableInfo>) - Constructor for class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderUI
 
ExpressionBuilderUI.EntryRankingFunction - Class in org.hkijena.jipipe.extensions.expressions.ui
 
ExpressionBuilderUI.EntryRenderer - Class in org.hkijena.jipipe.extensions.expressions.ui
 
ExpressionBuilderUI.EntryToStringFunction - Class in org.hkijena.jipipe.extensions.expressions.ui
 
ExpressionConstant - Class in org.hkijena.jipipe.extensions.expressions
 
ExpressionConstant(String, Object) - Constructor for class org.hkijena.jipipe.extensions.expressions.ExpressionConstant
 
ExpressionConstantEntry - Class in org.hkijena.jipipe.extensions.expressions
Organizes Operator instances and puts them together with a name and description
ExpressionConstantEntry(Constant) - Constructor for class org.hkijena.jipipe.extensions.expressions.ExpressionConstantEntry
 
ExpressionConstantEntry(String, String, Constant) - Constructor for class org.hkijena.jipipe.extensions.expressions.ExpressionConstantEntry
 
ExpressionEvaluator - Class in org.hkijena.jipipe.extensions.expressions
The base class for an evaluator
ExpressionEvaluator(Parameters) - Constructor for class org.hkijena.jipipe.extensions.expressions.ExpressionEvaluator
Constructor.
ExpressionFunction - Class in org.hkijena.jipipe.extensions.expressions
Function that can be utilized in JIPipeExpressionEvaluator.
ExpressionFunction(String, int) - Constructor for class org.hkijena.jipipe.extensions.expressions.ExpressionFunction
 
ExpressionFunction(String, int, int) - Constructor for class org.hkijena.jipipe.extensions.expressions.ExpressionFunction
 
ExpressionFunctionEntry(String, String, String, ExpressionFunction) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ExpressionFunctionEntry
 
ExpressionFunctionRenderer() - Constructor for class org.hkijena.jipipe.extensions.expressions.FunctionSelectorList.ExpressionFunctionRenderer
 
ExpressionOperator - Class in org.hkijena.jipipe.extensions.expressions
 
ExpressionOperator(String, int, Operator.Associativity, int) - Constructor for class org.hkijena.jipipe.extensions.expressions.ExpressionOperator
 
ExpressionOperatorEntry - Class in org.hkijena.jipipe.extensions.expressions
Organizes Operator instances and puts them together with a name and description
ExpressionOperatorEntry(Operator) - Constructor for class org.hkijena.jipipe.extensions.expressions.ExpressionOperatorEntry
 
ExpressionOperatorEntry(String, String, Operator) - Constructor for class org.hkijena.jipipe.extensions.expressions.ExpressionOperatorEntry
 
ExpressionOperatorRenderer() - Constructor for class org.hkijena.jipipe.extensions.expressions.OperatorSelectorList.ExpressionOperatorRenderer
 
ExpressionParameterVariablesInfo - Interface in org.hkijena.jipipe.extensions.expressions
Provides the list of available variables.
ExpressionPlugin - Class in org.hkijena.jipipe.extensions.expressions
 
ExpressionPlugin() - Constructor for class org.hkijena.jipipe.extensions.expressions.ExpressionPlugin
 
ExpressionSequenceFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
ExpressionSequenceFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.ExpressionSequenceFunction
 
ExpressionSlicerAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions
 
ExpressionSlicerAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
ExpressionSlicerAlgorithm(ExpressionSlicerAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
ExpressionTableColumnGeneratorProcessor - Class in org.hkijena.jipipe.extensions.tables.parameters.processors
Processor-like parameter that maps a column generator to a string
ExpressionTableColumnGeneratorProcessor() - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.processors.ExpressionTableColumnGeneratorProcessor
Creates a new instance
ExpressionTableColumnGeneratorProcessor(String, String) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.processors.ExpressionTableColumnGeneratorProcessor
 
ExpressionTableColumnGeneratorProcessor(ExpressionTableColumnGeneratorProcessor) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.processors.ExpressionTableColumnGeneratorProcessor
Creates a copy
ExpressionTableColumnGeneratorProcessorParameterList - Class in org.hkijena.jipipe.extensions.tables.parameters.collections
 
ExpressionTableColumnGeneratorProcessorParameterList() - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.collections.ExpressionTableColumnGeneratorProcessorParameterList
Creates a new instance
ExpressionTableColumnGeneratorProcessorParameterList(ExpressionTableColumnGeneratorProcessorParameterList) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.collections.ExpressionTableColumnGeneratorProcessorParameterList
Creates a copy
ExpressionTableColumnProcessorParameter - Class in org.hkijena.jipipe.extensions.tables.parameters.processors
A parameter that models processing an input column via an conversion function and generating an output column
ExpressionTableColumnProcessorParameter() - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.processors.ExpressionTableColumnProcessorParameter
 
ExpressionTableColumnProcessorParameter(ExpressionTableColumnProcessorParameter) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.processors.ExpressionTableColumnProcessorParameter
 
ExpressionTableColumnProcessorParameterList - Class in org.hkijena.jipipe.extensions.tables.parameters.collections
 
ExpressionTableColumnProcessorParameterList() - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.collections.ExpressionTableColumnProcessorParameterList
Creates a new instance
ExpressionTableColumnProcessorParameterList(ExpressionTableColumnProcessorParameterList) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.collections.ExpressionTableColumnProcessorParameterList
Creates a copy
ExpressionTesterJIPipeMenuExtension - Class in org.hkijena.jipipe.extensions.parameters
Adds an entry "New table" to the JIPipe menu
ExpressionTesterJIPipeMenuExtension(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.parameters.ExpressionTesterJIPipeMenuExtension
Creates a new instance
ExpressionTesterUI - Class in org.hkijena.jipipe.utils.ui
A developer tool to test JIPipeExpressionEvaluator
ExpressionTesterUI(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.utils.ui.ExpressionTesterUI
 
ExpressionVariableRenderer() - Constructor for class org.hkijena.jipipe.extensions.expressions.VariableSelectorList.ExpressionVariableRenderer
 
ExtendedDataTableSearchTextFieldTableRowFilter - Class in org.hkijena.jipipe.ui.components.search
Filters entries via a SearchTextField that can contain search keys, but also a filter expression to filter specific columns.
ExtendedDataTableSearchTextFieldTableRowFilter(SearchTextField) - Constructor for class org.hkijena.jipipe.ui.components.search.ExtendedDataTableSearchTextFieldTableRowFilter
 
ExtendedExecutor(long, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.utils.ProcessUtils.ExtendedExecutor
 
ExtendedHTMLEditorKit - Class in org.hkijena.jipipe.ui.components.html
ExtendedHTMLEditorKit() - Constructor for class org.hkijena.jipipe.ui.components.html.ExtendedHTMLEditorKit
 
ExtendedImageView - Class in org.hkijena.jipipe.ui.components.html
ImageView capable of decoding Base64 images See ...
ExtendedImageView(Element) - Constructor for class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Creates a new view that represents an IMG element.
ExtendedMaxima2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local
 
ExtendedMaxima2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMaxima2DAlgorithm
Instantiates a new node type.
ExtendedMaxima2DAlgorithm(ExtendedMaxima2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMaxima2DAlgorithm
Instantiates a new node type.
ExtendedMaxima3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local
 
ExtendedMaxima3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMaxima3DAlgorithm
Instantiates a new node type.
ExtendedMaxima3DAlgorithm(ExtendedMaxima3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMaxima3DAlgorithm
Instantiates a new node type.
ExtendedMinima2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local
 
ExtendedMinima2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMinima2DAlgorithm
Instantiates a new node type.
ExtendedMinima2DAlgorithm(ExtendedMinima2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMinima2DAlgorithm
Instantiates a new node type.
ExtendedMinima3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local
 
ExtendedMinima3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMinima3DAlgorithm
Instantiates a new node type.
ExtendedMinima3DAlgorithm(ExtendedMinima3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMinima3DAlgorithm
Instantiates a new node type.
ExtendedObject3DVoxels - Class in org.hkijena.jipipe.extensions.ij3d.utils
Extended version of Object3DVoxels that comes with some additional loading methods
ExtendedObject3DVoxels() - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ExtendedObject3DVoxels
 
ExtendedObject3DVoxels(int) - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ExtendedObject3DVoxels
 
ExtendedObject3DVoxels(ImageHandler, int) - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ExtendedObject3DVoxels
 
ExtendedObject3DVoxels(ImageHandler) - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ExtendedObject3DVoxels
 
ExtendedObject3DVoxels(ImageHandler, ImageHandler) - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ExtendedObject3DVoxels
 
ExtendedObject3DVoxels(ImagePlus, int) - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ExtendedObject3DVoxels
 
ExtendedObject3DVoxels(ImageStack, int) - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ExtendedObject3DVoxels
 
ExtendedObject3DVoxels(List<Voxel3D>) - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ExtendedObject3DVoxels
 
ExtendedObject3DVoxels(Object3DVoxels) - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ExtendedObject3DVoxels
 
ExtendedObject3DVoxels(Object3D) - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ExtendedObject3DVoxels
 
ExtendedObjectCreator3D - Class in org.hkijena.jipipe.extensions.ij3d.utils
 
ExtendedObjectCreator3D(ImageHandler) - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ExtendedObjectCreator3D
 
ExtendedObjectCreator3D(ImageStack) - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ExtendedObjectCreator3D
 
ExtendedObjectCreator3D(int, int, int) - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ExtendedObjectCreator3D
 
EXTENSION_FILTER_AVI - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_BMP - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_CSV - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_HTML - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_IMAGEIO_IMAGES - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_JIP - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_JIPC - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_JIPE - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_JPEG - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_JSON - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_MD - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_PDF - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_PNG - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_ROI - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_ROI_ZIP - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_ROIS - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_SVG - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_TIFF - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_TSV - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_TXT - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_XLSX - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
EXTENSION_FILTER_ZIP - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
ExtensionAlgorithmCompendiumUI - Class in org.hkijena.jipipe.ui.extensions
 
ExtensionAlgorithmCompendiumUI(JIPipePlugin) - Constructor for class org.hkijena.jipipe.ui.extensions.ExtensionAlgorithmCompendiumUI
 
ExtensionContentAddedEvent(JIPipeJsonPlugin, Object) - Constructor for class org.hkijena.jipipe.JIPipeService.ExtensionContentAddedEvent
 
ExtensionContentAddedEventEmitter() - Constructor for class org.hkijena.jipipe.JIPipeService.ExtensionContentAddedEventEmitter
 
ExtensionContentRemovedEvent(JIPipeJsonPlugin, Object) - Constructor for class org.hkijena.jipipe.JIPipeService.ExtensionContentRemovedEvent
 
ExtensionContentRemovedEventEmitter() - Constructor for class org.hkijena.jipipe.JIPipeService.ExtensionContentRemovedEventEmitter
 
ExtensionDataTypeCompendiumUI - Class in org.hkijena.jipipe.ui.extensions
 
ExtensionDataTypeCompendiumUI(JIPipePlugin) - Constructor for class org.hkijena.jipipe.ui.extensions.ExtensionDataTypeCompendiumUI
 
ExtensionDiscoveredEvent(JIPipe, JIPipeDependency) - Constructor for class org.hkijena.jipipe.JIPipeService.ExtensionDiscoveredEvent
 
ExtensionDiscoveredEventEmitter() - Constructor for class org.hkijena.jipipe.JIPipeService.ExtensionDiscoveredEventEmitter
 
ExtensionInfoPanel - Class in org.hkijena.jipipe.ui.extensions
 
ExtensionInfoPanel(JIPipeModernPluginManagerUI, JIPipePlugin) - Constructor for class org.hkijena.jipipe.ui.extensions.ExtensionInfoPanel
 
ExtensionItemActionButton - Class in org.hkijena.jipipe.ui.extensions
 
ExtensionItemActionButton(JIPipeModernPluginManager, JIPipePlugin) - Constructor for class org.hkijena.jipipe.ui.extensions.ExtensionItemActionButton
 
ExtensionItemLogoPanel - Class in org.hkijena.jipipe.ui.extensions
 
ExtensionItemLogoPanel(JIPipePlugin) - Constructor for class org.hkijena.jipipe.ui.extensions.ExtensionItemLogoPanel
 
ExtensionItemPanel - Class in org.hkijena.jipipe.ui.extensions
 
ExtensionItemPanel(JIPipeModernPluginManagerUI, JIPipePlugin) - Constructor for class org.hkijena.jipipe.ui.extensions.ExtensionItemPanel
 
ExtensionListPanel - Class in org.hkijena.jipipe.ui.extensions
 
ExtensionListPanel(JIPipeModernPluginManagerUI) - Constructor for class org.hkijena.jipipe.ui.extensions.ExtensionListPanel
 
ExtensionRegisteredEvent(JIPipeService, JIPipeDependency) - Constructor for class org.hkijena.jipipe.JIPipeService.ExtensionRegisteredEvent
 
ExtensionRegisteredEventEmitter() - Constructor for class org.hkijena.jipipe.JIPipeService.ExtensionRegisteredEventEmitter
 
ExtensionSettings - Class in org.hkijena.jipipe.extensions.settings
Settings related to how algorithms are executed
ExtensionSettings() - Constructor for class org.hkijena.jipipe.extensions.settings.ExtensionSettings
Creates a new instance
ExternalEditor(JIPipeWorkbench, WeakReference<JIPipeParameterCollection>, String, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameterEditorUI.ExternalEditor
 
ExternalEnvironmentInfo - Annotation Type in org.hkijena.jipipe.api.environments
 
ExternalEnvironmentInstaller - Class in org.hkijena.jipipe.api.environments
Contains instructions to install an environment.
ExternalEnvironmentInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.api.environments.ExternalEnvironmentInstaller
 
ExternalEnvironmentParameterEditorUI - Class in org.hkijena.jipipe.api.environments
 
ExternalEnvironmentParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.api.environments.ExternalEnvironmentParameterEditorUI
Creates new instance
ExternalEnvironmentParameterSettings - Annotation Type in org.hkijena.jipipe.api.environments
Can be attached to control the UI of
ExternalEnvironmentSettings - Interface in org.hkijena.jipipe.api.environments
A settings page that contains basic settings for all external environments.
ExternalFileExternalEditor(JIPipeWorkbench, WeakReference<JIPipeParameterCollection>, String, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameterEditorUI.ExternalFileExternalEditor
 
extract(Collection<JIPipeGraphNode>, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Copies the selected algorithms into a new graph Connections between the nodes are kept UUIDs are kept
extract(Collection<JIPipeGraphNode>, boolean, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Copies the selected algorithms into a new graph Connections between the nodes are kept UUIDs are kept
extractAlpha(BufferedImage) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils
 
ExtractAndReplaceAnnotation - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Generates annotations from filenames
ExtractAndReplaceAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractAndReplaceAnnotation
New instance
ExtractAndReplaceAnnotation(ExtractAndReplaceAnnotation) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractAndReplaceAnnotation
Copies the algorithm
extractAnnotationsFromPython(PyDictionary) - Static method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
Sets annotations from a Python dictionary
extractCellposeOutputs(JIPipeMultiIterationStep, JIPipeProgressInfo, Path, Path, Path, Path, Path, List<JIPipeTextAnnotation>, CellposeSegmentationOutputSettings_Old) - Static method in class org.hkijena.jipipe.extensions.cellpose.CellposeUtils
 
extractCTStack(ImagePlus, int, int) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
ExtractDataAnnotation - Class in org.hkijena.jipipe.extensions.annotation.algorithms
 
ExtractDataAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractDataAnnotation
 
ExtractDataAnnotation(ExtractDataAnnotation) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractDataAnnotation
 
extractDeepCopy(Set<FilamentVertex>) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
Extracts a deep copy of the nodes end edges that only contains the selected vertices
ExtractFileName - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Applies subfolder navigation to each input folder
ExtractFileName(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ExtractFileName
 
ExtractFileName(ExtractFileName) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ExtractFileName
Copies the algorithm
extractFromProcessor(ImageProcessor, Rectangle) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
ExtractFromROIAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble
 
ExtractFromROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
ExtractFromROIAlgorithm(ExtractFromROIAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
ExtractImageInRoiAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi
 
ExtractImageInRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
ExtractImageInRoiAlgorithm(ExtractImageInRoiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
ExtractImageMetadataAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata
 
ExtractImageMetadataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.ExtractImageMetadataAlgorithm
 
ExtractImageMetadataAlgorithm(ExtractImageMetadataAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.ExtractImageMetadataAlgorithm
 
ExtractJsonDataAsTableAlgorithm - Class in org.hkijena.jipipe.extensions.strings.nodes.json
 
ExtractJsonDataAsTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.json.ExtractJsonDataAsTableAlgorithm
 
ExtractJsonDataAsTableAlgorithm(ExtractJsonDataAsTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.json.ExtractJsonDataAsTableAlgorithm
 
ExtractJsonDataAsTableAlgorithm.Entry - Class in org.hkijena.jipipe.extensions.strings.nodes.json
 
ExtractLabelStatisticsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
ExtractLabelStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ExtractLabelStatisticsAlgorithm
 
ExtractLabelStatisticsAlgorithm(ExtractLabelStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ExtractLabelStatisticsAlgorithm
 
extractLoopGroups(Set<JIPipeGraphNode>, Set<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Converts loop structures into equivalent group nodes Please note that nested loops will be put into the group; only order 1 loops will be converted.
extractMergedAnnotations(String) - Static method in enum org.hkijena.jipipe.api.annotation.JIPipeTextAnnotationMergeMode
Extracts merged annotations
ExtractOMEROIAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome
 
ExtractOMEROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.ExtractOMEROIAlgorithm
 
ExtractOMEROIAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.ExtractOMEROIAlgorithm
 
ExtractOMEXMLAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome
 
ExtractOMEXMLAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.ExtractOMEXMLAlgorithm
 
ExtractOMEXMLAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.ExtractOMEXMLAlgorithm
 
extractOutputs(JIPipeSingleIterationStep, Map<String, Path>, List<JIPipeOutputDataSlot>, JIPipeTextAnnotationMergeMode, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
 
extractOutputs(JIPipeMultiIterationStep, Map<String, Path>, List<JIPipeOutputDataSlot>, JIPipeTextAnnotationMergeMode, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
 
extractOutputs(Map<String, Path>, List<JIPipeOutputDataSlot>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
 
ExtractOverlay3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.overlay
 
ExtractOverlay3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.overlay.ExtractOverlay3DAlgorithm
 
ExtractOverlay3DAlgorithm(ExtractOverlay3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.overlay.ExtractOverlay3DAlgorithm
 
ExtractOverlayAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay
 
ExtractOverlayAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.ExtractOverlayAlgorithm
 
ExtractOverlayAlgorithm(ExtractOverlayAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.ExtractOverlayAlgorithm
 
extractOverlaysOfType(Class<T>) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
ExtractParametersAlgorithm - Class in org.hkijena.jipipe.extensions.multiparameters.nodes
 
ExtractParametersAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.ExtractParametersAlgorithm
 
ExtractParametersAlgorithm(ExtractParametersAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.ExtractParametersAlgorithm
 
ExtractParent - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Applies subfolder navigation to each input folder
ExtractParent(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ExtractParent
 
ExtractParent(ExtractParent) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ExtractParent
Copies the algorithm
extractPythonArchive(Path) - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller
Installs Miniconda
ExtractRegexMatchesFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
ExtractRegexMatchesFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.ExtractRegexMatchesFunction
 
extractRestoredAnnotations(JIPipeMultiIterationStep, Map<String, JIPipeTextAnnotation>, JIPipeDataSlot, int, List<JIPipeTextAnnotation>) - Static method in class org.hkijena.jipipe.extensions.forms.algorithms.IteratingFormProcessorAlgorithm
Extracts original annotations into the annotation list
ExtractRoi2DRelationStatisticsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure
 
ExtractRoi2DRelationStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm
 
ExtractRoi2DRelationStatisticsAlgorithm(ExtractRoi2DRelationStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm
 
ExtractROI3DMetadataAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata
 
ExtractROI3DMetadataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.ExtractROI3DMetadataAlgorithm
 
ExtractROI3DMetadataAlgorithm(ExtractROI3DMetadataAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.ExtractROI3DMetadataAlgorithm
 
ExtractRoi3DRelationStatisticsAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure
 
ExtractRoi3DRelationStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm
 
ExtractRoi3DRelationStatisticsAlgorithm(ExtractRoi3DRelationStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm
 
ExtractRoi3DStatisticsAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure
 
ExtractRoi3DStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DStatisticsAlgorithm
 
ExtractRoi3DStatisticsAlgorithm(ExtractRoi3DStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DStatisticsAlgorithm
 
ExtractROIMetadataAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties
 
ExtractROIMetadataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.ExtractROIMetadataAlgorithm
 
ExtractROIMetadataAlgorithm(ExtractROIMetadataAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.ExtractROIMetadataAlgorithm
 
extractShallow(Collection<JIPipeGraphNode>, boolean, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Copies the selected algorithms into a new graph Connections between the nodes are kept UUIDs are kept Nodes are copied shallow
extractShallowCopy(Set<FilamentVertex>) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
Extracts a shallow copy of the nodes end edges that only contains the selected vertices
extractStringFromXPath(Document, String, Map<String, String>) - Static method in class org.hkijena.jipipe.utils.xml.XmlUtils
 
extractStringListFromXPath(Document, String, Map<String, String>) - Static method in class org.hkijena.jipipe.utils.xml.XmlUtils
 
ExtractTableAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms.datatable
 
ExtractTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.datatable.ExtractTableAlgorithm
 
ExtractTableAlgorithm(ExtractTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.datatable.ExtractTableAlgorithm
 
ExtractTemplateZipFileRun - Class in org.hkijena.jipipe.ui
 
ExtractTemplateZipFileRun(JIPipeProjectTemplate, Path) - Constructor for class org.hkijena.jipipe.ui.ExtractTemplateZipFileRun
 
ExtractTextFromJsonAlgorithm - Class in org.hkijena.jipipe.extensions.strings.nodes.json
 
ExtractTextFromJsonAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.json.ExtractTextFromJsonAlgorithm
 
ExtractTextFromJsonAlgorithm(ExtractTextFromJsonAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.json.ExtractTextFromJsonAlgorithm
 
ExtractTextFromXMLAlgorithm - Class in org.hkijena.jipipe.extensions.strings.nodes.xml
 
ExtractTextFromXMLAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractTextFromXMLAlgorithm
 
ExtractTextFromXMLAlgorithm(ExtractTextFromXMLAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractTextFromXMLAlgorithm
 
extractValues(JIPipeExpressionVariablesMap, ImagePlus, Collection<JIPipeTextAnnotation>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImagePlusPropertiesExpressionParameterVariablesInfo
 
ExtractXPathDataAsTableAlgorithm - Class in org.hkijena.jipipe.extensions.strings.nodes.xml
 
ExtractXPathDataAsTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm
 
ExtractXPathDataAsTableAlgorithm(ExtractXPathDataAsTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm
 
ExtractXPathDataAsTableAlgorithm.Entry - Class in org.hkijena.jipipe.extensions.strings.nodes.xml
 

F

FactorizeColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Converts each entry into a factor
FactorizeColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.FactorizeColumnOperation
 
FalseColorsFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.color
 
FalseColorsFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.color.FalseColorsFunction
 
FancyPasswordField - Class in org.hkijena.jipipe.ui.components
A JXTextField with some fancy additions
FancyPasswordField(JLabel) - Constructor for class org.hkijena.jipipe.ui.components.FancyPasswordField
Creates a new instance
FancyTextField - Class in org.hkijena.jipipe.ui.components
A JXTextField with some fancy additions
FancyTextField(JLabel, String, boolean) - Constructor for class org.hkijena.jipipe.ui.components.FancyTextField
Creates a new instance
Fast3DFiltersAdaptiveAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.filters
 
Fast3DFiltersAdaptiveAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersAdaptiveAlgorithm
 
Fast3DFiltersAdaptiveAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersAdaptiveAlgorithm
 
Fast3DFiltersAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.filters
 
Fast3DFiltersAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersAlgorithm
 
Fast3DFiltersAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersAlgorithm
 
Fast3DFiltersCloseAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.filters
 
Fast3DFiltersCloseAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersCloseAlgorithm
 
Fast3DFiltersCloseAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersCloseAlgorithm
 
Fast3DFiltersLocalMaxAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.filters
 
Fast3DFiltersLocalMaxAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersLocalMaxAlgorithm
 
Fast3DFiltersLocalMaxAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersLocalMaxAlgorithm
 
Fast3DFiltersMaxAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.filters
 
Fast3DFiltersMaxAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersMaxAlgorithm
 
Fast3DFiltersMaxAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersMaxAlgorithm
 
Fast3DFiltersMeanAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.filters
 
Fast3DFiltersMeanAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersMeanAlgorithm
 
Fast3DFiltersMeanAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersMeanAlgorithm
 
Fast3DFiltersMedianAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.filters
 
Fast3DFiltersMedianAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersMedianAlgorithm
 
Fast3DFiltersMedianAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersMedianAlgorithm
 
Fast3DFiltersMinAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.filters
 
Fast3DFiltersMinAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersMinAlgorithm
 
Fast3DFiltersMinAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersMinAlgorithm
 
Fast3DFiltersOpenAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.filters
 
Fast3DFiltersOpenAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersOpenAlgorithm
 
Fast3DFiltersOpenAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersOpenAlgorithm
 
Fast3DFiltersSobelAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.filters
 
Fast3DFiltersSobelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersSobelAlgorithm
 
Fast3DFiltersSobelAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersSobelAlgorithm
 
Fast3DFiltersTopHatAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.filters
 
Fast3DFiltersTopHatAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersTopHatAlgorithm
 
Fast3DFiltersTopHatAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersTopHatAlgorithm
 
Fast3DFiltersVarianceAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.filters
 
Fast3DFiltersVarianceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersVarianceAlgorithm
 
Fast3DFiltersVarianceAlgorithm(Fast3DFiltersAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersVarianceAlgorithm
 
FastCircularHoughSegmentation2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
Segments using a Hough circle transform This code is based on ...
FastCircularHoughSegmentation2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.FastCircularHoughSegmentation2DAlgorithm
 
FastCircularHoughSegmentation2DAlgorithm(FastCircularHoughSegmentation2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.FastCircularHoughSegmentation2DAlgorithm
 
FastKeyValueThresholdStatisticsGenerator - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics
 
FastKeyValueThresholdStatisticsGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator
 
FastKeyValueThresholdStatisticsGenerator(FastKeyValueThresholdStatisticsGenerator) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator
 
fatal(Object, String) - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROToJIPipeLogger
 
fatal(Object, LogMessage) - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROToJIPipeLogger
 
FEATURE_DECIMAL_FORMAT - Static variable in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackMateUtils
 
FFT2DForwardTransform - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.fft
Applies a FFT forward transformation
FFT2DForwardTransform(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.fft.FFT2DForwardTransform
Creates a new instance
FFT2DForwardTransform(FFT2DForwardTransform) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.fft.FFT2DForwardTransform
Creates a copy
FFT2DInverseTransform - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.fft
Applies a FFT forward transformation
FFT2DInverseTransform(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.fft.FFT2DInverseTransform
Creates a new instance
FFT2DInverseTransform(FFT2DInverseTransform) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.fft.FFT2DInverseTransform
Creates a copy
FFT2DSwapQuadrants - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.fft
Applies a FFT forward transformation
FFT2DSwapQuadrants(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.fft.FFT2DSwapQuadrants
Creates a new instance
FFT2DSwapQuadrants(FFT2DSwapQuadrants) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.fft.FFT2DSwapQuadrants
Creates a copy
FFTImageData - Interface in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft
Annotates an image as FFT image
FFTInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo
 
FFTInfo(FHT) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo
 
FilamentComponentVariablesInfo - Class in org.hkijena.jipipe.extensions.ijfilaments.util
 
FilamentComponentVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentComponentVariablesInfo
 
FilamentEdge - Class in org.hkijena.jipipe.extensions.ijfilaments.util
 
FilamentEdge() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentEdge
 
FilamentEdge(FilamentEdge) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentEdge
 
FilamentEdgeVariablesInfo - Class in org.hkijena.jipipe.extensions.ijfilaments.util
 
FilamentEdgeVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentEdgeVariablesInfo
 
FilamentListCellRenderer - Class in org.hkijena.jipipe.extensions.ijfilaments.display
 
FilamentListCellRenderer() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentListCellRenderer
 
Filaments3DData - Class in org.hkijena.jipipe.extensions.ijfilaments.datatypes
 
Filaments3DData() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
Filaments3DData(Filaments3DData) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
FilamentsDataDeserializer - Class in org.hkijena.jipipe.extensions.ijfilaments.util
 
FilamentsDataDeserializer() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDataDeserializer
 
FilamentsDataSerializer - Class in org.hkijena.jipipe.extensions.ijfilaments.util
 
FilamentsDataSerializer() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDataSerializer
 
FilamentsDrawer - Class in org.hkijena.jipipe.extensions.ijfilaments.util
 
FilamentsDrawer() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
FilamentsDrawer(FilamentsDrawer) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
FilamentsManagerPlugin2D - Class in org.hkijena.jipipe.extensions.ijfilaments.display
 
FilamentsManagerPlugin2D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D
 
FilamentsManagerPlugin2D.SelectionContextPanel - Class in org.hkijena.jipipe.extensions.ijfilaments.display
 
FilamentsManagerPlugin2D.SelectionInfoContextPanel - Class in org.hkijena.jipipe.extensions.ijfilaments.display
 
FilamentsManagerPlugin3D - Class in org.hkijena.jipipe.extensions.ijfilaments.display
 
FilamentsManagerPlugin3D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
FilamentsManagerPlugin3D.SelectionContextPanel - Class in org.hkijena.jipipe.extensions.ijfilaments.display
 
FilamentsManagerPlugin3D.SelectionInfoContextPanel - Class in org.hkijena.jipipe.extensions.ijfilaments.display
 
FilamentsNodeTypeCategory - Class in org.hkijena.jipipe.extensions.ijfilaments
 
FilamentsNodeTypeCategory() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.FilamentsNodeTypeCategory
 
FilamentsPlugin - Class in org.hkijena.jipipe.extensions.ijfilaments
Extension that adds filaments supports
FilamentsPlugin() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.FilamentsPlugin
 
FilamentsToRoi3dDataTypeConverter - Class in org.hkijena.jipipe.extensions.ijfilaments.datatypes
 
FilamentsToRoi3dDataTypeConverter() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.datatypes.FilamentsToRoi3dDataTypeConverter
 
FilamentsToRoiDataTypeConverter - Class in org.hkijena.jipipe.extensions.ijfilaments.datatypes
 
FilamentsToRoiDataTypeConverter() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.datatypes.FilamentsToRoiDataTypeConverter
 
FilamentUnconnectedEdgeVariablesInfo - Class in org.hkijena.jipipe.extensions.ijfilaments.util
 
FilamentUnconnectedEdgeVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentUnconnectedEdgeVariablesInfo
 
FilamentVertex - Class in org.hkijena.jipipe.extensions.ijfilaments.util
 
FilamentVertex() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
FilamentVertex(FilamentVertex) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
FilamentVertexVariablesInfo - Class in org.hkijena.jipipe.extensions.ijfilaments.util
 
FilamentVertexVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertexVariablesInfo
 
FileChooserBookmark - Class in org.hkijena.jipipe.extensions.parameters.library.filesystem
 
FileChooserBookmark() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.filesystem.FileChooserBookmark
 
FileChooserBookmark(String, Path) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.filesystem.FileChooserBookmark
 
FileChooserBookmark(FileChooserBookmark) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.filesystem.FileChooserBookmark
 
FileChooserBookmarkList - Class in org.hkijena.jipipe.extensions.parameters.library.filesystem
 
FileChooserBookmarkList() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.filesystem.FileChooserBookmarkList
 
FileChooserBookmarkList(FileChooserBookmarkList) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.filesystem.FileChooserBookmarkList
 
FileChooserComponent() - Constructor for class org.hkijena.jipipe.ui.components.AdvancedFileChooser.FileChooserComponent
 
FileChooserComponentUI(JFileChooser) - Constructor for class org.hkijena.jipipe.ui.components.AdvancedFileChooser.FileChooserComponentUI
 
FileChooserSettings - Class in org.hkijena.jipipe.extensions.settings
Settings concerning file dialogs
FileChooserSettings() - Constructor for class org.hkijena.jipipe.extensions.settings.FileChooserSettings
 
FileChooserSettings.FileChooserType - Enum in org.hkijena.jipipe.extensions.settings
 
FileChooserSettings.LastDirectoryKey - Enum in org.hkijena.jipipe.extensions.settings
 
FileData - Class in org.hkijena.jipipe.extensions.filesystem.dataypes
Data containing a file
FileData(Path) - Constructor for class org.hkijena.jipipe.extensions.filesystem.dataypes.FileData
 
FileData(String) - Constructor for class org.hkijena.jipipe.extensions.filesystem.dataypes.FileData
 
FileDataSource - Class in org.hkijena.jipipe.extensions.filesystem.datasources
Provides an input file
FileDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.FileDataSource
Initializes the algorithm
FileDataSource(FileDataSource) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.FileDataSource
Copies the algorithm
FileImageJDataExporterUI - Class in org.hkijena.jipipe.api.compat.ui
 
FileImageJDataExporterUI(JIPipeWorkbench, ImageJDataExportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ui.FileImageJDataExporterUI
 
FileImageJDataImporterUI - Class in org.hkijena.jipipe.api.compat.ui
 
FileImageJDataImporterUI(JIPipeWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ui.FileImageJDataImporterUI
 
FileListDataSource - Class in org.hkijena.jipipe.extensions.filesystem.datasources
Provides an input file
FileListDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.FileListDataSource
Initializes the algorithm
FileListDataSource(FileListDataSource) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.FileListDataSource
Copies the algorithm
FileParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.filesystem
Editor for a File parameter
FileParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.filesystem.FileParameterEditorUI
 
FilePathParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.filesystem
Editor for a Path parameter
FilePathParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.filesystem.FilePathParameterEditorUI
 
FilesystemDataSlotPreview - Class in org.hkijena.jipipe.extensions.filesystem.resultanalysis
Renders filesystem data as table cell
FilesystemDataSlotPreview(JIPipeProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableMetadataRow, JIPipeExportedDataAnnotation) - Constructor for class org.hkijena.jipipe.extensions.filesystem.resultanalysis.FilesystemDataSlotPreview
Creates a new renderer
FilesystemExtensionSettings - Class in org.hkijena.jipipe.extensions.filesystem
Settings for Filesystem.
FilesystemExtensionSettings() - Constructor for class org.hkijena.jipipe.extensions.filesystem.FilesystemExtensionSettings
 
FileSystemNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories
 
FileSystemNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
FilesystemPlugin - Class in org.hkijena.jipipe.extensions.filesystem
Extension that provides filesystem data types
FilesystemPlugin() - Constructor for class org.hkijena.jipipe.extensions.filesystem.FilesystemPlugin
 
FileTableModel - Class in org.hkijena.jipipe.ui.ijupdater
Copy of FileTableModel for usage in JIPipe
FileTableModel(FilesCollection) - Constructor for class org.hkijena.jipipe.ui.ijupdater.FileTableModel
 
FileTableModelFilter - Class in org.hkijena.jipipe.ui.ijupdater
 
FileTableModelFilter(SearchTextField, ViewOptions.Option) - Constructor for class org.hkijena.jipipe.ui.ijupdater.FileTableModelFilter
 
fileToRow - Variable in class org.hkijena.jipipe.ui.ijupdater.FileTableModel
 
FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory
 
FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory
 
FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory
 
FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory
 
FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory
 
FILL_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory
 
FILL_COLOR - Static variable in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsNodeTypeCategory
 
FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory
 
FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory
 
FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory
 
FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory
 
FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory
 
FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory
 
FILL_COLOR_DARK - Static variable in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsNodeTypeCategory
 
fillPaintIndex - Variable in class org.hkijena.jipipe.extensions.plots.utils.ColorMapSupplier
 
filter(BiPredicate<JIPipeDataTable, Integer>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Creates a new instance that contains the filtered items.
filter(Filaments3DData, Set<FilamentEdge>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.ijfilaments.parameters.EdgeMaskParameter
 
filter(Filaments3DData, Set<FilamentVertex>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.ijfilaments.parameters.VertexMaskParameter
 
FilterAndMergeRoiByStatisticsScriptAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge
Wrapper around RoiManager
FilterAndMergeRoiByStatisticsScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge.FilterAndMergeRoiByStatisticsScriptAlgorithm
Instantiates a new node type.
FilterAndMergeRoiByStatisticsScriptAlgorithm(FilterAndMergeRoiByStatisticsScriptAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge.FilterAndMergeRoiByStatisticsScriptAlgorithm
Instantiates a new node type.
filterArray(float[], boolean[], boolean) - Static method in class org.hkijena.jipipe.extensions.scene3d.utils.Scene3DUtils
 
FilterByAnnotation - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Algorithm that splits the input data by a specified annotation
FilterByAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.FilterByAnnotation
 
FilterByAnnotation(FilterByAnnotation) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.FilterByAnnotation
Copies the algorithm
FilterByAnnotationIfElse - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Algorithm that splits the input data by a specified annotation
FilterByAnnotationIfElse(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.FilterByAnnotationIfElse
 
FilterByAnnotationIfElse(FilterByAnnotationIfElse) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.FilterByAnnotationIfElse
Copies the algorithm
filteredForFrameAndChannel(int, int) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
FilterFilamentEdgesByProperties - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.filter
 
FilterFilamentEdgesByProperties(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.FilterFilamentEdgesByProperties
 
FilterFilamentEdgesByProperties(FilterFilamentEdgesByProperties) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.FilterFilamentEdgesByProperties
 
FilterFilamentsByProperties - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.filter
 
FilterFilamentsByProperties(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.FilterFilamentsByProperties
 
FilterFilamentsByProperties(FilterFilamentsByProperties) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.FilterFilamentsByProperties
 
FilterFilamentVerticesByProperties - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.filter
 
FilterFilamentVerticesByProperties(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.FilterFilamentVerticesByProperties
 
FilterFilamentVerticesByProperties(FilterFilamentVerticesByProperties) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.FilterFilamentVerticesByProperties
 
FilteringParameters() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.FilteringParameters
 
FilteringParameters(IterativeThresholdByROIStatistics2DAlgorithm.FilteringParameters) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.FilteringParameters
 
FilterLabelsByExpression2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter
 
FilterLabelsByExpression2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression2DAlgorithm
 
FilterLabelsByExpression2DAlgorithm(FilterLabelsByExpression2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression2DAlgorithm
 
FilterLabelsByExpression2DAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter
 
FilterLabelsByExpression3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter
 
FilterLabelsByExpression3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression3DAlgorithm
 
FilterLabelsByExpression3DAlgorithm(FilterLabelsByExpression3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression3DAlgorithm
 
FilterLabelsByExpression3DAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter
 
FilterLabelsByIdAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter
 
FilterLabelsByIdAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByIdAlgorithm
 
FilterLabelsByIdAlgorithm(FilterLabelsByIdAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByIdAlgorithm
 
FilterLabelsByMaskAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter
 
FilterLabelsByMaskAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByMaskAlgorithm
 
FilterLabelsByMaskAlgorithm(FilterLabelsByMaskAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByMaskAlgorithm
 
FilterLabelsByOverlapAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter
 
FilterLabelsByOverlapAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm
 
FilterLabelsByOverlapAlgorithm(FilterLabelsByOverlapAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm
 
FilterLabelsByOverlapAlgorithm.LabelFilterSettings - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter
 
FilterLabelsByStatisticsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter
Wrapper around RoiManager
FilterLabelsByStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm
Instantiates a new node type.
FilterLabelsByStatisticsAlgorithm(FilterLabelsByStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm
Instantiates a new node type.
FilterLabelsByThicknessAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter
 
FilterLabelsByThicknessAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByThicknessAlgorithm
 
FilterLabelsByThicknessAlgorithm(FilterLabelsByThicknessAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByThicknessAlgorithm
 
FilterPaths - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Filters input files
FilterPaths(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.FilterPaths
Instantiates the algorithm
FilterPaths(FilterPaths) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.FilterPaths
Copies the algorithm
FilterRoi3DByOverlapAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter
 
FilterRoi3DByOverlapAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm
 
FilterRoi3DByOverlapAlgorithm(FilterRoi3DByOverlapAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm
 
FilterRoi3DByOverlapAlgorithm.ROIFilterSettings - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter
 
FilterRoi3DByStatisticsAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter
Wrapper around RoiManager
FilterRoi3DByStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm
Instantiates a new node type.
FilterRoi3DByStatisticsAlgorithm(FilterRoi3DByStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm
Instantiates a new node type.
FilterRoi3DListsAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter
 
FilterRoi3DListsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm
 
FilterRoi3DListsAlgorithm(FilterRoi3DListsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm
 
FilterRoi3DListsAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter
 
FilterRoiByNameAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter
Wrapper around RoiManager
FilterRoiByNameAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm
Instantiates a new node type.
FilterRoiByNameAlgorithm(FilterRoiByNameAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm
Instantiates a new node type.
FilterRoiByNameAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter
 
FilterROIByOverlapAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter
 
FilterROIByOverlapAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm
 
FilterROIByOverlapAlgorithm(FilterROIByOverlapAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm
 
FilterROIByOverlapAlgorithm.ROIFilterSettings - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter
 
FilterRoiByStatisticsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter
Wrapper around RoiManager
FilterRoiByStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm
Instantiates a new node type.
FilterRoiByStatisticsAlgorithm(FilterRoiByStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm
Instantiates a new node type.
FilterRoiByStatisticsScriptAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter
Wrapper around RoiManager
FilterRoiByStatisticsScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsScriptAlgorithm
Instantiates a new node type.
FilterRoiByStatisticsScriptAlgorithm(FilterRoiByStatisticsScriptAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsScriptAlgorithm
Instantiates a new node type.
FilterROIListsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter
 
FilterROIListsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm
 
FilterROIListsAlgorithm(FilterROIListsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm
 
FilterROIListsAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter
 
FilterTableRowsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.filter
Algorithm that integrates columns
FilterTableRowsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.filter.FilterTableRowsAlgorithm
Creates a new instance
FilterTableRowsAlgorithm(FilterTableRowsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.filter.FilterTableRowsAlgorithm
Creates a copy
FilterTablesAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.filter
Algorithm that integrates columns
FilterTablesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.filter.FilterTablesAlgorithm
Creates a new instance
FilterTablesAlgorithm(FilterTablesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.filter.FilterTablesAlgorithm
Creates a copy
FilterTablesAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.tables.nodes.filter
 
filterTracks(Set<Integer>) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
Returns a copy of this track collection that has only the selected track IDs Please note that all spots are still present
filterVisibleROI(ROIListData, ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
Uses the current settings to filter ROI based on visibility within the current image index
findAnyOf(Path...) - Static method in class org.hkijena.jipipe.utils.PathUtils
Returns the first path that exists
findAvailableDatasets(String) - Method in interface org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetEntryProvider
 
findAvailableDatasets(String) - Method in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.HDF5DatasetEntryProvider
 
findCompartment(String) - Method in class org.hkijena.jipipe.api.JIPipeProject
Finds a compartment by UUID or alias
findComponentIds() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
findDataTypes(Predicate<Class<?>>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Returns all JIPipeData classes that satisfy the provided predicate
findDataTypesByInterfaces(Class<?>...) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Returns all JIPipeData classes that satisfy the provided interfaces
findExtensionById(String) - Method in class org.hkijena.jipipe.JIPipe
 
findExtensionById(String) - Method in interface org.hkijena.jipipe.JIPipeService
 
findFileByExtension(String...) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage
Finds the first matching file by extension.
findFileByExtensionIn(Path, String...) - Static method in class org.hkijena.jipipe.utils.PathUtils
Finds a file in the specified folder with given extension
findFileByExtensionRecursivelyIn(Path, String...) - Static method in class org.hkijena.jipipe.utils.PathUtils
Finds a file in the specified folder with given extension
findFilesByExtension(String...) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage
Lists all file elements that have given extension.
findFilesByExtensionIn(Path, String...) - Static method in class org.hkijena.jipipe.utils.PathUtils
Finds a file in the specified folder with given extension
findFirstNodeOfType(Class<T>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
findHeight(Collection<BufferedImage>) - Static method in class org.hkijena.jipipe.extensions.imp.utils.ImpImageUtils
 
FindHoles2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
 
FindHoles2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.FindHoles2DAlgorithm
 
FindHoles2DAlgorithm(FindHoles2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.FindHoles2DAlgorithm
 
FindMaxima3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.features
 
FindMaxima3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.features.FindMaxima3DAlgorithm
 
FindMaxima3DAlgorithm(FindMaxima3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.features.FindMaxima3DAlgorithm
 
findModuleIO(ModuleItem<?>, JIPipeSlotType) - Method in class org.hkijena.jipipe.extensions.imagej2.io.DefaultImageJ2JIPipeModuleIOService
 
findModuleIO(ModuleItem<?>, JIPipeSlotType) - Method in interface org.hkijena.jipipe.extensions.imagej2.io.ImageJ2JIPipeModuleIOService
Finds the best matching IO handler for the module item
findNChannels(Map<ImageSliceIndex, BufferedImage>) - Static method in class org.hkijena.jipipe.extensions.imp.utils.ImpImageUtils
 
findNewExtensions() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
Updates the list of new extensions
findNFrames(Map<ImageSliceIndex, BufferedImage>) - Static method in class org.hkijena.jipipe.extensions.imp.utils.ImpImageUtils
 
findNode(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Finds a node by its UUID (as string) or alias ID.
findNode(JIPipeParameterTree, JIPipeParameterAccess) - Static method in interface org.hkijena.jipipe.extensions.expressions.ExpressionParameterVariablesInfo
Helper method that attempts to find the underlying graph node of a parameter access
findNodeGraphUIs(JIPipeWorkbench, NodeGroup) - Static method in class org.hkijena.jipipe.ui.grouping.JIPipeNodeGroupUI
Finds open tabs
findNodeUUID(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Finds a node UUID by its UUID (as string) or alias ID.
findNSlices(Map<ImageSliceIndex, BufferedImage>) - Static method in class org.hkijena.jipipe.extensions.imp.utils.ImpImageUtils
 
findOpenPipelineEditorTabs(JIPipeProjectCompartment) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
findOpenPipelineEditorTabs(UUID) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
FindParticles2D - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze
Converts a mask to ROI and ROI measurements
FindParticles2D(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
FindParticles2D(FindParticles2D) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
Copies the algorithm
FindParticles3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate
 
FindParticles3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
FindParticles3DAlgorithm(FindParticles3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
findPredecessorNodeCache(JIPipeParameterTree, JIPipeParameterAccess) - Static method in interface org.hkijena.jipipe.extensions.expressions.ExpressionParameterVariablesInfo
Helper method that attempts to find the underlying graph node of a parameter access and returns its cache if available
findRangeBounds(CategoryDataset) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Returns the range of values from the specified dataset that the renderer will require to display all the data.
findTabNameFor(Component) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Finds the tab title for the content
findUnindexedNaNNormalVertices(float[], float[]) - Static method in class org.hkijena.jipipe.extensions.scene3d.utils.Scene3DUtils
 
findUnsatisfiedDependencies(Set<JIPipeDependency>) - Static method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
Finds all dependencies that cannot be met
findWidth(Collection<BufferedImage>) - Static method in class org.hkijena.jipipe.extensions.imp.utils.ImpImageUtils
 
findWorkerOf(JIPipeRunnable) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
Finds the worker associated to the JIPipeRunnable
FinishedEvent(JIPipeRunWorker) - Constructor for class org.hkijena.jipipe.api.JIPipeRunnable.FinishedEvent
 
FinishedEventEmitter() - Constructor for class org.hkijena.jipipe.api.JIPipeRunnable.FinishedEventEmitter
 
fireChangedEvent(TableModelEvent) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Fires a TableModelEvent to all listeners
fireChangedEvent(TableModelEvent) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Fires a TableModelEvent to all listeners
fireFileChanged(FileObject) - Method in class org.hkijena.jipipe.ui.ijupdater.FileTableModel
 
fireFileChanged(FileObject) - Method in class org.hkijena.jipipe.ui.ijupdater.ManagerUI
 
fireRowChanged(int) - Method in class org.hkijena.jipipe.ui.ijupdater.FileTableModel
 
FirstIndexOfFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
FirstIndexOfFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.FirstIndexOfFunction
 
fitImageToScreen() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
fitImageToScreen() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
fitImageToScreenOnce() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerCacheDataViewerWindow
Triggers the fitImage() command if applied once
fitRowHeights(JTable) - Static method in class org.hkijena.jipipe.utils.UIUtils
Fits the row heights of a JTable
fitSize(int, int, int, int, double) - Method in enum org.hkijena.jipipe.utils.SizeFitMode
 
fixBlankCanvasLater() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomImage3DUniverse
 
fixCompartmentOutputs() - Method in class org.hkijena.jipipe.api.JIPipeProject
Repairs restored compartment outputs
FixedMargin - Class in org.hkijena.jipipe.extensions.parameters.library.roi
Related to Margin, but with fixed-size objects
FixedMargin() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
Creates a new instance
FixedMargin(Rectangle) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
Creates a margin from a rectangle
FixedMargin(FixedMargin) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
Creates a copy
FixedMargin(Anchor) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
 
FixedMargin.List - Class in org.hkijena.jipipe.extensions.parameters.library.roi
List parameter of FixedMargin
FixedMarginEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.roi
Editor for FixedMargin
FixedMarginEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMarginEditorUI
 
FixedRatio(double) - Constructor for class org.hkijena.jipipe.utils.AutoResizeSplitPane.FixedRatio
 
FixedRatio() - Constructor for class org.hkijena.jipipe.utils.AutoResizeSplitPane.FixedRatio
 
FixOverlapsNonBranchingAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.process
 
FixOverlapsNonBranchingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
FixOverlapsNonBranchingAlgorithm(FixOverlapsNonBranchingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
FixOverlapsNonBranchingAlgorithm.EdgeCandidate - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.process
 
fixWeirdRendering() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomImage3DUniverse
Fixes a weird rendering bug where the objects are displayed as stripes Zoom in+out
FLAGS_NONE - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
FLAGS_SPLIT_PANE_RATIO_1_1 - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
FLAGS_SPLIT_PANE_SWITCH_CONTENT - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
FLAGS_SPLIT_PANE_VERTICAL - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
flatten() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Makes all ROI visible on all stacks
FlexContentPanel - Class in org.hkijena.jipipe.ui.components
A panel that holds a toolbar, ribbon, and sidebar.
FlexContentPanel() - Constructor for class org.hkijena.jipipe.ui.components.FlexContentPanel
 
FlexContentPanel(int) - Constructor for class org.hkijena.jipipe.ui.components.FlexContentPanel
 
FlexContentWorkbenchPanel - Class in org.hkijena.jipipe.ui.components
A content panel with access to a JIPipeWorkbench
FlexContentWorkbenchPanel(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.ui.components.FlexContentWorkbenchPanel
 
FlexContentWorkbenchPanel(JIPipeWorkbench, int) - Constructor for class org.hkijena.jipipe.ui.components.FlexContentWorkbenchPanel
 
FloatArrayParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays
 
FloatArrayParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.FloatArrayParameterImageJ2ModuleInput
 
FloatArrayTableColumn - Class in org.hkijena.jipipe.extensions.tables.datatypes
TableColumn that contains doubles.
FloatArrayTableColumn(float[], String) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.FloatArrayTableColumn
Creates a new instance
FloatConstantValueImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant
 
FloatConstantValueImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.FloatConstantValueImageJ2OutOfBoundsFactoryData
 
FloatConstantValueImageJ2OutOfBoundsFactoryData(OutOfBoundsConstantValueFactory<?, ?>) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.FloatConstantValueImageJ2OutOfBoundsFactoryData
 
FloatConstantValueImageJ2OutOfBoundsFactoryData(FloatConstantValueImageJ2OutOfBoundsFactoryData) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.FloatConstantValueImageJ2OutOfBoundsFactoryData
 
FloatList - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.list
A list of Float
FloatList() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.list.FloatList
Creates a new empty list
FloatList(FloatList) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.list.FloatList
Creates a copy
FloatNumberRangeParameter - Class in org.hkijena.jipipe.extensions.parameters.library.ranges
 
FloatNumberRangeParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.ranges.FloatNumberRangeParameter
 
FloatNumberRangeParameter(FloatNumberRangeParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.ranges.FloatNumberRangeParameter
 
FloatNumberRangeParameter(float, float) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.ranges.FloatNumberRangeParameter
 
FloatParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives
 
FloatParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.FloatParameterImageJ2ModuleInput
 
FloatParameterImageJ2ModuleOutput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives
 
FloatParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.FloatParameterImageJ2ModuleOutput
 
FloatParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Info for Float
FloatParameterTypeInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.FloatParameterTypeInfo
 
FloatPrimitiveParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Info for Float
FloatPrimitiveParameterTypeInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.FloatPrimitiveParameterTypeInfo
 
FloodFillMaskDrawer2DTool - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer
The standard mouse selection.
FloodFillMaskDrawer2DTool(MaskDrawerPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.FloodFillMaskDrawer2DTool
 
FloorColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a floor function
FloorColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.FloorColumnOperation
 
flush() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfoOutputStream
 
FolderData - Class in org.hkijena.jipipe.extensions.filesystem.dataypes
Data that stores a folder
FolderData(Path) - Constructor for class org.hkijena.jipipe.extensions.filesystem.dataypes.FolderData
 
FolderData(String) - Constructor for class org.hkijena.jipipe.extensions.filesystem.dataypes.FolderData
 
FolderDataSource - Class in org.hkijena.jipipe.extensions.filesystem.datasources
Provides an input folder
FolderDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.FolderDataSource
Initializes the algorithm
FolderDataSource(FolderDataSource) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.FolderDataSource
Copies the algorithm
FolderImageJDataExporterUI - Class in org.hkijena.jipipe.api.compat.ui
 
FolderImageJDataExporterUI(JIPipeWorkbench, ImageJDataExportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ui.FolderImageJDataExporterUI
 
FolderImageJDataImporterUI - Class in org.hkijena.jipipe.api.compat.ui
 
FolderImageJDataImporterUI(JIPipeWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ui.FolderImageJDataImporterUI
 
FolderListDataSource - Class in org.hkijena.jipipe.extensions.filesystem.datasources
Provides an input folder
FolderListDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.FolderListDataSource
Creates a new instance
FolderListDataSource(FolderListDataSource) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.FolderListDataSource
Copies the algorithm
FollowSpotsPerTrackNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks
 
FollowSpotsPerTrackNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode
 
FollowSpotsPerTrackNode(FollowSpotsPerTrackNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode
 
FontFamilyParameter - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
 
FontFamilyParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.FontFamilyParameter
 
FontFamilyParameter(DynamicStringEnumParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.FontFamilyParameter
 
FontFamilyParameter(String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.FontFamilyParameter
 
FontFamilyParameter.Deserializer - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Deserializes FontFamilyParameter
FontFamilyParameter.Serializer - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
FontStyleParameter - Enum in org.hkijena.jipipe.extensions.parameters.library.primitives
 
FORCE_REFLECTION - Static variable in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Whether to force reflection
FORCE_TRAVERSE - Static variable in class org.hkijena.jipipe.ui.parameters.ParameterPanel
With this flag, the parameter collection is always traversed, even if the provided parameter collection was already traversed
forceCloseTab(DocumentTabPane.DocumentTab) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Closes the tab.
forEach3DIn5DGenerate(ImagePlus, TriFunction<ImageHandler, ImageSliceIndex, JIPipeProgressInfo, ImageHandler>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.ij3d.IJ3DUtils
 
forEach3DIn5DIO(ImagePlus, TriConsumer<ImageHandler, ImageSliceIndex, JIPipeProgressInfo>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.ij3d.IJ3DUtils
 
ForEachFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
ForEachFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.ForEachFunction
 
forEachIndexedCTStack(ImagePlus, TriConsumer<ImagePlus, ImageSliceIndex, JIPipeProgressInfo>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Runs the function for each Z, C, and T slice.
forEachIndexedSlice(ImagePlus, BiConsumer<ImageProcessor, Integer>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Runs the function for each slice
forEachIndexedZCTSlice(ImagePlus, BiConsumer<ImageProcessor, ImageSliceIndex>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Runs the function for each Z, C, and T slice.
forEachIndexedZCTSlice(ImpImageData, BiConsumer<BufferedImage, ImageSliceIndex>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imp.utils.ImpImageUtils
Runs the function for each Z, C, and T slice.
forEachIndexedZCTSliceWithProgress(ImagePlus, TriConsumer<ImageProcessor, ImageSliceIndex, JIPipeProgressInfo>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Runs the function for each Z, C, and T slice.
forEachIndexedZTSlice(ImagePlus, BiConsumer<Map<Integer, ImageProcessor>, ImageSliceIndex>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Deprecated.
forEachSlice(ImagePlus, Consumer<ImageProcessor>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Runs the function for each slice
formatBasePath(String) - Static method in class org.hkijena.jipipe.utils.JIPipeResourceManager
Applies the appropriate formatting for a base path
formatDateTime(LocalDateTime) - Static method in class org.hkijena.jipipe.utils.StringUtils
A nice human-readable format
formatDuration(long) - Static method in class org.hkijena.jipipe.utils.StringUtils
Formats a duration in milliseconds to something readable
formatNumber(double) - Static method in class org.hkijena.jipipe.extensions.parameters.library.primitives.NumberParameterEditorUI
 
formatPluralS(int, String) - Static method in class org.hkijena.jipipe.utils.StringUtils
 
FormData - Class in org.hkijena.jipipe.extensions.forms.datatypes
Base class for any form data.
FormData() - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.FormData
 
FormData(FormData) - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.FormData
 
FormData.Serializer - Class in org.hkijena.jipipe.extensions.forms.datatypes
 
FormData.TabSettings - Class in org.hkijena.jipipe.extensions.forms.datatypes
 
FormGeneratorAlgorithm - Class in org.hkijena.jipipe.extensions.forms.algorithms
A node base class that adds a new form element into the list of existing forms
FormGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.FormGeneratorAlgorithm
 
FormGeneratorAlgorithm(FormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.FormGeneratorAlgorithm
 
FormPanel - Class in org.hkijena.jipipe.ui.components
Organizes UI in a form layout with integrated help functionality, and grouping with conditional visibility
FormPanel(int) - Constructor for class org.hkijena.jipipe.ui.components.FormPanel
 
FormPanel(MarkdownDocument, int) - Constructor for class org.hkijena.jipipe.ui.components.FormPanel
Creates a new instance
FormPanel.FormPanelContentPanel - Class in org.hkijena.jipipe.ui.components
 
FormPanel.FormPanelEntry - Class in org.hkijena.jipipe.ui.components
 
FormPanel.GroupHeaderPanel - Class in org.hkijena.jipipe.ui.components
Panel that contains a group header
FormPanel.HoverHelpEvent - Class in org.hkijena.jipipe.ui.components
Event triggered when the user triggers a hover-help
FormPanel.HoverHelpEventEmitter - Class in org.hkijena.jipipe.ui.components
 
FormPanel.HoverHelpEventListener - Interface in org.hkijena.jipipe.ui.components
 
FormPanelContentPanel() - Constructor for class org.hkijena.jipipe.ui.components.FormPanel.FormPanelContentPanel
 
FormPanelEntry(int, Component, Component, Component, boolean) - Constructor for class org.hkijena.jipipe.ui.components.FormPanel.FormPanelEntry
 
FormsDialog - Class in org.hkijena.jipipe.extensions.forms.ui
 
FormsDialog(JIPipeWorkbench, List<JIPipeMultiIterationStep>, JIPipeDataSlot, String) - Constructor for class org.hkijena.jipipe.extensions.forms.ui.FormsDialog
 
FormsPlugin - Class in org.hkijena.jipipe.extensions.forms
Extension that adds forms
FormsPlugin() - Constructor for class org.hkijena.jipipe.extensions.forms.FormsPlugin
 
forUpload - Variable in class org.hkijena.jipipe.ui.ijupdater.ResolveDependencies
 
FrangiVesselnessFeatures - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features
Applies CLAHE image enhancing
FrangiVesselnessFeatures(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.FrangiVesselnessFeatures
 
FrangiVesselnessFeatures(FrangiVesselnessFeatures) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.FrangiVesselnessFeatures
Copies the algorithm
FrangiVesselnessFeatures.SlicingMode - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features
Available ways how to handle higher-dimensional images
fromCSV(Path) - Static method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
fromCSV(Path, String) - Static method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
fromEvaluator(ExpressionEvaluator, boolean) - Static method in class org.hkijena.jipipe.extensions.expressions.ExpressionConstantEntry
Extracts operators from an evaluator
fromEvaluator(ExpressionEvaluator, boolean) - Static method in class org.hkijena.jipipe.extensions.expressions.ExpressionOperatorEntry
Extracts operators from an evaluator
fromFile(Path) - Static method in class org.hkijena.jipipe.ui.components.markdown.MarkdownDocument
Loads a document from file
fromImage(ImagePlus, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.LUTData
Creates a LUT object from an image.
fromIndex(int) - Static method in enum org.hkijena.jipipe.ui.grapheditor.NodeHotKeyStorage.Hotkey
 
fromJson(JsonNode) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
fromJson(JsonNode) - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration
Loads this configuration from JSON
fromJson(JsonNode, JIPipeValidationReportContext, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.JIPipeProject
Loads the project from JSON
fromJson(JsonNode, JIPipeValidationReportContext, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Loads this graph from JSON
fromJson(JsonNode, JIPipeValidationReportContext, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Loads this algorithm from JSON Please do not override this method if absolutely necessary.
fromJson(JsonNode) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Loads the holder from JSON
fromJson(JsonNode) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.FormData
Loads metadata from JSON
fromJson(JsonNode) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
Loads metadata from JSON
fromJson(JsonNode) - Method in interface org.hkijena.jipipe.utils.json.JsonDeserializable
Loads JSON data into the current object instance
fromKeyCode(int) - Static method in enum org.hkijena.jipipe.ui.grapheditor.NodeHotKeyStorage.Hotkey
 
fromList(Collection<?>, String) - Static method in interface org.hkijena.jipipe.extensions.tables.datatypes.TableColumn
Creates a new column from a collection.
fromLUT(LUT, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.LUTData
Imports an ImageJ LUT into a LUT object.
fromPluginResource(String) - Static method in class org.hkijena.jipipe.ui.components.markdown.MarkdownDocument
Loads a document from the JIPipe plugin resources
fromPluginResource(String, Map<String, Class<?>>) - Static method in class org.hkijena.jipipe.ui.components.markdown.MarkdownDocument
Loads a document from the JIPipe plugin resources
fromPython(PyDictionary) - Static method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Converts a Python dictionary of column name to row data list to a results table
fromResourceURL(URL, boolean, Map<String, Class<?>>) - Static method in class org.hkijena.jipipe.ui.components.markdown.MarkdownDocument
Loads a document from a resource URL
fromTableModel(TableModel, TableColumnModel, boolean) - Static method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Imports a table from a table model and column model
fromXLSX(Path) - Static method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
fullRedraw() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Removes all UIs and adds them back in
functionallyEquals(Object) - Method in class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents
 
functionallyEquals(Object) - Method in interface org.hkijena.jipipe.api.JIPipeFunctionallyComparable
 
functionallyEquals(Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
 
functionallyEquals(Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
functionallyEquals(Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns true if this node and the other node are functionally equal (i.e. they have the same functional parameters).
FunctionParameter<I,P,O> - Class in org.hkijena.jipipe.extensions.parameters.api.functions
A parameter that allows to model a function with an input, an output, and parameters.
FunctionParameter(Class<I>, Class<P>, Class<O>) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter
Creates a new instance
FunctionParameter(FunctionParameter<I, P, O>) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter
 
FunctionParameter.Deserializer<I,P,O> - Class in org.hkijena.jipipe.extensions.parameters.api.functions
Deserializes the parameter
FunctionParameter.Serializer - Class in org.hkijena.jipipe.extensions.parameters.api.functions
Serializes the parameter
FunctionParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.api.functions
FunctionParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterEditorUI
Creates new instance
FunctionParameterInputAccess<I,P,O> - Class in org.hkijena.jipipe.extensions.parameters.api.functions
Access to a FunctionParameter input
FunctionParameterInputAccess(JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterInputAccess
 
FunctionParameterOutputAccess<I,P,O> - Class in org.hkijena.jipipe.extensions.parameters.api.functions
Access to a FunctionParameter output
FunctionParameterOutputAccess(JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterOutputAccess
 
FunctionParameterParameterAccess<I,P,O> - Class in org.hkijena.jipipe.extensions.parameters.api.functions
Access to a FunctionParameter parameter
FunctionParameterParameterAccess(JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterParameterAccess
 
FunctionSelectorList - Class in org.hkijena.jipipe.extensions.expressions
Panel that allows the user to select an ExpressionFunction
FunctionSelectorList() - Constructor for class org.hkijena.jipipe.extensions.expressions.FunctionSelectorList
 
FunctionSelectorList.ExpressionFunctionRenderer - Class in org.hkijena.jipipe.extensions.expressions
 

G

GaussianBlur2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur
Wrapper around GaussianBlur
GaussianBlur2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.GaussianBlur2DAlgorithm
Instantiates a new node type.
GaussianBlur2DAlgorithm(GaussianBlur2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.GaussianBlur2DAlgorithm
Instantiates a new node type.
GaussianBlur3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur
Wrapper around GaussianBlur
GaussianBlur3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm
Instantiates a new node type.
GaussianBlur3DAlgorithm(GaussianBlur3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm
Instantiates a new node type.
GaussianFitSpotSegmentation3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.segmentation
 
GaussianFitSpotSegmentation3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.GaussianFitSpotSegmentation3DAlgorithm
 
GaussianFitSpotSegmentation3DAlgorithm(GaussianFitSpotSegmentation3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.GaussianFitSpotSegmentation3DAlgorithm
 
gc() - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter
 
gc(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph
 
GCEvent(JIPipeGraphRunGCGraph, JIPipeOutputDataSlot) - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph.GCEvent
 
GCEventEmitter() - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph.GCEventEmitter
 
GeneralDataSettings - Class in org.hkijena.jipipe.extensions.settings
 
GeneralDataSettings() - Constructor for class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
GeneralImageViewerPanelPlugin2D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d
 
GeneralImageViewerPanelPlugin2D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.GeneralImageViewerPanelPlugin2D
 
GeneralImageViewerPanelPlugin3D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins3d
 
GeneralImageViewerPanelPlugin3D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins3d.GeneralImageViewerPanelPlugin3D
 
GeneralUISettings - Class in org.hkijena.jipipe.extensions.settings
All settings for JIPipeGraphEditorUI
GeneralUISettings() - Constructor for class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
generate(JIPipeWorkbench, Component, Class<T>) - Method in class org.hkijena.jipipe.api.parameters.DefaultJIPipeParameterGenerator
 
generate(JIPipeWorkbench, Component, Class<T>) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterGenerator
Generates the values
generate(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.StringQueryExpression
Attempts to run the expression.
generate(int, int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.BlackToWhiteTrackBackground
 
generate(int, int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HSBHueTrackBackground
 
generate(int, int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.LABBlueYellowTrackBackground
 
generate(int, int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.LABGreenRedTrackBackground
 
generate(int, int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.LABLightnessTrackBackground
 
generate(int, int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.RGBBlueTrackBackground
 
generate(int, int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.RGBGreenTrackBackground
 
generate(int, int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.RGBRedTrackBackground
 
generate(int, int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.WhiteToRedTrackBackground
 
generate(JIPipeWorkbench, Component, Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterGenerator
 
generate(int, int, int, int) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.DefaultTrackBackground
 
generate(int, int, int, int) - Method in interface org.hkijena.jipipe.extensions.parameters.library.ranges.PaintGenerator
 
generateAfterDialog(JIPipeWorkbench, Component, Class<T>) - Method in class org.hkijena.jipipe.api.parameters.DefaultJIPipeParameterGenerator
This function generates the values after the dialog was confirmed
generateAfterDialog(JIPipeWorkbench, Component, Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterGenerator
 
generateAfterDialog(JIPipeWorkbench, Component, Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.NumberRangeParameterGenerator
 
generateAliasIdFor(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Generates an alias ID for a node
generateAnnotationValue(Collection<JIPipeTextAnnotation>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotationFilterExpression
Generates an annotation value
generateAnnotationValue(Collection<JIPipeTextAnnotation>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.AnnotationGeneratorExpression
Generates an annotation value
generateCode(StringBuilder, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.python.PythonPackageLibraryEnvironment
Installs the library if needed
GenerateColumnAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes
Algorithm that adds or replaces a column by a generated value
GenerateColumnAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.GenerateColumnAlgorithm
Creates a new instance
GenerateColumnAlgorithm(GenerateColumnAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.GenerateColumnAlgorithm
Creates a copy
generateCompendiumFor(JIPipeNodeInfo, boolean) - Method in class org.hkijena.jipipe.ui.documentation.JIPipeAlgorithmCompendiumUI
 
generateCompendiumFor(T, boolean) - Method in class org.hkijena.jipipe.ui.documentation.JIPipeCompendiumUI
Generates the compendium page for the item
generateCompendiumFor(JIPipeDataInfo, boolean) - Method in class org.hkijena.jipipe.ui.documentation.JIPipeDataTypeCompendiumUI
 
generateCondaConfig() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
Generates the configuration for the conda environment
generateDataBatchesDryRun(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationStepAlgorithm
Deprecated.
use generateDataBatchesGenerationResult
generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.looping.LoopStartNode
Deprecated.
 
generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm
 
generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm
 
generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm
 
generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm
 
generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm
 
generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm
 
generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm
 
generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationStepAlgorithm
Generates data batches.
generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.forms.algorithms.IteratingFormProcessorAlgorithm
 
generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.forms.algorithms.MergingFormProcessorAlgorithm
 
generateDataBatchesGenerationResult(List<JIPipeInputDataSlot>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.forms.algorithms.SimpleIteratingFormProcessorAlgorithm
 
GeneratedColumn() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator.GeneratedColumn
 
GeneratedColumn(String, JIPipeExpressionParameter) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator.GeneratedColumn
 
GeneratedColumn(KeyValueThresholdPartitionGenerator.GeneratedColumn) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator.GeneratedColumn
 
GenerateDocumentationUtil - Class in org.hkijena.jipipe.extensions.clij2
 
GenerateDocumentationUtil() - Constructor for class org.hkijena.jipipe.extensions.clij2.GenerateDocumentationUtil
 
GeneratedParameters - Class in org.hkijena.jipipe.extensions.multiparameters.nodes
Encapsulates the generation of parameters
GeneratedParameters(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.GeneratedParameters
 
GeneratedParameters(GeneratedParameters) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.GeneratedParameters
 
generateEnvironment() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstaller
Generates the final environment.
generateEnvironment() - Method in class org.hkijena.jipipe.extensions.cellpose.installers.CellposeEasyInstaller
 
generateEnvironment() - Method in class org.hkijena.jipipe.extensions.ilastik.installers.IlastikEasyInstaller
 
generateEnvironment() - Method in class org.hkijena.jipipe.extensions.omnipose.installers.OmniposeEasyInstaller
 
generateEnvironment() - Method in class org.hkijena.jipipe.extensions.python.adapter.JIPipePythonAdapterLibraryEnvironmentInstaller
 
generateEnvironment() - Method in class org.hkijena.jipipe.extensions.python.installers.PythonEasyInstaller
 
generateEnvironment(SelectSystemPythonInstaller.Configuration) - Static method in class org.hkijena.jipipe.extensions.python.installers.SelectSystemPythonInstaller
 
generateEnvironment() - Method in class org.hkijena.jipipe.extensions.r.installers.REasyInstaller
 
generateForEachIndexedZCTSlice(ImagePlus, BiFunction<ImageProcessor, ImageSliceIndex, ImageProcessor>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Runs the function for each Z, C, and T slice.
GenerateFromMathExpression2D - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
Wrapper around ImageProcessor
GenerateFromMathExpression2D(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateFromMathExpression2D
Instantiates a new node type.
GenerateFromMathExpression2D(GenerateFromMathExpression2D) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateFromMathExpression2D
Instantiates a new node type.
generateLineVertices(float, float, float, float, float, float, float, float, int) - Static method in class org.hkijena.jipipe.extensions.scene3d.utils.Scene3DUtils
 
GenerateLUTImageFromColorMap - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate
Wrapper around ImageProcessor
GenerateLUTImageFromColorMap(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap
Instantiates a new node type.
GenerateLUTImageFromColorMap(GenerateLUTImageFromColorMap) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap
Instantiates a new node type.
GenerateMissingImageFromMathExpression2D - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate
Wrapper around ImageProcessor
GenerateMissingImageFromMathExpression2D(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
Instantiates a new node type.
GenerateMissingImageFromMathExpression2D(GenerateMissingImageFromMathExpression2D) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
Instantiates a new node type.
GenerateMissingRoiListsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate
 
GenerateMissingRoiListsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.GenerateMissingRoiListsAlgorithm
 
GenerateMissingRoiListsAlgorithm(GenerateMissingRoiListsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.GenerateMissingRoiListsAlgorithm
 
GenerateMissingTablesAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate
Deprecated.
GenerateMissingTablesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm
Deprecated.
 
GenerateMissingTablesAlgorithm(GenerateMissingTablesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm
Deprecated.
 
GenerateMissingTablesAlgorithm2 - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate
 
GenerateMissingTablesAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm2
 
GenerateMissingTablesAlgorithm2(GenerateMissingTablesAlgorithm2) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm2
 
GenerateMissingZeroImage - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate
Wrapper around ImageProcessor
GenerateMissingZeroImage(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingZeroImage
Instantiates a new node type.
GenerateMissingZeroImage(GenerateMissingZeroImage) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingZeroImage
Instantiates a new node type.
generateName(JIPipeDataTable, int, Set<String>) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter
Generates a unique string based on metadata for the selected row
generateName(JIPipeDataTableMetadata, int, Set<String>) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter
 
generateParameterDocumentation(JIPipeParameterAccess, JIPipeParameterTree) - Static method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
GenerateParametersFromExpressionAlgorithm - Class in org.hkijena.jipipe.extensions.multiparameters.nodes
 
GenerateParametersFromExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm
 
GenerateParametersFromExpressionAlgorithm(GenerateParametersFromExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm
 
GenerateParametersFromExpressionAlgorithm.Column - Class in org.hkijena.jipipe.extensions.multiparameters.nodes
 
generatePath(JIPipeDataTable, int, Set<String>) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter
Generates a unique path based on metadata for the selected row
generatePath(JIPipeDataTableMetadata, int, Set<String>) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter
 
generatePath(Path, Path, Map<String, Path>, String, int, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.expressions.DataExportExpressionParameter
 
generatePreview(ImagePlus, ColorSpace, int, int) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Generates a preview for a colored image with color space
GenerateRandomUniqueAnnotation - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Generates annotations from filenames
GenerateRandomUniqueAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.GenerateRandomUniqueAnnotation
New instance
GenerateRandomUniqueAnnotation(GenerateRandomUniqueAnnotation) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.GenerateRandomUniqueAnnotation
Copies the algorithm
generateRoi3dRelationRowMeasurements(ImageHandler, int, int, int, boolean, ResultsTableData, ROI3D, ROI3D, int, String) - Static method in class org.hkijena.jipipe.extensions.ij3d.IJ3DUtils
 
generateRoi3dRowMeasurements(ImageHandler, int, ROI3D, int, boolean, ResultsTableData, int, String) - Static method in class org.hkijena.jipipe.extensions.ij3d.IJ3DUtils
 
generateROIRelationRowMeasurements(ImagePlus, int, int, int, boolean, ResultsTableData, Roi, Roi, int, String) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.ImageJAlgorithmUtils
 
generateROIRowMeasurements(ImagePlus, int, Roi, ImageStatisticsSetParameter, boolean, ResultsTableData, int, String) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.ImageJAlgorithmUtils
 
generateRotations(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
generateSlice(int, int, int, double, boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
Generates a slice
GenerateStructureElement2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate
Wrapper around ImageProcessor
GenerateStructureElement2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateStructureElement2DAlgorithm
Instantiates a new node type.
GenerateStructureElement2DAlgorithm(GenerateStructureElement2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateStructureElement2DAlgorithm
Instantiates a new node type.
GenerateStructureElement3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate
Wrapper around ImageProcessor
GenerateStructureElement3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateStructureElement3DAlgorithm
Instantiates a new node type.
GenerateStructureElement3DAlgorithm(GenerateStructureElement3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateStructureElement3DAlgorithm
Instantiates a new node type.
GenerateTableFromExpressionAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes
Algorithm that adds or replaces a column by a generated value
GenerateTableFromExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.GenerateTableFromExpressionAlgorithm
Creates a new instance
GenerateTableFromExpressionAlgorithm(GenerateTableFromExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.GenerateTableFromExpressionAlgorithm
Creates a copy
generateTempDirectory(String) - Static method in class org.hkijena.jipipe.extensions.settings.RuntimeSettings
Generates a temporary directory
generateTempFile(String, String) - Static method in class org.hkijena.jipipe.extensions.settings.RuntimeSettings
Generates a temporary directory
generateTextAnnotation(Collection<JIPipeTextAnnotation>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.NamedTextAnnotationGeneratorExpression
Generates an annotation
generateThumbnail(ImagePlus, ColorSpace, int, int) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Generates a thumbnail for a colored image with color space
generateUnindexedVertexNormalsFlat(float[]) - Static method in class org.hkijena.jipipe.extensions.scene3d.utils.Scene3DUtils
 
GenerateUniqueAnnotation - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Generates annotations from filenames
GenerateUniqueAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.GenerateUniqueAnnotation
New instance
GenerateUniqueAnnotation(GenerateUniqueAnnotation) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.GenerateUniqueAnnotation
Copies the algorithm
generateUVSphereVertices(float, float, float, float, float, float, int) - Static method in class org.hkijena.jipipe.extensions.scene3d.utils.Scene3DUtils
 
generateValidityReport(JIPipeValidationReportContext) - Method in interface org.hkijena.jipipe.api.validation.JIPipeValidatable
Generates a report for this object
GenerateVectorFromMathExpression - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
Wrapper around ImageProcessor
GenerateVectorFromMathExpression(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
Instantiates a new node type.
GenerateVectorFromMathExpression(GenerateVectorFromMathExpression) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
Instantiates a new node type.
generateWholeCompendium(boolean) - Method in class org.hkijena.jipipe.ui.documentation.JIPipeCompendiumUI
Generates a document that contains the whole compendium
GenerateZeroImage - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate
Wrapper around ImageProcessor
GenerateZeroImage(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateZeroImage
Instantiates a new node type.
GenerateZeroImage(GenerateZeroImage) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateZeroImage
Instantiates a new node type.
GenericNotificationButton - Class in org.hkijena.jipipe.ui.notifications
UI that monitors the queue
GenericNotificationButton(JIPipeWorkbench, JIPipeNotificationInbox) - Constructor for class org.hkijena.jipipe.ui.notifications.GenericNotificationButton
 
GenericNotificationInboxUI - Class in org.hkijena.jipipe.ui.notifications
 
GenericNotificationInboxUI(JIPipeWorkbench, JIPipeNotificationInbox) - Constructor for class org.hkijena.jipipe.ui.notifications.GenericNotificationInboxUI
 
GenericNotificationUI - Class in org.hkijena.jipipe.ui.notifications
 
GenericNotificationUI(GenericNotificationInboxUI, JIPipeNotification, boolean, boolean) - Constructor for class org.hkijena.jipipe.ui.notifications.GenericNotificationUI
 
GenericOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
GenericOperator(String, int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.GenericOperator
 
GenericPredicateOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
GenericPredicateOperator(String, int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.GenericPredicateOperator
 
GeodesicDistanceMap2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap
 
GeodesicDistanceMap2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.GeodesicDistanceMap2DAlgorithm
Instantiates a new node type.
GeodesicDistanceMap2DAlgorithm(GeodesicDistanceMap2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.GeodesicDistanceMap2DAlgorithm
Instantiates a new node type.
get() - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore
 
get(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
get(Class<T>) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess
 
get() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDummyParameterCollection
 
get(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Returns the parameter with key
get(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
 
get(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess
 
get(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
get(Class<T>) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Gets the parameter value
get(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
get(int) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration
Returns a runtime partition with the specific index
get(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.LUTData
 
get(ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.imp.utils.ImpImageDataBuilder
 
get(int, int, int) - Method in class org.hkijena.jipipe.extensions.imp.utils.ImpImageDataBuilder
 
get(Class<U>) - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterItemParameterAccess
 
get(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterInputAccess
 
get(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterOutputAccess
 
get(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterParameterAccess
 
get(Class<U>) - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
 
get(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterKeyAccess
 
get(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterValueAccess
 
get(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableCellAccess
 
get(int) - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
get() - Method in class org.hkijena.jipipe.utils.data.OwningStore
 
get() - Method in interface org.hkijena.jipipe.utils.data.Store
Gets the stored data or null if the data is not present
get() - Method in class org.hkijena.jipipe.utils.data.WeakStore
 
get() - Method in class org.hkijena.jipipe.utils.InstantFuture
 
get(long, TimeUnit) - Method in class org.hkijena.jipipe.utils.InstantFuture
 
getA1() - Method in class org.hkijena.jipipe.ui.grapheditor.general.connections.RectangularLine
 
getAbsoluteExecutablePath() - Method in class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
getAbsoluteExecutablePath() - Method in class org.hkijena.jipipe.extensions.python.PythonEnvironment
 
getAbsoluteFileName() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileDataSource
 
getAbsoluteFileNames() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileListDataSource
 
getAbsoluteFolderPath() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderDataSource
 
getAbsoluteFolderPaths() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderListDataSource
 
getAbsoluteInstallationPath() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstaller
 
getAbsoluteLibraryDirectory() - Method in class org.hkijena.jipipe.extensions.python.PythonPackageLibraryEnvironment
 
getAbsolutePath() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathDataSource
 
getAbsolutePaths() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathListDataSource
 
getAcceptedDataType() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
getAcceptedDataTypeId() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
getAcceptedDataTypeInfo() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Return the info about the slot's data type
getAcceptedModuleFieldClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.DataSlotModuleInput
 
getAcceptedModuleFieldClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.DataSlotModuleOutput
 
getAcceptedModuleFieldClass() - Method in interface org.hkijena.jipipe.extensions.imagej2.io.ImageJ2ModuleIO
The class used to store data inside a module
getAcceptedModuleFieldClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.ParameterImageJ2ModuleInput
 
getAcceptedModuleFieldClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput
 
getAcceptedModuleFieldClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.ServiceImageJ2ModuleIO
 
getAccess() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.BeforeAddParameterEvent
 
getAccessList() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess
 
getAccessor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm.Entry
 
getAccessor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm.Entry
 
getAccessorId() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OMEAccessorParameter
 
getAccumulationFunction() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
getAccumulatorThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.LinesHoughDetection2DAlgorithm
 
getAcknowledgements() - Method in class org.hkijena.jipipe.api.JIPipeMetadata
Gets the list of acknowledged authors
getAcknowledgements() - Method in class org.hkijena.jipipe.extensions.cellpose.CellposePlugin
 
getAcknowledgements() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJPlugin
 
getAcknowledgements() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingPlugin
 
getAcknowledgements() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.TrackMatePlugin
 
getAcknowledgements() - Method in class org.hkijena.jipipe.extensions.ijweka.WekaPlugin
 
getAcknowledgements() - Method in class org.hkijena.jipipe.extensions.ilastik.IlastikPlugin
 
getAcknowledgements() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2Plugin
 
getAcknowledgements() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.ImageJAlgorithmsPlugin
 
getAcknowledgements() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesPlugin
 
getAcknowledgements() - Method in class org.hkijena.jipipe.extensions.omero.OMEROPlugin
 
getAcknowledgements() - Method in class org.hkijena.jipipe.extensions.omnipose.OmniposePlugin
 
getAcknowledgements() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Returns additionally cited authors
getAction() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction
 
getAction() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI.NodeUIActionRequestedEvent
 
getActions() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
getActions() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
getActions() - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Band
 
getActivate() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
getActivatedExtensions() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
List of all activated extensions
getActivatedExtensions() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry.Settings
 
getActiveViewerPanel() - Static method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
getAdaptiveParameter(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
getAdaptiveParameterSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm
 
getAdaptiveParameterSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm
 
getAdaptiveParameterSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm
 
getAdaptiveParameterSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm
 
getAdaptiveParameterSettings() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParametersAlgorithm
 
getAddableAlgorithms() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
getAddBorder2DAlgorithm() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm
 
getAddDataToString() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ConvertToAnnotationTable
 
getAddedSlots() - Method in class org.hkijena.jipipe.ui.components.AddAlgorithmSlotPanel
 
getAddedTables() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableMetadata
 
getAddInputSlotArea() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
getAdditionalCitations() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
A list of additional citations
getAdditionalCitations() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
getAdditionalCitations() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
Returns a list of additional citations
getAdditionalCitations() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
getAdditionalData() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
getAdditionalFiles() - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail
 
getAdditionalMetadata() - Method in class org.hkijena.jipipe.api.JIPipeProject
 
getAdditionalMetadata() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
getAdditionalMetadata(Class<T>, String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns additional metadata or null if it does not exist
getAdditionalUIVariables() - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionParameter
 
getAdditionalVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.InputEntry
 
getAddOutputSlotArea() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
getAffiliations() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
getAlgorithm() - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration
 
getAlgorithm() - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantUI
 
getAlgorithm() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
 
getAlgorithm() - Method in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmWindow
 
getAlgorithm() - Method in class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExtensionSingleAlgorithmSelectionPanelUI
 
getAlgorithmCompartment(JIPipeProjectWorkbench, JIPipeDataSlot) - Static method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotPreview
Returns the compartment name of the algorithm that generated the data
getAlgorithmCompartmentName() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotRowUI
Returns the compartment name of the algorithm that generated the data
getAlgorithmDocumentation(JIPipeNodeInfo) - Static method in class org.hkijena.jipipe.utils.TooltipUtils
 
getAlgorithmDocumentation(JIPipeGraphNode) - Static method in class org.hkijena.jipipe.utils.TooltipUtils
 
getAlgorithmFinderSettings() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
getAlgorithmId() - Method in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmWindow
 
getAlgorithmName() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImagePlusResultImportRun
 
getAlgorithmName() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.OMEImageResultImportRun
 
getAlgorithmName() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotRowUI
Returns the name of the algorithm that generated the data
getAlgorithmTooltip(JIPipeNodeInfo) - Static method in class org.hkijena.jipipe.utils.TooltipUtils
Creates a tooltip for an algorithm.
getAlgorithmTooltip(JIPipeNodeInfo, boolean) - Static method in class org.hkijena.jipipe.utils.TooltipUtils
Creates a tooltip for an algorithm
getAlgorithmTooltip(JIPipeNodeTemplate, boolean) - Static method in class org.hkijena.jipipe.utils.TooltipUtils
Creates a tooltip for an algorithm
getAlgorithmTooltip(JIPipeGraphNode, boolean) - Static method in class org.hkijena.jipipe.utils.TooltipUtils
Creates a tooltip for an algorithm
getAliases() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
getAliases() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
A list of alternative menu locations
getAliases() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
getAliases() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2AlgorithmInfo
 
getAliasesOf(Class<? extends JIPipeGraphNode>) - Static method in class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo
Gets alternative menu locations
getAliasIdInParentGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the alias ID of this node.
getAliasIdOf(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Gets the alias ID of a node A unique alias ID is generated if none is assigned yet
getAlignment(int) - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Determines the desired alignment for this view along an axis.
getAllChildParameters(Object) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Returns all child parameters of the entry If the entry is an JIPipeParameterAccess, it is returned.
getAllData(Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets all the data stored in a specific row.
getAllDataAnnotations() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets the list of all data annotations
getAllDependencies() - Method in class org.hkijena.jipipe.extensions.imp.ImpPlugin
 
getAllDependencies() - Method in interface org.hkijena.jipipe.JIPipeDependency
Gets a flat list of all dependencies (no nested dependencies) This method returns the dependencies to be stored into JSON JIPipeMutableDependency instances are returned instead of the original type and the thumbnail metadata is removed
getAllDependencies(boolean) - Method in interface org.hkijena.jipipe.JIPipeDependency
Gets a flat list of all dependencies (no nested dependencies) This method returns the dependencies to be stored into JSON JIPipeMutableDependency instances are returned instead of the original type and the thumbnail metadata is removed
getAllDependenciesOf(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
Returns the dependency IDs that are dependencies of the provided extension ID
getAllDependentsOf(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
Returns the dependency IDs that are depentents of the provided extension ID
getAllDescriptions() - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.Measurement
 
getAllImageJUpdateSiteDependencies() - Method in interface org.hkijena.jipipe.JIPipeDependency
Gets a flat list of all ImageJ update site dependencies (including transitive dependencies) This method returns the dependencies to be stored into JSON
getAllowedInputSlotTypes() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
getAllowedInputSlotTypes() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
getAllowedOutputSlotTypes() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
getAllowedOutputSlotTypes() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
getAllowedTypes() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
 
getAllowedValues() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicEnumParameter
Returns the list of allowed choices Please note that if isEditable() is true, other options might be available
getAllowedValues() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameter
 
getAllPredecessorNodes(JIPipeGraphNode, List<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns ALL predecessor algorithms of an algorithm.
getAllPredecessors(Graph<V, E>, V) - Static method in class org.hkijena.jipipe.utils.GraphUtils
Gets all parent nodes of the vertex
getAllPredecessors(V) - Method in class org.hkijena.jipipe.utils.WeakPredecessorInspector
 
getAllRegisteredDisplayOperations(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
 
getAllRegisteredImportOperations(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
 
getAllSuccessors(Graph<V, E>, V) - Static method in class org.hkijena.jipipe.utils.GraphUtils
Gets all successors of the vertex
getAllTextAnnotations() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets the list of all text annotations
getAlpha() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.EdgeFilter3DAlgorithm
 
getAlpha() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.SymmetryFilter3DAlgorithm
 
getAlpha() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures
 
getAlphaLutEditors() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.OpacityManagerPlugin3D
 
getAlternativeName() - Method in class org.hkijena.jipipe.api.nodes.JIPipeNodeMenuLocation
 
getAltText() - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Returns the text to display if the image can't be loaded.
getAnalysisResults() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.CustomColoc2.ColocResult
 
getAnchor() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters
 
getAnchor() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
getAnchor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
getAnchor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.CanvasEqualizer
 
getAnchor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm
 
getAnchor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm
 
getAnchor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm
 
getAnchor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
 
getAnchor() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
 
getAnchor() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
getAngle() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ArrowAnnotationGraphNode
 
getAngle() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
getAngle() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RotateRoiAlgorithm
 
getAngle() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm
 
getAnimationFPSControl() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
getAnimationFPSControl() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
getAnisotropy() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationTweaksSettings
 
getAnisotropy() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationEnhancementSettings_Old
Deprecated.
 
getAnisotropy() - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationTweaksSettings
 
getAnnotateC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
getAnnotateC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm
 
getAnnotateT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
getAnnotateT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm
 
getAnnotateWithCurrentData() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractDataAnnotation
 
getAnnotateZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
getAnnotateZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm
 
getAnnotationBoundingHeight() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
getAnnotationBoundingWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
getAnnotationC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm
 
getAnnotationC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm
 
getAnnotationC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
getAnnotationCLocation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
getAnnotationColumnChannelIndex() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsAlgorithm
Deprecated.
 
getAnnotationColumnFilter() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
getAnnotationColumns() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Deprecated.
use getTextAnnotationColumns()
getAnnotationColumns() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
getAnnotationColumns() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableMetadata
 
getAnnotationColumnSlotName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsAlgorithm
Deprecated.
 
getAnnotationExpression() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveAnnotationAlgorithm
 
getAnnotationExpression() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotationToPath
 
getAnnotationFilter() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SimplifyAnnotationsAlgorithm
 
getAnnotationGenerator() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertTracksToRoiNode
 
getAnnotationGenerator() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SplitSpotsNode
 
getAnnotationGenerator() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.SplitTracksNode
 
getAnnotationId() - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROAnnotationReferenceData
 
getAnnotationIndex() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm
 
getAnnotationIOSettings() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.BooleanFormData
 
getAnnotationIOSettings() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.DoubleFormData
 
getAnnotationIOSettings() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.EnumFormData
 
getAnnotationIOSettings() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.IntegerFormData
 
getAnnotationIOSettings() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
getAnnotationIOSettings() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.StringFormData
 
getAnnotationList() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.InputEntry
 
getAnnotationMap(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Deprecated.
Use getTextAnnotationMap instead
getAnnotationMap() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
Mutable access to the annotations
getAnnotationMatchingMethod() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
getAnnotationMatchingMethod() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
getAnnotationMatchingMethod() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
getAnnotationMatchingMethod() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
getAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm
 
getAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm
 
getAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm
 
getAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm
 
getAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.AnnotateWithJsonDataAlgorithm
 
getAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.AnnotateWithTextDataAlgorithm
 
getAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.AnnotateWithXPathDataAlgorithm
 
getAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateDataWithTableValues
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithmIterationStepGenerationSettings
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByExpression
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithData
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithDataString
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithSourceSlot
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.DataAnnotationToStringAnnotation
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractAndReplaceAnnotation
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.GenerateRandomUniqueAnnotation
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.GenerateUniqueAnnotation
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RenameAnnotation
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RenameDataAnnotation
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.SimplePathAnnotationGenerator
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.forms.utils.SingleAnnotationIOSettings
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.ParametersToAnnotationsAlgorithm
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingPythonScriptAlgorithm
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingPythonScriptAlgorithm
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.python.algorithms.PythonScriptAlgorithm
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.r.algorithms.IteratingRScriptAlgorithm
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.r.algorithms.MergingRScriptAlgorithm
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm
 
getAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnsToAnnotationsAlgorithm
 
getAnnotationName() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByProjectPaths.Entry
 
getAnnotationName() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithData
 
getAnnotationName() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SetSingleAnnotation
 
getAnnotationName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm.Entry
 
getAnnotationName() - Method in class org.hkijena.jipipe.extensions.omero.parameters.OMEROKeyValuePairToAnnotationImporter
 
getAnnotationName() - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.AnnotateWithJsonDataAlgorithm.Entry
 
getAnnotationName() - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.AnnotateWithTextDataAlgorithm.Entry
 
getAnnotationName() - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.AnnotateWithXPathDataAlgorithm.Entry
 
getAnnotationName() - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateDataWithTableValues.AnnotationSettings
 
getAnnotationNameFilter() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveArrayAnnotationsAlgorithm
 
getAnnotationNameFilter() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveNAAnnotationColumnsAlgorithm
 
getAnnotationNameFilter() - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AddAnnotationColumnsAlgorithm
 
getAnnotationNameQuery() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractDataAnnotation
 
getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess
 
getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
 
getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess
 
getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
getAnnotationOfType(Class<T>) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Gets an annotation for this parameter
getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterItemParameterAccess
 
getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterInputAccess
 
getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterOutputAccess
 
getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterParameterAccess
 
getAnnotationOfType(Class<U>) - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
 
getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterKeyAccess
 
getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterValueAccess
 
getAnnotationOfType(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableCellAccess
 
getAnnotationPrefix() - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AddAnnotationColumnsAlgorithm
 
getAnnotationRemovalMode() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SimplifyAnnotationsAlgorithm
 
getAnnotations() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess
 
getAnnotations() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
 
getAnnotations() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess
 
getAnnotations() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
getAnnotations() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Gets all available annotations for this parameter
getAnnotations() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
getAnnotations() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByExpression
 
getAnnotations() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataRowFolder
 
getAnnotations() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnnotateByImageStatisticsExpressionAlgorithm
 
getAnnotations() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterItemParameterAccess
 
getAnnotations() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterInputAccess
 
getAnnotations() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterOutputAccess
 
getAnnotations() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterParameterAccess
 
getAnnotations() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
 
getAnnotations() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterKeyAccess
 
getAnnotations() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterValueAccess
 
getAnnotations() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableCellAccess
 
getAnnotations(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.AnnotationTableData
Gets all annotations at the specified row
getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess
 
getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
 
getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess
 
getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
getAnnotationsOfType(Class<T>) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Gets annotations for this parameter (including the field class) Please note that there is no guarantee that repeatable annotations are resolved properly.
getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterItemParameterAccess
 
getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterInputAccess
 
getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterOutputAccess
 
getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterParameterAccess
 
getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
 
getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterKeyAccess
 
getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterValueAccess
 
getAnnotationsOfType(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableCellAccess
 
getAnnotationSupplier() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
 
getAnnotationT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm
 
getAnnotationT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm
 
getAnnotationT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
getAnnotationTLocation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
getAnnotationType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
getAnnotationType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm
 
getAnnotationValue() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByProjectPaths.Entry
 
getAnnotationValue() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SetSingleAnnotation
 
getAnnotationValue() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.ExplodeRoi3DListAlgorithm
 
getAnnotationValue() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.split.ExplodeRoiAlgorithm
 
getAnnotationValue() - Method in class org.hkijena.jipipe.extensions.omero.parameters.OMEROKeyValuePairToAnnotationImporter
 
getAnnotationValue() - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateDataWithTableValues.AnnotationSettings
 
getAnnotationX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm
 
getAnnotationX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
getAnnotationXLocation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
getAnnotationY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm
 
getAnnotationY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
getAnnotationYLocation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
getAnnotationZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm
 
getAnnotationZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm
 
getAnnotationZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
getAnnotationZLocation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
getAppend() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
getArcHeight() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm
 
getArcWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm
 
getArgIndex() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo.OutputTableColumnInfo
 
getArguments() - Method in class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
getArguments() - Method in class org.hkijena.jipipe.extensions.python.PythonEnvironment
 
getArguments() - Method in class org.hkijena.jipipe.extensions.r.REnvironment
 
getArguments() - Method in class org.hkijena.jipipe.extensions.settings.DownloadSettings.DownloadEnvironment
 
getArray() - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
Returns the value as array or an array with the value if it is not an array.
getArrowSize() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ArrowAnnotationGraphNode
 
getArtifactPaint() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Returns the paint used to color the median and average markers.
getAssembleTemplatesBackground() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
getAssembleTemplatesOutput() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
getAttachment(Class<T>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns an attachment or null if it does not exist
getAttachments() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
getAttitudeExpression() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm
 
getAttribute() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm
 
getAttribute() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm
 
getAttributes() - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Fetches the attributes to use when rendering.
getAuthors() - Method in class org.hkijena.jipipe.api.JIPipeMetadata
 
getAuthors() - Method in class org.hkijena.jipipe.extensions.JIPipePrepackagedDefaultJavaPlugin
 
getAuthors() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
 
getAutoHideEdgeDistanceThreshold() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
getAutoHideEdgeOverlapThreshold() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
getAutoLayout() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
getAutoThresholding() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm
 
getAutoThresholding() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
getAutoThresholding() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
getAutoThresholdMethod() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.NucleiSegmentation3DAlgorithm
 
getAvailableData() - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
Contains single-column series that will be later spliced together depending on the user's settings
getAvailableExporters(Class<? extends JIPipeData>, boolean) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry
Returns all exporter instances that
getAvailableIcons() - Static method in class org.hkijena.jipipe.extensions.parameters.library.references.IconRefParameterEditorUI
 
getAvailableImporters(Class<? extends JIPipeData>, boolean) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry
Returns all importer instances that
getAvailableItems() - Method in class org.hkijena.jipipe.ui.components.pickers.PickerDialog
 
getAvailablePackages() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstaller
 
getAvailablePackages() - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderRun
 
getAvailablePackages() - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderRun
 
getAvailableParameters() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
Gets the available parameters in the graph
getAvailableParameters() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionVisibilities
An optional reference of all available parameters.
getAvailableSources(JIPipeDataSlot, boolean, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns all available sources for an input slot.
getAvailableTargets(JIPipeDataSlot, boolean, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns all available target for an output slot Does not check for cycles.
getAvailableTypes() - Method in class org.hkijena.jipipe.ui.components.AddAlgorithmSlotPanel
 
getAverageEdgeColor() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
getAverageVertexColor() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
getAviCompression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImage2Algorithm
 
getAviCompression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
getAviCompression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm
 
getAWTWindowTitle(Window) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
getAxes() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.ExportIlastikHDF5ImageAlgorithm
 
getAxes() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.ImportIlastikHDF5ImageAlgorithm
 
getAxisVworld(Vector3d, Vector3d) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Calculates from the specified axis in image plate coordinate system the corresponding vector in the vworld coordinate system.
getAzimuthExpression() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm
 
getB1() - Method in class org.hkijena.jipipe.ui.grapheditor.general.connections.RectangularLine
 
getBackground() - Method in enum org.hkijena.jipipe.api.notifications.JIPipeNotificationAction.Style
 
getBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
 
getBackground() - Method in enum org.hkijena.jipipe.ui.components.MessagePanel.MessageType
 
getBackgroundColor() - Method in class org.hkijena.jipipe.extensions.core.nodes.JIPipeCommentNode
 
getBackgroundColor() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
getBackgroundColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
getBackgroundColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
getBackgroundColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToRGBAlgorithm
 
getBackgroundColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
getBackgroundColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
getBackgroundColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
getBackgroundColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.CanvasEqualizer
 
getBackgroundColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm
 
getBackgroundColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm
 
getBackgroundColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm
 
getBackgroundColor() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
getBackgroundImage() - Method in class org.hkijena.jipipe.ui.components.ImageFrame
 
getBackgroundType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm
 
getBackgroundValue() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ApplyDistanceTransform2DAlgorithm
 
getBackupDelay() - Method in class org.hkijena.jipipe.extensions.settings.BackupSettings
 
getBackupItemList() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItemCollection
 
getBackupTime() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItem
 
getBands() - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Task
 
getBandwidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
getBarColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
getBarColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
getBarColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
getBarThickness() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
getBarThickness() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
getBarThicknessInPixels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
getBaseDirectory() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.BaseDirectoryChangedEvent
 
getBaseDirectory() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the current work directory of this algorithm.
getBaseDirectoryChangedEventEmitter() - Method in class org.hkijena.jipipe.api.JIPipeProject
 
getBaseDirectoryChangedEventEmitter() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
 
getBaseIcon() - Method in class org.hkijena.jipipe.ui.components.icons.OverlayColorIcon
 
getBaselineOffset() - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
getBaseName() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.GenerateUniqueAnnotation
 
getBaseName() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.TemporaryFolderDataSource
 
getBaseName() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Stack2DExporterRun
 
getBasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
 
getBaseRun() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun
 
getBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
getBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.grouping.JsonAlgorithm
 
getBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
getBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.looping.LoopStartNode
Deprecated.
 
getBatchSize() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
getBatchSize() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeTrainingTweaksSettings
 
getBatchSize() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationPerformanceSettings_Old
Deprecated.
 
getBatchSize() - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeTrainingTweaksSettings
 
getBeforeAddParameterEventEmitter() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
 
getBestConfigurationOnSameDevice(Window) - Static method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
getBestNextVertex() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph
 
getBinAxisFontSize() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
getBinAxisLabel() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
getBinAxisMaximum() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
getBinAxisMinimum() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
getBins() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer
 
getBins() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
getBioFormatsCompression() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesSettings
 
getBitDepth() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.BitDepth
 
getBitDepth() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.OptionalBitDepth
 
getBitDepthAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
getBlack() - Method in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
Returns the black color.
getBlack() - Method in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
Returns the black color.
getBlendMode() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
getBlendMode() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageBlendLayer
 
getBlockedNotifications() - Method in class org.hkijena.jipipe.extensions.settings.NotificationUISettings
 
getBlockedTemplateNames() - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry
 
getBlockRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer
 
getBlockRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm
 
getBlockRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm
 
getBlueThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
getBlueYellowThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
getBody() - Method in class org.hkijena.jipipe.extensions.parameters.library.markup.HTMLText
 
getBookmarks() - Method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
 
getBorder() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.CropLabelsAlgorithm
 
getBorderColor() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory
 
getBorderColor() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory
 
getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory
 
getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory
 
getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory
 
getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory
 
getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory
 
getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory
 
getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
getBorderColor() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
getBorderColor() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry
 
getBorderColor() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory
The border color for algorithm nodes
getBorderColor() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
getBorderColor() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.TextBoxAnnotationGraphNode.ShapeParameters
 
getBorderColor() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsNodeTypeCategory
 
getBorderColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelColorMapIcon
 
getBorderColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm
 
getBorderColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.CanvasParameters
 
getBorderColor() - Method in class org.hkijena.jipipe.extensions.parameters.library.colors.ColorMapIcon
 
getBorderColor() - Method in interface org.hkijena.jipipe.ui.components.icons.ColorIcon
 
getBorderColor() - Method in class org.hkijena.jipipe.ui.components.icons.OverlayColorIcon
 
getBorderColor() - Method in class org.hkijena.jipipe.ui.components.icons.SolidColorIcon
 
getBorderColor() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
getBorderColorFor(JIPipeNodeInfo) - Static method in class org.hkijena.jipipe.utils.UIUtils
Returns a border color for JIPipeNodeInfo
getBorderDefinition() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.RemoveBorderRoisAlgorithm
 
getBorderDistance() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm
 
getBorderDistance() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.RemoveBorderFilaments
 
getBorderInsets(Component, Insets) - Method in class org.hkijena.jipipe.utils.ui.RoundedLineBorder
 
getBorderMode() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling2DSettings
 
getBorderMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm
 
getBorderMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
getBorderMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
getBorderSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.CanvasParameters
 
getBorderThickness() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode
 
getBorderThickness() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode
 
getBorderThickness() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
getBorderThickness() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.TextBoxAnnotationGraphNode
 
getBorderThickness() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.TextBoxAnnotationGraphNode.ShapeParameters
 
getBorderWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
getBorderWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.MontageToStackAlgorithm
 
getBorderWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
getBottom() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
 
getBottom() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.InnerMargin
 
getBottom() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
getBottomIcon() - Method in class org.hkijena.jipipe.ui.components.icons.AnimatedIcon
 
getBottomY() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
Get the Y location of the bottom part
getBoundary() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.MirrorImageJ2OutOfBoundsFactoryData
 
getBounds() - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
Gets the bounds of the 3D ROI
getBounds() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Returns the bounds of area described by the Roi
getBoundsXY() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
getBrightnessThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
getBrowseFacility() - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROGateway
 
getButton() - Method in class org.hkijena.jipipe.ui.components.ColorChooserButton.ColorChosenEvent
 
getButton() - Method in class org.hkijena.jipipe.ui.components.ribbon.LargeButtonAction
 
getButton() - Method in class org.hkijena.jipipe.ui.components.ribbon.LargeToggleButtonAction
 
getButton() - Method in class org.hkijena.jipipe.ui.components.ribbon.SmallButtonAction
 
getButton() - Method in class org.hkijena.jipipe.ui.components.ribbon.SmallToggleButtonAction
 
getById(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Returns the data class with specified ID
getC() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
 
getC() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndices
 
getCache() - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.ClearedEvent
 
getCache() - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.ModifiedEvent
 
getCache() - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.StoredEvent
 
getCache() - Method in class org.hkijena.jipipe.api.cache.JIPipeCacheClearAllRun
 
getCache() - Method in class org.hkijena.jipipe.api.cache.JIPipeCacheClearOutdatedRun
 
getCache() - Method in class org.hkijena.jipipe.api.JIPipeProject
 
getCacheDataViewerWindow() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.AnnotationInfoPlugin2D
 
getCacheDataViewerWindow() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.AnnotationInfoPlugin3D
 
getCalculatePreviewQueue() - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantUI
 
getCalibrationMode() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJSettings.ContrastEnhancerSettings
 
getCalibrationMode() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm
 
getCalibrationMode() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.CalibrationParameters
 
getCalibrationParameters() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.ImportIlastikHDF5ImageAlgorithm
 
getCalibrationPlugin() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl
 
getCalibrationPlugin() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl
 
getCancelledEventEmitter() - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog
 
getCancelReason() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
getCanvas() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
getCanvas() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIPicker2DTool
 
getCanvas() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.ToolChangedEvent
 
getCanvas() - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.dragdrop.JIPipeCreateNodesFromDraggedDataDragAndDropBehavior
 
getCanvas() - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties.JIPipePipelineSingleAlgorithmSelectionPanelUI
 
getCanvas() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.dragdrop.JIPipeCompartmentGraphDragAndDropBehavior
 
getCanvas() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.properties.JIPipeSingleCompartmentSelectionPanelUI
 
getCanvas() - Method in interface org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphDragAndDropBehavior
Returns the canvas the contains the algorithm nodes
getCanvasAnchor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.CanvasParameters
 
getCanvasBackgroundColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.CanvasParameters
 
getCanvasEqualizer() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
getCanvasParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
getCanvasUI() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.NodeSelectionChangedEvent
 
getCanvasUI() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
getCategories() - Method in class org.hkijena.jipipe.api.JIPipeMetadata
 
getCategories() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJPlugin
 
getCategories() - Method in class org.hkijena.jipipe.extensions.filesystem.FilesystemPlugin
 
getCategories() - Method in class org.hkijena.jipipe.extensions.forms.FormsPlugin
 
getCategories() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsPlugin
 
getCategories() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingPlugin
 
getCategories() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.TrackMatePlugin
 
getCategories() - Method in class org.hkijena.jipipe.extensions.ijweka.WekaPlugin
 
getCategories() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2Plugin
 
getCategories() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.ImageJAlgorithmsPlugin
 
getCategories() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesPlugin
 
getCategories() - Method in class org.hkijena.jipipe.extensions.omero.OMEROPlugin
 
getCategories() - Method in class org.hkijena.jipipe.extensions.scene3d.Scene3DPlugin
 
getCategories() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
The categories of this extension (see PluginCategoriesEnumParameter for predefined values)
getCategory() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
getCategory() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool
 
getCategory() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
getCategory() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool
 
getCategory() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
getCategory() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
getCategory() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
getCategory() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
getCategory() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
getCategory() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
getCategory() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
getCategory() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
getCategory() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry
 
getCategory() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo
 
getCategory() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
getCategory() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Gets the algorithm category
getCategory() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
Returns the algorithm category
getCategory() - Method in class org.hkijena.jipipe.api.nodes.JIPipeNodeMenuLocation
 
getCategory(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
 
getCategory() - Method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry.Sheet
 
getCategory() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
getCategory() - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
getCategory() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D
 
getCategory() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
getCategory() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D
 
getCategory() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D
 
getCategory() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo
 
getCategory() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo
 
getCategory() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
getCategory() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin
The tool panel category where this tool is shown
getCategory() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.AnnotationInfoPlugin2D
 
getCategory() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.GeneralImageViewerPanelPlugin2D
 
getCategory() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawer2DTool
 
getCategory() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
getCategory() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MeasurementDrawerPlugin2D
 
getCategory() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
getCategory() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.AnnotationInfoPlugin3D
 
getCategory() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.GeneralImageViewerPanelPlugin3D
 
getCategory() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.RenderSettingsPlugin3D
 
getCategory() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D
 
getCategory() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2AlgorithmInfo
 
getCategoryAxisFontSize() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CategoryPlotData
 
getCategoryAxisLabel() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CategoryPlotData
 
getCategoryColumns() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.UnMeltTableAlgorithm
 
getCategoryIcon() - Method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry.Sheet
 
getCategoryIcon() - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
getCategoryIcon() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D
 
getCategoryIcon() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
getCategoryIcon() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D
 
getCategoryIcon() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D
 
getCategoryIcon() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin
The icon for the category if a new one must be created
getCategoryIcon() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.AnnotationInfoPlugin2D
 
getCategoryIcon() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.GeneralImageViewerPanelPlugin2D
 
getCategoryIcon() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawer2DTool
 
getCategoryIcon() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
getCategoryIcon() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MeasurementDrawerPlugin2D
 
getCategoryIcon() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
getCategoryIcon() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.AnnotationInfoPlugin3D
 
getCategoryIcon() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.GeneralImageViewerPanelPlugin3D
 
getCategoryIcon() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.RenderSettingsPlugin3D
 
getCategoryIcon() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D
 
getCategoryOf(Class<? extends JIPipeGraphNode>) - Static method in class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo
Returns the category of an algorithm
getCategoryParameter() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
getcAxis() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm
 
getCellEditorValue() - Method in class org.hkijena.jipipe.ui.tableeditor.TableEditor.NumberEditor
 
getCellposeCustomCode() - Static method in class org.hkijena.jipipe.extensions.cellpose.CellposeUtils
 
getCellProbabilityThreshold() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationThresholdSettings
 
getCellProbabilityThreshold() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationThresholdSettings_Old
Deprecated.
 
getCellRenderer() - Method in class org.hkijena.jipipe.ui.components.pickers.PickerDialog
 
getCellRendererFor(JIPipeProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableMetadataRow, JIPipeExportedDataAnnotation) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Returns a cell renderer for dataslot result table
getCenterScale() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
getCenterScale() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
getCenterScale() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
getCenterScale() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ScaleRoiAlgorithm
 
getCenterScale() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
getCenterTranslation(Vector3d) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Retrieves the translation vector which is responsible for centering the view.
getCenterX() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
getCenterX() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
getCenterX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RotateRoiAlgorithm
 
getCenterX() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
getCenterY() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
getCenterY() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
getCenterY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RotateRoiAlgorithm
 
getCenterY() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
getCenterZ() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
getCenterZ() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
getCenterZ() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
getCentroid(Roi) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Gets the centroid of a ROI
getCentroidC() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
getCentroidDouble(Roi) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Gets the centroid of a ROI
getCentroidT() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
getCentroidX() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
getCentroidY() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
getCentroidZ() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
getChamferWeights() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap2DAlgorithm
 
getChamferWeights() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap3DAlgorithm
 
getChamferWeights() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.GeodesicDistanceMap2DAlgorithm
 
getChamferWeights() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.LabelChamferDistanceMap3DAlgorithm
 
getChannel() - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
getChannel() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.NonSpatialPoint3d
 
getChannel() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D.CompositeLayer
 
getChannel1Name() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
getChannel2Name() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
getChannelColorAssignment() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.MergeChannelsAlgorithm
 
getChannelColorAssignment() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.OverlayImagesAlgorithm
Deprecated.
 
getChannelColumnFilter() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
getChannelIndexAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm
 
getChannelIndexAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
getChannelLocation() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
getChannelLocation() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
getChannelLUT(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
getChannelName(int) - Method in interface org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.ColorSpace
Returns the channel name for a given channel index
getChannelName(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.GreyscaleColorSpace
 
getChannelName(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.HSBColorSpace
 
getChannelName(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.IgnoreColorSpace
 
getChannelName(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.LABColorSpace
 
getChannelName(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.RGBColorSpace
 
getChannelName() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerLUTEditor
 
getChannelName() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerOpacityLUTEditor
 
getChannelNameAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm
 
getChannelNameAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
getChannelPosition() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
The overall channel position of the ROIs.
getChannelReordering() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm
 
getChannelSettings() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
getChannelSettings() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
getChannelSettings() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
getChannelSettings() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
getChannelShortName(int) - Method in interface org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.ColorSpace
Returns the channel name for a given channel index
getChannelShortName(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.GreyscaleColorSpace
 
getChannelShortName(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.HSBColorSpace
 
getChannelShortName(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.IgnoreColorSpace
 
getChannelShortName(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.LABColorSpace
 
getChannelShortName(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.RGBColorSpace
 
getChannelSizeAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
getChannelToSlotAssignment() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm
 
getChannelToSlotAssignment() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsAlgorithm
Deprecated.
 
getChart() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.BarBoxAndWhiskerCategoryPlotData
 
getChart() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.BarCategoryPlotData
 
getChart() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.BarStatisticalCategoryPlotData
 
getChart() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
getChart() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.LineCategoryPlotData
 
getChart() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.LineStatisticalCategoryPlotData
 
getChart() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.LineXYPlotData
 
getChart() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.Pie2DPlotData
 
getChart() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.Pie3DPlotData
 
getChart() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
getChart() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.ScatterXYPlotData
 
getChart() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.StackedBarCategoryPlotData
 
getChartPanel() - Method in class org.hkijena.jipipe.ui.components.PlotReader
 
getCheckBox() - Method in class org.hkijena.jipipe.ui.components.ribbon.CheckBoxAction
 
getCheckerboardColor1() - Method in class org.hkijena.jipipe.extensions.imp.nodes.ConvertImpImageToImagePlusAlgorithm
 
getCheckerboardColor2() - Method in class org.hkijena.jipipe.extensions.imp.nodes.ConvertImpImageToImagePlusAlgorithm
 
getCheckerboardSize() - Method in class org.hkijena.jipipe.extensions.imp.nodes.ConvertImpImageToImagePlusAlgorithm
 
getChildParameterCollections() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
 
getChildParameterCollections() - Method in class org.hkijena.jipipe.api.grouping.JsonAlgorithm
 
getChildParameterCollections() - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
getChildParameterCollections() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccessGroupList
 
getChildParameterCollections() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeCustomParameterCollection
Returns all sub-parameter collections
getChildParameterCollections() - Method in class org.hkijena.jipipe.ui.settings.JIPipeProjectInfoParameters
 
getChildren() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
getChildren() - Method in class org.hkijena.jipipe.extensions.scene3d.model.Scene3DGroupNode
 
getCitation() - Method in class org.hkijena.jipipe.api.JIPipeMetadata
 
getCitation() - Method in class org.hkijena.jipipe.extensions.JIPipePrepackagedDefaultJavaPlugin
 
getCitation() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
 
getClass0CountColumnName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
getClass0MeanColumnName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
getClass0SumColumnName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
getClass1CountColumnName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
getClass1MeanColumnName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
getClass1SumColumnName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
getClassAssignment() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingROI2DAlgorithm
 
getClassAssignment() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingROI3DAlgorithm
 
getClassDistance(Class<?>, Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
The number of hierarchy classes between two classes.
getClassifier() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.WekaClassifierParameter
 
getClassifier() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.WekaClassifierSettings
 
getClassifierSettings() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingLabels2DAlgorithm
 
getClassifierSettings() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingLabels2DAlgorithm2
 
getClassifierSettings() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingMask2DAlgorithm
 
getClassifierSettings() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingMask2DAlgorithm2
 
getClassifierSettings() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingROI2DAlgorithm
 
getClassifierSettings() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingROI3DAlgorithm
 
getCleanedMenuPath(String) - Static method in class org.hkijena.jipipe.utils.StringUtils
Cleans a menu path string
getClearedEventEmitter() - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache
 
getClearedEventEmitter() - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache
 
getClijParameters() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNode
 
getCloseMode() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.DocumentTab
 
getCloseMode() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.SingletonTab
 
getClosestSliceZero(ImagePlus, ImageSliceIndex) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Gets the slice closest to the requested slice index (zero-based).
getCode() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ModifyAnnotationScript
 
getCode() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SplitByAnnotationScript
 
getCode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.MacroWrapperAlgorithm
 
getCode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsScriptAlgorithm
 
getCode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge.FilterAndMergeRoiByStatisticsScriptAlgorithm
 
getCode() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameter
 
getCode(Path) - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameter
Gets the code.
getCode() - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingJythonScriptAlgorithm
 
getCode() - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingPythonScriptAlgorithm
 
getCode() - Method in class org.hkijena.jipipe.extensions.python.algorithms.JythonScriptAlgorithm
 
getCode() - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingJythonScriptAlgorithm
 
getCode() - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingPythonScriptAlgorithm
 
getCode() - Method in class org.hkijena.jipipe.extensions.python.algorithms.PythonScriptAlgorithm
 
getCode() - Method in class org.hkijena.jipipe.extensions.python.algorithms.SimpleIteratingJythonScriptAlgorithm
 
getCode() - Method in class org.hkijena.jipipe.extensions.python.PythonUtils.RawPythonCode
 
getCode() - Method in class org.hkijena.jipipe.extensions.tables.nodes.ModifyAndMergeTablesScript
 
getCode() - Method in class org.hkijena.jipipe.extensions.tables.nodes.ModifyTablesScript
 
getCode() - Method in class org.hkijena.jipipe.extensions.tables.nodes.TablesFromScript
 
getCollection() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
getColor() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
getColor() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters
 
getColor() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ArrowAnnotationGraphNode
 
getColor() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesAlgorithm
 
getColor() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentEdge
 
getColor() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
getColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel
Deprecated.
 
getColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SetToColorAlgorithm
 
getColor() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DIndexedMeshGeometry
 
getColor() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry
 
getColor() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
getColor() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DUnindexedMeshGeometry
 
getColor() - Method in interface org.hkijena.jipipe.extensions.scene3d.model.Scene3DGeometry
Gets the color of this geometry
getColor() - Method in class org.hkijena.jipipe.ui.components.ColorChooserButton.ColorChosenEvent
 
getColor() - Method in class org.hkijena.jipipe.ui.components.icons.MonochromeColorIcon
 
getColor() - Method in class org.hkijena.jipipe.utils.ColorUtils.GradientStop
 
getColorChosenEventEmitter() - Method in class org.hkijena.jipipe.ui.components.ColorChooserButton
 
getColorForGap(int, int, int) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
getColorInvalid() - Static method in class org.hkijena.jipipe.extensions.forms.ui.DataBatchStatusTableCellRenderer
 
getColorInvalidSelected() - Static method in class org.hkijena.jipipe.extensions.forms.ui.DataBatchStatusTableCellRenderer
 
getColorMap() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap
 
getColorMap() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelColorMapIcon
 
getColorMap() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToRGBAlgorithm
 
getColorMap() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorMapAlgorithm
 
getColorMap() - Method in class org.hkijena.jipipe.extensions.parameters.library.colors.ColorMapIcon
 
getColorMap() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
getColorMap() - Method in class org.hkijena.jipipe.extensions.plots.utils.ColorMapIcon
 
getColorMode() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
getColorMode() - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
getColorModelString(BufferedImage) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils
 
getColors() - Method in enum org.hkijena.jipipe.extensions.plots.utils.ColorMap
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorHSBData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorLABData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorRGBData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorHSBData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorLABData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorRGBData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorHSBData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorLABData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorRGBData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorHSBData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorLABData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorRGBData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorHSBData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorLABData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorRGBData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleData
 
getColorSpace() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
getColorSpaceAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
getColorSpaceOf(Class<? extends ImagePlusData>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
getColorUnvisited() - Static method in class org.hkijena.jipipe.extensions.forms.ui.DataBatchStatusTableCellRenderer
 
getColorVisited() - Static method in class org.hkijena.jipipe.extensions.forms.ui.DataBatchStatusTableCellRenderer
 
getColumn() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotationTableToPaths
 
getColumn(int) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
Returns the column definition of given index
getColumn() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.Index
 
getColumnAsDouble(String) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotDataSeries
Gets a copy of a column by name
getColumnAssignment() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableToImageAlgorithm
 
getColumnAssignments() - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesBuilder
 
getColumnAsString(String) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotDataSeries
Gets a copy of a column by name
getColumnC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm
 
getColumnC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
getColumnClass(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
The column class.
getColumnClass(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
getColumnClass(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableMetadata
 
getColumnClass(int) - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
 
getColumnClass(int) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
 
getColumnClass(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
getColumnClass(int) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantTableModel
 
getColumnClass(int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableModel
 
getColumnClass(int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
getColumnClass(int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableModel
 
getColumnClass(int) - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerTableModel
 
getColumnClass(int) - Method in class org.hkijena.jipipe.ui.ijupdater.FileTableModel
 
getColumnCopy(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Returns a column as vector.
getColumnCount() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
getColumnCount() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
getColumnCount() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableMetadata
 
getColumnCount() - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
 
getColumnCount() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
 
getColumnCount() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
getColumnCount() - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantTableModel
 
getColumnCount() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableModel
 
getColumnCount() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
getColumnCount() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableModel
 
getColumnCount() - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerTableModel
 
getColumnCount() - Method in class org.hkijena.jipipe.ui.ijupdater.FileTableModel
 
getColumnCountAnnotation() - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm
 
getColumnFilter() - Method in class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSimpleAlgorithm
 
getColumnFilter() - Method in class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm
 
getColumnFilter() - Method in class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableIntoColumnsAlgorithm
 
getColumnHeight() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
getColumnIdentifiers(DefaultTableModel) - Static method in class org.hkijena.jipipe.utils.TableUtils
Gets the table's column names
getColumnIndex(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
 
getColumnIndex(String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Returns the index of an existing column
getColumnInfo(int) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
 
getColumnMatching() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
getColumnMatching() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
getColumnMatching() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
getColumnName(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
getColumnName(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
getColumnName(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableMetadata
 
getColumnName() - Method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurementColumn
 
getColumnName() - Method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurementColumn
 
getColumnName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm.Entry
 
getColumnName() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementColumn
 
getColumnName() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.MeasurementColumn
 
getColumnName(int) - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
 
getColumnName(int) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
 
getColumnName() - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.ExtractJsonDataAsTableAlgorithm.Entry
 
getColumnName() - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.TextDataToTableAlgorithm.Entry
 
getColumnName() - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm.Entry
 
getColumnName(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
getColumnName() - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2.Entry
 
getColumnName(int) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantTableModel
 
getColumnName(int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableModel
 
getColumnName(int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
getColumnName(int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableModel
 
getColumnName(int) - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerTableModel
 
getColumnName(int) - Method in class org.hkijena.jipipe.ui.ijupdater.FileTableModel
 
getColumnNames() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
getColumnNamesAnnotation() - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm
 
getColumnNormalization() - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.ExtractJsonDataAsTableAlgorithm
 
getColumnNormalization() - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.TextDataToTableAlgorithm
 
getColumnNormalization() - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm
 
getColumnNormalization() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.UnMeltTableAlgorithm
 
getColumnOperation() - Method in class org.hkijena.jipipe.extensions.expressions.functions.ColumnOperationAdapterFunction
 
getColumnOperationById(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry
Returns an operation by ID
getColumnRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm
 
getColumnReference(String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Returns a column as vector.
getColumnReference(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Returns a column as vector.
getColumns() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm
 
getColumns() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
getColumns() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.MontageToStackAlgorithm
 
getColumns() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
getColumns() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersFromTableAlgorithm
 
getColumns() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm
 
getColumns() - Method in class org.hkijena.jipipe.extensions.tables.nodes.GenerateColumnAlgorithm
 
getColumns() - Method in class org.hkijena.jipipe.extensions.tables.nodes.GenerateTableFromExpressionAlgorithm
 
getColumns() - Method in class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableByColumnsAlgorithm
 
getColumnT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm
 
getColumnT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
getColumnWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
getColumnX1() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm
 
getColumnX1() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
getColumnX2() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
getColumnY1() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm
 
getColumnY1() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
getColumnY2() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
getColumnZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm
 
getColumnZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
getCombinationFunction() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SimplifyAnnotationsAlgorithm
 
getComboBox() - Method in class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox
 
getCompartment() - Method in class org.hkijena.jipipe.api.JIPipeProject.CompartmentAddedEvent
 
getCompartment() - Method in class org.hkijena.jipipe.api.JIPipeProject.CompartmentRemovedEvent
 
getCompartment() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
getCompartment() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.properties.JIPipeSingleCompartmentSelectionPanelUI
 
getCompartment() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getCompartment() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
getCompartmentAddedEventEmitter() - Method in class org.hkijena.jipipe.api.JIPipeProject
 
getCompartmentDisplayName() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns a display name for the compartment
getCompartmentDisplayNameOf(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns a human-readable name of the compartment.
getCompartmentGraph() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal.Snapshot
 
getCompartmentGraph() - Method in class org.hkijena.jipipe.api.JIPipeProject
 
getCompartmentId() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm
 
getCompartmentName() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImagePlusResultImportRun
 
getCompartmentName() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.OMEImageResultImportRun
 
getCompartmentRemovedEventEmitter() - Method in class org.hkijena.jipipe.api.JIPipeProject
 
getCompartments() - Method in class org.hkijena.jipipe.api.JIPipeProject
 
getCompartmentUUID() - Method in class org.hkijena.jipipe.api.JIPipeProject.CompartmentRemovedEvent
 
getCompartmentUUIDInGraphAsString() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the compartment UUID in the graph as string.
getCompartmentUUIDInParentGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the compartment UUID within the current graph.
getCompartmentUUIDOf(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Gets the UUID of the compartment
getComponentDimension() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm
 
getComponentDimension() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
 
getComponentIdAnnotation() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.split.SplitFilamentsIntoConnectedComponentsAlgorithm
 
getComponentNameAnnotation() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
getComponentNameAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
getComponents() - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Action
 
getCompositeBlendLayers() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
getCompression() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEExporterSettings
 
getCompression() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMETIFFCompression
 
getCompression() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Video2DExporterRun
 
getCondaDownloadURL() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller.Configuration
 
getCondaExecutable() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectCondaEnvPythonInstaller.Configuration
 
getCondaExecutableInInstallationPath() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
Returns the path to the conda executable within the configured installation directory
getCondition() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConditionalInverterAlgorithm
 
getConfig() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator
 
getConfiguration() - Method in class org.hkijena.jipipe.api.data.JIPipeSlotConfiguration.SlotConfigurationChangedEvent
 
getConfiguration() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun
 
getConfiguration() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
 
getConfiguration() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller
 
getConfiguration() - Method in class org.hkijena.jipipe.extensions.r.installers.REnvInstaller
 
getConflictWarnings() - Method in class org.hkijena.jipipe.ui.ijupdater.RefreshRepositoryRun
 
getConnectHighlight() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getConnection(JIPipeDataSlot, JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
getConnectivity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling2DAlgorithm
 
getConnectivity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling3DAlgorithm
 
getConnectivity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm
 
getConnectivity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMaxima2DAlgorithm
 
getConnectivity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMaxima3DAlgorithm
 
getConnectivity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMinima2DAlgorithm
 
getConnectivity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMinima3DAlgorithm
 
getConnectivity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMaxima2DAlgorithm
 
getConnectivity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMaxima3DAlgorithm
 
getConnectivity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMinima2DAlgorithm
 
getConnectivity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMinima3DAlgorithm
 
getConnectivity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm
 
getConnectivity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm
 
getConnectivity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologicalReconstruction2DAlgorithm
 
getConnectivity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologicalReconstruction3DAlgorithm
 
getConnectivity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm
 
getConnectivity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm
 
getConnectivityInspector() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
getConsensusBitDepth(Collection<ImagePlus>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Returns the lowest ImageJ image type that can contain all images.
getConsensusPhysicalSizeUnit() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
Finds the common unit within the whole vertex set.
getConsensusPhysicalSizeUnit() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
Finds the common unit within the vertex.
getConstant() - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionConstantEntry
 
getConstant() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm.OutputType
 
getContact() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
getContent() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup
 
getContent() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameter
 
getContent() - Method in class org.hkijena.jipipe.JIPipeService.ExtensionContentAddedEvent
 
getContent() - Method in class org.hkijena.jipipe.JIPipeService.ExtensionContentRemovedEvent
 
getContent() - Method in class org.hkijena.jipipe.ui.components.FormPanel.FormPanelEntry
 
getContent() - Method in class org.hkijena.jipipe.ui.components.markdown.MarkdownReader
 
getContent() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.DocumentTab
 
getContentClass() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameter
 
getContentClass() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameter
 
getContentOrDefault(OMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.extensions.omero.OptionalOMEROCredentialsEnvironment
 
getContentOrDefault(T) - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameter
Returns the content if enabled, otherwise the default value
getContentPane() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
 
getContentPanel() - Method in class org.hkijena.jipipe.ui.components.FlexContentPanel
 
getContentPanel() - Method in class org.hkijena.jipipe.ui.components.FormPanel
 
getContents() - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
getContents() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D.ImageLoaderRun
 
getContentStyle() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode
 
getContentSupplier() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.SingletonTab
 
getContentX() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
getContentY() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
getContext() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry
 
getContext() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
getContext() - Method in class org.hkijena.jipipe.JIPipeGUICommand
 
getContext() - Method in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmWindow
 
getContext() - Method in class org.hkijena.jipipe.ui.components.SplashScreen
 
getContext() - Method in class org.hkijena.jipipe.ui.ijupdater.MissingRegistrationUpdateSiteResolver
 
getContext() - Method in class org.hkijena.jipipe.ui.JIPipeDummyWorkbench
 
getContext() - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
 
getContext() - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWorkbench
 
getContext() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
 
getContext() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
getContext() - Method in interface org.hkijena.jipipe.ui.JIPipeWorkbench
 
getContext() - Method in class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
 
getContext() - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
getContextActions() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection
List of context actions that are added to this collection.
getContextActions() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getContextObject(Class<T>) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
getContinueOnFailure() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
getContinueOnFailure() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
getContinueOnFailureExportFailedInputs() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
getContinueOnFailureExportFailedInputs() - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
getContinueOnFailureExportFailedInputs() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
getContinueOnFailureSettings() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
getContrastEnhancer() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
getContrastEnhancerSettings() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJSettings
 
getContrastHigh() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
getContrastLow() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
getContrastThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm
 
getControlSize() - Method in class org.hkijena.jipipe.utils.ui.CheckBoxIcon
 
getControlSize() - Method in class org.hkijena.jipipe.utils.ui.CheckBoxMenuItemIcon
 
getControlTextColor() - Method in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
Returns the control text color.
getControlTextColor() - Method in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
Returns the control text color.
getConversionDistance(Class<? extends JIPipeData>, Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Returns the number of conversion steps.
getConverter() - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry.DataConverterEdge
The converter if the data types cannot be trivially converted
getCornerSize() - Method in class org.hkijena.jipipe.ui.components.renderers.DropShadowRenderer
 
getCornerSize() - Method in class org.hkijena.jipipe.utils.ui.RoundedLineBorder
 
getCorrespondingOutputSlot(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm
Gets the output slot that correspond to the input slot.
getCorrespondingOutputSlot(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm
Gets the output slot that correspond to the input slot.
getCostesRandomizations() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
getCountAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
getCountColumnName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator
 
getCounterAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.CreateStackAlgorithm
 
getCountingColumn() - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm
 
getCounts() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.distribute.DistributeDataRandomlyByCountAlgorithm
 
getCreatedDimension() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackToDimensionMerger2Algorithm
 
getCreatedDimension() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackToDimensionMergerAlgorithm
 
getCreationTime() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal.Snapshot
 
getCreationTime() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournalSnapshot
 
getCreationTime() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal.Snapshot
 
getCreationTime() - Method in class org.hkijena.jipipe.ui.history.CurrentStateSnapshot
 
getCredentials() - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROGateway
 
getCriteriaMethod() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
getCropRegions() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
getCropRegions() - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
getCudaToolkitVersion() - Method in class org.hkijena.jipipe.extensions.cellpose.installers.MinicondaCellposeGPUEnvInstaller.Configuration
 
getCurrentActiveArea() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
getCurrentBackupPath() - Method in class org.hkijena.jipipe.extensions.settings.BackupSettings
 
getCurrentCache() - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantUI
 
getCurrentColor() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
getCurrentColorMap() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
getCurrentConnectionDragSource() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getCurrentConnectionDragTarget() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getCurrentContent() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
 
getCurrentExpressionValue() - Method in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderParameterUI
 
getCurrentImage() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin
 
getCurrentImageContents() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
getCurrentImageContentsResamplingFactor() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
getCurrentImagePlus() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin
 
getCurrentImageStats() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
getCurrentIterationStepIndex() - Method in interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationContext
Index of the currently handled iteration step
getCurrentIterationStepIndex() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMutableIterationContext
 
getCurrentlySelectedSingletonTabId() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Returns the currently selected singleton tab ID.
getCurrentlySelectedValue() - Method in class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExtensionContentListUI
 
getCurrentMaskSlice() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
getCurrentMax() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl
 
getCurrentMax() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl
 
getCurrentMin() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl
 
getCurrentMin() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl
 
getCurrentMode() - Method in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderParameterUI
 
getCurrentPlot() - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
 
getCurrentRewireDragSource() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
getCurrentRewireDragTarget() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
getCurrentRun() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
 
getCurrentRunWorker() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
 
getCurrentSlice() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
getCurrentSlice() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin2D
 
getCurrentSliceIndex() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
Returns the currently viewed slice position
getCurrentSlicePosition() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin2D
 
getCurrentSliceStats() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
getCurrentSnapshot() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal
 
getCurrentSnapshot() - Method in class org.hkijena.jipipe.api.history.JIPipeDummyGraphHistoryJournal
 
getCurrentSnapshot() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Gets the snapshot that represents the current state of the data
getCurrentSnapshot() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal
 
getCurrentTool() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
getCurrentTool() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getCurrentTool() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
getCursor() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
getCursor() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool
 
getCursor() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
getCursor() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
getCustomAnnotationMatching() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
getCustomAnnotationMatching() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
getCustomAnnotationMatching() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
getCustomAnnotationMatching() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
getCustomBackupPath() - Method in class org.hkijena.jipipe.extensions.settings.BackupSettings
 
getCustomColorMap() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
getCustomColumns() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
getCustomColumns() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
getCustomColumns() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
getCustomColumns() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings
 
getCustomDataLoader() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedImagePlusDataViewerWindow
 
getCustomDescription() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference
 
getCustomDescription() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the custom description that is set by the user
getCustomHeight() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableToImageAlgorithm
 
getCustomHMax() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm
 
getCustomHMin() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm
 
getCustomIcon() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
getCustomInstallerPath() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller.Configuration
 
getCustomInstallerPath() - Method in class org.hkijena.jipipe.extensions.r.installers.REnvInstaller.Configuration
 
getCustomInstanceGenerator() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameter
 
getCustomInteractiveViewPlatformTransformer() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomImage3DUniverse
 
getCustomIsParameterCollectionVisible() - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
getCustomIsParameterVisible() - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
getCustomMax() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJSettings.ContrastEnhancerSettings
 
getCustomMax() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm
 
getCustomMax() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.CalibrationParameters
 
getCustomMax() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl
 
getCustomMax() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl
 
getCustomMenuRegistry() - Method in class org.hkijena.jipipe.JIPipe
 
getCustomMenuRegistry() - Method in interface org.hkijena.jipipe.JIPipeService
 
getCustomMenus() - Static method in class org.hkijena.jipipe.JIPipe
 
getCustomMin() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJSettings.ContrastEnhancerSettings
 
getCustomMin() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm
 
getCustomMin() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.CalibrationParameters
 
getCustomMin() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl
 
getCustomMin() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl
 
getCustomName() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
getCustomName() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference
 
getCustomName() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
The current custom (user-defined) name
getCustomSizeC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableToImageAlgorithm
 
getCustomSizeT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableToImageAlgorithm
 
getCustomSizeZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableToImageAlgorithm
 
getCustomText() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
getCustomThreshold() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.NucleiSegmentation3DAlgorithm
 
getCustomWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableToImageAlgorithm
 
getDarkBorderColor() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory
 
getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory
 
getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory
 
getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory
 
getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory
 
getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory
 
getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory
 
getDarkBorderColor() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory
 
getDarkBorderColor() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory
The border color for algorithm nodes (dark theme)
getDarkBorderColor() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsNodeTypeCategory
 
getDarkFillColor() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory
 
getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory
 
getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory
 
getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory
 
getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory
 
getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory
 
getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory
 
getDarkFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory
 
getDarkFillColor() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory
The fill color for algorithm nodes (dark theme)
getDarkFillColor() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsNodeTypeCategory
 
getDarkIcons128BasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
 
getDarkIcons16BasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
 
getDarkIcons32BasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
 
getDarkIcons64BasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
 
getDarkIconURL() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
getData(Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataAnnotation
 
getData() - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.StoredEvent
 
getData(Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore
Gets the currently stored data.
getData(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore
Gets the currently stored data
getData(int, Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets the data stored in a specific row.
getData() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
getData() - Method in class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeModelData
 
getData() - Method in class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeSizeModelData
 
getData() - Method in class org.hkijena.jipipe.extensions.ilastik.datatypes.IlastikModelData
 
getData() - Method in class org.hkijena.jipipe.extensions.strings.StringData
 
getData() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.DoubleArrayTableColumn
 
getData() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.FloatArrayTableColumn
 
getData() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.StringArrayTableColumn
 
getData() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCachedDataPreview
Returns the stored data or null if it was already cleared
getData() - Method in class org.hkijena.jipipe.utils.search.RankedData
 
getData_(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore
Gets the currently stored data
getDataAnnotation(int, String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets a data annotation
getDataAnnotation(int, int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets a data annotation
getDataAnnotation() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeDataTableDataSource
Optional: Data annotation
getDataAnnotation() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeWeakDataTableDataSource
Optional: Data annotation
getDataAnnotation() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotPreview
The data annotation (optional)
getDataAnnotationColumnArray_(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets the annotation data column DOES NOT ENSURE that the output size is equal to getRowCount() NOT THREAD-SAFE, REQUIRES A READ LOCK!
getDataAnnotationColumnNames() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
getDataAnnotationColumns() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
getDataAnnotationColumns() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableMetadata
 
getDataAnnotationColumns() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
getDataAnnotationFilter() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PullDataTableAnnotations
 
getDataAnnotationFilter() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PushDataTableAnnotations
 
getDataAnnotationItemStore(int, String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets a data annotation as JIPipeDataItemStore
getDataAnnotationItemStoreMap_(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Returns a map of all data annotations as JIPipeDataItemStore NOT THREAD-SAFE.
getDataAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithData
 
getDataAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableArchive
 
getDataAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableDirectory
 
getDataAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PullDataTableAnnotations
 
getDataAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PushDataTableAnnotations
 
getDataAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.ImportJIPipeSlotFolderAlgorithm
 
getDataAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
getDataAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
getDataAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
getDataAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings
 
getDataAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithmIterationStepGenerationSettings
 
getDataAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
getDataAnnotations(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets the list of all data annotations in the specified row
getDataAnnotations(Collection<Integer>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets the list of all data annotations in the specified row
getDataAnnotations() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadataRow
 
getDataAnnotationsButton() - Method in class org.hkijena.jipipe.ui.cache.JIPipeDataTableRowUI
 
getDataAnnotationStores() - Method in class org.hkijena.jipipe.ui.cache.JIPipeDataTableRowUI
 
getDataAsDouble(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.DoubleArrayTableColumn
 
getDataAsDouble(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.FloatArrayTableColumn
 
getDataAsDouble(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RelabeledTableColumn
 
getDataAsDouble(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RowIndexTableColumn
 
getDataAsDouble(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.StringArrayTableColumn
 
getDataAsDouble(int) - Method in interface org.hkijena.jipipe.extensions.tables.datatypes.TableColumn
Returns as many data entries as rows
getDataAsDouble(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ZeroTableColumn
 
getDataAsDouble(int) - Method in class org.hkijena.jipipe.extensions.tables.TableColumnReference
 
getDataAsObjectList() - Method in interface org.hkijena.jipipe.extensions.tables.datatypes.TableColumn
Returns the data as list of objects The objects are strings or numbers depending on the column type
getDataAsString(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.DoubleArrayTableColumn
 
getDataAsString(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.FloatArrayTableColumn
 
getDataAsString(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RelabeledTableColumn
 
getDataAsString(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RowIndexTableColumn
 
getDataAsString(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.StringArrayTableColumn
 
getDataAsString(int) - Method in interface org.hkijena.jipipe.extensions.tables.datatypes.TableColumn
Returns as many data entries as rows
getDataAsString(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ZeroTableColumn
 
getDataAsString(int) - Method in class org.hkijena.jipipe.extensions.tables.TableColumnReference
 
getDatabase() - Method in class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox
 
getDataBatchAssistantUI() - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantBatchPanel
 
getDataBatchAssistantUI() - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantInputPreviewPanel
 
getDataBatches() - Method in class org.hkijena.jipipe.api.JIPipeDataBatchGenerationResult
 
getDataBatchForms() - Method in class org.hkijena.jipipe.extensions.forms.ui.FormsDialog
 
getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm
 
getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm
 
getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm
 
getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm
 
getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm
 
getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm
 
getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm
 
getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.IteratingFormProcessorAlgorithm
 
getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.MergingFormProcessorAlgorithm
 
getDataBatchGenerationSettings() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.SimpleIteratingFormProcessorAlgorithm
 
getDataBatchList() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableUI
 
getDataClass() - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataAnnotation
 
getDataClass() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
 
getDataClass() - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore
 
getDataClass() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
getDataClass(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets the true type of the data at given row
getDataClass() - Method in class org.hkijena.jipipe.extensions.parameters.api.graph.SlotMapParameterCollection
 
getDataContainer() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.CustomColoc2.ColocResult
 
getDataContext(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets the context of the data in the row
getDataContext() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadataRow
 
getDataContexts() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
getDataConverterFunction() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
 
getDataInfo(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Returns Information about the true data type that is stored at given row
getDataInfo() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.DataTypeDeselectedEvent
 
getDataInfo() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.DataTypeSelectedEvent
 
getDataInputSlotCount() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm
Returns the number of input slots that are not parameter slots.
getDataInputSlots() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm
 
getDataInputSlots() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Method that can be overwritten by child classes.
getDataInputSlots() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.IteratingFormProcessorAlgorithm
 
getDataInputSlots() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.MergingFormProcessorAlgorithm
 
getDataInputSlots() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.SimpleIteratingFormProcessorAlgorithm
 
getDataItemStore() - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataAnnotation
 
getDataItemStore(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets the virtual data container at given row
getDataManagerFacility() - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROGateway
 
getDataReference() - Method in class org.hkijena.jipipe.api.data.utils.JIPipeWeakDataReferenceData
 
getDataset() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.ImageJ2DatasetData
Gets the data set
getDataset(long, long) - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROGateway
Gets a dataset
getDataset() - Method in class org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm
 
getDatasetId() - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMERODatasetReferenceData
 
getDatasetIds() - Method in class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMERODatasetReferenceDataSource
 
getDataSetMatching() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings
 
getDataSource() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
getDataSource() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin
Gets the current data source if any is set
getDataSource() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
 
getDataSourceMenuLocation() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
getDataSourceMenuLocation() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
If the node is of category DataSourceNodeTypeCategory, allows to re-assign them to a new menu If JIPipeEmptyData is returned, no re-assignment is applied
getDataStoreReference() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGenerationRun
 
getDataTable() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeDataTableDataSource
The data slot where the data is sourced
getDataTable() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeWeakDataTableDataSource
The data slot where the data is sourced
getDataTable() - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantDataTableUI
 
getDataTable() - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantTableModel
 
getDataTable() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToZIPExporterRun
 
getDataTable() - Method in class org.hkijena.jipipe.ui.cache.JIPipeDataTableRowUI
 
getDataTable() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableModel
 
getDataTable() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableUI
 
getDataTable() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableUI
 
getDataTable() - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerDataTableUI
 
getDataTable() - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerTableModel
 
getDataTables() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToFilesByMetadataExporterRun
 
getDataTables() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToOutputExporterRun
 
getDataTableTooltip(JIPipeDataTable) - Static method in class org.hkijena.jipipe.utils.TooltipUtils
Creates a tooltip for an JIPipeDataSlot
getDataTooltip(JIPipeDataInfo) - Static method in class org.hkijena.jipipe.utils.TooltipUtils
Creates a tooltip for data
getDataType() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataRowFolder
 
getDataType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateZeroImage
 
getDataTypeDeselectedEventEmitter() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker
 
getDataTypeId() - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter
 
getDataTypeId() - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter
 
getDatatypeList() - Method in class org.hkijena.jipipe.ui.components.AddAlgorithmSlotPanel
 
getDataTypeOf(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
Returns the true data type (if available) or the accepted data type of the given row
getDataTypePicker() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.DataTypeDeselectedEvent
 
getDataTypePicker() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.DataTypeSelectedEvent
 
getDataTypePicker() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.SelectedDataTypesChangedEvent
 
getDatatypeRegisteredEventEmitter() - Method in class org.hkijena.jipipe.JIPipe
 
getDatatypeRegisteredEventEmitter() - Method in interface org.hkijena.jipipe.JIPipeService
 
getDatatypeRegistry() - Method in class org.hkijena.jipipe.JIPipe
 
getDatatypeRegistry() - Method in interface org.hkijena.jipipe.JIPipeService
 
getDataTypes() - Static method in class org.hkijena.jipipe.JIPipe
 
getDataTypesByMenuPaths() - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Gets the registered data types, grouped by their menu paths
getDataTypeSelectedEventEmitter() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker
 
GetDateDayFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.datetime
 
GetDateDayFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.datetime.GetDateDayFunction
 
GetDateMonthFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.datetime
 
GetDateMonthFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.datetime.GetDateMonthFunction
 
getDateTime() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
getDateTime() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogEntry
 
GetDateYearFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.datetime
 
GetDateYearFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.datetime.GetDateYearFunction
 
getDeactivatedAlgorithms() - Method in class org.hkijena.jipipe.api.JIPipeProject
Returns a list of all nodes that cannot be executed or are deactivated by the user.
getDeactivatedNodes(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Gets all algorithms and all dependent algorithms that are missing inputs or are deactivated by the user
getDeactivatedNodes(Set<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Gets all algorithms and all dependent algorithms that are missing inputs or are deactivated by the user
getDecimals() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.RoundFloatImageAlgorithm
 
getDeclaredBy(JIPipeDependency) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Returns all data infos added by the dependency
getDeclaredBy(JIPipeDependency) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Gets all algorithms declared by the dependency
getDeclaredFieldValue(String, Object) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
Gets the value of a field
getDeclaredFieldValue(String, Object, Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
Gets the value of a field
getDeclaredStaticFieldValue(String, Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
Gets the value of a field
getDefaultAlgorithmUIActionRequestedEventEmitter() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getDefaultAnimationFPS() - Method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer2DUISettings
 
getDefaultAnimationFPS() - Method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer3DUISettings
 
getDefaultCredentials() - Method in class org.hkijena.jipipe.extensions.omero.OMEROSettings
 
getDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
 
getDefaultEdgeVisibility() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
getDefaultExporterFor(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry
Gets the default exporter for a data class
getDefaultImporterFor(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry
Gets the default importer for a data class
getDefaultParameterCollectionDescription() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccessGroup
 
getDefaultParameterCollectionDescription() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeNamedParameterCollection
A default description.
getDefaultParameterCollectionName() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccessGroup
 
getDefaultParameterCollectionName() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeNamedParameterCollection
A default name.
getDefaultQuickRunThreads() - Method in class org.hkijena.jipipe.extensions.settings.RuntimeSettings
 
getDefaultRunThreads() - Method in class org.hkijena.jipipe.extensions.settings.RuntimeSettings
 
getDefaultRuntimePartition() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration
 
getDefaultSortOrder() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByAnnotationsAlgorithm
 
getDefaultTemplateProject() - Static method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
Creates a new project instance based on the current template selection
getDefaultValues() - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm
 
getDeletedLabel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByThicknessAlgorithm
 
getDependencies() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
getDependencies() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
getDependencies() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo
 
getDependencies() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo
 
getDependencies() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Gets all dependencies of all algorithms
getDependencies() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns a list of all dependencies this algorithm currently has.
getDependencies() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
Returns all dependencies
getDependencies() - Method in class org.hkijena.jipipe.extensions.cellpose.CellposePlugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJPlugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.core.CorePlugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.forms.FormsPlugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.ij3d.IJ3DPlugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsPlugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingPlugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.TrackMatePlugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.ijweka.WekaPlugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.ilastik.IlastikPlugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2Plugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.ImageJAlgorithmsPlugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesPlugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.omero.OMEROPlugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.omnipose.OmniposePlugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2AlgorithmInfo
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.plots.PlotsPlugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.r.RPlugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.scene3d.Scene3DPlugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.tables.TablesPlugin
 
getDependencies() - Method in class org.hkijena.jipipe.extensions.utils.UtilitiesPlugin
 
getDependencies() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
 
getDependencies() - Method in interface org.hkijena.jipipe.JIPipeDependency
List of JIPipe dependencies.
getDependencies() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
 
getDependencies() - Method in class org.hkijena.jipipe.JIPipeMutableDependency
 
getDependencyAlgorithmIds() - Method in class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask
 
getDependencyCitations() - Method in class org.hkijena.jipipe.api.compartments.JIPipeCompartmentsPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.api.grouping.GroupingPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.api.JIPipeMetadata
 
getDependencyCitations() - Method in class org.hkijena.jipipe.api.looping.LoopingPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.annotation.AnnotationsPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.batchassistant.BatchAssistantPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.cellpose.CellposePlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.core.CorePlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.dev.DevelopmentPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.filesystem.FilesystemPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.forms.FormsPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.graphannotation.GraphAnnotationPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.ij3d.IJ3DPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.TrackMatePlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.ijweka.WekaPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.ilastik.IlastikPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2Plugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.ImageJAlgorithmsPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.imp.ImpPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionLoaderPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.multiparameters.MultiParameterAlgorithmsPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.multiparameters.MultiParametersPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplateBoxToolPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.omero.OMEROPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.omnipose.OmniposePlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.parameters.StandardParametersPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.pipelinerender.PipelineRenderPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.plots.PlotsPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.processes.ProcessesPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.python.PythonPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.r.RPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.scene3d.Scene3DPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.settings.StandardSettingsPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.strings.StringsPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.tables.TablesPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.tools.ToolsPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.extensions.utils.UtilitiesPlugin
 
getDependencyCitations() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Returns all dependent work
getDependencyDatatypeClasses() - Method in class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask
 
getDependencyDatatypeIds() - Method in class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask
 
getDependencyGraph() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
Returns a directed graph of all dependencies.
getDependencyId() - Method in class org.hkijena.jipipe.api.compartments.JIPipeCompartmentsPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.api.grouping.GroupingPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.api.looping.LoopingPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.annotation.AnnotationsPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.batchassistant.BatchAssistantPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.cellpose.CellposePlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.core.CorePlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.dev.DevelopmentPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.filesystem.FilesystemPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.forms.FormsPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.graphannotation.GraphAnnotationPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.ij3d.IJ3DPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.TrackMatePlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.ijweka.WekaPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.ilastik.IlastikPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2Plugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.ImageJAlgorithmsPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.imp.ImpPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionLoaderPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.multiparameters.MultiParameterAlgorithmsPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.multiparameters.MultiParametersPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplateBoxToolPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.omero.OMEROPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.omnipose.OmniposePlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.parameters.StandardParametersPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.pipelinerender.PipelineRenderPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.plots.PlotsPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.processes.ProcessesPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.python.PythonPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.r.RPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.scene3d.Scene3DPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.settings.StandardSettingsPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.strings.StringsPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.tables.TablesPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.tools.ToolsPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.extensions.utils.UtilitiesPlugin
 
getDependencyId() - Method in interface org.hkijena.jipipe.JIPipeDependency
 
getDependencyId() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
 
getDependencyId() - Method in class org.hkijena.jipipe.JIPipeMutableDependency
 
getDependencyId() - Method in class org.hkijena.jipipe.ui.extensions.UpdateSitePlugin
 
getDependencyLocation() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
 
getDependencyLocation() - Method in interface org.hkijena.jipipe.JIPipeDependency
Gets the location of the JAR/JSON that defined the dependency
getDependencyLocation() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
 
getDependencyLocation() - Method in class org.hkijena.jipipe.JIPipeMutableDependency
 
getDependencyLocation() - Method in class org.hkijena.jipipe.ui.extensions.UpdateSitePlugin
 
getDependencySitesToInstall() - Method in class org.hkijena.jipipe.ui.extensions.ActivateDependenciesConfirmationDialog
 
getDependencyVersion() - Method in class org.hkijena.jipipe.extensions.JIPipePrepackagedDefaultJavaPlugin
 
getDependencyVersion() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
 
getDependencyVersion() - Method in interface org.hkijena.jipipe.JIPipeDependency
 
getDependencyVersion() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
 
getDependencyVersion() - Method in class org.hkijena.jipipe.JIPipeMutableDependency
 
getDependencyVersion() - Method in class org.hkijena.jipipe.ui.extensions.UpdateSitePlugin
 
getDepth() - Method in class org.hkijena.jipipe.ui.grapheditor.general.layout.MSTGraphAutoLayoutMethod.Edge
 
getDepth() - Method in class org.hkijena.jipipe.ui.grapheditor.general.layout.MSTGraphAutoLayoutMethod.Node
 
getDescription() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory
 
getDescription() - Method in class org.hkijena.jipipe.api.compartments.JIPipeCompartmentsPlugin
 
getDescription() - Method in interface org.hkijena.jipipe.api.compat.ImageJDataExporter
A documentation description.
getDescription() - Method in interface org.hkijena.jipipe.api.compat.ImageJDataImporter
A documentation description.
getDescription() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation
 
getDescription() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
 
getDescription() - Method in interface org.hkijena.jipipe.api.data.JIPipeDataOperation
 
getDescription() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
 
getDescription() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
getDescription() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
getDescription() - Method in class org.hkijena.jipipe.api.grouping.GroupingPlugin
 
getDescription() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
getDescription(JIPipeParameterTree) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference
Gets the name or custom name.
getDescription() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess
 
getDescription() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup
 
getDescription() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal.Snapshot
 
getDescription() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournalSnapshot
 
getDescription() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal.Snapshot
 
getDescription() - Method in class org.hkijena.jipipe.api.JIPipeMetadata
 
getDescription() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
getDescription() - Method in class org.hkijena.jipipe.api.looping.LoopingPlugin
 
getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory
 
getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory
 
getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory
 
getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory
 
getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory
 
getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory
 
getDescription() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory
 
getDescription() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
getDescription() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
getDescription() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
getDescription() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
getDescription() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry
 
getDescription() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo
 
getDescription() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
getDescription() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
Returns the algorithm description
getDescription() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory
A description
getDescription() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
getDescription() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterTypeInfo
 
getDescription() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
 
getDescription() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess
 
getDescription() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
getDescription() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Returns a description
getDescription() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterGenerator
 
getDescription() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
getDescription() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterTypeInfo
 
getDescription() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
getDescription() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ColumnOperationEntry
 
getDescription() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ExpressionFunctionEntry
 
getDescription() - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry.InstallerEntry
 
getDescription() - Method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry.Sheet
 
getDescription() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
getDescription() - Method in class org.hkijena.jipipe.extensions.annotation.AnnotationsPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.batchassistant.BatchAssistantPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.cellpose.CellposePlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.core.CorePlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.core.data.CopyContainingFolderDataImportOperation
 
getDescription() - Method in class org.hkijena.jipipe.extensions.core.data.DefaultDataDisplayOperation
 
getDescription() - Method in class org.hkijena.jipipe.extensions.core.data.OpenContainingFolderDataImportOperation
 
getDescription() - Method in class org.hkijena.jipipe.extensions.core.data.OpenInNativeApplicationDataImportOperation
 
getDescription() - Method in class org.hkijena.jipipe.extensions.core.data.OpenTextInJIPipeDataOperation
 
getDescription() - Method in class org.hkijena.jipipe.extensions.dev.DevelopmentPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionConstantEntry
 
getDescription() - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionOperatorEntry
 
getDescription() - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionParameterVariableInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.expressions.ParameterInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.filesystem.FilesystemPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.filesystem.resultanalysis.CopyPathDataOperation
 
getDescription() - Method in class org.hkijena.jipipe.extensions.filesystem.resultanalysis.OpenPathDataOperation
 
getDescription() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.ParameterFormData
 
getDescription() - Method in class org.hkijena.jipipe.extensions.forms.FormsPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.graphannotation.GraphAnnotationPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.ij3d.display.AddROI3DToManagerOperation
 
getDescription() - Method in class org.hkijena.jipipe.extensions.ij3d.IJ3DPlugin
 
getDescription() - Method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurementColumn
 
getDescription() - Method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurementColumn
 
getDescription() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsNodeTypeCategory
 
getDescription() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.trackscheme.TrackSchemeDataDisplayOperation
 
getDescription() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.TrackMatePlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.ijweka.WekaPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.ilastik.IlastikPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2Plugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.ImageJAlgorithmsPlugin
 
getDescription() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementColumn
 
getDescription() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.OMEAccessorTemplate
 
getDescription() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddROIToActiveJIPipeImageViewerDataDisplay
 
getDescription() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddROIToJIPipeImageViewerDataDisplay
 
getDescription() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddToROIManagerDataDisplay
 
getDescription() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.OpenInImageJDataDisplay
 
getDescription() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImportImageJPathDataOperation
 
getDescription() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.Measurement
 
getDescription() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.MeasurementColumn
 
getDescription() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawer2DTool
 
getDescription() - Method in class org.hkijena.jipipe.extensions.imp.ImpPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionLoaderPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.multiparameters.MultiParameterAlgorithmsPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.multiparameters.MultiParametersPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.nodeexamples.LoadExampleContextMenuAction
 
getDescription() - Method in class org.hkijena.jipipe.extensions.nodetemplate.AddTemplateContextMenuAction
 
getDescription() - Method in class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplateBoxToolPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage
 
getDescription() - Method in class org.hkijena.jipipe.extensions.omero.OMEROPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.omnipose.OmniposePlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterItemParameterAccess
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterGenerator
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterTypeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterInputAccess
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterOutputAccess
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterParameterAccess
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterKeyAccess
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterValueAccess
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanParameterTypeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanPrimitiveParameterTypeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ByteParameterTypeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BytePrimitiveParameterTypeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.DoubleParameterTypeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.DoublePrimitiveParameterTypeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.FloatParameterTypeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.FloatPrimitiveParameterTypeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.IntParameterTypeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.IntPrimitiveParameterTypeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.LongParameterTypeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.LongPrimitiveParameterTypeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.NumberRangeParameterGenerator
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ShortParameterTypeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ShortPrimitiveParameterTypeInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ParameterColumn
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableCellAccess
 
getDescription() - Method in class org.hkijena.jipipe.extensions.parameters.StandardParametersPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.pipelinerender.PipelineRenderPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2AlgorithmInfo
 
getDescription() - Method in class org.hkijena.jipipe.extensions.plots.PlotsPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.plots.ui.resultanalysis.OpenPlotInJIPipeDataOperation
 
getDescription() - Method in class org.hkijena.jipipe.extensions.processes.ProcessesPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.python.PythonPlugin
 
getDescription() - Method in enum org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm.Dataset
 
getDescription() - Method in class org.hkijena.jipipe.extensions.r.RPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.scene3d.Scene3DPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.settings.StandardSettingsPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.strings.StringsPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.tables.display.CacheAwareOpenResultsTableInJIPipeDataOperation
 
getDescription() - Method in class org.hkijena.jipipe.extensions.tables.display.OpenResultsTableInImageJDataOperation
 
getDescription() - Method in class org.hkijena.jipipe.extensions.tables.display.OpenResultsTableInJIPipeTabDataOperation
 
getDescription() - Method in class org.hkijena.jipipe.extensions.tables.TablesPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.tools.ToolsPlugin
 
getDescription() - Method in class org.hkijena.jipipe.extensions.utils.contextmenu.ParameterExplorerContextMenuAction
 
getDescription() - Method in class org.hkijena.jipipe.extensions.utils.display.ImportJIPipeProjectDataOperation
 
getDescription() - Method in class org.hkijena.jipipe.extensions.utils.UtilitiesPlugin
 
getDescription() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
 
getDescription() - Method in class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency
 
getDescription() - Method in class org.hkijena.jipipe.ui.components.AddParameterDialog.Settings
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphCopyNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphCutNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphDuplicateNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphPasteNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentCopyNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentCutNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentPasteNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddBookmarkNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddNewCompartmentUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddNewNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ClearCacheNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.CollapseIOInterfaceNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DeleteCompartmentUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DeleteNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisablePassThroughNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableSaveOutputsNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableVirtualOutputNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnablePassThroughNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableSaveOutputsNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableVirtualOutputsNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ExportCompartmentAsJsonNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ExportCompartmentToNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ExportNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.GroupNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.InvertSelectionNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.IsolateNodesUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.JsonAlgorithmToGroupNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.LockNodeLocationSizeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.LowerUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIDownContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUILeftContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIRightContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIUpContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeContextActionWrapperUIContextAction
 
getDescription() - Method in interface org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.OpenCacheBrowserInWindowUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RaiseUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RemoveBookmarkNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RunAndShowIntermediateResultsNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RunAndShowResultsNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SelectAllNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SelectAndMoveNodeHereNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SendToBackgroundUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SendToForegroundUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SetNodeHotkeyContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UnlockNodeLocationSizeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheOnlyPredecessorsNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheShowIntermediateNodeUIContextAction
 
getDescription() - Method in class org.hkijena.jipipe.ui.history.CurrentStateSnapshot
 
getDescription() - Method in class org.hkijena.jipipe.ui.parameters.DynamicParameterEditorDialog.ParameterEntry
 
getDescription() - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderPackage
 
getDescriptionArea() - Method in class org.hkijena.jipipe.ui.components.FormPanel.GroupHeaderPanel
 
getDescriptionOf(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData
Returns the description of a data type
getDescriptionOf(Class<? extends JIPipeGraphNode>) - Static method in class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo
Returns the description of an algorithm
getDescriptionPlain() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
getDescriptionPlain() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
getDescriptionPlain() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
getDescriptionPlain() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
getDescriptionPlain() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry
 
getDesktopColor() - Method in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
Returns the desktop color.
getDesktopColor() - Method in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
Returns the desktop color.
getDesktopRenderingHints() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getDesktopRenderingHints() - Static method in class org.hkijena.jipipe.utils.UIUtils
 
getDespeckleIterations() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
getDetails() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry
 
getDevice() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJSettings
 
getDialog() - Method in class org.hkijena.jipipe.ui.components.AddAlgorithmSlotPanel
 
getDialog() - Method in class org.hkijena.jipipe.ui.components.AddParameterDialog
 
getDialog() - Method in class org.hkijena.jipipe.ui.components.EditAlgorithmSlotPanel
 
getDialog() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunExecuterUI
 
getDialogDescription() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstaller
The description of the installation dialog
getDialogDescription() - Method in class org.hkijena.jipipe.extensions.cellpose.installers.CellposeEasyInstaller
 
getDialogDescription() - Method in class org.hkijena.jipipe.extensions.ilastik.installers.IlastikEasyInstaller
 
getDialogDescription() - Method in class org.hkijena.jipipe.extensions.omnipose.installers.OmniposeEasyInstaller
 
getDialogDescription() - Method in class org.hkijena.jipipe.extensions.python.adapter.JIPipePythonAdapterLibraryEnvironmentInstaller
 
getDialogDescription() - Method in class org.hkijena.jipipe.extensions.python.installers.PythonEasyInstaller
 
getDialogDescription() - Method in class org.hkijena.jipipe.extensions.r.installers.REasyInstaller
 
getDialogHeading() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstaller
The heading of the installation dialog
getDialogHeading() - Method in class org.hkijena.jipipe.extensions.cellpose.installers.CellposeEasyInstaller
 
getDialogHeading() - Method in class org.hkijena.jipipe.extensions.ilastik.installers.IlastikEasyInstaller
 
getDialogHeading() - Method in class org.hkijena.jipipe.extensions.omnipose.installers.OmniposeEasyInstaller
 
getDialogHeading() - Method in class org.hkijena.jipipe.extensions.python.adapter.JIPipePythonAdapterLibraryEnvironmentInstaller
 
getDialogHeading() - Method in class org.hkijena.jipipe.extensions.python.installers.PythonEasyInstaller
 
getDialogHeading() - Method in class org.hkijena.jipipe.extensions.r.installers.REasyInstaller
 
getDialogType() - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
getDiameter() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
getDiameter() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
getDiameter() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
getDiameter() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
getDiameter() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
getDiameter() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
getDiameterAnnotation() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
getDiameterAnnotation() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
getDiameterAnnotation() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
getDiamThreshold() - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationThresholdSettings
 
getDiceCoefficientAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm
 
getDifference() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.DifferenceSpotSegmentation3DAlgorithm
 
getDilationErodeSteps() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm
 
getDilationIterations() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
getDimensionalityOf(Class<? extends ImagePlusData>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
Gets the dimensionality of this
getDimensionCOperation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
getDimensionOrder() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEExporterSettings
 
getDimensionTOperation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
getDimensionZOperation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
getDirectories() - Method in class org.hkijena.jipipe.api.JIPipeProjectDirectories
 
getDirectories() - Method in class org.hkijena.jipipe.api.JIPipeProjectMetadata
 
getDirectoryKey() - Method in class org.hkijena.jipipe.ui.components.PathEditor
 
getDirectoryMap() - Method in class org.hkijena.jipipe.api.JIPipeProject
Gets a map of user-defined directories
getDirectoryMap(Path) - Method in class org.hkijena.jipipe.api.JIPipeProjectDirectories
Gets a map of user-defined directories
getDirectPredecessorNodes(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns DIRECT predecessor algorithms of an algorithm
getDisableStoreToCacheNodes() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
Allows to set a list of nodes where storing to cache is disabled
getDisableStoreToDiskNodes() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
Allows to exclude specific nodes from saving any outputs to the disk
getDisconnectHighlight() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getDismissedEventEmitter() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox
 
getDisplayedMax() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.DisplayRange
 
getDisplayedMin() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.DisplayRange
 
getDisplayedParameters() - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
getDisplayName() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
Returns a name that includes the algorithm name and the slot name.
getDisplayName() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
getDisplayName() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns a name that provides human-readable information about the name and compartment
getDisplayName() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImagePlusResultImportRun
 
getDisplayName() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.OMEImageResultImportRun
 
getDisplayName() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
 
getDisplayName(JIPipeProjectWorkbench, JIPipeDataSlot, JIPipeDataTableMetadataRow, JIPipeExportedDataAnnotation) - Static method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotPreview
Returns a name that identifies this row
getDisplayName() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotRowUI
Returns a name that identifies this row
getDisplayOperation() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation
 
getDisplayOperations() - Method in class org.hkijena.jipipe.ui.cache.JIPipeDataTableRowUI
 
getDistanceExpression() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm
 
getDocument() - Method in class org.hkijena.jipipe.ui.components.FormPanel.HoverHelpEvent
 
getDocument() - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
getDocument() - Method in class org.hkijena.jipipe.ui.components.markdown.MarkdownReader
 
getDocumentation() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterCollectionContextAction
 
getDocumentation() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionContextAction
Documentation of this action
getDocumentation() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
getDocumentation() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterCollectionContextAction
 
getDocumentationDescription(SetJIPipeDocumentation) - Static method in class org.hkijena.jipipe.utils.DocumentationUtils
Returns the documentation description string if available.
getDocumentationDescription(AddJIPipeDocumentationDescription) - Static method in class org.hkijena.jipipe.utils.DocumentationUtils
Returns the documentation description string if available.
getDocumentationDescription(SetJIPipeDocumentation, Class<?>) - Static method in class org.hkijena.jipipe.utils.DocumentationUtils
Returns the documentation description string if available.
getDocumentationDescription(Class<?>) - Static method in class org.hkijena.jipipe.utils.DocumentationUtils
Returns the documentation description string if available.
getDocumentationPanel() - Method in class org.hkijena.jipipe.ui.components.DocumentedComponent
 
getDocumentationTabPane() - Method in class org.hkijena.jipipe.ui.components.FormPanel
 
getDocumentTab() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.DocumentTabComponent
 
getDocumentTabPane() - Method in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmWindow
 
getDocumentTabPane() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.DocumentTab
 
getDocumentTabPane() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.DocumentTabComponent
 
getDocumentTabPane() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.TabRenamedEvent
 
getDocumentTabPane() - Method in class org.hkijena.jipipe.ui.ijupdater.MissingRegistrationUpdateSiteResolver
 
getDocumentTabPane() - Method in class org.hkijena.jipipe.ui.JIPipeDummyWorkbench
 
getDocumentTabPane() - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWorkbench
 
getDocumentTabPane() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
getDocumentTabPane() - Method in interface org.hkijena.jipipe.ui.JIPipeWorkbench
 
getDoubleByDialog(Component, String, String, double, double, double) - Static method in class org.hkijena.jipipe.utils.UIUtils
Gets an integer by dialog
getDoubleValue() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.StringOrDouble
 
getDragAndDropBehavior() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getDrawer() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.overlay.RenderOverlay3DAlgorithm
 
getDrawer() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DToRGBAlgorithm
 
getDrawFilledOutlineMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
getDrawFilledOutlineMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
getDrawFilledOutlineMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
getDrawFilledOutlineMode() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
getDrawnArea(Point, Point, boolean, boolean) - Static method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.RectangleMaskDrawer2DTool
 
getDrawnFeature() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer.LabelSettings
 
getDrawnLabel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
getDrawnLabel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
getDrawnLabel() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
getDrawOutlineMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
getDrawOutlineMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
getDrawOutlineMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
getDrawOutlineMode() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
getDtype(Class<T>) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.Hdf5Utils
 
getDuplicate() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
getDuplicate() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRef
 
getDuplicateImage() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
Returns a duplicate of the contained image
getDuplicateImage() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.OMEImageData
Returns a duplicate of the contained image
getDynamic() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMaxima2DAlgorithm
 
getDynamic() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMaxima3DAlgorithm
 
getDynamic() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMinima2DAlgorithm
 
getDynamic() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMinima3DAlgorithm
 
getEasyInstallerRepositories() - Method in class org.hkijena.jipipe.extensions.cellpose.CellposeSettings
 
getEasyInstallerRepositories() - Method in class org.hkijena.jipipe.extensions.ilastik.IlastikSettings
 
getEasyInstallerRepositories() - Method in class org.hkijena.jipipe.extensions.omnipose.OmniposeSettings
 
getEasyInstallerRepositories() - Method in class org.hkijena.jipipe.extensions.python.adapter.PythonAdapterExtensionSettings
 
getEasyInstallerRepositories() - Method in class org.hkijena.jipipe.extensions.python.PythonExtensionSettings
 
getEasyInstallerRepositories() - Method in class org.hkijena.jipipe.extensions.r.RExtensionSettings
 
getEdge() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphConnection
 
getEdge() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
getEdgeFeature(DefaultWeightedEdge, String, double) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
Gets a feature from an edge.
getEdgeFeatureRange(String) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
Returns the range of values for a feature.
getEdgeLength(FilamentEdge, boolean, String) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
Gets the length of an edge in the specified unit
getEdgeMask() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesAlgorithm
 
getEdgesBetween(JIPipeGraphNode, JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Gets all edges between two algorithm nodes
getEditor(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.BooleanFormData
 
getEditor(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.DoubleFormData
 
getEditor(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.EnumFormData
 
getEditor(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.FormData
Gets a component that acts as the editor for the form data.
getEditor(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.GroupHeaderFormData
 
getEditor(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.IntegerFormData
 
getEditor(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
getEditor(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.StringFormData
 
getEditor(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.MaskDrawerFormData
 
getEditor(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.ROIDrawerFormData
 
getEigenvalueSelection() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
getEigenvalueSelection2D() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.Hessian2DAlgorithm
 
getElement() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateStructureElement2DAlgorithm
 
getElement() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateStructureElement3DAlgorithm
 
getElement() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm
 
getElement() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm
 
getEmail() - Method in class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment
 
getEmitter() - Method in class org.hkijena.jipipe.api.events.AbstractJIPipeEvent
 
getEmitter() - Method in interface org.hkijena.jipipe.api.events.JIPipeEvent
The first emitter that published the event Will not change if an event is re-emitted
getEmitter() - Method in class org.hkijena.jipipe.utils.ui.events.MouseClickedEvent
 
getEmitter() - Method in class org.hkijena.jipipe.utils.ui.events.MouseDraggedEvent
 
getEmitter() - Method in class org.hkijena.jipipe.utils.ui.events.MouseEnteredEvent
 
getEmitter() - Method in class org.hkijena.jipipe.utils.ui.events.MouseExitedEvent
 
getEmitter() - Method in class org.hkijena.jipipe.utils.ui.events.MouseMovedEvent
 
getEmitter() - Method in class org.hkijena.jipipe.utils.ui.events.MousePressedEvent
 
getEmitter() - Method in class org.hkijena.jipipe.utils.ui.events.MouseReleasedEvent
 
getEnd() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry
 
getEndpoints() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph
 
getEnhancementParameters() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
getEnhancementParameters() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
getEnhancementParameters() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
getEnqueuedEventEmitter() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
 
getEnsureMinNumberOfRows() - Method in class org.hkijena.jipipe.extensions.tables.nodes.GenerateColumnAlgorithm
 
getEntries() - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase
 
getEntries() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm
 
getEntries() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm
 
getEntries() - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.AnnotateWithJsonDataAlgorithm
 
getEntries() - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.ExtractJsonDataAsTableAlgorithm
 
getEntries() - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.AnnotateWithTextDataAlgorithm
 
getEntries() - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.TextDataToTableAlgorithm
 
getEntries() - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.AnnotateWithXPathDataAlgorithm
 
getEntries() - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm
 
getEntries() - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2
 
getEntries() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByExpressionAlgorithm
 
getEntries() - Method in class org.hkijena.jipipe.ui.components.FormPanel
 
getEntry(int) - Method in class org.hkijena.jipipe.ui.ijupdater.FileTableModel
 
getEntry() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection.LogEntryAddedEvent
 
getEntryClass() - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
 
getEnumValues(Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
Gets all enum values via reflection
getEnvironment() - Method in class org.hkijena.jipipe.extensions.ilastik.IlastikSettings
 
getEnvironment() - Method in class org.hkijena.jipipe.extensions.r.RExtensionSettings
 
getEnvironmentName() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectCondaEnvPythonInstaller.Configuration
 
getEnvironmentVariables() - Method in class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
getEnvironmentVariables() - Method in class org.hkijena.jipipe.extensions.python.PythonEnvironment
 
getEnvironmentVariables() - Method in class org.hkijena.jipipe.extensions.r.REnvironment
 
getEquivalentNode(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns the algorithm that has the same UUID as the foreign algorithm in the foreign graph.
getEquivalentRows(Set<String>) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Returns the row indices grouped by the values of the provided columns
getEquivalentSlot(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns the slot with the same name within the algorithm with the same ID.
getErosionIterations() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
getErroneousDataTypes() - Method in class org.hkijena.jipipe.JIPipeRegistryIssues
 
getErroneousNodes() - Method in class org.hkijena.jipipe.JIPipeRegistryIssues
 
getErroneousParameterTypes() - Method in class org.hkijena.jipipe.JIPipeRegistryIssues
 
getErroneousPlugins() - Method in class org.hkijena.jipipe.JIPipeRegistryIssues
 
getError() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
getErrorExplanation() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.CrasherAlgorithm
 
getErrorSolution() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.CrasherAlgorithm
 
getErrorStream() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree
 
getErrorTitle() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.CrasherAlgorithm
 
getErrorToolbar() - Method in class org.hkijena.jipipe.ui.components.JIPipeValidityReportUI
 
getEvaluator() - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
Returns the evaluator instance that should evaluate this expression type
getEvaluator() - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionParameter
 
getEvaluatorInstance() - Static method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionParameter
 
getExample() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
getException() - Method in class org.hkijena.jipipe.api.JIPipeRunnable.InterruptedEvent
 
getExecutablePath() - Method in class org.hkijena.jipipe.extensions.python.PythonEnvironment
 
getExecutablePathLinux() - Method in class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
getExecutablePathOSX() - Method in class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
getExecutablePathWindows() - Method in class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
getExecutorService() - Method in class org.hkijena.jipipe.api.JIPipeFixedThreadPool
Returns the ExecutorService or null.
getExpectedMemoryAllocationMegabytes(ImagePlus) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.Image3DRendererSettings
 
getExpectedNumberOfObjects() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
getExpectedStep() - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm
 
getExplanation() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry
 
getExportDelay() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.MacroWrapperAlgorithm
 
getExportDummyCanvas() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
A dummy ImageCanvas that is needed by some visualization algorithms for magnification Its magnification should be permanently 1.0
getExportedImageJDataType() - Method in class org.hkijena.jipipe.api.compat.DataTableImageJDataExporter
 
getExportedImageJDataType() - Method in class org.hkijena.jipipe.api.compat.EmptyImageJDataExporter
 
getExportedImageJDataType() - Method in interface org.hkijena.jipipe.api.compat.ImageJDataExporter
 
getExportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.cellpose.compat.CellposeModelImageJExporter
 
getExportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.cellpose.compat.CellposeSizeModelImageJExporter
 
getExportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.clij2.compat.CLIIJ2DataToImageWindowImageJExporter
 
getExportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.filesystem.compat.PathDataToTableImageJExporter
 
getExportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.ij3d.compat.ROI3DImageJExporter
 
getExportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.compat.IJ2DataToImageWindowImageJExporter
 
getExportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ImagePlusDataToImageWindowImageJExporter
 
getExportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.OMEImageToImageWindowImageJExporter
 
getExportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.RoiManagerImageJExporter
 
getExportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.tables.compat.ResultsTableDataImageJExporter
 
getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.api.compat.DataTableImageJDataExporter
 
getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.api.compat.EmptyImageJDataExporter
 
getExportedJIPipeDataType() - Method in interface org.hkijena.jipipe.api.compat.ImageJDataExporter
 
getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.cellpose.compat.CellposeModelImageJExporter
 
getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.cellpose.compat.CellposeSizeModelImageJExporter
 
getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.clij2.compat.CLIIJ2DataToImageWindowImageJExporter
 
getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.filesystem.compat.PathDataToTableImageJExporter
 
getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.ij3d.compat.ROI3DImageJExporter
 
getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.compat.IJ2DataToImageWindowImageJExporter
 
getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ImagePlusDataToImageWindowImageJExporter
 
getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.OMEImageToImageWindowImageJExporter
 
getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.RoiManagerImageJExporter
 
getExportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.tables.compat.ResultsTableDataImageJExporter
 
getExportedMagnification() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
Returns the magnification that export/render methods should apply
getExportedParameters() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
 
getExportedParameters() - Method in class org.hkijena.jipipe.api.grouping.JsonAlgorithm
 
getExportedParameters() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
getExportedParameters() - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
getExportedParameters() - Method in class org.hkijena.jipipe.ui.settings.JIPipeProjectInfoParameters
 
getExportedPreviewSizes() - Method in class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
getExportedSlotNames() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
getExporter() - Method in class org.hkijena.jipipe.api.compat.ImageJDataExporterUI
 
getExporter() - Method in class org.hkijena.jipipe.api.compat.ImageJDataExportOperation
 
getExporter() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportData
 
getExporter() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter
 
getExporter() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.ExportROI3DAlgorithm
Deprecated.
 
getExporter() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
getExporter() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm
 
getExporter() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportROIAlgorithm
Deprecated.
 
getExporter() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm
Deprecated.
 
getExporter() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm
Deprecated.
 
getExporter() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.BioFormatsExporter
Deprecated.
 
getExporter() - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.ExportScene3DToColladaAlgorithm
Deprecated.
 
getExporter() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToFilesByMetadataExporterRun.Settings
 
getExporterById(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry
 
getExporterId() - Method in class org.hkijena.jipipe.api.compat.ImageJDataExportOperation
 
getExporterSettings() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.OMEImageFromImagePlus
 
getExporterSettings() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.BioFormatsExporter
Deprecated.
 
getExporterSettings() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.BioFormatsExporter2
 
getExporterSettings() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.SetBioFormatsExporterSettings
 
getExporterSettings() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.OMEImageData
 
getExporterType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.RunImageJExporterAlgorithm
 
getExportHeight() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
getExportParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.RunImageJExporterAlgorithm
 
getExportWidth() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
getExpression() - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
 
getExpression() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ModifyPath
 
getExpression() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ModifyPathWithExpression
 
getExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.ColorToGreyscaleExpression2D
 
getExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression2DAlgorithm
 
getExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression3DAlgorithm
 
getExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyColorMathExpression2DExpression
 
getExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DExpression
 
getExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression
 
getExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm
 
getExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm
 
getExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ColorThresholdExpression2D
 
getExpression() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRange
 
getExpression() - Method in class org.hkijena.jipipe.extensions.tables.nodes.ModifyTableColumnNamesAlgorithm
 
getExpression() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.RunExpressionAlgorithm
 
getExpression() - Method in class org.hkijena.jipipe.utils.ui.ExpressionTesterUI
 
getExpressionC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
getExpressionList() - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm
Deprecated.
 
getExpressionRegistry() - Method in class org.hkijena.jipipe.JIPipe
 
getExpressionRegistry() - Method in interface org.hkijena.jipipe.JIPipeService
 
getExpressionT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
getExpressionZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
getExtension() - Method in class org.hkijena.jipipe.api.validation.contexts.JavaExtensionValidationReportContext
 
getExtension() - Method in class org.hkijena.jipipe.extensions.clij2.parameters.OpenCLKernelScript
 
getExtension() - Method in enum org.hkijena.jipipe.extensions.imp.datatypes.ImpImageOutputFormat
 
getExtension() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameter
Returns the default extension for this script
getExtension() - Method in class org.hkijena.jipipe.extensions.parameters.library.scripts.ImageJMacro
 
getExtension() - Method in class org.hkijena.jipipe.extensions.parameters.library.scripts.PythonScript
 
getExtension() - Method in class org.hkijena.jipipe.extensions.r.parameters.RScriptParameter
 
getExtension() - Method in class org.hkijena.jipipe.JIPipeService.ExtensionContentAddedEvent
 
getExtension() - Method in class org.hkijena.jipipe.JIPipeService.ExtensionContentRemovedEvent
 
getExtension() - Method in class org.hkijena.jipipe.JIPipeService.ExtensionDiscoveredEvent
 
getExtension() - Method in class org.hkijena.jipipe.JIPipeService.ExtensionRegisteredEvent
 
getExtension() - Method in class org.hkijena.jipipe.ui.extensions.ExtensionItemPanel
 
getExtensionBuilderLogo400() - Static method in class org.hkijena.jipipe.utils.UIUtils
 
getExtensionContentAddedEventEmitter() - Method in class org.hkijena.jipipe.JIPipe
 
getExtensionContentAddedEventEmitter() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
 
getExtensionContentAddedEventEmitter() - Method in interface org.hkijena.jipipe.JIPipeService
 
getExtensionContentRemovedEventEmitter() - Method in class org.hkijena.jipipe.JIPipe
 
getExtensionContentRemovedEventEmitter() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
 
getExtensionContentRemovedEventEmitter() - Method in interface org.hkijena.jipipe.JIPipeService
 
getExtensionDiscoveredEventEmitter() - Method in class org.hkijena.jipipe.JIPipe
 
getExtensionDiscoveredEventEmitter() - Method in interface org.hkijena.jipipe.JIPipeService
 
getExtensionFilters() - Method in class org.hkijena.jipipe.ui.components.PathEditor
 
getExtensionId() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry.ScheduledActivateExtensionEvent
 
getExtensionId() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry.ScheduledDeactivateExtensionEvent
 
getExtensionRegisteredEventEmitter() - Method in class org.hkijena.jipipe.JIPipe
 
getExtensionRegisteredEventEmitter() - Method in interface org.hkijena.jipipe.JIPipeService
 
getExtensionRegistry() - Method in class org.hkijena.jipipe.JIPipe
 
getExtensionRegistry() - Method in interface org.hkijena.jipipe.JIPipeService
 
getExtensions() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
getExtensions() - Method in enum org.hkijena.jipipe.extensions.imp.datatypes.ImpImageOutputFormat
 
getExtensionWorkbenchUI() - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWorkbenchPanel
 
getExternalDownloaderProcess() - Method in class org.hkijena.jipipe.extensions.settings.DownloadSettings
 
getExternalEnvironmentRegistry() - Method in class org.hkijena.jipipe.JIPipe
 
getExternalEnvironmentRegistry() - Method in interface org.hkijena.jipipe.JIPipeService
 
getExternalEnvironments(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Gathers all known external environments
getExternalEnvironments(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
getExternalEnvironments(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
getExternalEnvironments(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
getExternalEnvironments(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
getExternalEnvironments(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
getExternalEnvironments(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
getExternalEnvironments(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingPythonScriptAlgorithm
 
getExternalEnvironments(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingPythonScriptAlgorithm
 
getExternalEnvironments(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.extensions.python.algorithms.PythonScriptAlgorithm
 
getExternalEnvironments(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm
 
getExternalEnvironments(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.extensions.r.algorithms.IteratingRScriptAlgorithm
 
getExternalEnvironments(List<JIPipeEnvironment>) - Method in class org.hkijena.jipipe.extensions.r.algorithms.MergingRScriptAlgorithm
 
getExternalScriptFile() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameter
 
getExtractedParameters() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.AnnotationsToParametersAlgorithm
 
getExtraRuntimePartitions() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration
 
getFactorX() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.SmoothFilamentsAlgorithm
 
getFactorY() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.SmoothFilamentsAlgorithm
 
getFactoryData() - Method in class org.hkijena.jipipe.extensions.imagej2.algorithms.CreateIJ2OutOfBoundsFactoryAlgorithm
 
getFactoryType() - Method in class org.hkijena.jipipe.extensions.imagej2.algorithms.CreateIJ2OutOfBoundsFactoryAlgorithm
 
getFactorZ() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.SmoothFilamentsAlgorithm
 
getFadeTrackRange() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
getFailedExtensions() - Method in class org.hkijena.jipipe.JIPipe
 
getFallbackTemplateId() - Static method in class org.hkijena.jipipe.api.JIPipeProjectTemplate
 
getFalseNegativeErrorAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm
 
getFalsePositiveErrorAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm
 
getFalseString() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.BooleanFormData
 
getFeature() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeatureFilterParameter
 
getFeature() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeaturePenaltyParameter
 
getFeature() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeatureFilterParameter
 
getFeatureSettings() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingLabels2DAlgorithm
 
getFeatureSettings() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingLabels2DAlgorithm2
 
getFeatureSettings() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingMask2DAlgorithm
 
getFeatureSettings() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingMask2DAlgorithm2
 
getFeatureSettings() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingROI2DAlgorithm
 
getFeatureSettings() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingROI3DAlgorithm
 
getFieldClass() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess
 
getFieldClass() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterTypeInfo
 
getFieldClass() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.UserParameterDefinition
 
getFieldClass() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
 
getFieldClass() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess
 
getFieldClass() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
getFieldClass() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Returns the parameter data type
getFieldClass() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterTypeInfo
 
getFieldClass() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterItemParameterAccess
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterTypeInfo
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterInputAccess
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterOutputAccess
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterParameterAccess
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterKeyAccess
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterValueAccess
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanParameterTypeInfo
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanPrimitiveParameterTypeInfo
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ByteParameterTypeInfo
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BytePrimitiveParameterTypeInfo
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.DoubleParameterTypeInfo
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.DoublePrimitiveParameterTypeInfo
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.FloatParameterTypeInfo
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.FloatPrimitiveParameterTypeInfo
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.IntParameterTypeInfo
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.IntPrimitiveParameterTypeInfo
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.LongParameterTypeInfo
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.LongPrimitiveParameterTypeInfo
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ShortParameterTypeInfo
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ShortPrimitiveParameterTypeInfo
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ParameterColumn
 
getFieldClass() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableCellAccess
 
getFieldClassInfoId() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
getFieldClassInfoId() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ParameterColumn
 
getFieldValue(String, Object) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
Gets the value of a field
getFieldValue(String, Object, Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
Gets the value of a field
getFieldValue(Field, Object) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
Gets the value of a field
getFieldValue(Field, Object, Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
Gets the value of a field
getFilamentDrawer() - Method in class org.hkijena.jipipe.extensions.ijfilaments.settings.ImageViewerUIFilamentDisplaySettings
 
getFilamentsDrawer() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D
 
getFilamentsDrawer() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRGBAlgorithm
 
getFilamentsList() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
getFilamentsListControl() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D
 
getFilamentsManagerPlugin2D() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D.SelectionContextPanel
 
getFilamentsManagerPlugin3D() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D.SelectionContextPanel
 
getFileChooserComponent() - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
Gets the underlying file chooser component
getFileChooserType() - Method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
 
getFileFilter() - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
getFileFormat() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImage2Algorithm
 
getFileFormat() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
getFileFormat() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm
 
getFileFormat() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm
Deprecated.
 
getFileFormat() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm2
 
getFileFormat() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ResultsTableFromFile
 
getFileFormat() - Method in class org.hkijena.jipipe.extensions.imp.nodes.ExportImpImageAlgorithm
 
getFileFromModel(int) - Method in class org.hkijena.jipipe.ui.ijupdater.FileTableModel
 
getFileName() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileDataSource
 
getFileNameAnnotation() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotateWithPathProperties
 
getFileNameAnnotation() - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROTableAlgorithm
 
getFileNameGenerator() - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter
 
getFileNameGenerator() - Method in class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROImageAlgorithm
 
getFileNameGenerator() - Method in class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROTableAlgorithm
 
getFilePane() - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser.FileChooserComponentUI
 
getFilePath() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ConvertToExportedPath
 
getFilePath() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter2
 
getFilePath() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.ExportROI3DAlgorithm2
 
getFilePath() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImage2Algorithm
 
getFilePath() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportROIAlgorithm2
 
getFilePath() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm2
 
getFilePath() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2
 
getFilePath() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.BioFormatsExporter2
 
getFilePath() - Method in class org.hkijena.jipipe.extensions.imp.nodes.ExportImpImageAlgorithm
 
getFilePath() - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionRegistrationTask
 
getFilePath() - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.ExportScene3DToColladaAlgorithm2
 
getFiles() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileListDataSource
 
getFiles() - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderRepository
 
getFiles() - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderRepository
 
getFilesCollection() - Method in class org.hkijena.jipipe.ui.ijupdater.ManagerUI
 
getFilesCollection() - Method in class org.hkijena.jipipe.ui.ijupdater.RefreshRepositoryRun
 
getFilesCollection() - Method in class org.hkijena.jipipe.ui.ijupdater.UpdateSiteListUI
 
getFileSystemPath() - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeDataStorage
Returns a path on the file system where data can be read/written This path is always ensured to exist.
getFileSystemPath() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage
 
getFileSystemPath() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage
 
getFileSystemPath() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage
 
getFileSystemPath() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPWriteDataStorage
 
getFill() - Method in class org.hkijena.jipipe.utils.ui.RoundedLineBorder
 
getFillBox() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Returns the flag that controls whether or not the box is filled.
getFillColor() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory
 
getFillColor() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory
 
getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory
 
getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory
 
getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory
 
getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory
 
getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory
 
getFillColor() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory
 
getFillColor() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
getFillColor() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
getFillColor() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
getFillColor() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
getFillColor() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry
 
getFillColor() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory
The fill color for algorithm nodes
getFillColor() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.TextBoxAnnotationGraphNode.ShapeParameters
 
getFillColor() - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
getFillColor() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
getFillColor() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
getFillColor() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsNodeTypeCategory
 
getFillColor() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode
 
getFillColor() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertTracksToRoiNode
 
getFillColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.ROIProperties
 
getFillColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
getFillColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
getFillColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
getFillColor() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
getFillColor() - Method in interface org.hkijena.jipipe.ui.components.icons.ColorIcon
 
getFillColor() - Method in class org.hkijena.jipipe.ui.components.icons.OverlayColorIcon
 
getFillColor() - Method in class org.hkijena.jipipe.ui.components.icons.SolidColorIcon
 
getFillColor() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
getFillColorAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
getFillColorFor(JIPipeNodeInfo) - Static method in class org.hkijena.jipipe.utils.UIUtils
Returns a fill color for JIPipeNodeInfo
getFillMeasurement() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ColorRoi3DByStatisticsAlgorithm
 
getFillMeasurement() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm
 
getFilter() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.FilterByAnnotation
 
getFilter() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.FilterByAnnotationIfElse
 
getFilter() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm
 
getFilter() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.FilterFilamentEdgesByProperties
 
getFilter() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.FilterFilamentsByProperties
 
getFilter() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.FilterFilamentVerticesByProperties
 
getFilter() - Method in class org.hkijena.jipipe.extensions.ijfilaments.parameters.EdgeMaskParameter
 
getFilter() - Method in class org.hkijena.jipipe.extensions.ijfilaments.parameters.VertexMaskParameter
 
getFilter() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SpotFilterNode
 
getFilter() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TrackFilterNode
 
getFilter() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByThicknessAlgorithm
 
getFilter() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm
 
getFilter() - Method in class org.hkijena.jipipe.extensions.omero.parameters.AnnotationsToOMEROKeyValuePairExporter
 
getFilter() - Method in class org.hkijena.jipipe.extensions.omero.parameters.OMEROKeyValuePairToAnnotationImporter
 
getFilter() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnsToAnnotationsAlgorithm
 
getFilter() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm
 
getFilter() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm
 
getFilteredAndSortedItems() - Method in class org.hkijena.jipipe.ui.components.pickers.PickerDialog
 
getFilteredItems() - Method in class org.hkijena.jipipe.ui.documentation.JIPipeAlgorithmCompendiumUI
 
getFilteredItems() - Method in class org.hkijena.jipipe.ui.documentation.JIPipeCompendiumUI
Returns all items that should be available
getFilteredItems() - Method in class org.hkijena.jipipe.ui.documentation.JIPipeDataTypeCompendiumUI
 
getFilteredItems() - Method in class org.hkijena.jipipe.ui.extensions.ExtensionAlgorithmCompendiumUI
 
getFilteredItems() - Method in class org.hkijena.jipipe.ui.extensions.ExtensionDataTypeCompendiumUI
 
getFilterExpression() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.RemoveROI3DMetadataAlgorithm
 
getFilterExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
 
getFilterExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.RemoveImageMetadataAlgorithm
 
getFilterExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.RemoveROIMetadataAlgorithm
 
getFilterFunction() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
getFilterFunction() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
getFilterIndex() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersAdaptiveAlgorithm
 
getFilterIndex() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersAlgorithm
 
getFilterIndex() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersCloseAlgorithm
 
getFilterIndex() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersLocalMaxAlgorithm
 
getFilterIndex() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersMaxAlgorithm
 
getFilterIndex() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersMeanAlgorithm
 
getFilterIndex() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersMedianAlgorithm
 
getFilterIndex() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersMinAlgorithm
 
getFilterIndex() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersOpenAlgorithm
 
getFilterIndex() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersSobelAlgorithm
 
getFilterIndex() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersTopHatAlgorithm
 
getFilterIndex() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersVarianceAlgorithm
 
getFilteringParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
getFilters() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.FilterPaths
 
getFilters() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ListFiles
 
getFilters() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ListSubfolders
 
getFilters() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm
 
getFilters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm
 
getFilters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm
 
getFilters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm
 
getFilters() - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListDatasetsAlgorithm
 
getFilters() - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListGroupsAlgorithm
 
getFilters() - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListImagesAlgorithm
 
getFilters() - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListProjectsAlgorithm
 
getFilters() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnToNumericAlgorithm
 
getFilters() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnToStringAlgorithm
 
getFilters() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RemoveColumnAlgorithm
 
getFilters() - Method in class org.hkijena.jipipe.extensions.tables.nodes.filter.FilterTableRowsAlgorithm
 
getFilters() - Method in class org.hkijena.jipipe.extensions.tables.nodes.filter.FilterTablesAlgorithm
 
getFinalOutputPath() - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderPackage
 
getFinishedEventEmitter() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
 
getFinishedEventEmitter() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunWorker
 
getFinishedMessage() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstaller
The message shown after the operation is finished
getFinishedMessage() - Method in class org.hkijena.jipipe.extensions.cellpose.installers.CellposeEasyInstaller
 
getFinishedMessage() - Method in class org.hkijena.jipipe.extensions.ilastik.installers.IlastikEasyInstaller
 
getFinishedMessage() - Method in class org.hkijena.jipipe.extensions.omnipose.installers.OmniposeEasyInstaller
 
getFinishedMessage() - Method in class org.hkijena.jipipe.extensions.python.adapter.JIPipePythonAdapterLibraryEnvironmentInstaller
 
getFinishedMessage() - Method in class org.hkijena.jipipe.extensions.python.installers.PythonEasyInstaller
 
getFinishedMessage() - Method in class org.hkijena.jipipe.extensions.r.installers.REasyInstaller
 
getFirst() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceCube
 
getFirstAccess() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess
 
getFirstColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm
 
getFirstComponent() - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Action
 
getFirstIndex() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
getFirstInputSlot() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm
 
getFirstInputSlot() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the first input slot according to the slot order.
GetFirstIntegratingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.integrating
Implements calculating the sum
GetFirstIntegratingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.integrating.GetFirstIntegratingColumnOperation
 
GetFirstItemFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
GetFirstItemFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.GetFirstItemFunction
 
getFirstName() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
getFirstOutputSlot() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the first output slot according to the slot order.
getFitMode() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
getFixedName() - Method in class org.hkijena.jipipe.api.JIPipeProjectTemplate
Returns the metadata name if the template is resource-based or registered via the Java API.
getFlags() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
getFlipMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformFlip2DAlgorithm
 
getFlowThreshold() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationThresholdSettings
 
getFlowThreshold() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationThresholdSettings_Old
Deprecated.
 
getFlowThreshold() - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationThresholdSettings
 
getFolderPath() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderDataSource
 
getFolderPaths() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderListDataSource
 
getFollowedDimension() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Video2DExporterRun
 
getFontFamily() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters
 
getFontFamily() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings
 
getFontFamily() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
getFontFamily() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings
 
getFontFamily() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
getFontSize() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters
 
getFontSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings
 
getFontSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
getFontSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
getFontSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
getFontSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings
 
getFontSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
getFontStyle() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters
 
getFontStyle() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings
 
getFontStyle() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
getFontStyle() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings
 
getFontStyle() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
getForcedLineThickness() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm
 
getForcedLineThickness() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm
 
getForcedLineThickness() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm
 
getForcedLineThickness() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm
 
getForcedVertexRadius() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm
 
getForcedVertexRadius() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm
 
getForcedVertexRadius() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm
 
getForcedVertexRadius() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm
 
getForceNumColumns() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
getForceNumRows() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
getForcePythonVersion() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller.Configuration
 
getForeground() - Method in enum org.hkijena.jipipe.ui.components.MessagePanel.MessageType
 
getForegroundColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
getForegroundColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
getFormatName() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Stack2DExporterRun
 
getFormatVersion() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
Returns the format version for storage in the JSON file.
getFormData() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.SimpleFormGeneratorAlgorithm
 
getFormPanel() - Method in class org.hkijena.jipipe.ui.components.FormPanel.HoverHelpEvent
 
getFrame() - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
getFrame() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.NonSpatialPoint3d
 
getFrameLocation() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
getFrameLocation() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
getFramePosition() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
The overall frame position of the ROIs.
getFramesSizeAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
getFullName(JIPipeRuntimePartition) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration
 
getFunction() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterCollectionContextAction
 
getFunction() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ExpressionFunctionEntry
 
getFunction() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
 
getFunction() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateFromMathExpression2D
 
getFunction() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
 
getFunctionParameter() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterInputAccess
 
getFunctionParameter() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterOutputAccess
 
getFunctionParameter() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterParameterAccess
 
getFunctions() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractAndReplaceAnnotation
 
getGateway() - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROGateway
 
getGaussianAlgorithm() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.IlluminationCorrection2DAlgorithm
 
getGaussianKernelRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm
 
getGaussianKernelWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm
 
getGaussianSigma() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm
 
getGaussPC() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.GaussianFitSpotSegmentation3DAlgorithm
 
getGaussSigma() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
getGcEventEmitter() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph
 
getGeneratedAnnotation() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithDataString
 
getGeneratedAnnotation() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithSourceSlot
 
getGeneratedAnnotation() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.GenerateRandomUniqueAnnotation
 
getGeneratedAnnotation() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.GenerateUniqueAnnotation
 
getGeneratedAnnotation() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.SimpleFileAnnotationGenerator
 
getGeneratedAnnotation() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.SimpleFolderAnnotationGenerator
 
getGeneratedAnnotation() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.SimplePathAnnotationGenerator
 
getGeneratedAnnotation() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.ExplodeRoi3DListAlgorithm
 
getGeneratedAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.split.ExplodeRoiAlgorithm
 
getGeneratedAnnotation() - Method in class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableIntoColumnsAlgorithm
 
getGeneratedAnnotationName() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SimplifyAnnotationsAlgorithm
 
getGeneratedAnnotations() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByProjectPaths
 
getGeneratedAnnotations() - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateDataWithTableValues
 
getGeneratedColumns() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator
 
getGeneratedImageType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageAlgorithm
 
getGeneratedImageType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
 
getGeneratedImageType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ImagePlusFromFile
 
getGeneratedRows() - Method in class org.hkijena.jipipe.extensions.tables.nodes.GenerateTableFromExpressionAlgorithm
 
getGeneratedType() - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnGeneratorParameter
 
getGeneratedValues() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterGenerator
 
getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.api.looping.LoopStartNode
Deprecated.
 
getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm
 
getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm
 
getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm
 
getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm
 
getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm
 
getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm
 
getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm
 
getGenerationSettingsInterface() - Method in interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationStepAlgorithm
Returns the batch generation settings as interface
getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.IteratingFormProcessorAlgorithm
 
getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.MergingFormProcessorAlgorithm
 
getGenerationSettingsInterface() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.SimpleIteratingFormProcessorAlgorithm
 
getGeneratorsFor(Class<?>) - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry
Returns all generators for the parameter class
getGeneratorType() - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnGeneratorParameter
 
getGeometry() - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.CreateLineMeshAlgorithm
 
getGeometry() - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.CreateSphereMeshAlgorithm
 
getGpuDevice() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeGPUSettings
 
getGpuSettings() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
getGpuSettings() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
getGpuSettings() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
getGpuSettings() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
getGpuSettings() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
getGradientRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
getGradientStops() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.LUTData
 
getGraph() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
getGraph() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection
Returns the reference to the graph.
getGraph() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal
 
getGraph() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal.Snapshot
 
getGraph() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal.Snapshot
 
getGraph() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
Gets the node type stored inside the data.
getGraph() - Method in class org.hkijena.jipipe.api.JIPipeProject
 
getGraph() - Method in class org.hkijena.jipipe.api.looping.LoopGroup
 
getGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
getGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.GraphChangedEvent
 
getGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeAddedEvent
 
getGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeConnectedEvent
 
getGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeDisconnectedEvent
 
getGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeRemovedEvent
 
getGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphConnection
 
getGraph() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun
 
getGraph() - Method in class org.hkijena.jipipe.ui.bookmarks.BookmarkListPanel
 
getGraph() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getGraph() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
getGraphCanvas() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool
 
getGraphCanvasUI() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.GraphCanvasUpdatedEvent
 
getGraphCanvasUI() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
getGraphCanvasUpdatedEventEmitter() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getGraphChangedEventEmitter() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
getGraphEditor() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
getGraphEditor() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool
 
getGraphEditor() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
getGraphEditor() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool
 
getGraphEditor() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
getGraphEditor() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
getGraphEditor() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
getGraphEditorCursor() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getGraphEditorToolRegistry() - Method in class org.hkijena.jipipe.JIPipe
 
getGraphEditorToolRegistry() - Method in interface org.hkijena.jipipe.JIPipeService
 
getGraphEditorUI() - Method in class org.hkijena.jipipe.ui.bookmarks.BookmarkListPanel
 
getGraphEditorUI() - Method in class org.hkijena.jipipe.ui.extension.GraphEditorToolBarButtonExtension
 
getGraphEditorUI() - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties.JIPipePipelineSingleAlgorithmSelectionPanelUI
 
getGraphEditorUI() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.properties.JIPipeSingleCompartmentSelectionPanelUI
 
getGraphEditorUI() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getGraphMenu() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
getGraphNode() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
getGraphNodes() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns the set of node instances.
getGraphNodeUUIDs() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns the set of node UUIDs.
getGraphPostprocessing() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
getGraphRun() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNodeRunContext
Gets the JIPipeGraphRun that is currently executing
getGraphUISettings() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
getGreenRedThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
getGreenThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
getGridColor() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
getGridHeight() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode
 
getGridHeight() - Method in enum org.hkijena.jipipe.ui.grapheditor.JIPipeGraphViewMode
 
getGridWidth() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode
 
getGridWidth() - Method in enum org.hkijena.jipipe.ui.grapheditor.JIPipeGraphViewMode
 
getGroupedBySource() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Gets the parameters grouped by the source
getGroupHeaderPanels() - Method in class org.hkijena.jipipe.ui.components.FormPanel
 
getGroupId() - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROGroupReferenceData
 
getGroupIds() - Method in class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROGroupReferenceDataSource
 
getGroupInput() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
Gets the graphs' input node
getGroupInput() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
Gets the graphs's input node
getGroupName() - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.GroupSceneAlgorithm
 
getGroupOutput() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
Gets the graphs' output node
getGroupOutput() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
Gets the graphs's output node
gethBarWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
getHdf5Path() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.ExportIlastikHDF5ImageAlgorithm
 
getHdf5Path() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.ImportIlastikHDF5ImageAlgorithm
 
getHeaderPanelBackground() - Static method in class org.hkijena.jipipe.utils.UIUtils
 
getHeading() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
getHeavyIntermediateAlgorithmOutputSlots() - Method in class org.hkijena.jipipe.api.JIPipeProject
Returns a list of all nodes that generate heavy data (LabelAsJIPipeHeavyData) and are intermediate (see getIntermediateAlgorithms()).
getHeight() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeEmptyThumbnailData
 
getHeight() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData
 
getHeight() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData
 
getHeight() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData
 
getHeight() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData
 
getHeight() - Method in interface org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailData
The height if hasSize() is true Otherwise, will return 0
getHeight() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGenerationRun
 
getHeight() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap
 
getHeight() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateZeroImage
 
getHeight() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateFromMathExpression2D
 
getHeight() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
 
getHeight() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
getHeight() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageDimensions
 
getHeight() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.SnapshotSettings
 
getHeight() - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
getHeight() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
getHeight() - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Action
 
getHeightAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
getHeightTolerance() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm
 
getHighlightColor() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
getHighlightedComponents() - Method in class org.hkijena.jipipe.ui.components.FormPanel.FormPanelContentPanel
 
getHighThreshold() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.HysteresisSegmentation3DAlgorithm
 
getHighThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm
 
getHistogramNameAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
getHistogramType() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
getHistoryChangedEventEmitter() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal
 
getHistoryChangedEventEmitter() - Method in class org.hkijena.jipipe.api.history.JIPipeDummyGraphHistoryJournal
 
getHistoryChangedEventEmitter() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
 
getHistoryChangedEventEmitter() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal
 
getHistoryJournal() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal.Snapshot
 
getHistoryJournal() - Method in class org.hkijena.jipipe.api.history.JIPipeHistoryJournal.HistoryChangedEvent
 
getHistoryJournal() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal.Snapshot
 
getHistoryJournal() - Method in class org.hkijena.jipipe.api.JIPipeProject
 
getHistoryJournal() - Method in class org.hkijena.jipipe.ui.components.AddAlgorithmSlotPanel
 
getHistoryJournal() - Method in class org.hkijena.jipipe.ui.components.EditAlgorithmSlotPanel
 
getHistoryJournal() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getHistoryJournal() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
getHistoryJournal() - Method in class org.hkijena.jipipe.ui.history.HistoryJournalUI
 
gethLabel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
getHorizontalBarSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
getHorizontalBarSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
getHorizontalLabel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings
 
getHorizontalLabel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings
 
getHost() - Method in class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment
 
getHotkeyFor(UUID, UUID) - Method in class org.hkijena.jipipe.ui.grapheditor.NodeHotKeyStorage
 
getHotkeys() - Method in class org.hkijena.jipipe.ui.grapheditor.NodeHotKeyStorage
 
getHoughArray() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines
 
getHoverHelpEventEmitter() - Method in class org.hkijena.jipipe.ui.components.FormPanel
 
getHtml() - Method in class org.hkijena.jipipe.extensions.parameters.library.markup.HTMLText
 
getHTML() - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
getHTMLByDialog(JIPipeWorkbench, Component, String, String, HTMLText) - Static method in class org.hkijena.jipipe.utils.UIUtils
Gets a formatted HTML string by dialog
getHueThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
getIcon() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory
 
getIcon() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation
 
getIcon() - Method in interface org.hkijena.jipipe.api.data.JIPipeDataOperation
 
getIcon() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData
 
getIcon() - Method in class org.hkijena.jipipe.api.environments.JIPipeEnvironment
Returns the icon displayed in the UI for the current status
getIcon() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
getIcon() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool
 
getIcon() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
getIcon() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool
 
getIcon() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
getIcon() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
getIcon(Object) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm.IterationModeEnumInfo
 
getIcon() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal.Snapshot
 
getIcon() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournalSnapshot
 
getIcon() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal.Snapshot
 
getIcon() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
getIcon() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory
 
getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory
 
getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory
 
getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory
 
getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory
 
getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory
 
getIcon() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory
 
getIcon() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
getIcon() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
getIcon() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
getIcon() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
getIcon() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry
 
getIcon(Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeColumnMatchingEnumInfo
 
getIcon() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
Gets the icon for this node info
getIcon() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory
Icon shown in the UI
getIcon() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction
 
getIcon() - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry.InstallerEntry
 
getIcon() - Method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry.Sheet
 
getIcon(JIPipeRuntimePartition) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration
 
getIcon() - Method in class org.hkijena.jipipe.extensions.core.data.CopyContainingFolderDataImportOperation
 
getIcon() - Method in class org.hkijena.jipipe.extensions.core.data.DefaultDataDisplayOperation
 
getIcon() - Method in class org.hkijena.jipipe.extensions.core.data.OpenContainingFolderDataImportOperation
 
getIcon() - Method in class org.hkijena.jipipe.extensions.core.data.OpenInNativeApplicationDataImportOperation
 
getIcon() - Method in class org.hkijena.jipipe.extensions.core.data.OpenTextInJIPipeDataOperation
 
getIcon() - Method in class org.hkijena.jipipe.extensions.core.nodes.JIPipeCommentNode
 
getIcon() - Method in class org.hkijena.jipipe.extensions.filesystem.resultanalysis.CopyPathDataOperation
 
getIcon() - Method in class org.hkijena.jipipe.extensions.filesystem.resultanalysis.OpenPathDataOperation
 
getIcon() - Method in class org.hkijena.jipipe.extensions.ij3d.display.AddROI3DToManagerOperation
 
getIcon() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsNodeTypeCategory
 
getIcon() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.trackscheme.TrackSchemeDataDisplayOperation
 
getIcon(Object) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelColorMapEnumItemInfo
 
getIcon() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddROIToActiveJIPipeImageViewerDataDisplay
 
getIcon() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddROIToJIPipeImageViewerDataDisplay
 
getIcon() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddToROIManagerDataDisplay
 
getIcon() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.OpenInImageJDataDisplay
 
getIcon() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImportImageJPathDataOperation
 
getIcon(Object) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.BitDepthEnumItemInfo
 
getIcon(Object) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.OptionalBitDepthEnumItemInfo
 
getIcon() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawer2DTool
 
getIcon() - Method in class org.hkijena.jipipe.extensions.nodeexamples.LoadExampleContextMenuAction
 
getIcon() - Method in class org.hkijena.jipipe.extensions.nodetemplate.AddTemplateContextMenuAction
 
getIcon() - Method in class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment
 
getIcon(Object) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DefaultEnumItemInfo
 
getIcon(Object) - Method in interface org.hkijena.jipipe.extensions.parameters.api.enums.EnumItemInfo
Extracts an icon for the enum value
getIcon(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.colors.ColorMapEnumItemInfo
 
getIcon() - Method in class org.hkijena.jipipe.extensions.plots.ui.resultanalysis.OpenPlotInJIPipeDataOperation
 
getIcon(Object) - Method in class org.hkijena.jipipe.extensions.plots.utils.ColorMapEnumItemInfo
 
getIcon() - Method in class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
getIcon() - Method in class org.hkijena.jipipe.extensions.python.PythonEnvironment
 
getIcon() - Method in class org.hkijena.jipipe.extensions.python.PythonPackageLibraryEnvironment
 
getIcon(Object) - Method in class org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm.DatasetEnumItemInfo
 
getIcon() - Method in class org.hkijena.jipipe.extensions.r.REnvironment
 
getIcon() - Method in class org.hkijena.jipipe.extensions.tables.display.CacheAwareOpenResultsTableInJIPipeDataOperation
 
getIcon() - Method in class org.hkijena.jipipe.extensions.tables.display.OpenResultsTableInImageJDataOperation
 
getIcon() - Method in class org.hkijena.jipipe.extensions.tables.display.OpenResultsTableInJIPipeTabDataOperation
 
getIcon() - Method in class org.hkijena.jipipe.extensions.utils.contextmenu.ParameterExplorerContextMenuAction
 
getIcon() - Method in class org.hkijena.jipipe.extensions.utils.display.ImportJIPipeProjectDataOperation
 
getIcon() - Method in class org.hkijena.jipipe.ui.components.ColorChooserButton
 
getIcon() - Method in class org.hkijena.jipipe.ui.components.icons.ZoomIcon
 
getIcon() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.DocumentTab
 
getIcon() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.SingletonTab
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphCopyNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphCutNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphDuplicateNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphPasteNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentCopyNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentCutNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentPasteNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddBookmarkNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddNewCompartmentUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddNewNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ClearCacheNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.CollapseIOInterfaceNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DeleteCompartmentUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DeleteNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisablePassThroughNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableSaveOutputsNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableVirtualOutputNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnablePassThroughNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableSaveOutputsNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableVirtualOutputsNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ExportCompartmentAsJsonNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ExportCompartmentToNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ExportNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.GroupNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.InvertSelectionNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.IsolateNodesUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.JsonAlgorithmToGroupNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.LockNodeLocationSizeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.LowerUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIDownContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUILeftContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIRightContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIUpContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeContextActionWrapperUIContextAction
 
getIcon() - Method in interface org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.OpenCacheBrowserInWindowUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RaiseUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RemoveBookmarkNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RunAndShowIntermediateResultsNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RunAndShowResultsNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SelectAllNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SelectAndMoveNodeHereNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SendToBackgroundUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SendToForegroundUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SetNodeHotkeyContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UnlockNodeLocationSizeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheOnlyPredecessorsNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheShowIntermediateNodeUIContextAction
 
getIcon() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
getIcon() - Method in class org.hkijena.jipipe.ui.history.CurrentStateSnapshot
 
getIcon128FromResources(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
Returns an icon from JIPipe resources
getIcon128FromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager
getIcon128URLFromResources(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
Returns the URL of a 128x128 icon.
getIcon12FromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager
getIcon16FromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager
getIcon16URLFromResources(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
Returns the URL of a 16x16 icon.
getIcon32FromResources(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
Returns an icon from JIPipe resources
getIcon32FromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager
getIcon32URLFromResources(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
Returns the URL of a 32x32 icon.
getIcon64FromResources(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
Returns an icon from JIPipe resources
getIcon64FromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager
getIcon64URLFromResources(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
Returns the URL of a 64x64 icon.
getIcon8FromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager
getIconFor(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Returns the icon for a datatype
getIconFor(JIPipeNodeInfo) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Returns the icon for a node
getIconFromColor(Color) - Static method in class org.hkijena.jipipe.utils.UIUtils
Creates 16x16 a color icon
getIconFromResources(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
Returns an icon from JIPipe resources
getIconFromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager
getIconHeight() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelColorMapIcon
 
getIconHeight() - Method in class org.hkijena.jipipe.extensions.parameters.library.colors.ColorMapIcon
 
getIconHeight() - Method in class org.hkijena.jipipe.extensions.plots.utils.ColorMapIcon
 
getIconHeight() - Method in class org.hkijena.jipipe.ui.components.icons.AnimatedIcon
 
getIconHeight() - Method in class org.hkijena.jipipe.ui.components.icons.MonochromeColorIcon
 
getIconHeight() - Method in class org.hkijena.jipipe.ui.components.icons.NewThrobberIcon
 
getIconHeight() - Method in class org.hkijena.jipipe.ui.components.icons.OverlayColorIcon
 
getIconHeight() - Method in class org.hkijena.jipipe.ui.components.icons.SolidColorIcon
 
getIconHeight() - Method in class org.hkijena.jipipe.ui.components.icons.ZoomIcon
 
getIconHeight() - Method in class org.hkijena.jipipe.utils.ui.CheckBoxIcon
 
getIconHeight() - Method in class org.hkijena.jipipe.utils.ui.CheckBoxMenuItemIcon
 
getIconInverted12FromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager
getIconInverted32FromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager
getIconInvertedFromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager
getIconName() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.IconRef
 
getIcons128BasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
 
getIcons16BasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
 
getIcons32BasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
 
getIcons64BasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
 
getIconURL() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
Gets the icon for this node info
getIconURL() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterCollectionContextAction
 
getIconURL() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionContextAction
URL to the icon
getIconURL() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
getIconURL() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterCollectionContextAction
 
getIconURLFor(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
 
getIconURLFor(JIPipeDataInfo) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
 
getIconURLFor(JIPipeNodeInfo) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Returns the icon resource path URL for a node
getIconURLFromResources(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
Returns the URL of a 16x16 icon.
getIconURLFromResources(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Returns an icon from JIPipe resources If you want to utilize resources from your Java extension, use JIPipeResourceManager
getIconWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelColorMapIcon
 
getIconWidth() - Method in class org.hkijena.jipipe.extensions.parameters.library.colors.ColorMapIcon
 
getIconWidth() - Method in class org.hkijena.jipipe.extensions.plots.utils.ColorMapIcon
 
getIconWidth() - Method in class org.hkijena.jipipe.ui.components.icons.AnimatedIcon
 
getIconWidth() - Method in class org.hkijena.jipipe.ui.components.icons.MonochromeColorIcon
 
getIconWidth() - Method in class org.hkijena.jipipe.ui.components.icons.NewThrobberIcon
 
getIconWidth() - Method in class org.hkijena.jipipe.ui.components.icons.OverlayColorIcon
 
getIconWidth() - Method in class org.hkijena.jipipe.ui.components.icons.SolidColorIcon
 
getIconWidth() - Method in class org.hkijena.jipipe.ui.components.icons.ZoomIcon
 
getIconWidth() - Method in class org.hkijena.jipipe.utils.ui.CheckBoxIcon
 
getIconWidth() - Method in class org.hkijena.jipipe.utils.ui.CheckBoxMenuItemIcon
 
getId() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory
 
getId() - Method in interface org.hkijena.jipipe.api.data.context.JIPipeDataContext
Gets the ID of the context
getId() - Method in class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext
 
getId() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation
 
getId() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
 
getId() - Method in interface org.hkijena.jipipe.api.data.JIPipeDataOperation
 
getId() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
getId() - Method in class org.hkijena.jipipe.api.JIPipeProjectTemplate
 
getId() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
getId() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
getId() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory
 
getId() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
getId() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory
 
getId() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory
 
getId() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory
 
getId() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory
 
getId() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
getId() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory
 
getId() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory
 
getId() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
getId() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
getId() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
getId() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
getId() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry
 
getId() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo
 
getId() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
getId() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
Generates an Id for this info
getId() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory
Unique identifier of this category
getId() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
getId() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterTypeInfo
 
getId() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterTypeInfo
 
getId() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ColumnOperationEntry
 
getId() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ExpressionFunctionEntry
 
getId() - Method in enum org.hkijena.jipipe.extensions.cellpose.CellposeModel
 
getId() - Method in enum org.hkijena.jipipe.extensions.cellpose.CellposePretrainedModel
 
getId() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.core.data.CopyContainingFolderDataImportOperation
 
getId() - Method in class org.hkijena.jipipe.extensions.core.data.DefaultDataDisplayOperation
 
getId() - Method in class org.hkijena.jipipe.extensions.core.data.OpenContainingFolderDataImportOperation
 
getId() - Method in class org.hkijena.jipipe.extensions.core.data.OpenInNativeApplicationDataImportOperation
 
getId() - Method in class org.hkijena.jipipe.extensions.core.data.OpenTextInJIPipeDataOperation
 
getId() - Method in class org.hkijena.jipipe.extensions.filesystem.resultanalysis.CopyPathDataOperation
 
getId() - Method in class org.hkijena.jipipe.extensions.filesystem.resultanalysis.OpenPathDataOperation
 
getId() - Method in class org.hkijena.jipipe.extensions.ij3d.display.AddROI3DToManagerOperation
 
getId() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsNodeTypeCategory
 
getId() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.trackscheme.TrackSchemeDataDisplayOperation
 
getId() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
getId() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DAlgorithm.Operation
 
getId() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddROIToActiveJIPipeImageViewerDataDisplay
 
getId() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddROIToJIPipeImageViewerDataDisplay
 
getId() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddToROIManagerDataDisplay
 
getId() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.OpenInImageJDataDisplay
 
getId() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImportImageJPathDataOperation
 
getId() - Method in enum org.hkijena.jipipe.extensions.omnipose.OmniposeModel
 
getId() - Method in enum org.hkijena.jipipe.extensions.omnipose.OmniposePretrainedModel
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterTypeInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanParameterTypeInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanPrimitiveParameterTypeInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ByteParameterTypeInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BytePrimitiveParameterTypeInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.DoubleParameterTypeInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.DoublePrimitiveParameterTypeInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.FloatParameterTypeInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.FloatPrimitiveParameterTypeInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.IntParameterTypeInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.IntPrimitiveParameterTypeInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.LongParameterTypeInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.LongPrimitiveParameterTypeInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ShortParameterTypeInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ShortPrimitiveParameterTypeInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExporterRef
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImporterRef
 
getId() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRef
 
getId() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2AlgorithmInfo
 
getId() - Method in class org.hkijena.jipipe.extensions.plots.ui.resultanalysis.OpenPlotInJIPipeDataOperation
 
getId() - Method in class org.hkijena.jipipe.extensions.tables.display.CacheAwareOpenResultsTableInJIPipeDataOperation
 
getId() - Method in class org.hkijena.jipipe.extensions.tables.display.OpenResultsTableInImageJDataOperation
 
getId() - Method in class org.hkijena.jipipe.extensions.tables.display.OpenResultsTableInJIPipeTabDataOperation
 
getId() - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnConversionParameter
The ID of the selected entry
getId() - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnIntegrationParameter
The ID of the selected entry
getId() - Method in class org.hkijena.jipipe.extensions.utils.display.ImportJIPipeProjectDataOperation
 
getId() - Method in class org.hkijena.jipipe.JIPipeService.DatatypeRegisteredEvent
 
getId() - Method in class org.hkijena.jipipe.ui.components.AddParameterDialog.Settings
 
getId() - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Band
 
getId() - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Task
 
getId() - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderPackage
 
getIdAnnotation() - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm
 
getIdAnnotation() - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm
 
getIdAnnotation() - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm
 
getIdAnnotation() - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROImageAlgorithm
 
getIdOf(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Gets the ID of the data type
getIdOf(ImageJDataImporter) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry
 
getIdOf(ImageJDataExporter) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry
 
getIgnoredAnnotationColumns() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm
Returns annotation types that should be ignored by the internal logic.
getIgnoredAnnotationColumns() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm
Returns annotation types that should be ignored by the internal logic.
getIgnoredAnnotationColumns() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.CreateStackAlgorithm
 
getImage() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData
 
getImage() - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageData
 
getImage() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
getImage() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.ModelData
 
getImage() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
The ImageJ image
getImage() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.OMEImageData
 
getImage() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImagePlusResultImportRun
 
getImage() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.OMEImageResultImportRun
 
getImage() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
getImage() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
getImage() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
getImage() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
getImage(int) - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
getImage(ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
getImage(int, int, int) - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
getImage(long, long) - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROGateway
Gets a dataset
getImage() - Method in class org.hkijena.jipipe.extensions.parameters.library.images.ImageParameter
 
getImage() - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Returns the image to render.
getImage3DRendererSettings() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
getImageArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm
 
getImageArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
getImageData() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D.ImageLoaderRun
 
getImageFile() - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail
 
getImageFilters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ImagePlusFromGUI
 
getImageFiltersOperation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ImagePlusFromGUI
 
getImageFromClipboard(int) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils
Get an image off the system clipboard.
getImageHeightAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
getImageHeightAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
getImageHeightAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm
 
getImageId() - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROImageReferenceData
 
getImageIds() - Method in class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROImageReferenceDataSource
 
getImageImportParameters() - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROImageAlgorithm
 
getImageJAdapters() - Static method in class org.hkijena.jipipe.JIPipe
 
getImageJDataAdapterRegistry() - Method in class org.hkijena.jipipe.JIPipe
 
getImageJDataAdapterRegistry() - Method in interface org.hkijena.jipipe.JIPipeService
 
getImageJPlugins() - Method in class org.hkijena.jipipe.JIPipe
 
getImageJUpdaterRoot() - Static method in class org.hkijena.jipipe.utils.CoreImageJUtils
 
getImageJUpdateSiteDependencies() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJPlugin
 
getImageJUpdateSiteDependencies() - Method in class org.hkijena.jipipe.extensions.forms.FormsPlugin
 
getImageJUpdateSiteDependencies() - Method in class org.hkijena.jipipe.extensions.ij3d.IJ3DPlugin
 
getImageJUpdateSiteDependencies() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingPlugin
 
getImageJUpdateSiteDependencies() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2Plugin
 
getImageJUpdateSiteDependencies() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.ImageJAlgorithmsPlugin
 
getImageJUpdateSiteDependencies() - Method in interface org.hkijena.jipipe.JIPipeDependency
List of ImageJ update sites that are dependencies
getImageJUpdateSiteDependencies() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
 
getImageJUpdateSiteDependencies() - Method in class org.hkijena.jipipe.JIPipeMutableDependency
 
getImageJUpdateSites() - Method in interface org.hkijena.jipipe.JIPipeDependency
List of ImageJ update sites that provide the dependency
getImageJUpdateSites() - Method in class org.hkijena.jipipe.JIPipeMutableDependency
 
getImageOrExpand(ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
getImageOrExpand(int, int, int) - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
getImageParameters() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode
 
getImageParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
getImagePlus() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.InputEntry
 
getImagePlus() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelledImage
 
getImagePlus() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedImagePlusDataViewerWindow.CustomDataLoader
 
getImagePlus() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
getImagePlus() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
getImagePlus() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
getImageProcessorType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
Returns the appropriate ImageProcessor that stores the pixel data.
getImageProperties(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Returns the persistent properties of a ImagePlus as map
getImages() - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
getImageTitle() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.ChangeImageMetadataFromExpressionsAlgorithm
 
getImageTypeAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
getImageURL() - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Return a URL for the image source, or null if it could not be determined.
getImageViewer() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
getImageViewer() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
getImageViewer() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerCacheDataViewerWindow
 
getImageViewerPanel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.MaskDrawerFormData
 
getImageViewerPanel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.ROIDrawerFormData
 
getImageViewerPanel() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerLUTEditor
 
getImageViewerPanel() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerOpacityLUTEditor
 
getImageViewerPanel2D() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
getImageViewerPanel3D() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
getImageWidthAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
getImageWidthAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
getImageWidthAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm
 
getImportDelay() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.MacroWrapperAlgorithm
 
getImportedImageJDataType() - Method in class org.hkijena.jipipe.api.compat.DataTableImageJDataImporter
 
getImportedImageJDataType() - Method in class org.hkijena.jipipe.api.compat.EmptyImageJDataImporter
 
getImportedImageJDataType() - Method in interface org.hkijena.jipipe.api.compat.ImageJDataImporter
 
getImportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.cellpose.compat.CellposeModelImageJImporter
 
getImportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.cellpose.compat.CellposeSizeModelImageJImporter
 
getImportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.clij2.compat.CLIJ2DataFromImageWindowImageJImporter
 
getImportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.filesystem.compat.PathDataFromTableImageJImporter
 
getImportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.ij3d.compat.ROI3DImageJImporter
 
getImportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.compat.IJ2DataFromImageWindowImageJImporter
 
getImportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ImagePlusDataFromImageWindowImageJImporter
 
getImportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.OMEImageFromImageWindowImageJImporter
 
getImportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.RoiManagerImageJImporter
 
getImportedImageJDataType() - Method in class org.hkijena.jipipe.extensions.tables.compat.ResultsTableDataImageJImporter
 
getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.api.compat.DataTableImageJDataImporter
 
getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.api.compat.EmptyImageJDataImporter
 
getImportedJIPipeDataType() - Method in interface org.hkijena.jipipe.api.compat.ImageJDataImporter
 
getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.cellpose.compat.CellposeModelImageJImporter
 
getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.cellpose.compat.CellposeSizeModelImageJImporter
 
getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.clij2.compat.CLIJ2DataFromImageWindowImageJImporter
 
getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.filesystem.compat.PathDataFromTableImageJImporter
 
getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.ij3d.compat.ROI3DImageJImporter
 
getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.compat.IJ2DataFromImageWindowImageJImporter
 
getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ImagePlusDataFromImageWindowImageJImporter
 
getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.OMEImageFromImageWindowImageJImporter
 
getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.RoiManagerImageJImporter
 
getImportedJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.tables.compat.ResultsTableDataImageJImporter
 
getImporter() - Method in class org.hkijena.jipipe.api.compat.ImageJDataImporterUI
 
getImporter() - Method in class org.hkijena.jipipe.api.compat.ImageJDataImportOperation
 
getImporterById(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry
 
getImporterId() - Method in class org.hkijena.jipipe.api.compat.ImageJDataImportOperation
 
getImporterType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.RunImageJImporterAlgorithm
 
getImportParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.RunImageJImporterAlgorithm
 
getImprovedStrokeBackgroundColor() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getInactiveControlTextColor() - Method in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
Returns the inactive control text color.
getInactiveControlTextColor() - Method in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
Returns the inactive control text color.
getInbox() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
getInbox() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.DismissedEvent
 
getInbox() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.PushedEvent
 
getInbox() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.UpdatedEvent
 
getIncludeReflectionParameters() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
 
getIncludeReflectionParameters() - Method in class org.hkijena.jipipe.api.grouping.JsonAlgorithm
 
getIncludeReflectionParameters() - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
getIncludeReflectionParameters() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeCustomParameterCollection
If true, also include parameters discovered via reflection.
getIncrements() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData
 
getIndent() - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.PrettifyXMLAlgorithm
 
getIndex() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadataRow
 
getIndex() - Method in class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceParameter
 
getIndex() - Method in enum org.hkijena.jipipe.extensions.ijmultitemplatematching.TemplateMatchingMethod
 
getIndexAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm
 
getIndexAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm
 
getIndexColumn() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.ExtractROI3DMetadataAlgorithm
 
getIndexColumn() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.ExtractROIMetadataAlgorithm
 
getIndexIncrement() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
getIndicesC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm
 
getIndicesT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm
 
getIndicesZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm
 
getInfo() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
 
getInfo() - Method in class org.hkijena.jipipe.api.environments.JIPipeEnvironment
Returns more detailed information (e.g., the executed script environment path).
getInfo() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the JIPipeNodeInfo that describes this algorithm
getInfo() - Method in class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment
 
getInfo() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRef
 
getInfo() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeNodeInfoRef
 
getInfo() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeParameterTypeInfoRef
 
getInfo() - Method in class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
getInfo() - Method in class org.hkijena.jipipe.extensions.python.PythonEnvironment
 
getInfo() - Method in class org.hkijena.jipipe.extensions.python.PythonPackageLibraryEnvironment
 
getInfo() - Method in class org.hkijena.jipipe.extensions.r.REnvironment
 
getInfo() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.NodeInfoDeselectedEvent
 
getInfo() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.NodeInfoSelectedEvent
 
getInfo() - Method in class org.hkijena.jipipe.ui.extensionbuilder.JsonNodeInfoUI
 
getInfoByFieldClass(Class<?>) - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry
Return a parameter type by its field class
getInfoById(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Gets a matching info by Id
getInfoById(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry
Returns a parameter type info by ID
getInitialDirectory() - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
getInput() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter
 
getInputAnnotation() - Method in class org.hkijena.jipipe.extensions.forms.utils.SingleAnnotationIOSettings
 
getInputAnnotationByFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
getInputAnnotationColumnIntersection(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
getInputAnnotationColumnUnion(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
getInputClass() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter
 
getInputColumn() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
getInputColumns() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2Algorithm
 
getInputColumns() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTablesAlgorithm
Deprecated.
 
getInputData(String, Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Gets stored data from an input slot
getInputData(JIPipeDataSlot, Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Gets stored data from an input slot
getInputData(String, Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Gets stored data from an input slot
getInputData(JIPipeDataSlot, Class<T>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Gets stored data from an input slot
getInputDataStore(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Gets stored data from an input slot
getInputDataStore(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Gets stored data from an input slot
getInputIncomingSourceSlots(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
If exists, returns the output slots that provide data for the input slot Returns and empty list if there are none
getInputModuleIO() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
getInputRow(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Returns the row of the data in the original data slot
getInputRow(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Returns the row of the data in the original data slot
getInputRows(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Returns the row indices that belong to this data interface
getInputRows(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Returns the row indices that belong to this data interface
getInputSlot(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the input slot with the specified name.
getInputSlotImporters() - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration
 
getInputSlotMap() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Gets all input slot instances
getInputSlotMap() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
getInputSlotName(ModuleItem<?>) - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
getInputSlotNames() - Method in interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationStep
Gets the names of all input slots that are referenced
getInputSlotNames() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
 
getInputSlotNames() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
 
getInputSlotOrder() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
getInputSlotOrder() - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration
 
getInputSlotOrder() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Gets the input slot order
getInputSlotRowIndices(String) - Method in interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationStep
Returns the referenced indices of given input slot name
getInputSlotRowIndices(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
 
getInputSlotRowIndices(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
 
getInputSlotRows() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Raw access to all data stored in the batch
getInputSlotRows() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Raw access to all data stored in the batch
getInputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
getInputSlots() - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration
 
getInputSlots() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
getInputSlots() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry
 
getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo
 
getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
getInputSlots() - Method in interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationStep
Gets the input slots that are referenced
getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
 
getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
 
getInputSlots() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns all input slots ordered by the slot order
getInputSlots() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
Returns general input data.
getInputSlots() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
getInputSlots() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo
 
getInputSlots() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo
 
getInputSlots() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
getInputSlots() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2AlgorithmInfo
 
getInputSlotsWithRole(JIPipeDataSlotRole) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Gets all input slots that have the specified role
getInputSlotToArgIndexMap() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
getInputsString() - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration
 
getInputStream() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree
 
getInputToImageJExporters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.MacroWrapperAlgorithm
 
getInputType() - Method in interface org.hkijena.jipipe.api.data.JIPipeDataConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ImplicitResultsTableDataConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageToImagePlusDataConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.ImagePlusDataToCLIJImageDataConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImplicitPathTypeConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.FilamentsToRoi3dDataTypeConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.FilamentsToRoiDataTypeConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.SpotsToRoiConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.imagej2.converters.ImageJ1ToImageJ2Converter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.imagej2.converters.ImageJ2ToImageJ1Converter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePlusToOMEImageTypeConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImageToLUTTypeConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImplicitImageTypeConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.LUTToImageTypeConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.OMEImageToImagePlusTypeConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.OmeImageToOMEXMLTypeConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.OMEImageToROITypeConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.PlotToImageTypeConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImageJImageToImpImageDataTypeConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageToImageJImageDataTypeConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.multiparameters.converters.ParametersDataToResultsTableDataConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.plots.converters.PlotToTableConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.strings.StringDataConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.tables.DoubleArrayColumnToTableConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.tables.StringArrayColumnToTableConverter
 
getInputType() - Method in class org.hkijena.jipipe.extensions.utils.datatypes.PathDataToJIPipeOutputConverter
 
getInsertedObject() - Method in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderInserterUI
 
getInserterParameterEditorUIList() - Method in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderInserterUI
 
getInsets() - Method in class org.hkijena.jipipe.ui.components.icons.OverlayColorIcon
 
getInsets() - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Action
 
getInsideArea(Rectangle, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
Generates the rectangle defined by the definition.
getInstallationPath() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller.Configuration
 
getInstallationPath() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller.Configuration
 
getInstallationPath() - Method in class org.hkijena.jipipe.extensions.r.installers.REnvInstaller.Configuration
 
getInstallDir() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
getInstalledEnvironment() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstaller
 
getInstalledEnvironment() - Method in class org.hkijena.jipipe.api.environments.ExternalEnvironmentInstaller
Returns the final environment after installation
getInstalledEnvironment() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
 
getInstalledEnvironment() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller
 
getInstalledEnvironment() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectCondaEnvPythonInstaller
 
getInstalledEnvironment() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectSystemPythonInstaller
 
getInstalledEnvironment() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectVirtualEnvPythonInstaller
 
getInstalledEnvironment() - Method in class org.hkijena.jipipe.extensions.r.installers.REnvInstaller
 
getInstallerClass() - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry.InstallerEntry
 
getInstallers(Class<? extends JIPipeEnvironment>) - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry
Returns a sorted list of installer items for the environment
getInstance(Class<? extends JIPipeData>) - Static method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
Returns an instance for the data class.
getInstance(String) - Static method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
Returns an instance for the data type ID.
getInstance() - Static method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue
 
getInstance() - Static method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase
 
getInstance() - Static method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.cellpose.CellposeSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.clij2.CLIJSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.filesystem.FilesystemExtensionSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ImageViewerUIROI3DDisplaySettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.ijfilaments.settings.ImageViewerUIFilamentDisplaySettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.settings.ImageViewerUISpotsDisplaySettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.settings.ImageViewerUITracksDisplaySettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.ilastik.IlastikSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.settings.ImageViewerUIROI2DDisplaySettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer2DUISettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer3DUISettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewerGeneralUISettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.omero.OMEROSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.omnipose.OmniposeSettings
 
getInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExporterRef
 
getInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
getInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImporterRef
 
getInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRef
 
getInstance(JIPipeWorkbench, Component, JIPipeParameterAccess, ParameterTable) - Static method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableEditorWindow
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.processes.ProcessesExtensionSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.python.adapter.PythonAdapterExtensionSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.python.PythonExtensionSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.r.RExtensionSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.settings.BackupSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.settings.DataExporterSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.settings.DefaultCacheDisplaySettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.settings.DefaultResultImporterSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.settings.DownloadSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.settings.ExtensionSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.settings.HistoryJournalSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.settings.NodeTemplateSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.settings.NotificationUISettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.settings.ProjectsSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.settings.RuntimeSettings
 
getInstance() - Static method in class org.hkijena.jipipe.extensions.settings.TableViewerUISettings
 
getInstance() - Static method in class org.hkijena.jipipe.JIPipe
 
getInstance() - Method in class org.hkijena.jipipe.JIPipeJavaExtensionInitializationInfo
 
getInstance() - Static method in class org.hkijena.jipipe.ui.components.SplashScreen
 
getInstance(JIPipeGraph) - Static method in class org.hkijena.jipipe.ui.grapheditor.NodeHotKeyStorage
 
getInstance() - Static method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection
 
getInstance() - Static method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
 
getInstanceClass() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
getInstanceClass() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo
 
getInstanceClass() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
getInstanceClass() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
The algorithm class that is generated
getInstanceClass() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
getInstanceClass() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo
 
getInstanceClass() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo
 
getInstanceClass() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
getInstanceClass() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2AlgorithmInfo
 
getInstanceFromRaw() - Static method in class org.hkijena.jipipe.extensions.settings.ExtensionSettings
Gets an instance from the raw properties file.
getInstanceGenerator() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
 
getIntegerByDialog(Component, String, String, int, int, int) - Static method in class org.hkijena.jipipe.utils.UIUtils
Gets an integer by dialog
getIntegers(int, int, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRange
Generates the list of integers based on the value
getIntegersFromRangeString(String) - Static method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRange
Converts a range string of format [range];[range];... to a list of integers
getIntegrationFunction() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator
 
getIntegrationFunction() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm
 
getIntegrationFunctionBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator
 
getIntegrationFunctionBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator
 
getIntegrationFunctionForeground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator
 
getIntegrationFunctionForeground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator
 
getIntermediateAlgorithms() - Method in class org.hkijena.jipipe.api.JIPipeProject
Returns all nodes that have at least one connected algorithm that uses its generated data.
getInternalGradientRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
getInternalPath() - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeDataStorage
The current path relative to the root storage
getInternalPath() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage
 
getInternalPath() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage
 
getInternalPath() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage
 
getInternalPath() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPWriteDataStorage
 
getInternalPath() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableArchive
 
getInternalStoragePath() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the internal storage path relative to the output folder.
getInterpolationMethod() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
 
getInterpolationMethod() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm
 
getInterpolationMethod() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.ImageParameters
 
getInterruptedEventEmitter() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
 
getInterruptedEventEmitter() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunWorker
 
getInvertedMode() - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI.TrackRenderer
 
getIoInputSlots() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
getIoMode() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
getIoMode() - Method in class org.hkijena.jipipe.ui.components.PathEditor
 
getItemComparator() - Method in class org.hkijena.jipipe.ui.components.pickers.PickerDialog
 
GetItemFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
GetItemFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.GetItemFunction
 
getItemListRenderer() - Method in class org.hkijena.jipipe.ui.documentation.JIPipeAlgorithmCompendiumUI
 
getItemListRenderer() - Method in class org.hkijena.jipipe.ui.documentation.JIPipeCompendiumUI
Returns the renderer for the items
getItemListRenderer() - Method in class org.hkijena.jipipe.ui.documentation.JIPipeDataTypeCompendiumUI
 
getItemMargin() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Returns the item margin.
GetItemOrDefaultFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
GetItemOrDefaultFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.GetItemOrDefaultFunction
 
getItems() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.EnumFormData
 
getIterationMode() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
getIterationMode() - Method in class org.hkijena.jipipe.api.grouping.JsonAlgorithm
 
getIterationMode() - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
getIterationMode() - Method in class org.hkijena.jipipe.api.looping.LoopStartNode
Deprecated.
 
getIterationMode() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
getIterations() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ErodeEndVerticesAlgorithm
 
getIterations() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm
 
getIterations() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.RemoveLargestRegionAlgorithm
 
getIterations() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.RemoveLargestLabelAlgorithm
 
getIterations() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm
 
getIterationStepIndexAnnotation() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm
 
getIterationStepIndexAnnotation() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm
 
getJaccardIndexAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm
 
getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
 
getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry
 
getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry
 
getJiPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeGraphEditorToolRegistry
 
getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry
 
getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
 
getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry
 
getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry
 
getJIPipe() - Method in class org.hkijena.jipipe.api.registries.JIPipeUtilityRegistry
 
getJIPipe() - Method in class org.hkijena.jipipe.ui.components.SplashScreen
 
getJIPipe() - Method in class org.hkijena.jipipe.ui.registries.JIPipeCustomMenuRegistry
 
getJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.DatasetImageJ2ModuleInput
 
getJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.DataSlotModuleInput
 
getJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.ImagePlusImageJ2ModuleInput
 
getJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.IntervalImageJ2ModuleInput
 
getJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.IterableImageJ2ModuleInput
 
getJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.OutOfBoundsFactoryImageJ2ModuleInput
 
getJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.RandomAccessibleImageJ2ModuleInput
 
getJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.ShapeImageJ2ModuleInput
 
getJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.DatasetImageJ2ModuleOutput
 
getJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.DataSlotModuleOutput
 
getJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.ImagePlusImageJ2ModuleOutput
 
getJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.IntervalImageJ2ModuleOutput
 
getJIPipeDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.RandomAccessibleImageJ2ModuleOutput
 
getJIPipeIcon128() - Static method in class org.hkijena.jipipe.utils.UIUtils
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.ByteArrayParameterImageJ2ModuleInput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.DoubleArrayParameterImageJ2ModuleInput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.FloatArrayParameterImageJ2ModuleInput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.IntegerArrayParameterImageJ2ModuleInput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.LongArrayParameterImageJ2ModuleInput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.ShortArrayParameterImageJ2ModuleInput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.StringArrayParameterImageJ2ModuleInput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.ParameterImageJ2ModuleInput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.BooleanParameterImageJ2ModuleInput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.ByteParameterImageJ2ModuleInput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.DoubleParameterImageJ2ModuleInput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.FloatParameterImageJ2ModuleInput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.IntegerParameterImageJ2ModuleInput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.LongParameterImageJ2ModuleInput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.ShortParameterImageJ2ModuleInput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.StringParameterImageJ2ModuleInput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.RealTypeParameterImageJ2ModuleInput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.BooleanParameterImageJ2ModuleOutput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.ByteParameterImageJ2ModuleOutput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.DoubleParameterImageJ2ModuleOutput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.FloatParameterImageJ2ModuleOutput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.IntegerParameterImageJ2ModuleOutput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.LongParameterImageJ2ModuleOutput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.ShortParameterImageJ2ModuleOutput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.StringParameterImageJ2ModuleOutput
 
getJIPipeParameterClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.RealTypeParameterImageJ2ModuleOutput
 
GetJIPipeSlotFolderAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms.meta
 
GetJIPipeSlotFolderAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm
 
GetJIPipeSlotFolderAlgorithm(GetJIPipeSlotFolderAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm
 
getJIPipeUserDir() - Static method in class org.hkijena.jipipe.JIPipe
Gets the JIPipe user-writable directory.
getJIPipeUserDir() - Static method in class org.hkijena.jipipe.utils.PathUtils
 
getJIPipeVersion() - Static method in class org.hkijena.jipipe.JIPipe
The current version of JIPipe according to the Maven-proved information
getJIPipeVersion() - Static method in class org.hkijena.jipipe.utils.VersionUtils
The current version of JIPipe according to the Maven-proved information
getJpegQuality() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImage2Algorithm
 
getJpegQuality() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
getJpegQuality() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm
 
getJpegQuality() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Video2DExporterRun
 
getJsonFilePath() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
 
getJsonNode() - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionRegistrationTask
 
getJsonPath() - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.AnnotateWithJsonDataAlgorithm.Entry
 
getJsonPath() - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.ExtractJsonDataAsTableAlgorithm.Entry
 
getJsonPath() - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.ExtractTextFromJsonAlgorithm
 
getK() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm
 
getK() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm
 
getK() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm
 
getKernelFunction() - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelIterating
 
getKernelFunction() - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelSimpleIterating
 
getKernelScript() - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelIterating
 
getKernelScript() - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelSimpleIterating
 
getKernelX() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersAlgorithm
 
getKernelY() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersAlgorithm
 
getKernelZ() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersAlgorithm
 
getKey() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess
 
getKey() - Method in class org.hkijena.jipipe.api.JIPipeProjectDirectories.DirectoryEntry
 
getKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
 
getKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess
 
getKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
getKey() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Returns the unique ID of this parameter
getKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterChangedEvent
 
getKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
getKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
getKey() - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionParameterVariableInfo
 
getKey() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.ProjectUserFolderDataSource
 
getKey() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm.MetadataProperty
 
getKey() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column
 
getKey() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column
 
getKey() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterItemParameterAccess
 
getKey() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterInputAccess
 
getKey() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterOutputAccess
 
getKey() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterParameterAccess
 
getKey() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
 
getKey() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameter
 
getKey() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterKeyAccess
 
getKey() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterValueAccess
 
getKey() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ParameterColumn
 
getKey() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableCellAccess
 
getKey() - Method in class org.hkijena.jipipe.ui.parameters.DynamicParameterEditorDialog.ParameterEntry
 
getKey() - Method in class org.hkijena.jipipe.utils.scripting.MacroFlag
 
getKey() - Method in class org.hkijena.jipipe.utils.scripting.MacroSetting
 
getKeyBinding() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
getKeyBinding() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool
 
getKeyBinding() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
getKeyBinding() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool
 
getKeyBinding() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
getKeyBinding() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
getKeyBinding() - Method in class org.hkijena.jipipe.extensions.graphannotation.tools.ArrowAnnotationGraphNodeTool
 
getKeyBinding() - Method in class org.hkijena.jipipe.extensions.graphannotation.tools.GroupBoxAnnotationGraphNodeTool
 
getKeyBinding() - Method in class org.hkijena.jipipe.extensions.graphannotation.tools.ImageBoxAnnotationGraphNodeTool
 
getKeyBinding() - Method in class org.hkijena.jipipe.extensions.graphannotation.tools.TextBoxAnnotationGraphNodeTool
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphCopyNodeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphCutNodeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphDuplicateNodeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphPasteNodeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentCopyNodeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentCutNodeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentPasteNodeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddNewNodeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DeleteCompartmentUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DeleteNodeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableNodeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisablePassThroughNodeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableNodeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnablePassThroughNodeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.IsolateNodesUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.LockNodeLocationSizeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.LowerUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIDownContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUILeftContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIRightContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIUpContextAction
 
getKeyboardShortcut() - Method in interface org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeUIContextAction
Returns an optional keyboard shortcut.
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RaiseUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RunAndShowResultsNodeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SelectAllNodeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SelectAndMoveNodeHereNodeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SendToBackgroundUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SendToForegroundUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UnlockNodeLocationSizeUIContextAction
 
getKeyboardShortcut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheNodeUIContextAction
 
getKeyClass() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameter
 
getKeyColumn() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm
 
getKeyColumnName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator
 
getKeyColumnName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
getKeyValuePairExporter() - Method in class org.hkijena.jipipe.extensions.omero.nodes.manage.OMEROCreateDatasetAlgorithm
 
getKeyValuePairExporter() - Method in class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROImageAlgorithm
 
getKeyValuePairKey() - Method in class org.hkijena.jipipe.extensions.omero.parameters.AnnotationsToOMEROKeyValuePairExporter
 
getKeyValuePairs(MetadataFacility, SecurityContext, DataObject) - Static method in class org.hkijena.jipipe.extensions.omero.util.OMEROUtils
 
getKeyValuePairToAnnotationImporter() - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm
 
getKeyValuePairToAnnotationImporter() - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm
 
getKeyValuePairToAnnotationImporter() - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm
 
getKeyValuePairToAnnotationImporter() - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROImageAlgorithm
 
getKeyValuePairToAnnotationImporter() - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROTableAlgorithm
 
getKeyValuePairValue() - Method in class org.hkijena.jipipe.extensions.omero.parameters.AnnotationsToOMEROKeyValuePairExporter
 
getKnownExtensionById(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
Returns a known extension by ID If multiple extensions share the same ID, only one is returned If there is none, null will be returned
getKnownExtensionsById() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
getKnownExtensionsList() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
getKnownNonAlphanumericOperatorTokens() - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
getKnownTags(SecurityContext) - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROGateway
 
getLabel(Object) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm.IterationModeEnumInfo
 
getLabel(Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeColumnMatchingEnumInfo
 
getLabel() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction
 
getLabel(Object) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelColorMapEnumItemInfo
 
getLabel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm.ROINameToLabelEntry
 
getLabel(Object) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.BitDepthEnumItemInfo
 
getLabel() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.Measurement
 
getLabel(Object) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.OptionalBitDepthEnumItemInfo
 
getLabel(Object) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DefaultEnumItemInfo
 
getLabel(Object) - Method in interface org.hkijena.jipipe.extensions.parameters.api.enums.EnumItemInfo
Extracts a custom label for the enum value
getLabel(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.colors.ColorMapEnumItemInfo
 
getLabel(Object) - Method in class org.hkijena.jipipe.extensions.plots.utils.ColorMapEnumItemInfo
 
getLabel(Object) - Method in class org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm.DatasetEnumItemInfo
 
getLabel() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.DoubleArrayTableColumn
 
getLabel() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.FloatArrayTableColumn
 
getLabel() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RelabeledTableColumn
 
getLabel() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RowIndexTableColumn
 
getLabel() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.StringArrayTableColumn
 
getLabel() - Method in interface org.hkijena.jipipe.extensions.tables.datatypes.TableColumn
Label of this column
getLabel() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ZeroTableColumn
 
getLabel() - Method in class org.hkijena.jipipe.extensions.tables.TableColumnReference
 
getLabel() - Method in class org.hkijena.jipipe.ui.components.FormPanel.FormPanelEntry
 
getLabel() - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Band
 
getLabel() - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Task
 
getLabelAssignment() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm
 
getLabelBackground() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.DrawerLabelSettings
 
getLabelBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
getLabelBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
getLabelBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelParameters
 
getLabelBackground() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
GetLabelBoundariesAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
GetLabelBoundariesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.GetLabelBoundariesAlgorithm
 
GetLabelBoundariesAlgorithm(GetLabelBoundariesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.GetLabelBoundariesAlgorithm
 
getLabelDataAnnotation() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
getLabelDataAnnotation() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
getLabelDataAnnotation() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingLabels2DAlgorithm2
 
getLabelDataAnnotation() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingMask2DAlgorithm2
 
getLabelDataAnnotation() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
getLabelExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
getLabelFontFamily() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
getLabelFontFamily() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelParameters
 
getLabelFontFamily() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
getLabelFontSize() - Method in class org.hkijena.jipipe.extensions.pipelinerender.RenderPipelineRunSettings
 
getLabelFontSize() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.Pie2DPlotData
 
getLabelFontSize() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.Pie3DPlotData
 
getLabelForeground() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.DrawerLabelSettings
 
getLabelForeground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
getLabelForeground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
getLabelForeground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelParameters
 
getLabelForeground() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
getLabelGenerator() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
getLabelIdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.CropLabelsAlgorithm
 
getLabelIdLimit() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.CropLabelsAlgorithm
 
getLabelIndexAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.SeparateLabelsAlgorithm
 
getLabelLocation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelParameters
 
getLabelMask(ImageProcessor, int) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.ImageJAlgorithmUtils
 
getLabelNameExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm
 
getLabelParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
getLabels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelledImage
 
getLabels1Settings() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm
 
getLabels2Settings() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm
 
getLabelSettings() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer
 
getLabelSize() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.DrawerLabelSettings
 
getLabelSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
getLabelSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
getLabelSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelParameters
 
getLabelSize() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
getLanguage() - Method in class org.hkijena.jipipe.extensions.clij2.parameters.OpenCLKernelScript
 
getLanguage() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameter
The language info.
getLanguage() - Method in class org.hkijena.jipipe.extensions.parameters.library.scripts.ImageJMacro
 
getLanguage() - Method in class org.hkijena.jipipe.extensions.parameters.library.scripts.PythonScript
 
getLanguage() - Method in class org.hkijena.jipipe.extensions.r.parameters.RScriptParameter
 
getLanguageName() - Method in class org.hkijena.jipipe.extensions.clij2.parameters.OpenCLKernelScript
 
getLanguageName() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameter
Returns the human-readable name of the language
getLanguageName() - Method in class org.hkijena.jipipe.extensions.parameters.library.scripts.ImageJMacro
 
getLanguageName() - Method in class org.hkijena.jipipe.extensions.parameters.library.scripts.PythonScript
 
getLanguageName() - Method in class org.hkijena.jipipe.extensions.r.parameters.RScriptParameter
 
getLargerMajor() - Method in class org.hkijena.jipipe.ui.grapheditor.general.connections.RectangularLine
 
getLargerMinor() - Method in class org.hkijena.jipipe.ui.grapheditor.general.connections.RectangularLine
 
getLastDataDirectory() - Method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
 
getLastDateTimeInfo() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupSessionInfo
 
getLastDirectoryBy(FileChooserSettings.LastDirectoryKey) - Method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
Gets the last directory by key
getLastExternalDirectory() - Method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
 
getLastFillRect() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
getLastIndex() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
getLastInputSlot() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the last input slot according to the slot order.
GetLastIntegratingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.integrating
Implements calculating the sum
GetLastIntegratingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.integrating.GetLastIntegratingColumnOperation
 
GetLastItemFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
GetLastItemFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.GetLastItemFunction
 
getLastModifiedTime() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotateWithPathProperties
 
getLastMousePosition() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getLastName() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
getLastOutputSlot() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the last output slot according to the slot order.
getLastParametersDirectory() - Method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
 
getLastProjectsDirectory() - Method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
 
getLatestDownload() - Static method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
Gets the latest download link for Miniconda
getLatestDownload() - Static method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller
Gets the latest download link for Miniconda
getLatestDownload() - Static method in class org.hkijena.jipipe.extensions.r.installers.REnvInstaller
Gets the latest download link for Miniconda
getLatestPy37Download() - Static method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
Gets the latest download link for Miniconda
getLayers() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.BlendImagesAlgorithm
 
getLearningRate() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
getLearningRate() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeTrainingTweaksSettings
 
getLearningRate() - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeTrainingTweaksSettings
 
getLeft() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
 
getLeft() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.InnerMargin
 
getLeft() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
getLegendFontSize() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
getLegendItem(int, int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Returns a legend item for a series.
getLevel() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry
 
getLibraryDirectory() - Method in class org.hkijena.jipipe.extensions.python.PythonPackageLibraryEnvironment
 
getLicense() - Method in class org.hkijena.jipipe.api.JIPipeMetadata
 
getLicense() - Method in class org.hkijena.jipipe.extensions.JIPipePrepackagedDefaultJavaPlugin
 
getLicense() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
 
getLightnessThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
getLimit() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
getLimit() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
getLimit() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
getLimit() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings
 
getLimit() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm.IterationStepGenerationSettings
 
getLimit() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithmIterationStepGenerationSettings
 
getLimit() - Method in class org.hkijena.jipipe.extensions.tables.nodes.filter.SliceTableRowsAlgorithm
 
getLimit() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SelectDataTableRowsAlgorithm
 
getLimitConnections() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
getLineColor() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode
 
getLineColor() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertTracksToRoiNode
 
getLineColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.ROIProperties
 
getLineColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
getLineColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
getLineColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
getLineColor() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
getLineColorAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
getLineCommentStartAndEnd(int) - Method in class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
 
getLineDimension() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData
 
getLineLength() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm
 
getLineMeasurement() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm
 
getLines(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines
 
getLines(int, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines
Once points have been added in some way this method extracts the lines and returns them as a Vector of HoughLine objects, which can be used to draw on the
getLineSize() - Method in class org.hkijena.jipipe.utils.ui.RoundedLineBorder
 
getLineThickness() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ArrowAnnotationGraphNode
 
getLineThickness() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm
 
getLineThickness() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm
 
getLineThickness() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.LineCategoryPlotData
 
getLineThickness() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.LineStatisticalCategoryPlotData
 
getLineThickness() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.LineXYPlotData
 
getLineWidth() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode
 
getLineWidth() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertTracksToRoiNode
 
getLineWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.ROIProperties
 
getLineWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
getLineWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
getLineWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
getLineWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
getLineWidth() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
getLineWidthAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
getListCellRendererComponent(JList<? extends JIPipeExpressionRegistry.ExpressionFunctionEntry>, JIPipeExpressionRegistry.ExpressionFunctionEntry, int, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.expressions.FunctionSelectorList.ExpressionFunctionRenderer
 
getListCellRendererComponent(JList<? extends ExpressionOperatorEntry>, ExpressionOperatorEntry, int, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.expressions.OperatorSelectorList.ExpressionOperatorRenderer
 
getListCellRendererComponent(JList<?>, Object, int, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderUI.EntryRenderer
 
getListCellRendererComponent(JList<? extends JIPipeExpressionParameterVariableInfo>, JIPipeExpressionParameterVariableInfo, int, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.expressions.VariableSelectorList.ExpressionVariableRenderer
 
getListCellRendererComponent(JList<? extends ROI3D>, ROI3D, int, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROI3DListCellRenderer
 
getListCellRendererComponent(JList<? extends Filaments3DData>, Filaments3DData, int, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentListCellRenderer
 
getListCellRendererComponent(JList<? extends Spot>, Spot, int, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotListCellRenderer
 
getListCellRendererComponent(JList<? extends Integer>, Integer, int, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TrackListCellRenderer
 
getListCellRendererComponent(JList<? extends Roi>, Roi, int, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.RoiListCellRenderer
 
getListCellRendererComponent(JList<? extends JIPipeNodeExample>, JIPipeNodeExample, int, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.nodeexamples.JIPipeNodeExampleListCellRenderer
 
getListCellRendererComponent(JList<? extends JIPipeNodeTemplate>, JIPipeNodeTemplate, int, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.nodetemplate.JIPipeNodeTemplateListCellRenderer
 
getListCellRendererComponent(JList<? extends T>, T, int, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicEnumParameterEditorUI.Renderer
 
getListCellRendererComponent(JList<?>, Object, int, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterEditorUI.Renderer
 
getListCellRendererComponent(JList<? extends Boolean>, Boolean, int, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanParameterEditorUI.BooleanComboBoxItemRenderer
 
getListCellRendererComponent(JList<? extends JIPipeGraphNode>, JIPipeGraphNode, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.bookmarks.BookmarkedNodeListCellRenderer
 
getListCellRendererComponent(JList<? extends JIPipeDataSlot>, JIPipeDataSlot, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.cache.renderers.CachedOutputDataSlotListCellRenderer
 
getListCellRendererComponent(JList<? extends JIPipeDataInfo>, JIPipeDataInfo, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.Renderer
 
getListCellRendererComponent(JList<? extends JIPipeNodeInfo>, JIPipeNodeInfo, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.Renderer
 
getListCellRendererComponent(JList<? extends Path>, Path, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.RecentProjectListCellRenderer
 
getListCellRendererComponent(JList<? extends T>, T, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.renderers.ComponentListCellRenderer
 
getListCellRendererComponent(JList<? extends ImageJDataExporter>, ImageJDataExporter, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.renderers.ImageJDataExporterListCellRenderer
 
getListCellRendererComponent(JList<? extends ImageJDataImporter>, ImageJDataImporter, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.renderers.ImageJDataImporterListCellRenderer
 
getListCellRendererComponent(JList<? extends String>, String, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.renderers.InheritedSlotListCellRenderer
 
getListCellRendererComponent(JList<? extends JIPipeGraphNode>, JIPipeGraphNode, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.renderers.JIPipeAlgorithmListCellRenderer
 
getListCellRendererComponent(JList<? extends JIPipeDataInfo>, JIPipeDataInfo, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.renderers.JIPipeDataInfoListCellRenderer
 
getListCellRendererComponent(JList<? extends JIPipeDataInfoRef>, JIPipeDataInfoRef, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.renderers.JIPipeDataInfoRefListCellRenderer
 
getListCellRendererComponent(JList<? extends Map.Entry<JIPipeDataInfo, JIPipeDataInfo>>, Map.Entry<JIPipeDataInfo, JIPipeDataInfo>, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.renderers.JIPipeInheritanceConversionListCellRenderer
 
getListCellRendererComponent(JList<? extends JIPipeNodeDatabaseEntry>, JIPipeNodeDatabaseEntry, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.renderers.JIPipeNodeDatabaseEntryListCellRenderer
 
getListCellRendererComponent(JList<? extends JIPipeNodeInfo>, JIPipeNodeInfo, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.renderers.JIPipeNodeInfoListCellRenderer
 
getListCellRendererComponent(JList<? extends Object>, Object, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.renderers.JIPipeNodeInfoOrExamplesListCellRenderer
 
getListCellRendererComponent(JList<? extends JIPipeParameterTypeInfo>, JIPipeParameterTypeInfo, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.renderers.JIPipeParameterTypeInfoListCellRenderer
 
getListCellRendererComponent(JList<? extends Path>, Path, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.renderers.PathListCellRenderer
 
getListCellRendererComponent(JList<? extends String>, String, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.renderers.PrefixedIconListCellRenderer
 
getListCellRendererComponent(JList<? extends ResultsTableData>, ResultsTableData, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.renderers.ResultsTableDataListCellRenderer
 
getListCellRendererComponent(JList<? extends JIPipeProjectTemplate>, JIPipeProjectTemplate, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.renderers.TemplateProjectListCellRenderer
 
getListCellRendererComponent(JList<? extends T>, T, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.renderers.WindowListCellRenderer
 
getListCellRendererComponent(JList<? extends DocumentTabPane.DocumentTab>, DocumentTabPane.DocumentTab, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabListCellRenderer
 
getListCellRendererComponent(JList<?>, Object, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.extensionbuilder.JsonExtensionContentListCellRenderer
 
getListCellRendererComponent(JList<?>, Object, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI.NavigationRenderer
 
getListCellRendererComponent(JList<? extends JIPipeDataSlot>, JIPipeDataSlot, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.properties.JIPipeDataSlotListCellRenderer
 
getListCellRendererComponent(JList<? extends JIPipeNodeDatabaseEntry>, JIPipeNodeDatabaseEntry, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBoxListCellRenderer
 
getListCellRendererComponent(JList<? extends JIPipeNodeDatabaseEntry>, JIPipeNodeDatabaseEntry, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.nodefinder.NodeFinderDatasetListCellRenderer
 
getListCellRendererComponent(JList<? extends JIPipeHistoryJournalSnapshot>, JIPipeHistoryJournalSnapshot, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.history.JIPipeHistorySnapshotListCellRenderer
 
getListCellRendererComponent(JList<? extends DynamicParameterEditorDialog.ParameterEntry>, DynamicParameterEditorDialog.ParameterEntry, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.parameters.DynamicParameterEditorDialog.ParameterEntryListCellRenderer
 
getListCellRendererComponent(JList<? extends TableColumn>, TableColumn, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotDataSeriesColumnListCellRenderer
 
getListCellRendererComponent(JList<? extends JIPipeRunnableLogEntry>, JIPipeRunnableLogEntry, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.running.JIPipeLogViewer.LogEntryRenderer
 
getListCellRendererComponent(JList<? extends JIPipeRuntimePartition>, JIPipeRuntimePartition, int, boolean, boolean) - Method in class org.hkijena.jipipe.ui.settings.JIPipeRuntimePartitionListCellRenderer
 
getLoadingImageIcon() - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Returns the icon to use while in the process of loading the image.
getLoadsSynchronously() - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Returns true if the image should be loaded when first asked for.
getLocalBackground() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.ConstantSpotSegmentation3DAlgorithm
 
getLocalRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
getLocalWindowHeight() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression
 
getLocalWindowWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression
 
getLocation(String, String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
 
getLocation(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Returns info about the location of this data table.
getLocation(String, String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Returns info about the location of this data table.
getLocation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
getLocation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
getLocation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
getLocation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
getLocationCAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
getLocationMergingFunction() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.SmoothFilamentsAlgorithm
 
getLocations() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Gets the location map (writable) as map from compartment UUID to visual mode to location
getLocationTAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
getLocationWithin(String, String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the location within the specified compartment or null if none is set
getLocationXAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
getLocationYAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
getLocationZAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
getLog() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
getLog() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogEntry
 
getLogClearedEventEmitter() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection
 
getLogEntries() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection
 
getLogEntryAddedEventEmitter() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection
 
getLogFile() - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROToJIPipeLogger
 
getLogicalOperation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.BitwiseLogicalOperationAlgorithm
 
getLogLimit() - Method in class org.hkijena.jipipe.extensions.settings.RuntimeSettings
 
getLogo() - Method in class org.hkijena.jipipe.extensions.JIPipePrepackagedDefaultJavaPlugin
 
getLogo() - Method in interface org.hkijena.jipipe.JIPipeJavaPlugin
Deprecated.
getLogo() - Static method in class org.hkijena.jipipe.utils.UIUtils
 
getLogo400() - Static method in class org.hkijena.jipipe.utils.UIUtils
 
getLogPrepend() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
getLogs() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection.LogClearedEvent
 
getLogs() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection.LogEntryAddedEvent
 
getLogs() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection.LogUpdatedEvent
 
getLogService() - Method in class org.hkijena.jipipe.JIPipe
 
getLogUpdatedEventEmitter() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection
 
getLoopEndNodes() - Method in class org.hkijena.jipipe.api.looping.LoopGroup
 
getLoopIterationIteratingSettings() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
getLoopIterationMergingSettings() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
getLoopStartNode() - Method in class org.hkijena.jipipe.api.looping.LoopGroup
 
getLowerThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
getLowThreshold() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.HysteresisSegmentation3DAlgorithm
 
getLowThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm
 
getLUT() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerLUTEditor
 
getLUT() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerOpacityLUTEditor
 
getLutEditors() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.LUTManagerPlugin3D
 
getMacroParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.MacroWrapperAlgorithm
 
getMagnification() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SpotsToRGBNode
 
getMagnification() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TracksToRGBNode
 
getMagnification() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
getMagnification() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
getMainOperation(Class<? extends JIPipeData>) - Static method in class org.hkijena.jipipe.ui.cache.JIPipeDataTableRowUI
 
getMainOperation(Class<? extends JIPipeData>) - Static method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeDefaultResultDataSlotRowUI
 
getMaintainer() - Method in class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency
 
getManifestAttributes() - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
 
getManualOrder() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.SortTableColumnsAlgorithm
 
getMapFillColor() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ColorRoi3DByNameAlgorithm
 
getMapFillColor() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ColorRoi3DByStatisticsAlgorithm
 
getMapFillColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByNameAlgorithm
 
getMapFillColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm
 
getMapFillColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm
Deprecated.
 
getMapFillColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2
 
getMapImage() - Method in enum org.hkijena.jipipe.extensions.parameters.library.colors.ColorMap
 
GetMapKeysFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
GetMapKeysFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.GetMapKeysFunction
 
getMapLineColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByNameAlgorithm
 
getMapLineColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm
 
getMapLineColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm
Deprecated.
 
getMapLineColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2
 
GetMapValuesFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
GetMapValuesFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.GetMapValuesFunction
 
getMarginBottom() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters
 
getMarginBottom() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
getMarginBottom() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm
 
getMarginLeft() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters
 
getMarginLeft() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
getMarginLeft() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm
 
getMarginRight() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters
 
getMarginRight() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
getMarginRight() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm
 
getMarginTop() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters
 
getMarginTop() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
getMarginTop() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm
 
getMarkdown() - Method in class org.hkijena.jipipe.ui.components.markdown.MarkdownDocument
 
getMask() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ThresholdingResult
 
getMask(JIPipeSingleIterationStep, ImageSliceIndex, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.MergeImagesAlgorithm
 
getMask(ImagePlus, ROIListData, ImagePlus) - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.ImageROITargetArea
Gets the appropriate mask for the current setting
getMask(JIPipeSingleIterationStep, ImageSliceIndex, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.SimpleImageAndRoiIteratingAlgorithm
 
getMask() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
getMaskChangedEventEmitter() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
getMaskColor() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
getMaskDrawerPlugin() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawer2DTool
 
getMaskedPixels_16U(ImageProcessor, ImageProcessor, TShortArrayList) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
getMaskedPixels_32F(ImageProcessor, ImageProcessor, TFloatArrayList) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
getMaskedPixels_8U(ImageProcessor, ImageProcessor, TByteArrayList) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
getMaskedPixels_Slow(ImageProcessor, ImageProcessor, List<Float>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
getMaskForSlice(int, int, boolean, boolean, int, ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Generates a mask image from pure ROI data.
getMaskFromMaskOrROI(ImageROITargetArea, JIPipeSingleIterationStep, String, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.ImageJAlgorithmUtils
 
getMaskGenerator() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
getMaskInfos() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.CustomColoc2
 
getMaskProcessorFromMaskOrROI(ImageROITargetArea, int, int, ROIListData, ImagePlus, ImageSliceIndex) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.ImageJAlgorithmUtils
 
getMaskProcessorFromMaskOrROI(ImageROITargetArea, JIPipeSingleIterationStep, ImageSliceIndex, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.ImageJAlgorithmUtils
 
getMaskThreshold() - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationThresholdSettings
 
getMatrix() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve.ConvolveByParameter2DAlgorithm
 
getMatrix() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.ImageFromMatrix2DAlgorithm
 
getMax() - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.FloatNumberRangeParameter
 
getMax() - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.IntNumberRangeParameter
 
getMax() - Method in enum org.hkijena.jipipe.utils.ImageJCalibrationMode
 
getMaxBlueThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
getMaxBlueYellowThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
getMaxBrightnessThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
getMaxCounter() - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm
 
getMaxDistance() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm
 
getMaxDistance() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm
 
getMaxDistance() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm
 
getMaxEdgeWidth() - Method in class org.hkijena.jipipe.extensions.pipelinerender.RenderPipelineRunSettings
 
getMaxEntries() - Method in class org.hkijena.jipipe.extensions.settings.HistoryJournalSettings
 
getMaxGreenRedThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
getMaxGreenThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
getMaxHueThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
getMaximumBarWidth() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Returns the maximum bar width as a percentage of the available drawing space.
getMaximumMemory() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.Image3DRendererSettings
 
getMaximumScale() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.FrangiVesselnessFeatures
 
getMaxInputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
getMaxLength() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
getMaxLightnessThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
getMaxMemory() - Method in class org.hkijena.jipipe.extensions.ilastik.IlastikSettings
 
getMaxNumber() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.NumberRangeParameterGenerator
 
getMaxNumber() - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.FloatNumberRangeParameter
 
getMaxNumber() - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.IntNumberRangeParameter
 
getMaxNumber() - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameter
 
getMaxNumCircles() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
getMaxOutputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
getMaxParticleCircularity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
getMaxParticleSize() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
getMaxParticleSize() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm
 
getMaxParticleSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
getMaxParticleSphericity() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
getMaxParticleSphericity() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm
 
getMaxProgress() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
getMaxProgress() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo.StatusUpdatedEvent
 
getMaxRadius() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.binary.Voronoi3DAlgorithm
 
getMaxRadius() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.GaussianFitSpotSegmentation3DAlgorithm
 
getMaxRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.DilateLabelsAlgorithm
 
getMaxRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
getMaxRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.FastCircularHoughSegmentation2DAlgorithm
 
getMaxRadiusInUnit(String) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
Converts the radius into units and returns the maximum value
getMaxRedThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
getMaxSaturationThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
getMaxSelectableValue() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl
 
getMaxSelectableValue() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl
 
getMaxSigma() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature2DSettings
 
getMaxSigma() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature3DSettings
 
getMaxSlope() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer
 
getMaxTableColumnSize() - Method in class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
getMaxThreads() - Method in class org.hkijena.jipipe.api.JIPipeFixedThreadPool
 
getMaxThreads() - Method in class org.hkijena.jipipe.extensions.ilastik.IlastikSettings
 
getMaxThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm
 
getMaxThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm
 
getMaxThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm
 
getMaxThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm
 
getMaxThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ThresholdByAnnotation2DAlgorithm
 
getMaxThresholdParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm
 
getMaxThresholdParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm
 
getMaxThresholdParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm
 
getMaxVolumePixels() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
getMaxVolumePixels() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm
 
getMeanColumnName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator
 
getMeanDiameter() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationModelSettings_Old
Deprecated.
 
getMeasurements() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm
 
getMeasurements() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm
 
getMeasurements() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DStatisticsAlgorithm
 
getMeasurements() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
getMeasurements() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm
 
getMeasurements() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ExtractLabelStatisticsAlgorithm
 
getMeasurements() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm
 
getMeasurements() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.OverlapMeasureLabelsAlgorithm
 
getMeasurements() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm
 
getMeasurements() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm
 
getMeasurements() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm
 
getMeasurements() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm
 
getMeasurements() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
getMeasurements() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm
 
getMeasurements() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm
 
getMeasurements() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
getMembranePatchSize() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature2DSettings
 
getMembranePatchSize() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature3DSettings
 
getMembraneSize() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature2DSettings
 
getMembraneSize() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature3DSettings
 
getMenuBar() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
getMenuBar() - Method in class org.hkijena.jipipe.utils.MenuManager
 
getMenuDataSourcesFor(Class<? extends T>) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Returns data source algorithms that can generate the specified data type Adheres to the data source menu location
getMenuDisabledForeground() - Method in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
Returns the menu disabled foreground color.
getMenuDisabledForeground() - Method in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
Returns the menu disabled foreground color.
getMenuExtensionsTargeting(JIPipeMenuExtensionTarget, JIPipeWorkbench) - Method in class org.hkijena.jipipe.ui.registries.JIPipeCustomMenuRegistry
Gets all extensions for a specific menu
getMenuPath() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
 
getMenuPath() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
getMenuPath() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
getMenuPath() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo
 
getMenuPath() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
getMenuPath() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
Gets the menu path of this algorithm
getMenuPath() - Method in class org.hkijena.jipipe.api.nodes.JIPipeNodeMenuLocation
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.clij2.ui.CLIJControlPanelJIPipeMenuExtension
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.dev.ExportNodeJsonsTool
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.dev.ExportNodeParameterJsonsTool
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.dev.ExportNodeSignatureJsonsTool
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.dev.TriggerBackupAllTool
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.ilastik.RunIlastikMenuExtension
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.tools.BioFormatsConfigTool
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.parameters.ExpressionTesterJIPipeMenuExtension
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.parameters.ParameterTesterJIPipeMenuExtension
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.pipelinerender.PipelineRenderTool
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.plots.NewPlotJIPipeMenuExtension
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2AlgorithmInfo
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.tables.NewTableJIPipeMenuExtension
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.tools.CloseAllImageJWindowsTool
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.tools.CreateLaunchersTool
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.tools.DissolveCompartmentsTool
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.tools.OpenImageJConsoleTool
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.tools.OpenImageJTool
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.tools.RebuildAliasIdsTool
 
getMenuPath() - Method in class org.hkijena.jipipe.extensions.tools.RestartJIPipeTool
 
getMenuPath() - Method in class org.hkijena.jipipe.ui.extension.JIPipeMenuExtension
 
getMenuPathList() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
getMenuPathOf(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData
Returns the menu path of the data type
getMenuPathOf(Class<? extends JIPipeGraphNode>) - Static method in class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo
Returns the menu path of the algorithm
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.clij2.ui.CLIJControlPanelJIPipeMenuExtension
 
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.dev.ExportNodeJsonsTool
 
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.dev.ExportNodeParameterJsonsTool
 
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.dev.ExportNodeSignatureJsonsTool
 
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.dev.TriggerBackupAllTool
 
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.ilastik.RunIlastikMenuExtension
 
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.tools.BioFormatsConfigTool
 
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.parameters.ExpressionTesterJIPipeMenuExtension
 
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.parameters.ParameterTesterJIPipeMenuExtension
 
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.pipelinerender.PipelineRenderTool
 
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.plots.NewPlotJIPipeMenuExtension
 
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.tables.NewTableJIPipeMenuExtension
 
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.tools.CloseAllImageJWindowsTool
 
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.tools.CreateLaunchersTool
 
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.tools.DissolveCompartmentsTool
 
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.tools.OpenImageJConsoleTool
 
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.tools.OpenImageJTool
 
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.tools.RebuildAliasIdsTool
 
getMenuTarget() - Method in class org.hkijena.jipipe.extensions.tools.RestartJIPipeTool
 
getMenuTarget() - Method in class org.hkijena.jipipe.ui.extension.JIPipeMenuExtension
 
getMergedColumn(Set<String>, String, String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Returns a column that contains all values of the selected columns
getMergedDataAnnotation(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Returns a merged annotation
getMergedDataAnnotation(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Returns a merged annotation
getMergedDataAnnotations() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Gets the list of annotations.
getMergedDataAnnotations() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Gets the list of annotations.
getMergedTextAnnotation(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Returns a merged annotation
getMergedTextAnnotation(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Returns a merged annotation
getMergedTextAnnotations() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Gets the list of annotations.
getMergedTextAnnotations() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Gets the list of annotations.
getMergeMode() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByProjectPaths
 
getMergeMode() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.OverwriteAnnotations
 
getMergeMode() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.AnnotateWithDataTableProperties
 
getMergeStrategy() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.ExtractTableAlgorithm
 
getMeshColor() - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.MaskTo3DMeshAlgorithm
 
getMeshLengthUnit() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm
 
getMeshLengthUnit() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
getMeshLengthUnit() - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.MaskTo3DMeshAlgorithm
 
getMeshName() - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.MaskTo3DMeshAlgorithm
 
getMeshNamePrefix() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm
 
getMeshNamePrefix() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
getMessage() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo.StatusUpdatedEvent
 
getMessagePanel() - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager
 
getMetadata() - Method in class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment
 
getMetadata() - Method in class org.hkijena.jipipe.api.JIPipeProject
 
getMetadata() - Method in class org.hkijena.jipipe.api.JIPipeProjectTemplate
 
getMetadata() - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
getMetadata() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentEdge
 
getMetadata() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
getMetadata() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.OMEImageData
 
getMetadata() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
Gets the metadata for this plot instance.
getMetadata() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
 
getMetadata() - Method in interface org.hkijena.jipipe.JIPipeDependency
 
getMetadata() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
 
getMetadata() - Method in class org.hkijena.jipipe.JIPipeMutableDependency
 
getMetadata() - Method in class org.hkijena.jipipe.ui.extensions.UpdateSitePlugin
 
getMetadataEntries() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
getMetadataFacility() - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROGateway
 
getMetadataGenerators() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm
 
getMetadataKey() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.SetVertexMetadataFromImageAlgorithm
 
getMetadataName() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry
 
getMetadataValue() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry
 
getMethod() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm
 
getMethod() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm
 
getMethod() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm
 
getMethod() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm
 
getMethod() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm
 
getMethod() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm
 
getMethod() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm
 
getMethod() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.OMEAccessorTemplate
 
getMethod() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeContextActionWrapperUIContextAction
 
getMimeType() - Method in class org.hkijena.jipipe.extensions.clij2.parameters.OpenCLKernelScript
 
getMimeType() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameter
Returns the MIME type of this script
getMimeType() - Method in class org.hkijena.jipipe.extensions.parameters.library.scripts.ImageJMacro
 
getMimeType() - Method in class org.hkijena.jipipe.extensions.parameters.library.scripts.PythonScript
 
getMimeType() - Method in class org.hkijena.jipipe.extensions.r.parameters.RScriptParameter
 
getMimeType() - Method in class org.hkijena.jipipe.extensions.strings.JsonData
 
getMimeType() - Method in class org.hkijena.jipipe.extensions.strings.StringData
Returns the MIME type of the string
getMimeType() - Method in class org.hkijena.jipipe.extensions.strings.XMLData
 
getMimeType() - Method in class org.hkijena.jipipe.ui.texteditor.JIPipeTextEditor
 
getMin() - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.FloatNumberRangeParameter
 
getMin() - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.IntNumberRangeParameter
 
getMin() - Method in enum org.hkijena.jipipe.utils.ImageJCalibrationMode
 
getMinBlueThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
getMinBlueYellowThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
getMinBrightnessThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
getMinContrastExp() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
getMinCounter() - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm
 
getMinGreenRedThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
getMinGreenThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
getMinHeight() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode
 
getMinHueThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
getMinimumNumberOfPixels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm
 
getMinimumScale() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.FrangiVesselnessFeatures
 
getMinimumValue() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm
 
getMinLength() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
getMinLightnessThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
getMinMaxByDialog(Component, String, String, double, double, double, double) - Static method in class org.hkijena.jipipe.utils.UIUtils
Gets an integer by dialog
getMinNumber() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.NumberRangeParameterGenerator
 
getMinNumber() - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.FloatNumberRangeParameter
 
getMinNumber() - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.IntNumberRangeParameter
 
getMinNumber() - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameter
 
getMinNumCircles() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
getMinParticleCircularity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
getMinParticleSize() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
getMinParticleSize() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm
 
getMinParticleSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
getMinParticleSphericity() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
getMinParticleSphericity() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm
 
getMinPixels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.VolumeOpening2DAlgorithm
 
getMinPixels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.VolumeOpening3DAlgorithm
 
getMinRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
getMinRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.FastCircularHoughSegmentation2DAlgorithm
 
getMinRedThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
getMinSaturationThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
getMinScore() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.FastCircularHoughSegmentation2DAlgorithm
 
getMinSelectableValue() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl
 
getMinSelectableValue() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl
 
getMinSigma() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature2DSettings
 
getMinSigma() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature3DSettings
 
getMinSize() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationThresholdSettings_Old
Deprecated.
 
getMinThickness() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm
 
getMinThreshold() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.FindMaxima3DAlgorithm
 
getMinThreshold() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
getMinThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm
 
getMinThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm
 
getMinThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm
 
getMinThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm
 
getMinThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ThresholdByAnnotation2DAlgorithm
 
getMinThresholdParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm
 
getMinThresholdParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm
 
getMinThresholdParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm
 
getMinTrainMasks() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
getMinTrainMasks() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeTrainingTweaksSettings
 
getMinTrainMasks() - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeTrainingTweaksSettings
 
getMinVolumePixels() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
getMinVolumePixels() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm
 
getMinVoxelNumber() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm
 
getMinWidth() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode
 
getMissingImageJSites() - Method in class org.hkijena.jipipe.JIPipeRegistryIssues
 
getMissingValueReplacement() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm
 
getMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm
 
getMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm
 
getMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
getMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm
 
getMode() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl
 
getMode() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl
 
getMode() - Method in class org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtraction
 
getMode() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.StringOrDouble
 
getMode() - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
getMode() - Method in class org.hkijena.jipipe.ui.components.ImageFrame
 
getMode() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker
 
getMode() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker
 
getModel() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
getModel() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationModelSettings_Old
Deprecated.
 
getModel() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.ModelData
 
getModel() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
getModelChangedEventEmitter() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
 
getModelParameters() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
getModifiedEventEmitter() - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache
 
getModifiedEventEmitter() - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache
 
getModifier() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm
 
getModifier() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.ByteArrayParameterImageJ2ModuleInput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.DoubleArrayParameterImageJ2ModuleInput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.FloatArrayParameterImageJ2ModuleInput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.IntegerArrayParameterImageJ2ModuleInput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.LongArrayParameterImageJ2ModuleInput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.ShortArrayParameterImageJ2ModuleInput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.StringArrayParameterImageJ2ModuleInput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.ParameterImageJ2ModuleInput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.BooleanParameterImageJ2ModuleInput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.ByteParameterImageJ2ModuleInput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.DoubleParameterImageJ2ModuleInput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.FloatParameterImageJ2ModuleInput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.IntegerParameterImageJ2ModuleInput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.LongParameterImageJ2ModuleInput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.ShortParameterImageJ2ModuleInput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.StringParameterImageJ2ModuleInput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.RealTypeParameterImageJ2ModuleInput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.BooleanParameterImageJ2ModuleOutput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.ByteParameterImageJ2ModuleOutput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.DoubleParameterImageJ2ModuleOutput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.FloatParameterImageJ2ModuleOutput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.IntegerParameterImageJ2ModuleOutput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.LongParameterImageJ2ModuleOutput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.ShortParameterImageJ2ModuleOutput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.StringParameterImageJ2ModuleOutput
 
getModuleClass() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.RealTypeParameterImageJ2ModuleOutput
 
getModuleDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.DatasetImageJ2ModuleInput
 
getModuleDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.DataSlotModuleInput
 
getModuleDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.ImagePlusImageJ2ModuleInput
 
getModuleDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.IntervalImageJ2ModuleInput
 
getModuleDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.IterableImageJ2ModuleInput
 
getModuleDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.OutOfBoundsFactoryImageJ2ModuleInput
 
getModuleDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.RandomAccessibleImageJ2ModuleInput
 
getModuleDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.ShapeImageJ2ModuleInput
 
getModuleDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.DatasetImageJ2ModuleOutput
 
getModuleDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.DataSlotModuleOutput
 
getModuleDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.ImagePlusImageJ2ModuleOutput
 
getModuleDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.IntervalImageJ2ModuleOutput
 
getModuleDataType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.RandomAccessibleImageJ2ModuleOutput
 
getModuleItemParameterAccess(ModuleItem<?>) - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNode
 
getModuleNodeInfo() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNode
 
getModuleParameters() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNode
 
getMontageCreator() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage2
 
getMontageCreator() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontage2Algorithm
 
getMouseClickedEventEmitter() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
getMouseDraggedEventEmitter() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
getMouseEnteredEventEmitter() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
getMouseEvent() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.PixelHoverEvent
 
getMouseExitedEventEmitter() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
getMouseModelPixelCoordinate(MouseEvent, boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
Gets the pixel coordinates inside the shown image under the mouse.
getMouseMovedEventEmitter() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
getMousePressedEventEmitter() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
getMouseReleasedEventEmitter() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
getMovieAnimatedDimension() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImage2Algorithm
 
getMovieAnimatedDimension() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
getMovieAnimatedDimension() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm
 
getMovieFPS() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImage2Algorithm
 
getMovieFPS() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
getMovieFPS() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm
 
getMultiChannelMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.HistogramGenerator
 
getMultiColorIndex() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
getMultiColorMax() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
getMultiLineStringByDialog(Component, String, String, String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Gets a multiline string by dialog
getMultiObjectMaximumBoundingBoxOverlap() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
getMultiObjectScoreThreshold() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
getMultiPartOutputName() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
getMultiplier() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.Warp2DAlgorithm
 
getName() - Method in interface org.hkijena.jipipe.api.annotation.JIPipeAnnotation
 
getName() - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataAnnotation
 
getName() - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
 
getName() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory
 
getName() - Method in class org.hkijena.jipipe.api.compartments.JIPipeCompartmentsPlugin
 
getName() - Method in interface org.hkijena.jipipe.api.compat.ImageJDataExporter
A documentation name.
getName() - Method in interface org.hkijena.jipipe.api.compat.ImageJDataImporter
A documentation name.
getName() - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters
 
getName() - Method in class org.hkijena.jipipe.api.compat.ImageJImportParameters
 
getName() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation
 
getName() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
 
getName() - Method in interface org.hkijena.jipipe.api.data.JIPipeDataOperation
 
getName() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
 
getName() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
getName() - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail
 
getName() - Method in class org.hkijena.jipipe.api.data.JIPipeExportedDataAnnotation
The name of this data annotation
getName() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
getName() - Method in class org.hkijena.jipipe.api.environments.JIPipeEnvironment
 
getName() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
getName() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool
 
getName() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
getName() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool
 
getName() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
getName() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
getName() - Method in class org.hkijena.jipipe.api.grouping.GroupingPlugin
 
getName() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
getName(JIPipeParameterTree) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference
Gets the name or custom name
getName() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess
 
getName() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup
 
getName() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal.Snapshot
 
getName() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournalSnapshot
 
getName() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal.Snapshot
 
getName() - Method in class org.hkijena.jipipe.api.JIPipeMetadata
 
getName() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
getName() - Method in class org.hkijena.jipipe.api.looping.LoopingPlugin
 
getName() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
getName() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
getName() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
getName() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory
 
getName() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
getName() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory
 
getName() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory
 
getName() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory
 
getName() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory
 
getName() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
getName() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory
 
getName() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory
 
getName() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
getName() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
getName() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
getName() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
getName() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry
 
getName() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo
 
getName() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
getName() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the algorithm name
getName() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
Returns the algorithm name
getName() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory
The name displayed in menus and other UI
getName() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterTypeInfo
 
getName() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.UserParameterDefinition
 
getName() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
 
getName() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess
 
getName() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
getName() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Returns the parameter name that is displayed to the user
getName() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterGenerator
 
getName() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
getName() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterTypeInfo
 
getName() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
getName() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ColumnOperationEntry
 
getName() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ExpressionFunctionEntry
 
getName() - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry.InstallerEntry
 
getName() - Method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry.Sheet
 
getName() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
getName() - Method in class org.hkijena.jipipe.extensions.annotation.AnnotationsPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.batchassistant.BatchAssistantPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.cellpose.CellposePlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeModelData
 
getName() - Method in class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeSizeModelData
 
getName() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo.OutputTableColumnInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.core.CorePlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.core.data.CopyContainingFolderDataImportOperation
 
getName() - Method in class org.hkijena.jipipe.extensions.core.data.DefaultDataDisplayOperation
 
getName() - Method in class org.hkijena.jipipe.extensions.core.data.OpenContainingFolderDataImportOperation
 
getName() - Method in class org.hkijena.jipipe.extensions.core.data.OpenInNativeApplicationDataImportOperation
 
getName() - Method in class org.hkijena.jipipe.extensions.core.data.OpenTextInJIPipeDataOperation
 
getName() - Method in class org.hkijena.jipipe.extensions.dev.DevelopmentPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionConstantEntry
 
getName() - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionOperatorEntry
 
getName() - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionParameterVariableInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.expressions.ParameterInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.filesystem.compat.PathDataFromTableImageJImporter
 
getName() - Method in class org.hkijena.jipipe.extensions.filesystem.FilesystemPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.filesystem.resultanalysis.CopyPathDataOperation
 
getName() - Method in class org.hkijena.jipipe.extensions.filesystem.resultanalysis.OpenPathDataOperation
 
getName() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.ParameterFormData
 
getName() - Method in class org.hkijena.jipipe.extensions.forms.FormsPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.graphannotation.GraphAnnotationPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
getName() - Method in class org.hkijena.jipipe.extensions.ij3d.display.AddROI3DToManagerOperation
 
getName() - Method in class org.hkijena.jipipe.extensions.ij3d.IJ3DPlugin
 
getName() - Method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurementColumn
 
getName() - Method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurementColumn
 
getName() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsNodeTypeCategory
 
getName() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.trackscheme.TrackSchemeDataDisplayOperation
 
getName() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.TrackMatePlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.ijweka.WekaPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.ilastik.datatypes.IlastikModelData
 
getName() - Method in class org.hkijena.jipipe.extensions.ilastik.IlastikPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2Plugin
 
getName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.ImageJAlgorithmsPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm.ROINameToLabelEntry
 
getName() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementColumn
 
getName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator.GeneratedColumn
 
getName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.OMEAccessorTemplate
 
getName() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ImagePlusDataFromImageWindowImageJImporter
 
getName() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddROIToActiveJIPipeImageViewerDataDisplay
 
getName() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddROIToJIPipeImageViewerDataDisplay
 
getName() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddToROIManagerDataDisplay
 
getName() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.OpenInImageJDataDisplay
 
getName() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImportImageJPathDataOperation
 
getName() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.MeasurementColumn
 
getName() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawer2DTool
 
getName() - Method in class org.hkijena.jipipe.extensions.imp.ImpPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionLoaderPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.multiparameters.MultiParameterAlgorithmsPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.multiparameters.MultiParametersPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.nodeexamples.LoadExampleContextMenuAction
 
getName() - Method in class org.hkijena.jipipe.extensions.nodetemplate.AddTemplateContextMenuAction
 
getName() - Method in class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplateBoxToolPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage
 
getName() - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderRepository
 
getName() - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROAnnotationReferenceData
 
getName() - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMERODatasetReferenceData
 
getName() - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROImageReferenceData
 
getName() - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROProjectReferenceData
 
getName() - Method in class org.hkijena.jipipe.extensions.omero.OMEROPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.omnipose.OmniposePlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterItemParameterAccess
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterGenerator
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterTypeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterInputAccess
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterOutputAccess
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterParameterAccess
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterKeyAccess
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterValueAccess
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.filesystem.FileChooserBookmark
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanParameterTypeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanPrimitiveParameterTypeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ByteParameterTypeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BytePrimitiveParameterTypeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.DoubleParameterTypeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.DoublePrimitiveParameterTypeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.FloatParameterTypeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.FloatPrimitiveParameterTypeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.IntParameterTypeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.IntPrimitiveParameterTypeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.LongParameterTypeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.LongPrimitiveParameterTypeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.NumberRangeParameterGenerator
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ShortParameterTypeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ShortPrimitiveParameterTypeInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRef
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ParameterColumn
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableCellAccess
 
getName() - Method in class org.hkijena.jipipe.extensions.parameters.StandardParametersPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.pipelinerender.PipelineRenderPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotDataSeries
 
getName() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2AlgorithmInfo
 
getName() - Method in class org.hkijena.jipipe.extensions.plots.PlotsPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.plots.ui.resultanalysis.OpenPlotInJIPipeDataOperation
 
getName() - Method in class org.hkijena.jipipe.extensions.processes.ProcessesPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller.Configuration
 
getName() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller.Configuration
 
getName() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectCondaEnvPythonInstaller.Configuration
 
getName() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectSystemPythonInstaller.Configuration
 
getName() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectVirtualEnvPythonInstaller.Configuration
 
getName() - Method in class org.hkijena.jipipe.extensions.python.PythonPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.r.installers.REnvInstaller.Configuration
 
getName() - Method in class org.hkijena.jipipe.extensions.r.RPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DIndexedMeshGeometry
 
getName() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry
 
getName() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
getName() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DUnindexedMeshGeometry
 
getName() - Method in class org.hkijena.jipipe.extensions.scene3d.model.Scene3DGroupNode
 
getName() - Method in interface org.hkijena.jipipe.extensions.scene3d.model.Scene3DNode
Gets the name of this node
getName() - Method in class org.hkijena.jipipe.extensions.scene3d.Scene3DPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.settings.StandardSettingsPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.strings.StringsPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.tables.display.CacheAwareOpenResultsTableInJIPipeDataOperation
 
getName() - Method in class org.hkijena.jipipe.extensions.tables.display.OpenResultsTableInImageJDataOperation
 
getName() - Method in class org.hkijena.jipipe.extensions.tables.display.OpenResultsTableInJIPipeTabDataOperation
 
getName() - Method in class org.hkijena.jipipe.extensions.tables.TablesPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.tools.ToolsPlugin
 
getName() - Method in class org.hkijena.jipipe.extensions.utils.contextmenu.ParameterExplorerContextMenuAction
 
getName() - Method in class org.hkijena.jipipe.extensions.utils.display.ImportJIPipeProjectDataOperation
 
getName() - Method in class org.hkijena.jipipe.extensions.utils.UtilitiesPlugin
 
getName() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
 
getName() - Method in class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency
 
getName() - Method in class org.hkijena.jipipe.ui.cache.JIPipeAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEvent
 
getName() - Method in class org.hkijena.jipipe.ui.components.AddParameterDialog.Settings
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphCopyNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphCutNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphDuplicateNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphPasteNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentCopyNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentCutNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentPasteNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddBookmarkNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddNewCompartmentUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddNewNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ClearCacheNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.CollapseIOInterfaceNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DeleteCompartmentUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DeleteNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisablePassThroughNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableSaveOutputsNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableVirtualOutputNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnablePassThroughNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableSaveOutputsNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableVirtualOutputsNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ExportCompartmentAsJsonNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ExportCompartmentToNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ExportNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.GroupNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.InvertSelectionNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.IsolateNodesUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.JsonAlgorithmToGroupNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.LockNodeLocationSizeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.LowerUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIDownContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUILeftContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIRightContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIUpContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeContextActionWrapperUIContextAction
 
getName() - Method in interface org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.OpenCacheBrowserInWindowUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RaiseUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RemoveBookmarkNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RunAndShowIntermediateResultsNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RunAndShowResultsNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SelectAllNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SelectAndMoveNodeHereNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SendToBackgroundUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SendToForegroundUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SetNodeHotkeyContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UnlockNodeLocationSizeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheOnlyPredecessorsNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheShowIntermediateNodeUIContextAction
 
getName() - Method in class org.hkijena.jipipe.ui.history.CurrentStateSnapshot
 
getName() - Method in class org.hkijena.jipipe.ui.parameters.DynamicParameterEditorDialog.ParameterEntry
 
getName() - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesBuilder
 
getName() - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderPackage
 
getName() - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderRepository
 
getName() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogEntry
 
getName() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
 
getName() - Method in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
Return the name of this theme, "Ocean".
getName() - Method in enum org.hkijena.jipipe.ui.theme.JIPipeUITheme
 
getName() - Method in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
Return the name of this theme, "Ocean".
getNameAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
getNameAnnotation() - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm
 
getNameAnnotation() - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm
 
getNameAnnotation() - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm
 
getNameColumn() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.ExtractROI3DMetadataAlgorithm
 
getNameColumn() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.ExtractROIMetadataAlgorithm
 
getNameFilter() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.DataAnnotationToStringAnnotation
 
getNameFilter() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveDataAnnotations
 
getNameGenerator() - Method in class org.hkijena.jipipe.extensions.omero.nodes.manage.OMEROCreateDatasetAlgorithm
 
getNameOf(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData
Returns the name of a data type
getNameOf(Class<? extends JIPipeGraphNode>) - Static method in class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo
Returns the name of an algorithm
getNamespaceMap() - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.AnnotateWithXPathDataAlgorithm
 
getNamespaceMap() - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractTextFromXMLAlgorithm
 
getNamespaceMap() - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm
 
getNativeLocation() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUIAddSlotButtonActiveArea
 
getNativeLocation() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
getNativeMeasurementEnumValue() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.MeasurementColumnSortOrder.List
Returns the integer value that describes which measurements to extract
getNativeType(String) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.Hdf5Utils
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm.CriteriaMethod
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm.ThresholdMethod
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurement
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurementColumn
 
getNativeValue() - Method in class org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurementSetParameter
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurement
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurementColumn
 
getNativeValue() - Method in class org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurementSetParameter
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.CycleRemovalMethod
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm.Method
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm.Mode
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurement
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementColumn
 
getNativeValue() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementSetParameter
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.InterpolationMethod
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.Neighborhood2D
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.Neighborhood3D
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.AVICompression
 
getNativeValue() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.ImageStatisticsSetParameter
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.Measurement
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.MeasurementColumn
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.RoiRelationMeasurement
 
getNativeValue() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.RoiRelationMeasurementSet
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.Image3DRenderType
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.imp.datatypes.ImpImageOutputFormat
 
getNativeValue() - Method in enum org.hkijena.jipipe.extensions.parameters.library.primitives.FontStyleParameter
 
getNativeValue() - Method in enum org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.TabPlacement
 
getNativeValue() - Method in enum org.hkijena.jipipe.utils.ui.ListSelectionMode
 
getNativeValue2D() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.Neighborhood2D3D
 
getNativeValue3D() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.Neighborhood2D3D
 
getNativeWidth() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUIAddSlotButtonActiveArea
 
getNativeWidth() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
getNChannels() - Method in interface org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.ColorSpace
Returns the number of pixel channels.
getNChannels() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.GreyscaleColorSpace
 
getNChannels() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.HSBColorSpace
 
getNChannels() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.IgnoreColorSpace
 
getNChannels() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.LABColorSpace
 
getNChannels() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.RGBColorSpace
 
getNChannels() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
getnDirections() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm
 
getNeighborhood() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi2DToRoi3DConverterAlgorithm
 
getNeighborhood() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
getNeighborhood() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
getNewColumnName() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.UnMeltTableAlgorithm
 
getNewEdgeColor() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
getNewEdgeColor() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
getNewExtensions() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
A set of extensions that are new and should be made known to the user
getNewInstanceGenerator() - Method in class org.hkijena.jipipe.extensions.parameters.api.graph.SlotMapParameterCollection
 
getNewLabelColumn() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm
 
getNewLocationExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ReorderHyperstackSlicesExpressionAlgorithm
 
getNewName() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumns2Algorithm.RenamingEntry
 
getNewScratch() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns a new scratch directory that is unique and based on the alias ID of this node
getNewTool() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.ToolChangedEvent
 
getNextFillPaint() - Method in class org.hkijena.jipipe.extensions.plots.utils.ColorMapSupplier
 
getNextPaint() - Method in class org.hkijena.jipipe.extensions.plots.utils.ColorMapSupplier
 
getNextVertices() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph
 
getNFrames() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
getNode() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
 
getNode() - Method in class org.hkijena.jipipe.api.JIPipeProjectTemplate
 
getNode() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
 
getNode() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
getNode() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
 
getNode() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
getNode() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeAddedEvent
 
getNode() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeRemovedEvent
 
getNode() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.NodeSlotsChangedEvent
 
getNode() - Method in class org.hkijena.jipipe.extensions.parameters.api.graph.SlotMapParameterCollection
 
getNode() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCachedDataDisplayCacheControl
 
getNode() - Method in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmSettingsPanel
 
getNode() - Method in class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonAlgorithmExporterSingleSelectionPanelUI
 
getNode() - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties.JIPipePipelineSingleAlgorithmSelectionPanelUI
 
getNode() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
getNodeAddedEventEmitter() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
getNodeAliasIDAnnotation() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.ExtractParametersAlgorithm
 
getNodeByUUID(UUID) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Gets a node by its UUID
getNodeClass() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
getNodeConnectedEventEmitter() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
getNodeCount() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
getNodeDatabase() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
getNodeDatabaseRole() - Method in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmSettingsPanelIOEditor
 
getNodeDatabaseRole() - Method in class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExporter
 
getNodeDatabaseRole() - Method in class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExtensionGraphUI
 
getNodeDatabaseRole() - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.JIPipePipelineGraphEditorUI
 
getNodeDatabaseRole() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.JIPipeCompartmentsGraphEditorUI
 
getNodeDatabaseRole() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
getNodeDisconnectedEventEmitter() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
getNodeExamples(String) - Method in class org.hkijena.jipipe.api.JIPipeProject
Gets all examples for a node type ID.
getNodeExamples(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
 
getNodeForHotkey(NodeHotKeyStorage.Hotkey, UUID) - Method in class org.hkijena.jipipe.ui.grapheditor.NodeHotKeyStorage
 
getNodeGroup() - Method in class org.hkijena.jipipe.ui.grouping.JIPipeNodeGroupUI
 
getNodeHotKeyStorage() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getNodeId() - Method in class org.hkijena.jipipe.api.nodes.JIPipeNodeExample
 
getNodeId() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm
 
getNodeInfo() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
getNodeInfo() - Method in class org.hkijena.jipipe.api.nodes.JIPipeNodeExample
 
getNodeInfo() - Method in class org.hkijena.jipipe.JIPipeService.NodeInfoRegisteredEvent
 
getNodeInfo() - Method in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmSettingsPanel
 
getNodeInfo() - Method in class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExporter
 
getNodeInfo() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeContextActionWrapperUIContextAction
 
getNodeInfoDeselectedEventEmitter() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker
 
getNodeInfoRegisteredEventEmitter() - Method in class org.hkijena.jipipe.JIPipe
 
getNodeInfoRegisteredEventEmitter() - Method in interface org.hkijena.jipipe.JIPipeService
 
getNodeInfos() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
 
getNodeInfoSelectedEventEmitter() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker
 
getNodeInfosFromClass(Class<? extends JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Returns all node infos that create a node of the specified class
getNodeLegacyCompartmentIDs() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
getNodeName(JIPipeDataSlot) - Static method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotPreview
Returns the name of the algorithm that generated the data
getNodeNameAnnotation() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.ExtractParametersAlgorithm
 
getNodeParameters() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
getNodeParameters() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
getNodePathMap() - Method in class org.hkijena.jipipe.ui.settings.JIPipeApplicationSettingsUI
 
getNodeRegistry() - Method in class org.hkijena.jipipe.JIPipe
 
getNodeRegistry() - Method in interface org.hkijena.jipipe.JIPipeService
 
getNodeRemovedEventEmitter() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
getNodes() - Method in class org.hkijena.jipipe.api.looping.LoopGroup
 
getNodes() - Static method in class org.hkijena.jipipe.JIPipe
 
getNodesAfter(int, int) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getNodeSelectionChangedEventEmitter() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getNodeSlotsChangedEventEmitter() - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration
 
getNodeSlotsChangedEventEmitter() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
getNodeSlotsChangedEventEmitter() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
 
getNodesOfCategory(JIPipeNodeTypeCategory, boolean) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Gets all algorithms of specified category
getNodesWithinCompartment(UUID) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns the algorithms within the specified compartment ID.
getNodeTemplate() - Method in class org.hkijena.jipipe.api.nodes.JIPipeNodeExample
 
getNodeTemplateDownloadRepositories() - Method in class org.hkijena.jipipe.extensions.settings.NodeTemplateSettings
 
getNodeTemplates() - Method in class org.hkijena.jipipe.api.JIPipeProjectMetadata
 
getNodeTemplates() - Method in class org.hkijena.jipipe.extensions.settings.NodeTemplateSettings
 
getNodeTemplatesRefreshedEventEmitter() - Method in class org.hkijena.jipipe.JIPipe
 
getNodeUI() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.NodeUISelectedEvent
 
getNodeUI() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUIActiveArea
 
getNodeUIActionRequestedEventEmitter() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getNodeUIActionRequestedEventEmitter() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
getNodeUIs() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getNodeUISelectedEventEmitter() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getNodeUIsFor(Set<T>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getNodeUUID() - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.ClearedEvent
 
getNodeUUID() - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.StoredEvent
 
getNodeUUID() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeCachedDataSlotDataSource
 
getNodeUUIDAnnotation() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.ExtractParametersAlgorithm
 
getNoImageIcon() - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Returns the icon to use if the image couldn't be found.
getNoise() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.FindMaxima3DAlgorithm
 
getNonParameterInputSlots() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm
 
getNonSpatialLocation() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
getNormalize() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.SymmetryFilter3DAlgorithm
 
getNormals() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DIndexedMeshGeometry
 
getNormals() - Method in interface org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DMeshGeometry
 
getNormals() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DUnindexedMeshGeometry
 
getNormalsIndex() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DIndexedMeshGeometry
 
getNormalsIndex() - Method in interface org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DMeshGeometry
 
getNormalsIndex() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DUnindexedMeshGeometry
 
getNotification() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.DismissedEvent
 
getNotification() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.PushedEvent
 
getNotificationInbox() - Method in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmWindow
 
getNotificationInbox() - Method in class org.hkijena.jipipe.ui.ijupdater.MissingRegistrationUpdateSiteResolver
 
getNotificationInbox() - Method in class org.hkijena.jipipe.ui.JIPipeDummyWorkbench
 
getNotificationInbox() - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWorkbench
 
getNotificationInbox() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
getNotificationInbox() - Method in interface org.hkijena.jipipe.ui.JIPipeWorkbench
Allows to send notifications on a workbench-level
getNotifications() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
getNotifications() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox
 
getNotifications() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogEntry
 
getNoWindows() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
getNSlices() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
getNSpots() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotsCollectionData
 
getNTracks() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
 
getNuclearChannel() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
getNuclearChannel() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeChannelSettings
 
getNumArgs() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
getNumberOf(JIPipeValidationReportEntryLevel) - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReport
 
getNumBins() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm
 
getNumBins() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
getNumChannels() - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
getNumDataAnnotationColumns() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.AnnotateWithDataTableProperties
 
getNumDimensions() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageDimensions
 
getNumEpochs() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
getNumEpochs() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
getNumEpochs() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
getNumFrames() - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
getNumIncompleteOptional() - Method in class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
getNumIncompleteRequired() - Method in class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
getNumIterationSteps() - Method in interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationContext
Number of available iteration steps
getNumIterationSteps() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMutableIterationContext
 
getNumMerging() - Method in class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
getNumRows() - Method in class org.hkijena.jipipe.ui.components.FormPanel
 
getNumRows() - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon
 
getNumRowsAnnotation() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.AnnotateWithDataTableProperties
 
getNumScales() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.FrangiVesselnessFeatures
 
getNumSlices() - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
getNumTextAnnotationColumns() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.AnnotateWithDataTableProperties
 
getNumThreads() - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration
 
getNumThreads() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
getNumThreads() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersAlgorithm
 
getNumThreads() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaClassification2DAlgorithm
 
getNumThreads() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaClassification3DAlgorithm
 
getNumThreads() - Method in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmWindow
 
getNumThreads() - Method in class org.hkijena.jipipe.ui.quickrun.QuickRunSettings
 
getNumTilesX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
getNumTilesX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
getNumTilesY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
getNumTilesY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
getNumVertices() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DIndexedMeshGeometry
 
getNumVertices() - Method in interface org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DMeshGeometry
 
getNumVertices() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DUnindexedMeshGeometry
 
getObject3D() - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
getObjectMapper() - Static method in class org.hkijena.jipipe.utils.json.JsonUtils
 
getOffset() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.PairOfPointsImageJ2ShapeData
 
getOldLabelColumn() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm
 
getOldTool() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.ToolChangedEvent
 
getOpacity() - Method in class org.hkijena.jipipe.extensions.ij3d.utils.Roi3DDrawer
 
getOpacity() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
getOpacity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel
Deprecated.
 
getOpacity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
getOpacity() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
getOpacity() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageBlendLayer
 
getOpacity() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
getOpacityStep() - Method in class org.hkijena.jipipe.ui.components.icons.AnimatedIcon
 
getOpenInputSlots() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns all input slots that do not have data set.
getOpenTabs() - Method in class org.hkijena.jipipe.ui.project.JIPipeProjectTabMetadata
 
getOpenViewerPanels() - Static method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
getOpenWindows() - Static method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
 
getOpenWindows() - Static method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
 
getOperands() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DAlgorithm
 
getOperands() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm
 
getOperation() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ColumnOperationEntry
 
getOperation() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ROI3DCalculatorAlgorithm
 
getOperation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm
 
getOperation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DAlgorithm
 
getOperation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DMergingAlgorithm
 
getOperation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm
 
getOperation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm
 
getOperation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm
 
getOperation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm
 
getOperation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm
 
getOperation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm
 
getOperation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiCalculatorAlgorithm
 
getOperation() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.IntegratingColumnOperationEntry
 
getOperator() - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionOperatorEntry
 
getOpInfo() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
getOptionalParameter() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
 
getOrCreateBand(String) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Task
 
getOrCreateBand(String, String) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Task
 
getOrCreateColumnIndex(String, boolean) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Returns the index of an existing column or creates a new column if it does not exist
getOrCreateDataAnnotationColumnArray_(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets the annotation data column or creates it Ensures that the output size is equal to getRowCount() NOT THREAD-SAFE, REQUIRES A WRITE LOCK!
getOrCreateMenu(String...) - Method in class org.hkijena.jipipe.utils.MenuManager
 
getOrCreateParameterDataOutputSlot() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
Gets or creates the output slot for exported module parameters The slot has a data type ParametersData
getOrCreateTask(String) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon
 
getOrCreateTask(String, String) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon
 
getOrCreateTextAnnotationColumnArray_(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets the annotation column or creates it Ensures that the output size is equal to getRowCount() NOT THREAD-SAFE, REQUIRES A WRITE LOCK!
getOrder() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation
 
getOrder() - Method in interface org.hkijena.jipipe.api.data.JIPipeDataOperation
 
getOrder() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
getOrder() - Method in class org.hkijena.jipipe.extensions.core.data.CopyContainingFolderDataImportOperation
 
getOrder() - Method in class org.hkijena.jipipe.extensions.core.data.DefaultDataDisplayOperation
 
getOrder() - Method in class org.hkijena.jipipe.extensions.core.data.OpenContainingFolderDataImportOperation
 
getOrder() - Method in class org.hkijena.jipipe.extensions.core.data.OpenInNativeApplicationDataImportOperation
 
getOrder() - Method in class org.hkijena.jipipe.extensions.core.data.OpenTextInJIPipeDataOperation
 
getOrder() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExtractParent
 
getOrder() - Method in class org.hkijena.jipipe.extensions.filesystem.resultanalysis.CopyPathDataOperation
 
getOrder() - Method in class org.hkijena.jipipe.extensions.filesystem.resultanalysis.OpenPathDataOperation
 
getOrder() - Method in class org.hkijena.jipipe.extensions.ij3d.display.AddROI3DToManagerOperation
 
getOrder() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.trackscheme.TrackSchemeDataDisplayOperation
 
getOrder() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddROIToActiveJIPipeImageViewerDataDisplay
 
getOrder() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddROIToJIPipeImageViewerDataDisplay
 
getOrder() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddToROIManagerDataDisplay
 
getOrder() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.OpenInImageJDataDisplay
 
getOrder() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImportImageJPathDataOperation
 
getOrder() - Method in class org.hkijena.jipipe.extensions.plots.ui.resultanalysis.OpenPlotInJIPipeDataOperation
 
getOrder() - Method in class org.hkijena.jipipe.extensions.tables.display.CacheAwareOpenResultsTableInJIPipeDataOperation
 
getOrder() - Method in class org.hkijena.jipipe.extensions.tables.display.OpenResultsTableInImageJDataOperation
 
getOrder() - Method in class org.hkijena.jipipe.extensions.tables.display.OpenResultsTableInJIPipeTabDataOperation
 
getOrder() - Method in class org.hkijena.jipipe.extensions.utils.display.ImportJIPipeProjectDataOperation
 
getOrderAssignment() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackToDimensionMerger2Algorithm
 
getOrderedCompositeBlendLayers() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
getOrderExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm
Deprecated.
 
getOrderExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2
 
getOriginalAnnotations(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Gets the original annotations of given slot
getOriginalAnnotations(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Gets the original annotations of given slot
getOriginalBitDepth() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo
 
getOriginalDataAnnotations(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Gets the original annotations of given slot
getOriginalDataAnnotations(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Gets the original annotations of given slot
getOriginalDataAnnotations(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Gets the original annotations of given slot
getOriginalDataAnnotations(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Gets the original annotations of given slot
getOriginalHeight() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo
 
getOriginalName(JIPipeParameterTree) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference
Gets the name in the original graph Returns null if resolve() is unsuccessful
getOriginalProjectPath() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItem
 
getOriginalProjectPath() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItemCollection
 
getOriginalTextAnnotations(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Gets the original annotations of given slot
getOriginalTextAnnotations(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Gets the original annotations of given slot
getOriginalWidth() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo
 
getOrOpenPipelineEditorTab(JIPipeProjectCompartment, boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
Opens the graph editor for specified compartment
getOutline() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process.OutlineRoi3DAlgorithm
 
getOutline() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.RemoveBorderRoisAlgorithm
 
getOutline() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.OutlineRoiAlgorithm
 
getOutput() - Method in class org.hkijena.jipipe.api.backups.CollectBackupsRun
 
getOutput() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter
 
getOutputAnnotation() - Method in class org.hkijena.jipipe.extensions.forms.utils.SingleAnnotationIOSettings
 
getOutputBackgroundColumn() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator
 
getOutputBackgroundColumn() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator
 
getOutputBackgroundColumn() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator
 
getOutputCategoryColumnName() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.MeltTableAlgorithm
 
getOutputClass() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter
 
getOutputColumnBinCount() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
getOutputColumnBinMax() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
getOutputColumnBinMin() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
getOutputDimension() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
 
getOutputDimension() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.CreateStackAlgorithm
 
getOutputDirectory() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter
 
getOutputDirectory() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataTableByParameter
 
getOutputDirectory() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.ExportROI3DAlgorithm
Deprecated.
 
getOutputDirectory() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
getOutputDirectory() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportROIAlgorithm
Deprecated.
 
getOutputDirectory() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm
Deprecated.
 
getOutputDirectory() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm
Deprecated.
 
getOutputDirectory() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.BioFormatsExporter
Deprecated.
 
getOutputDirectory() - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.ExportScene3DToColladaAlgorithm
Deprecated.
 
getOutputDirectory() - Method in class org.hkijena.jipipe.ui.ArchiveProjectToDirectoryRun
 
getOutputExtension() - Method in class org.hkijena.jipipe.extensions.strings.JsonData
 
getOutputExtension() - Method in class org.hkijena.jipipe.extensions.strings.StringData
The extension that is generated by the output function
getOutputExtension() - Method in class org.hkijena.jipipe.extensions.strings.XMLData
 
getOutputFile() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Video2DExporterRun
 
getOutputFile() - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderPackage
 
getOutputFolder() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Stack2DExporterRun
 
getOutputForegroundColumn() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator
 
getOutputForegroundColumn() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator
 
getOutputForegroundColumn() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator
 
getOutputFromImageJImporters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.MacroWrapperAlgorithm
 
getOutputImage() - Method in class org.hkijena.jipipe.extensions.pipelinerender.RenderPipelineRun
The generated image.
getOutputImageType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.MatrixToImageAlgorithm
 
getOutputImageType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableToImageAlgorithm
 
getOutputIndices() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm
 
getOutputKeyColumn() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator
 
getOutputKeyColumn() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm
 
getOutputModuleIO() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
getOutputName() - Method in class org.hkijena.jipipe.api.cache.JIPipeCache.StoredEvent
 
getOutputNode() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
 
getOutputOutgoingTargetSlots(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns the list of input slots that are provided by the source slot Returns an empty set if the target is an input or no slot exists
getOutputParameters() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
getOutputParameters() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
getOutputParameters() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
getOutputParameters() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm
 
getOutputParameters() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
getOutputParameters() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
getOutputParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm
 
getOutputPath() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
getOutputPath() - Method in class org.hkijena.jipipe.ui.quickrun.QuickRunSettings
 
getOutputSelectedEventEmitter() - Method in class org.hkijena.jipipe.ui.cache.JIPipeAlgorithmCacheBrowserOutputSelectorUI
 
getOutputSettings() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
getOutputSlot(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the output slot with the specified name.
getOutputSlotExporters() - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration
 
getOutputSlotMap() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Gets all output slot instances
getOutputSlotMap() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
getOutputSlotName(ModuleItem<?>) - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
getOutputSlotOrder() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
getOutputSlotOrder() - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration
 
getOutputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
getOutputSlots() - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration
 
getOutputSlots() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
getOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
getOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
getOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
getOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
getOutputSlots() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry
 
getOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo
 
getOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
getOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns all output slots ordered by the slot order
getOutputSlots() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
Returns general output data.
getOutputSlots() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
getOutputSlots() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo
 
getOutputSlots() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo
 
getOutputSlots() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
getOutputSlots() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2AlgorithmInfo
 
getOutputSlotsWithRole(JIPipeDataSlotRole) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Gets all input slots that have the specified role
getOutputSlotToArgIndexMap() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
getOutputsString() - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration
 
getOutputStream() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree
 
getOutputTable() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation.ImportDataRun
 
getOutputTableColumnInfos() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
getOutputTableModel() - Method in class org.hkijena.jipipe.ui.tableeditor.JIPipeSummarizeTableColumnsDialogUI
 
getOutputThresholdColumn() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator
 
getOutputThresholdColumn() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator
 
getOutputThresholdColumn() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator
 
getOutputType() - Method in interface org.hkijena.jipipe.api.data.JIPipeDataConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ImplicitResultsTableDataConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageToImagePlusDataConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.ImagePlusDataToCLIJImageDataConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImplicitPathTypeConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.FilamentsToRoi3dDataTypeConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.FilamentsToRoiDataTypeConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.SpotsToRoiConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagej2.converters.ImageJ1ToImageJ2Converter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagej2.converters.ImageJ2ToImageJ1Converter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling2DAlgorithm
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling3DAlgorithm
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.ColorToGreyscaleExpression2D
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyColorMathExpression2DExpression
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap2DAlgorithm
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap3DAlgorithm
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.GeodesicDistanceMap2DAlgorithm
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.LabelChamferDistanceMap3DAlgorithm
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePlusToOMEImageTypeConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImageToLUTTypeConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImageTypeConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImplicitImageTypeConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.LUTToImageTypeConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.OMEImageToImagePlusTypeConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.OmeImageToOMEXMLTypeConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.OMEImageToROITypeConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.PlotToImageTypeConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImageJImageToImpImageDataTypeConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageToImageJImageDataTypeConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.multiparameters.converters.ParametersDataToResultsTableDataConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.plots.converters.PlotToTableConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.strings.StringDataConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.tables.DoubleArrayColumnToTableConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.tables.StringArrayColumnToTableConverter
 
getOutputType() - Method in class org.hkijena.jipipe.extensions.utils.datatypes.PathDataToJIPipeOutputConverter
 
getOutputValueColumn() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator
 
getOutputValueColumn() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm
 
getOutputValueColumnName() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.MeltTableAlgorithm
 
getOutputVectorSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm
 
getOutputZipFile() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToZIPExporterRun
 
getOutsideColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
getOverlapFilter() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
getOverlapFilter() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
getOverlapFilter() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings
 
getOverlapFilter() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
getOverlapFilter() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
getOverlapFilterMeasurements() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm
 
getOverlapFilterMeasurements() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
getOverlapFilterMeasurements() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm
 
getOverlapFilterMeasurements() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm
 
getOverlapFilterMeasurements() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
getOverlapResolution() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
getOverlapX() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling2DSettings
 
getOverlapX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
getOverlapX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
getOverlapY() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling2DSettings
 
getOverlapY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
getOverlapY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
getOverlays() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
Gets overlay data
getOverlays() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
getOverriddenParameters() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
getOverrideArguments() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessIteratingAlgorithm
 
getOverrideArguments() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessMergingAlgorithm
 
getOverrideCredentials() - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm
 
getOverrideCredentials() - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm
 
getOverrideCredentials() - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm
 
getOverrideCredentials() - Method in class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMERODatasetReferenceDataSource
 
getOverrideCredentials() - Method in class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROImageReferenceDataSource
 
getOverrideCredentials() - Method in class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROProjectReferenceDataSource
 
getOverrideCredentials() - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROImageAlgorithm
 
getOverrideCredentials() - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROTableAlgorithm
 
getOverrideCredentials() - Method in class org.hkijena.jipipe.extensions.omero.nodes.manage.OMEROCreateDatasetAlgorithm
 
getOverrideCredentials() - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListDatasetsAlgorithm
 
getOverrideCredentials() - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListGroupsAlgorithm
 
getOverrideCredentials() - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListImagesAlgorithm
 
getOverrideCredentials() - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListProjectsAlgorithm
 
getOverrideCredentials() - Method in class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROImageAlgorithm
 
getOverrideCredentials() - Method in class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROTableAlgorithm
 
getOverrideEdgeColor() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
getOverrideEdgeColor() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
getOverrideEdgeRadius() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
getOverrideEdgeThickness() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
getOverrideEnvironment() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
getOverrideEnvironment() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
getOverrideEnvironment() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
getOverrideEnvironment() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
getOverrideEnvironment() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
getOverrideEnvironment() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
getOverrideEnvironment() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm
 
getOverrideEnvironment() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
getOverrideEnvironment() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
getOverrideEnvironment() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
getOverrideEnvironment() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
getOverrideEnvironment() - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingPythonScriptAlgorithm
 
getOverrideEnvironment() - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingPythonScriptAlgorithm
 
getOverrideEnvironment() - Method in class org.hkijena.jipipe.extensions.python.algorithms.PythonScriptAlgorithm
 
getOverrideEnvironment() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectCondaEnvPythonInstaller.Configuration
 
getOverrideEnvironment() - Method in class org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm
 
getOverrideEnvironment() - Method in class org.hkijena.jipipe.extensions.r.algorithms.IteratingRScriptAlgorithm
 
getOverrideEnvironment() - Method in class org.hkijena.jipipe.extensions.r.algorithms.MergingRScriptAlgorithm
 
getOverrideFillColor() - Method in class org.hkijena.jipipe.extensions.ij3d.utils.Roi3DDrawer
 
getOverrideFillColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
getOverrideFillColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
getOverrideFillColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
getOverrideFillColor() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
getOverrideLineColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
getOverrideLineColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
getOverrideLineColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
getOverrideLineColor() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
getOverrideLineWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
getOverrideLineWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
getOverrideLineWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
getOverrideLineWidth() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
getOverrideMeshColor() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm
 
getOverridePythonEnvironment() - Method in class org.hkijena.jipipe.extensions.cellpose.CellposeSettings
 
getOverridePythonEnvironment() - Method in class org.hkijena.jipipe.extensions.omnipose.OmniposeSettings
 
getOverrideResamplingFactor() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.Image3DRendererSettings
 
getOverrideVertexColor() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
getOverrideVertexColor() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
getOverrideVertexRadius() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
getOverrideVertexRadius() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
getOverwriteHeight() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
 
getOverwriteHeight() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingZeroImage
 
getOverwriteOutputBitDepth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
 
getOverwriteOutputBitDepth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingZeroImage
 
getOverwriteSizeC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawMaskAlgorithm
 
getOverwriteSizeC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawROIAlgorithm
 
getOverwriteSizeC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
 
getOverwriteSizeC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingZeroImage
 
getOverwriteSizeT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawMaskAlgorithm
 
getOverwriteSizeT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawROIAlgorithm
 
getOverwriteSizeT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
 
getOverwriteSizeT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingZeroImage
 
getOverwriteSizeZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawMaskAlgorithm
 
getOverwriteSizeZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawROIAlgorithm
 
getOverwriteSizeZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
 
getOverwriteSizeZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingZeroImage
 
getOverwriteWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
 
getOverwriteWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingZeroImage
 
getP() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm
 
getPair() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterKeyAccess
 
getPair() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterValueAccess
 
getParallelizationBatchSize() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm
 
getParallelizationBatchSize() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm
 
getParallelizationBatchSize() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm
 
getParallelizationBatchSize() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm
 
getParallelizationBatchSize() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm
 
getParallelizationBatchSize() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm
 
getParallelizationBatchSize() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm
 
getParallelizationBatchSize() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeParallelizedAlgorithm
Returns how many threads the actual algorithm requires.
getParallelizationBatchSize() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SpotDetectorNode
 
getParallelizationBatchSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.FrangiVesselnessFeatures
 
getParallelizationBatchSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
getParameter(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Gets a parameter by its key
getParameter(String, Class<T>) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection
Gets a parameter
getParameter() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter
 
getParameter(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameterEditorUI.ExternalEditor
 
getParameter(Class<T>) - Method in class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
Gets or creates a parameter instance.
getParameter(JIPipeParameterCollection, String, Class<T>) - Static method in class org.hkijena.jipipe.utils.ParameterUtils
Gets a parameter from a JIPipeParameterCollection
getParameterAccess() - Method in class org.hkijena.jipipe.api.environments.ExternalEnvironmentInstaller
 
getParameterAccess(String) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection
Gets an access instance to a parameter of the defined key
getParameterAccess() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameterEditorUI.ExternalEditor
 
getParameterAccess() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableEditorWindow
 
getParameterAccess() - Method in class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
Gets the parameter accessor
getParameterAnnotationsPrefix() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings
 
getParameterAnnotationsPrefix() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
getParameterChangedEventEmitter() - Method in class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection
 
getParameterChangedEventEmitter() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
 
getParameterChangedEventEmitter() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection
Emitter for changes in the parameter
getParameterChangedEventEmitter() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
 
getParameterChangedEventEmitter() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotDataSeries
 
getParameterChangedEventEmitter() - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
 
getParameterClass() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.io.DefaultSettingsIO
 
getParameterClass() - Method in interface org.hkijena.jipipe.extensions.ijtrackmate.io.SettingsIO
 
getParameterClass() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.io.SpotFeaturePenaltyParameterListSettingsIO
 
getParameterClass() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter
 
getParameterCollection() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.BeforeAddParameterEvent
 
getParameterCollection() - Method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry.Sheet
 
getParameterCollection() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.OMEAccessorTemplate
 
getParameterCollection() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameterEditorUI.ExternalEditor
 
getParameterCollection() - Method in class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
Gets the object that holds the parameter
getParameterData() - Method in class org.hkijena.jipipe.extensions.multiparameters.datatypes.ParametersData
 
getParameterHelp() - Method in class org.hkijena.jipipe.ui.components.FormPanel
 
getParameterIds() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.OMEAccessorTemplate
 
getParameterIdToArgIndexMap() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionFunction
Returns info about the parameter at index
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionOperator
Returns info about the parameter at index (left to right)
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionOperatorEntry
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.FirstIndexOfFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.GetFirstItemFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.GetItemFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.GetItemOrDefaultFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.GetLastItemFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.InvertFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.LastIndexOfFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.SliceAfterFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.SliceBeforeFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.SliceFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.SortAscendingArrayFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.SortDescendingArrayFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.SummarizeAnnotationsMapFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.collections.SummarizeMapFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.CreateHSBColorFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.CreateLABColorFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.CreateRGBColorFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.FalseColorsFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.HexToRGBFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.HSBToLABFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.HSBToRGBFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.LABToHSBFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.LABToRGBFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.RGBToHexFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.RGBToHSBFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.color.RGBToLABFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.ColumnOperationAdapterFunction
Returns info about the parameter at index
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.ContainsStringPredicateFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.control.CaseFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.control.IfElseExprFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.control.IfElseFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.control.WhereFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.convert.ToBooleanFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.convert.ToIntegerFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.convert.ToNumber2Function
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.convert.ToNumberFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.convert.ToStringFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.CopyNFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.EvaluateFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.ExpressionSequenceFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.filesystem.GetParentDirectoryFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.filesystem.GetPathNameFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.filesystem.IsDirectoryFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.filesystem.IsFileFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.filesystem.PathExistsFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.ForEachFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.functions.DefineUserFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.functions.EvaluateUserFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.GlobStringPredicateFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.LengthFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.math.ClampFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.math.DoubleToStringFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.math.IsFiniteFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.math.IsInfiniteFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.math.IsNaNFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.math.PercentageFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.math.RandomFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.math.RoundToDecimalsFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.quantities.QuantityConvertFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.quantities.QuantityGetUnitFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.quantities.QuantityGetValueFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.RemoveDuplicatesFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.RunFunctionFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.scripts.JavaScriptFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.scripts.JythonScriptFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.SequenceFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.AccumulateFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.CumulativeTransformArrayFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.PercentileFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.statistics.TransformArrayFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.EqualsStringPredicateFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.ExtractRegexMatchesFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.RegexStringPredicateFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringEndsWithPredicateFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringFirstIndexOfFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringFormatFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringJoinFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringLastIndexOfFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringRegexReplaceFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringReplaceFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringSliceBeforeFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringSliceFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringSplitFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringStartsWithPredicateFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringToLowerCaseFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringToUpperCaseFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringTruncateFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.SummarizeVariablesFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.VariableExistsFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.variables.GetVariableFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.variables.HasVariableFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.variables.SetMissingVariableFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.variables.SetVariableFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.variables.SetVariableIfFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.functions.variables.SetVariablesFunction
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.AdditionFunctionOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.ContainsOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.ContainsOperator2
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.ElementAccessOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.EqualityPredicateOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.InequalityPredicateOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.LogicalAndOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.LogicalNotOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.LogicalOrOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.LogicalXOrOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericDivideFunctionOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericExponentFunctionOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericGreaterThanOrEqualPredicateOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericGreaterThanPredicateOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericLessThanOrEqualPredicateOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericLessThanPredicateOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericModuloFunctionOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.NumericMultiplyFunctionOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.ResolveVariableOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.SubtractionFunctionOperator
 
getParameterInfo(int) - Method in class org.hkijena.jipipe.extensions.expressions.operators.VariableExistsOperator
 
getParameterKey() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameterEditorUI.ExternalEditor
 
getParameterKeyAssignments() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.PathsToJIPipeProjectParametersAlgorithm
 
getParameterKeyFilter() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.ExtractParametersAlgorithm
 
getParameterReferenceGroups() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection
 
getParameterReferencesChangedEventEmitter() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup
 
getParameterReferencesChangedEventEmitter() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection
 
getParameters() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
 
getParameters() - Method in class org.hkijena.jipipe.api.compat.ImageJDataExportOperation
 
getParameters() - Method in class org.hkijena.jipipe.api.grouping.JsonAlgorithm
 
getParameters() - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
getParameters() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccessGroup
 
getParameters() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccessGroupList
 
getParameters() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeCustomParameterCollection
Returns all parameters Please note that those parameters must be sourced in this collection.
getParameters() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
 
getParameters(JIPipeParameterCollection) - Static method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Accesses the parameters of a collection
getParameters() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
 
getParameters() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
getParameters() - Method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry
 
getParameters() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNode
 
getParameters() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo
 
getParameters() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNode
 
getParameters() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo
 
getParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OMEAccessorParameter
 
getParameters() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersAlgorithm
 
getParameters() - Method in class org.hkijena.jipipe.ui.parameterreference.GraphNodeParameterReferenceGroupCollectionEditorUI
 
getParameters() - Method in class org.hkijena.jipipe.ui.settings.JIPipeProjectInfoParameters
 
getParametersByPriority() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
 
getParametersData() - Method in class org.hkijena.jipipe.extensions.multiparameters.datatypes.ParametersDataViewer
 
getParameterSlot() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm
Returns the parameter slot if enabled
getParameterSlotAlgorithmSettings() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm
 
getParametersString() - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration
 
getParameterStructureChangedEventEmitter() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
getParameterStructureChangedEventEmitter() - Method in class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection
 
getParameterStructureChangedEventEmitter() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
 
getParameterStructureChangedEventEmitter() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection
Emitter for changes in the structure of parameters
getParameterStructureChangedEventEmitter() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotDataSeries
 
getParameterStructureChangedEventEmitter() - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
 
getParameterTable() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersTableAlgorithm
 
getParameterTable() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ModelChangedEvent
 
getParameterTable() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableEditorWindow
 
getParameterTree(boolean, Set<UUID>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Extracts all parameters as tree.
getParameterTree() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameterEditorUI.ExternalEditor
 
getParameterTree() - Method in class org.hkijena.jipipe.ui.parameterreference.GraphNodeParameterReferenceGroupCollectionEditorUI
 
getParameterTree() - Method in class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
 
getParameterTree() - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
getParameterTypeRegistry() - Method in class org.hkijena.jipipe.JIPipe
 
getParameterTypeRegistry() - Method in interface org.hkijena.jipipe.JIPipeService
 
getParameterTypes() - Static method in class org.hkijena.jipipe.JIPipe
 
getParameterUIChangedEventEmitter() - Method in class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection
 
getParameterUIChangedEventEmitter() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
 
getParameterUIChangedEventEmitter() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection
Emitter for changes in the parameter user interface
getParameterUIChangedEventEmitter() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotDataSeries
 
getParameterUIChangedEventEmitter() - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
 
getParent() - Method in class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents
 
getParent() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Gets the tree assigned as parent.
getParent() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
getParent() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun
 
getParent() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportContext
 
getParent() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters
 
getParent() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.GeneratedParameters
 
getParent() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterInputAccess
 
getParent() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterOutputAccess
 
getParent() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterParameterAccess
 
getParent() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
 
getParent() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterKeyAccess
 
getParent() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterValueAccess
 
getParent() - Method in class org.hkijena.jipipe.ui.components.icons.AnimatedIcon
 
getParent() - Method in class org.hkijena.jipipe.ui.components.icons.NewThrobberIcon
 
GetParentDirectoryFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.filesystem
 
GetParentDirectoryFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.filesystem.GetParentDirectoryFunction
 
getParentGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the graph this algorithm is located in.
getParentPath() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.RelativizeByParameter
 
getParentPathAnnotation() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotateWithPathProperties
 
getPassword() - Method in class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment
 
getPassword() - Method in class org.hkijena.jipipe.extensions.parameters.library.auth.PasswordParameter
 
getPath() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference
 
getPath() - Method in class org.hkijena.jipipe.api.JIPipeProjectDirectories.DirectoryEntry
 
getPath() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
getPath() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathDataSource
 
getPath() - Method in class org.hkijena.jipipe.extensions.filesystem.dataypes.PathData
 
getPath() - Method in class org.hkijena.jipipe.extensions.parameters.library.filesystem.FileChooserBookmark
 
getPath() - Method in class org.hkijena.jipipe.ui.components.PathEditor
 
getPathIOMode() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathFromUserDataSource
 
getPathMode() - Method in class org.hkijena.jipipe.ui.components.PathEditor
 
getPathName() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.RenameByString
 
GetPathNameFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.filesystem
 
GetPathNameFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.filesystem.GetPathNameFunction
 
getPaths() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathListDataSource
 
getPathType() - Method in class org.hkijena.jipipe.api.compat.ui.AbstractPathImageJDataExporterUI
 
getPathType() - Method in class org.hkijena.jipipe.api.compat.ui.AbstractPathImageJDataImporterUI
 
getPathType() - Method in class org.hkijena.jipipe.api.compat.ui.FileImageJDataExporterUI
 
getPathType() - Method in class org.hkijena.jipipe.api.compat.ui.FileImageJDataImporterUI
 
getPathType() - Method in class org.hkijena.jipipe.api.compat.ui.FolderImageJDataExporterUI
 
getPathType() - Method in class org.hkijena.jipipe.api.compat.ui.FolderImageJDataImporterUI
 
getPathType() - Method in class org.hkijena.jipipe.api.compat.ui.PathImageJDataExporterUI
 
getPathType() - Method in class org.hkijena.jipipe.api.compat.ui.PathImageJDataImporterUI
 
getPathType() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathFromUserDataSource
 
getPathType() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
getPenalty() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeaturePenaltyParameter
 
getPercent() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.AddSaltAndPepperNoise2DAlgorithm
 
getPercentile() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.PercentileThreshold8U2DAlgorithm
 
getPerformanceParameters() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
getPermissions() - Method in class org.hkijena.jipipe.api.JIPipeProjectMetadata
 
getPerpendicularVector(Vector3f) - Static method in class org.hkijena.jipipe.extensions.scene3d.utils.Scene3DUtils
 
getPersistence() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess
 
getPersistence() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
getPersistence() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Controls the persistence of the parameter
getPersistence() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
getPersistence() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
getPerSlotStatus() - Method in class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
getPhysicalDimensionT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm
 
getPhysicalDimensionT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm
 
getPhysicalDimensionT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm
 
getPhysicalDimensionTAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
getPhysicalDimensionValue() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm
 
getPhysicalDimensionValue() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm
 
getPhysicalDimensionValue() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm
 
getPhysicalDimensionValueAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
getPhysicalDimensionX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm
 
getPhysicalDimensionX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm
 
getPhysicalDimensionX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm
 
getPhysicalDimensionXAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
getPhysicalDimensionY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm
 
getPhysicalDimensionY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm
 
getPhysicalDimensionY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm
 
getPhysicalDimensionYAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
getPhysicalDimensionZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm
 
getPhysicalDimensionZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm
 
getPhysicalDimensionZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm
 
getPhysicalDimensionZAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
getPhysicalSizeX() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
getPhysicalSizeY() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
getPhysicalSizeZ() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
getPhysicalVoxelSizeX() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
getPhysicalVoxelSizeY() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
getPhysicalVoxelSizeZ() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
getPicker() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.NodeInfoDeselectedEvent
 
getPicker() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.NodeInfoSelectedEvent
 
getPicker() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.SelectedInfosChangedEvent
 
getPid() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ExtendedExecutor
 
getPid() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree
 
getPinToolBar() - Method in class org.hkijena.jipipe.extensions.tables.display.CachedTableViewerWindow
 
getPinToolBar() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
The toolbar where the window pin controls are added.
getPinToolBar() - Method in class org.hkijena.jipipe.ui.components.FlexContentPanel
 
getPipelineParameters() - Method in class org.hkijena.jipipe.api.JIPipeProject
Returns the global parameters for this pipeline
getPixel(ImageProcessor, int, int) - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.SourceWrapMode
 
getPixelCoordinate() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.PixelHoverEvent
 
getPixelFloat(ImageProcessor, int, int) - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.SourceWrapMode
 
getPixelHoverEventEmitter() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
getPixelSizeX(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
getPixelSizeY(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
getPixelSizeZ(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
getPixelThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.LinesHoughDetection2DAlgorithm
 
getPixelType() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
Returns the appropriate Java type that stores the pixel data.
getPlaceholderAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.UsePlaceholderForMissingDataAlgorithm
 
getPlaceholderTable() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm
Deprecated.
 
getPlaceholderTable() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm2
 
getPlainText() - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
getPlaneNumberAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
getPlaneStartLocation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ResliceAlgorithm
 
getPlotBuilderUI() - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesBuilder
 
getPlotDataType() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2AlgorithmInfo
 
getPlotNameAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
getPlotType() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTablesAlgorithm
Deprecated.
 
getPlotType() - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesBuilder
 
getPlotType() - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
 
getPlotTypeParameters() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2Algorithm
 
getPlotTypeParameters() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTablesAlgorithm
Deprecated.
 
getPlugin(Class<T>) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
getPlugin() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D.MaskChangedEvent
 
getPluginDirectory() - Static method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionLoaderPlugin
 
getPluginInfo() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
getPluginInfo() - Method in class org.hkijena.jipipe.JIPipeJavaExtensionInitializationInfo
 
getPluginManager() - Method in class org.hkijena.jipipe.ui.extensions.ActivateAndApplyUpdateSiteRun
 
getPluginManager() - Method in class org.hkijena.jipipe.ui.extensions.DeactivateAndApplyUpdateSiteRun
 
getPluginManager() - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager.UpdateSitesFailedEvent
 
getPluginManager() - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager.UpdateSitesReadyEvent
 
getPluginManager() - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManagerUI
 
getPluginManager() - Method in class org.hkijena.jipipe.ui.ijupdater.UpdateSiteListUI
 
getPluginResource(String) - Static method in class org.hkijena.jipipe.utils.ResourceUtils
Gets a plugin-internal resource as URL If you want to utilize resources from your Java extension, use JIPipeResourceManager
getPluginResourceAsStream(String) - Static method in class org.hkijena.jipipe.utils.ResourceUtils
Gets a plugin-internal resource as Stream
getPluginResourceAsString(String) - Static method in class org.hkijena.jipipe.utils.ResourceUtils
Gets a plugin resource as string
getPluginResourceInverted(String) - Static method in class org.hkijena.jipipe.utils.ResourceUtils
Gets a plugin-internal resource as URL If you want to utilize resources from your Java extension, use JIPipeResourceManager
getPlugins() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
getPlugins() - Method in class org.hkijena.jipipe.ui.extensions.ExtensionListPanel
 
getPlugins2D() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
getPlugins3D() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
getPluginService() - Method in class org.hkijena.jipipe.JIPipe
 
getPluginType() - Method in class org.hkijena.jipipe.extensions.imagej2.io.DefaultImageJ2JIPipeModuleIOService
 
getPopupMenu() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.DocumentTab
 
getPort() - Method in class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment
 
getPosition() - Method in class org.hkijena.jipipe.utils.ColorUtils.GradientStop
 
getPositionC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.ROIProperties
 
getPositionC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
getPositionC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
getPositionC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
getPositionC() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
getPositionT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.ROIProperties
 
getPositionT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
getPositionT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
getPositionT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
getPositionT() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
getPositionX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
getPositionX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
getPositionX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
getPositionX() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
getPositionY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
getPositionY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
getPositionY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
getPositionY() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
getPositionZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.ROIProperties
 
getPositionZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
getPositionZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
getPositionZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
getPositionZ() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
getPowerSpectrumMean() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo
 
getPreActivationIssues() - Method in class org.hkijena.jipipe.JIPipeRegistryIssues
 
getPredecessors() - Method in interface org.hkijena.jipipe.api.data.context.JIPipeDataContext
Gets the known predecessors
getPredecessors() - Method in class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext
 
getPredictionMapsDataAnnotation() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
getPreDownloadedArchivePath() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller.Configuration
 
getPreferredSize() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
getPreferredSize() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getPreferredSize() - Method in class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox
 
getPreferredSpan(int) - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Determines the preferred span for this view along an axis.
getPrefix() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.TemporaryFileDataSource
 
getPreprocessingScript() - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelIterating
 
getPreprocessingScript() - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelSimpleIterating
 
getPreprocessor() - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.AnnotateWithTextDataAlgorithm.Entry
 
getPreprocessor() - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.TextDataToTableAlgorithm.Entry
 
getPresets(Class<?>) - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry
Gets the presets of an environment
getPresets() - Method in class org.hkijena.jipipe.extensions.omero.OMEROSettings
 
getPresets() - Method in class org.hkijena.jipipe.extensions.processes.ProcessesExtensionSettings
 
getPresets() - Method in class org.hkijena.jipipe.extensions.python.PythonExtensionSettings
 
getPresets() - Method in class org.hkijena.jipipe.extensions.r.RExtensionSettings
 
getPresetsListInterface(Class<?>) - Method in interface org.hkijena.jipipe.api.environments.ExternalEnvironmentSettings
Returns the presets.
getPresetsListInterface(Class<?>) - Method in class org.hkijena.jipipe.extensions.omero.OMEROSettings
 
getPresetsListInterface(Class<?>) - Method in class org.hkijena.jipipe.extensions.processes.ProcessesExtensionSettings
 
getPresetsListInterface(Class<?>) - Method in class org.hkijena.jipipe.extensions.python.adapter.PythonAdapterExtensionSettings
 
getPresetsListInterface(Class<?>) - Method in class org.hkijena.jipipe.extensions.python.PythonExtensionSettings
 
getPresetsListInterface(Class<?>) - Method in class org.hkijena.jipipe.extensions.r.RExtensionSettings
 
getPretrainedModel() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
getPretrainedModel() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
getPretrainedModel() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
getPreviewHeight() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.misc.DataToPreviewAlgorithm
 
getPreviewSize() - Method in class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
getPreviewWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.misc.DataToPreviewAlgorithm
 
getPrimary1() - Method in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
Returns the primary 1 color.
getPrimary1() - Method in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
Returns the primary 1 color.
getPrimary2() - Method in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
Returns the primary 2 color.
getPrimary2() - Method in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
Returns the primary 2 color.
getPrimary3() - Method in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
Returns the primary 3 color.
getPrimary3() - Method in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
Returns the primary 3 color.
getPrimaryMenuLocation() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
A menu location that points towards the primary menu
getPriority() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
getPriority() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
getPriority() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool
 
getPriority() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
getPriority() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
getPriority() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess
 
getPriority() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
 
getPriority() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess
 
getPriority() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
getPriority() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Returns the priority for (de)serializing this parameter.
getPriority() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
getPriority() - Method in class org.hkijena.jipipe.extensions.graphannotation.tools.ArrowAnnotationGraphNodeTool
 
getPriority() - Method in class org.hkijena.jipipe.extensions.graphannotation.tools.GroupBoxAnnotationGraphNodeTool
 
getPriority() - Method in class org.hkijena.jipipe.extensions.graphannotation.tools.ImageBoxAnnotationGraphNodeTool
 
getPriority() - Method in class org.hkijena.jipipe.extensions.graphannotation.tools.TextBoxAnnotationGraphNodeTool
 
getPriority() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageBlendLayer
 
getPriority() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterItemParameterAccess
 
getPriority() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterInputAccess
 
getPriority() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterOutputAccess
 
getPriority() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterParameterAccess
 
getPriority() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
 
getPriority() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterKeyAccess
 
getPriority() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterValueAccess
 
getPriority() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableCellAccess
 
getPriority() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUIActiveArea
 
getProcess() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ExtendedExecutor
 
getProcess() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree
 
getProcessedCategories() - Method in class org.hkijena.jipipe.api.JIPipeMetadata
Returns the categories of the metadata; processed for ease of use If the categories list is empty, "Uncategorized" is returned
getProcessEnvironment() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessIteratingAlgorithm
 
getProcessEnvironment() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessMergingAlgorithm
 
getProcessID(Process) - Static method in class org.hkijena.jipipe.utils.ProcessUtils
Gets the process ID of a process
getProcessorParameters() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ApplyExpressionToColumnsAlgorithm
 
getProcessorParameters() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ConvertColumnsAlgorithm
 
getProcessorParameters() - Method in class org.hkijena.jipipe.extensions.tables.nodes.IntegrateColumnsAlgorithm
 
getProgress() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
getProgress() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo.StatusUpdatedEvent
 
getProgressEventEmitter() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
 
getProgressEventEmitter() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunWorker
 
getProgressInfo() - Method in class org.hkijena.jipipe.api.AbstractJIPipeRunnable
 
getProgressInfo() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation.ImportDataRun
 
getProgressInfo() - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeDataStorage
Returns the JIPipeProgressInfo instance where information is logged
getProgressInfo() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage
 
getProgressInfo() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage
 
getProgressInfo() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage
 
getProgressInfo() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPWriteDataStorage
 
getProgressInfo() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstaller
 
getProgressInfo() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo.StatusUpdatedEvent
 
getProgressInfo() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfoOutputStream
 
getProgressInfo() - Method in interface org.hkijena.jipipe.api.JIPipeRunnable
The info object that allows communication with the run
getProgressInfo() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.JIPipeLogger
 
getProgressInfo() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImagePlusResultImportRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.OMEImageResultImportRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.RawImage2DExporterRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Stack2DExporterRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Video2DExporterRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROGateway
 
getProgressInfo() - Method in class org.hkijena.jipipe.extensions.pipelinerender.RenderPipelineRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
 
getProgressInfo() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller
 
getProgressInfo() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectCondaEnvPythonInstaller
 
getProgressInfo() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectSystemPythonInstaller
 
getProgressInfo() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectVirtualEnvPythonInstaller
 
getProgressInfo() - Method in class org.hkijena.jipipe.extensions.r.installers.REnvInstaller
 
getProgressInfo() - Method in class org.hkijena.jipipe.JIPipe
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.ArchiveProjectRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToFilesByMetadataExporterRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToOutputExporterRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToZIPExporterRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.cache.importers.JIPipeImportCachedSlotOutputRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.documentation.DownloadOfflineManualRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.extensions.ActivateAndApplyUpdateSiteRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.extensions.DeactivateAndApplyUpdateSiteRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.ExtractTemplateZipFileRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.ijupdater.ActivateUpdateSiteRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.ijupdater.ApplyRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeProgressAdapter
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.ijupdater.RefreshRepositoryRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.project.LoadResultDirectoryIntoCacheRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.project.LoadResultZipIntoCacheRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.project.SaveProjectAndCacheToDirectoryRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.project.SaveProjectAndCacheToZipRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.quickrun.QuickRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun
 
getProgressInfo() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ExtendedExecutor
 
getProgressInfo() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree
 
getProject() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal
 
getProject() - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase
 
getProject() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Gets the JIPipeProject if this is a project or project compartment graph.
getProject() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun
 
getProject() - Method in class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplateBox
 
getProject(long, long) - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROGateway
Gets a project
getProject() - Method in class org.hkijena.jipipe.extensions.pipelinerender.RenderPipelineRun
 
getProject() - Method in class org.hkijena.jipipe.ui.ArchiveProjectRun
 
getProject() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
 
getProject() - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
 
getProject() - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWorkbench
 
getProject() - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWorkbenchPanel
 
getProject() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
 
getProject() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
getProject() - Method in interface org.hkijena.jipipe.ui.JIPipeProjectWorkbenchAccess
 
getProject() - Method in class org.hkijena.jipipe.ui.quickrun.QuickRun
The project where the run was created
getProject() - Method in class org.hkijena.jipipe.ui.settings.JIPipeProjectInfoParameters
 
getProjectCompartment() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Gets the project compartment instance of this node.
getProjectCompartmentTooltip(JIPipeProjectCompartment, JIPipeGraph) - Static method in class org.hkijena.jipipe.utils.TooltipUtils
Creates a tooltip for a project compartment
getProjectCompartmentUUID() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
 
getProjectDataDirs() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the currently accessible project data directories
getProjectDirectory() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the current project directory.
getProjectedAxis() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm
 
getProjectFile() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.RunJIPipeProjectAlgorithm
 
getProjectId() - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROProjectReferenceData
 
getProjectIds() - Method in class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROProjectReferenceDataSource
 
getProjectOpenedEventEmitter() - Method in class org.hkijena.jipipe.ui.documentation.RecentProjectsListPanel
 
getProjectPath() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItem
 
getProjectPath() - Method in class org.hkijena.jipipe.ui.documentation.RecentProjectsListPanel.ProjectOpenedEvent
 
getProjectSavePath() - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
 
getProjectSavePath() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
 
getProjectSessionId() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupSessionInfo
 
getProjectStoragePath() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupSessionInfo
 
getProjectTemplate() - Method in class org.hkijena.jipipe.extensions.settings.ProjectsSettings
 
getProjectTemplateDownloadRepositories() - Method in class org.hkijena.jipipe.extensions.settings.ProjectsSettings
 
getProjectTemplateRegistry() - Method in class org.hkijena.jipipe.JIPipe
 
getProjectTemplateRegistry() - Method in interface org.hkijena.jipipe.JIPipeService
 
getProjectType() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
getProjectType() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
 
getProjectUI() - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
 
getProjectUI() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
 
getProjectValidationMode() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
getProjectValidationMode() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
getProjectValidationMode() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm
 
getProjectValidationMode() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
getProjectValidationMode() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
getProjectWindow() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
getProjectWorkbench() - Method in interface org.hkijena.jipipe.ui.JIPipeProjectWorkbenchAccess
 
getProperties() - Method in class org.hkijena.jipipe.ui.components.FormPanel.FormPanelEntry
 
getPropertyFile() - Static method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
getPropertyFile() - Static method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry
 
getPropertyPanel() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
getPruneCyclesMethod() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.SkeletonToSimplifiedFilamentsFijiAlgorithm
 
getPruneCyclesMethod() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm
 
getPruneEndsMethod() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.SkeletonToSimplifiedFilamentsFijiAlgorithm
 
getPruneEndsMethod() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm
 
getPsf() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
getPushedEventEmitter() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox
 
getPythonAdapterLibraryEnvironment() - Method in class org.hkijena.jipipe.extensions.python.adapter.PythonAdapterExtensionSettings
 
getPythonAdapterPresets() - Method in class org.hkijena.jipipe.extensions.python.adapter.PythonAdapterExtensionSettings
 
getPythonDownloadURL() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller.Configuration
 
getPythonEnvironment() - Method in class org.hkijena.jipipe.extensions.cellpose.CellposeSettings
 
getPythonEnvironment() - Method in class org.hkijena.jipipe.extensions.omnipose.OmniposeSettings
 
getPythonEnvironment() - Method in class org.hkijena.jipipe.extensions.python.PythonExtensionSettings
 
getPythonExecutable() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller
 
getPythonExecutable() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectSystemPythonInstaller.Configuration
 
getPyTorchPipPackage() - Method in class org.hkijena.jipipe.extensions.cellpose.installers.PortableCellposeGPUEnvInstaller.Configuration
 
getQ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm
 
getQuerySlot() - Method in class org.hkijena.jipipe.ui.grapheditor.nodefinder.JIPipeNodeFinderDialogUI
 
getQueue() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGenerationRun
 
getQueue() - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase
 
getQueue() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
 
getR() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm
 
getR() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm
 
getR() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines.HoughLine
 
getRadius() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.binary.Watershed3DSplittingAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.SymmetryFilter3DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SeedSegmentationSettings
 
getRadius() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.DiamondImageJ2ShapeData
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.DiamondTipsImageJ2ShapeData
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HyperSphereImageJ2ShapeData
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurFilter2DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LaplacianOfGaussian2DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateStructureElement2DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateStructureElement3DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMaximumFilter2DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMinimumFilter2DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalVarianceFilter2DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.RemoveNaNFilter2DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyInternalGradient2DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm
 
getRadius() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint
 
getRadius0() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm
 
getRadius1() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm
 
getRadius2() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm
 
getRadiusIncrement() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
getRadiusX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm
 
getRadiusX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm
 
getRadiusX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm
 
getRadiusX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm
 
getRadiusX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm
 
getRadiusX() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
getRadiusXY() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.FindMaxima3DAlgorithm
 
getRadiusY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm
 
getRadiusY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm
 
getRadiusY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm
 
getRadiusY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm
 
getRadiusY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm
 
getRadiusY() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
getRadiusZ() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.FindMaxima3DAlgorithm
 
getRadiusZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm
 
getRadiusZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm
 
getRadiusZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm
 
getRadiusZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm
 
getRadiusZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm
 
getRadiusZ() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
getRankAt(int) - Method in class org.hkijena.jipipe.utils.search.RankedData
 
getRatio() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ExpandLabelsAlgorithm
 
getRatio() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
getRatio() - Method in class org.hkijena.jipipe.utils.AutoResizeSplitPane.FixedRatio
 
getRatio() - Method in class org.hkijena.jipipe.utils.AutoResizeSplitPane
 
getRawNode() - Static method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry
Gets the raw property files Json node
getRDownloadURL() - Method in class org.hkijena.jipipe.extensions.r.installers.REnvInstaller.Configuration
 
getReadyLabel() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
 
getRecentJsonExtensionProjects() - Method in class org.hkijena.jipipe.extensions.settings.ProjectsSettings
 
getRecentProjects() - Method in class org.hkijena.jipipe.extensions.settings.ProjectsSettings
 
getRectangle(Point, int, int) - Method in enum org.hkijena.jipipe.extensions.parameters.library.roi.Anchor
Reconstructs the rectangle from a location anchored inside
getRectangleCoordinates(Rectangle) - Method in enum org.hkijena.jipipe.extensions.parameters.library.roi.Anchor
Gets the coordinate inside given rectangle
getRectangles() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawOvalRoiAlgorithm
 
getRectangles() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm
 
getRectangles() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.AppendRectangularRoiAlgorithm
Deprecated.
 
getRectangles() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.DefineRectangularRoiAlgorithm
Deprecated.
 
getRectangles() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.ReferencedAppendRectangularRoiAlgorithm
Deprecated.
 
getRectangles() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.ReferencedDefineRectangularRoiAlgorithm
Deprecated.
 
getRedirectDocumentationTarget() - Method in class org.hkijena.jipipe.ui.components.FormPanel
 
getRedoSnapshot() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal
 
getRedoSnapshot() - Method in class org.hkijena.jipipe.api.history.JIPipeDummyGraphHistoryJournal
 
getRedoSnapshot() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Gets the snapshot for the next redo operation
getRedoSnapshot() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal
 
getRedThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
getReferenceColumns() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
getReferenceColumns() - Method in class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm
 
getReferenceModuleInstance() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNode
 
getReferencePosition() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Video2DExporterRun
 
getReferenceTextAnnotationColumns() - Method in class org.hkijena.jipipe.api.JIPipeDataBatchGenerationResult
 
getRegexString() - Method in class org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtraction
 
getRegisteredCategories() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
 
getRegisteredContextMenuActions() - Method in class org.hkijena.jipipe.ui.registries.JIPipeCustomMenuRegistry
Gets the registered context menu actions
getRegisteredDataTypes() - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Gets all registered data types
getRegisteredExpressionFunctions() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry
Registered expression functions.
getRegisteredExtensionIds() - Method in class org.hkijena.jipipe.JIPipe
 
getRegisteredExtensionIds() - Method in interface org.hkijena.jipipe.JIPipeService
 
getRegisteredExtensions() - Method in class org.hkijena.jipipe.JIPipe
 
getRegisteredExtensions() - Method in interface org.hkijena.jipipe.JIPipeService
 
getRegisteredItems() - Method in class org.hkijena.jipipe.api.registries.JIPipeUtilityRegistry
Returns a mutable map of all items
getRegisteredMenuExtensions() - Method in class org.hkijena.jipipe.ui.registries.JIPipeCustomMenuRegistry
 
getRegisteredNodeClasses() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
 
getRegisteredNodeInfos() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Gets the set of all known algorithms
getRegisteredParameters() - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry
 
getRegisteredSheets() - Method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry
 
getRegisteredSources() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
 
getRegisteredTableColumnOperations() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry
The registered column operations.
getRegisteredTemplates() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
 
getRegisteredTemplates() - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry
 
getRegisteredTools() - Method in class org.hkijena.jipipe.api.registries.JIPipeGraphEditorToolRegistry
 
getRegistry() - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry.TemplatesUpdatedEvent
 
getRegistry() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
 
getRegistry() - Method in interface org.hkijena.jipipe.JIPipeJavaPlugin
Returns the registry
getRegistry() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
 
getRegistry() - Method in class org.hkijena.jipipe.JIPipeService.ExtensionDiscoveredEvent
 
getRegistry() - Method in class org.hkijena.jipipe.JIPipeService.ExtensionRegisteredEvent
 
getRelativeFileNames() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileListDataSource
 
getRelativeFolderPaths() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderListDataSource
 
getRelativeInstallationPath() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstaller
Installation path relative to the ImageJ root
getRelativePaths() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathListDataSource
 
getRelativeX() - Method in enum org.hkijena.jipipe.extensions.parameters.library.roi.Anchor
 
getRelativeY() - Method in enum org.hkijena.jipipe.extensions.parameters.library.roi.Anchor
 
getRelevantParameterKeys() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
Finds the parameter keys that are relevant according to the current anchor setting The anchor key 'anchor' is not part of the result.
getRelevantParameterKeys() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
Finds the parameter keys that are relevant according to the current anchor setting The anchor key 'anchor' is not part of the result.
getRelevantParameters() - Method in enum org.hkijena.jipipe.extensions.parameters.library.roi.Anchor
 
getRemoveExistingAnnotationsFilter() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.OverwriteAnnotations
 
getRenameFunction() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SimplifyAnnotationsAlgorithm
 
getRenamingEntries() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameSingleColumnsAlgorithm
 
getRenamingEntries() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumns2Algorithm
 
getRenamingEntries() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumnsAlgorithm
Deprecated.
 
getRenamingEntries() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm
 
getRenamingItems() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RenameAnnotation
 
getRenamingItems() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RenameDataAnnotation
 
getRenderedHTML() - Method in class org.hkijena.jipipe.ui.components.markdown.MarkdownDocument
 
getRenderedHTMLText() - Method in class org.hkijena.jipipe.ui.components.markdown.MarkdownDocument
 
getRendererComponent(JXMultiThumbSlider) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.CustomGradientTrackRenderer
 
getRendererComponent(JXMultiThumbSlider) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.TrackRenderer
 
getRendererComponent(JXMultiThumbSlider) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl.TrackRenderer
 
getRendererComponent(JXMultiThumbSlider) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI.TrackRenderer
 
getRendererSettings() - Method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer3DUISettings
 
getRendererStatus() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
getRenderType() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.Image3DRendererSettings
 
getReplacements() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ReplaceLabelsAlgorithm
 
getReport() - Method in exception org.hkijena.jipipe.api.validation.JIPipeValidationRuntimeException
 
getReport() - Method in class org.hkijena.jipipe.ui.components.ReloadableValidityChecker
 
getRepositories() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstaller
This method should return all repositories that are available
getRepositories() - Method in class org.hkijena.jipipe.extensions.cellpose.installers.CellposeEasyInstaller
 
getRepositories() - Method in class org.hkijena.jipipe.extensions.ilastik.installers.IlastikEasyInstaller
 
getRepositories() - Method in class org.hkijena.jipipe.extensions.omnipose.installers.OmniposeEasyInstaller
 
getRepositories() - Method in class org.hkijena.jipipe.extensions.python.adapter.JIPipePythonAdapterLibraryEnvironmentInstaller
 
getRepositories() - Method in class org.hkijena.jipipe.extensions.python.installers.PythonEasyInstaller
 
getRepositories() - Method in class org.hkijena.jipipe.extensions.r.installers.REasyInstaller
 
getResamplingFactor() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D.ImageLoaderRun
 
getResamplingFactor(ImagePlus) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.Image3DRendererSettings
 
getResolution() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
getResourceAsStream(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
Gets a plugin-internal resource as stream
getResourceBasePath() - Static method in class org.hkijena.jipipe.utils.ResourceUtils
 
getResourceClass() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
getResourceClass() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
 
getResourcePath(String) - Static method in class org.hkijena.jipipe.utils.ResourceUtils
Gets an internal resource.
getResourceURL(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
Gets a plugin-internal resource as URL
getRestrictToChannels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.RemoveLUTAlgorithm
 
getRestrictToChannels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorMapAlgorithm
 
getRestrictToChannels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm
 
getRestrictToChannels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromImageAlgorithm
 
getRestrictToIndices() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm
 
getResultMap() - Method in class org.hkijena.jipipe.ui.datatracer.CollectTraceRun
 
getRExecutablePath() - Method in class org.hkijena.jipipe.extensions.r.REnvironment
 
getRibbon() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
getRibbon() - Method in class org.hkijena.jipipe.ui.components.FlexContentPanel
 
getRibbon() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableUI
 
getRibbon() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableUI
 
getRight() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
 
getRight() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.InnerMargin
 
getRight() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
getRightX() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
getRoi() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm
 
getRoi1Settings() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm
 
getRoi1Settings() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm
 
getRoi2Settings() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm
 
getRoi2Settings() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm
 
getRoiComment() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
getRoiComment() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
getRoiDrawer() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.settings.ImageViewerUIROI2DDisplaySettings
 
getRoiDrawer() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
getRoiFilterExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.FilteringParameters
 
GetRoiImageAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi
Wrapper around RoiManager
GetRoiImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.GetRoiImageAlgorithm
Instantiates a new node type.
GetRoiImageAlgorithm(GetRoiImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.GetRoiImageAlgorithm
Instantiates a new node type.
getRoiIndexColumn() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.SetROI3DMetadataFromTableAlgorithm
 
getRoiIndexColumn() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetROIMetadataFromTableAlgorithm
 
getRoiListControl() - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
getRoiListControl() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
getRoiManagerPlugin() - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3DSelectionContextPanel
 
getRoiManagerPlugin() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2DSelectionContextPanel
 
getRoiName() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
getRoiName() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
getRoiName() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode
 
getRoiName() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertTracksToRoiNode
 
getRoiName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.ROIProperties
 
getRoiName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
getRoiName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
getRoiName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
getRoiName() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
getRoiNameExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.LinesHoughDetection2DAlgorithm
 
getRoiProperties() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawOvalRoiAlgorithm
 
getRoiProperties() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm
 
getRoiProperties() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
getRoiProperties(Roi) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Returns the properties of a Roi as map
getRois() - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
getRois() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ThresholdingResult
 
getRois() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.OMEImageData
 
getRois() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedImagePlusDataViewerWindow.CustomDataLoader
 
getRois() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
getRoiToLabelTransformation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm
 
getRole() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
getRole() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
getRole() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
getRole() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
getRole() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
getRole() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry
 
getRollingBallRadius() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm
 
getRoot() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
 
getRotateTemplate() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
getRotationCenter(Tuple3d) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Copies the rotation center into the given Tuple3d.
getRotationDirection() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm
 
getRotationRange() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.register.RegisterRoiToImageByBrightnessAlgorithm
 
getRotations() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm
 
getRow() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeDataTableDataSource
The data slot row where the data is sourced
getRow() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeResultSlotDataSource
 
getRow() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeWeakDataTableDataSource
The data slot row where the data is sourced
getRow() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImagePlusResultImportRun
 
getRow() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.OMEImageResultImportRun
 
getRow(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
getRow() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.Index
 
getRow() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.RowBuilder
 
getRow() - Method in class org.hkijena.jipipe.ui.cache.JIPipeDataTableRowUI
 
getRow() - Method in class org.hkijena.jipipe.ui.components.FormPanel.FormPanelEntry
 
getRow(int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
Returns the location
getRow() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotPreview
 
getRow() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotRowUI
Returns the data row that is displayed
getRowAsDouble(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.DoubleArrayTableColumn
 
getRowAsDouble(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.FloatArrayTableColumn
 
getRowAsDouble(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RelabeledTableColumn
 
getRowAsDouble(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RowIndexTableColumn
 
getRowAsDouble(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.StringArrayTableColumn
 
getRowAsDouble(int) - Method in interface org.hkijena.jipipe.extensions.tables.datatypes.TableColumn
Returns the data entry as string
getRowAsDouble(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ZeroTableColumn
 
getRowAsDouble(int) - Method in class org.hkijena.jipipe.extensions.tables.TableColumnReference
 
getRowAsObject(int) - Method in interface org.hkijena.jipipe.extensions.tables.datatypes.TableColumn
Gets the data at the specified row as object
getRowAsString(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.DoubleArrayTableColumn
 
getRowAsString(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.FloatArrayTableColumn
 
getRowAsString(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RelabeledTableColumn
 
getRowAsString(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RowIndexTableColumn
 
getRowAsString(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.StringArrayTableColumn
 
getRowAsString(int) - Method in interface org.hkijena.jipipe.extensions.tables.datatypes.TableColumn
Returns the data entry as string
getRowAsString(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ZeroTableColumn
 
getRowAsString(int) - Method in class org.hkijena.jipipe.extensions.tables.TableColumnReference
 
getRowComparator(ResultsTableData) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.MeasurementColumnSortOrder
Creates a comparator for ResultsTableData rows that is equivalent to the column order in this object
getRowCount() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
getRowCount() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
getRowCount() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableMetadata
 
getRowCount() - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
 
getRowCount() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
 
getRowCount() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
getRowCount() - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantTableModel
 
getRowCount() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableModel
 
getRowCount() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
getRowCount() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableModel
 
getRowCount() - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerTableModel
 
getRowCount() - Method in class org.hkijena.jipipe.ui.ijupdater.FileTableModel
 
getRowCount_() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
NOT THREAD-SAFE
getRowCountAnnotation() - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm
 
getRowGenerator() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
 
getRowList() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
getRowList() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableMetadata
 
getRowList() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
getRowMergingStrategy() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnsToAnnotationsAlgorithm
 
getRowNormalization() - Method in class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSimpleAlgorithm
 
getRowNormalization() - Method in class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm
 
getRows() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
getRows() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.MontageToStackAlgorithm
 
getRows() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
getRows() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.DoubleArrayTableColumn
 
getRows() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.FloatArrayTableColumn
 
getRows() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RelabeledTableColumn
 
getRows(Collection<Integer>) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
getRows(int, int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Extracts rows
getRows() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RowIndexTableColumn
 
getRows() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.StringArrayTableColumn
 
getRows() - Method in interface org.hkijena.jipipe.extensions.tables.datatypes.TableColumn
Returns the number of rows that are existing (not generated)
getRows() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ZeroTableColumn
 
getRows() - Method in class org.hkijena.jipipe.extensions.tables.TableColumnReference
 
getRowStorageFolder() - Method in class org.hkijena.jipipe.api.data.JIPipeExportedDataAnnotation
This is a relative path pointing to the row storage folder of this data annotation The path is relative to the storage path of the parent data table
getRowStorageFolder() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImagePlusResultImportRun
 
getRowStorageFolder() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.OMEImageResultImportRun
 
getRowStorageFolder(JIPipeDataSlot, JIPipeDataTableMetadataRow, JIPipeExportedDataAnnotation) - Static method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotPreview
Returns the folder where the data is stored
getRowStorageFolder() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotRowUI
Returns the folder where the data is stored
getRowStoragePath(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
Gets the storage path of a data row from a result.
getRowStoragePath(Path, int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
Gets the storage path of the specified row
getRowStoragePath() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeResultSlotDataSource
 
getRScriptExecutablePath() - Method in class org.hkijena.jipipe.extensions.r.REnvironment
 
getRun() - Method in class org.hkijena.jipipe.api.JIPipeRunnable.EnqueuedEvent
 
getRun() - Method in class org.hkijena.jipipe.api.JIPipeRunnable.FinishedEvent
 
getRun() - Method in class org.hkijena.jipipe.api.JIPipeRunnable.InterruptedEvent
 
getRun() - Method in class org.hkijena.jipipe.api.JIPipeRunnable.ProgressEvent
 
getRun() - Method in class org.hkijena.jipipe.api.JIPipeRunnable.StartedEvent
 
getRun() - Method in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmSettingsPanel
 
getRun() - Method in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmWindow
 
getRun() - Method in class org.hkijena.jipipe.ui.quickrun.QuickRun
The run that runs the pipeline
getRun() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunWorker
 
getRunnerQueue() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue
 
getRunnerQueue() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
 
getRuntimeMillis() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunWorker
 
getRuntimePartition() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
 
getRuntimePartition(RuntimePartitionReferenceParameter) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun
 
getRuntimePartition(int) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun
 
getRuntimePartitionList() - Method in class org.hkijena.jipipe.ui.settings.JIPipeRuntimePartitionListCellRenderer
 
getRuntimePartitions() - Method in class org.hkijena.jipipe.api.JIPipeProject
 
getRuntimeProject() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
 
getRuntimeProject() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the current project associated with the current run
getSaturatedPixels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm
 
getSaturationThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
getScale() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
getScale() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
getScale2DAlgorithm() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm
 
getScaleFactor() - Method in class org.hkijena.jipipe.ui.components.ImageFrame
 
getScaleMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
 
getScaleMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.ImageParameters
 
getScaleRange() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.register.RegisterRoiToImageByBrightnessAlgorithm
 
getScales() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures
 
getScaleX() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
getScaleX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
getScaleX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
getScaleX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
getScaleX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ScaleRoiAlgorithm
 
getScaleX() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
getScaleY() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
getScaleY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
getScaleY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
getScaleY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
getScaleY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ScaleRoiAlgorithm
 
getScaleY() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
getScaling() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.SymmetryFilter3DAlgorithm
 
getScheduledActivateExtensionEventEmitter() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
getScheduledActivateExtensions() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
getScheduledDeactivateExtensionEventEmitter() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
getScheduledDeactivateExtensions() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
getScheduledRegistrationTasks() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
 
getScheduledSelection() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getSchemaBasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
 
getScore() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm.EdgeCandidate
 
getScore() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm.EdgeCandidate
 
getScore() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ThresholdingResult
 
getScore() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines.HoughLine
 
getScoreAccumulationExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ScoreParameters
 
getScoreExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ScoreParameters
 
getScoreParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
getScoringFunction() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
getScoringFunction() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
getScratchBaseDirectory() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Gets the scratch directory of the current run associated to this algorithm.
getScript() - Method in class org.hkijena.jipipe.extensions.r.algorithms.IteratingRScriptAlgorithm
 
getScript() - Method in class org.hkijena.jipipe.extensions.r.algorithms.MergingRScriptAlgorithm
 
getScriptParameters() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ModifyAnnotationScript
 
getScriptParameters() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SplitByAnnotationScript
 
getScriptParameters() - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelIterating
 
getScriptParameters() - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelSimpleIterating
 
getScriptParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsScriptAlgorithm
 
getScriptParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge.FilterAndMergeRoiByStatisticsScriptAlgorithm
 
getScriptParameters() - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingJythonScriptAlgorithm
 
getScriptParameters() - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingPythonScriptAlgorithm
 
getScriptParameters() - Method in class org.hkijena.jipipe.extensions.python.algorithms.JythonScriptAlgorithm
 
getScriptParameters() - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingJythonScriptAlgorithm
 
getScriptParameters() - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingPythonScriptAlgorithm
 
getScriptParameters() - Method in class org.hkijena.jipipe.extensions.python.algorithms.PythonScriptAlgorithm
 
getScriptParameters() - Method in class org.hkijena.jipipe.extensions.python.algorithms.SimpleIteratingJythonScriptAlgorithm
 
getScriptParameters() - Method in class org.hkijena.jipipe.extensions.tables.nodes.ModifyAndMergeTablesScript
 
getScriptParameters() - Method in class org.hkijena.jipipe.extensions.tables.nodes.ModifyTablesScript
 
getScriptParameters() - Method in class org.hkijena.jipipe.extensions.tables.nodes.TablesFromScript
 
getScrollPane() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
getScrollPane() - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantTableModel
 
getScrollPane() - Method in class org.hkijena.jipipe.ui.components.FormPanel
 
getScrollPane() - Method in class org.hkijena.jipipe.ui.components.markdown.MarkdownReader
 
getScrollPane() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableModel
 
getScrollPane() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
getScrollPane() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableModel
 
getScrollPane() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableUI
 
getScrollPane() - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerTableModel
 
getScrollPane() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getScrollPane() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
getSearchBox() - Method in class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox.SelectedEvent
 
getSearchField() - Method in class org.hkijena.jipipe.ui.documentation.JIPipeCompendiumUI
 
getSearchSettings() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
getSearchString(JIPipeNodeExample) - Method in class org.hkijena.jipipe.extensions.nodeexamples.JIPipeNodeExamplePickerDialog
 
getSearchString(T) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicEnumParameter
The search string used for the searchable mode
getSearchString(ImageJDataExporter) - Method in class org.hkijena.jipipe.ui.components.pickers.ImageJDataExporterPicker
 
getSearchString(ImageJDataImporter) - Method in class org.hkijena.jipipe.ui.components.pickers.ImageJDataImporterPicker
 
getSearchString(JIPipeParameterTypeInfo) - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeParameterTypeInfoPicker
 
getSearchString(T) - Method in class org.hkijena.jipipe.ui.components.pickers.PickerDialog
Gets the search string for the specified icon
getSearchStrings() - Method in class org.hkijena.jipipe.ui.components.search.SearchTextField
Returns the search strings according to the current text
getSecond() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceCube
 
getSecondary1() - Method in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
Returns the secondary 1 color.
getSecondary1() - Method in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
Returns the secondary 1 color.
getSecondary2() - Method in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
Returns the secondary 2 color.
getSecondary2() - Method in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
Returns the secondary 2 color.
getSecondary3() - Method in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
Returns the secondary 3 color.
getSecondary3() - Method in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
Returns the secondary 3 color.
getSecondColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm
 
getSeedSegmentationSettings() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm
 
getSeedSegmentationSettings() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.Watershed3DSegmentationAlgorithm
 
getSeedsThreshold() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm
 
getSeedsThreshold() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.Watershed3DSegmentationAlgorithm
 
getSegmentation() - Method in class org.hkijena.jipipe.extensions.ijweka.datatypes.WekaModelData
 
getSegmentationImageDataAnnotation() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
getSegmentationMethod() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm.SpotSegmentationSettings
 
getSegmentationOutputSettings() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
getSegmentationOutputSettings() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
getSegmentedChannel() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
getSegmentedChannel() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeChannelSettings
 
getSegmentResultsMethod() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
getSelectColorPrompt() - Method in class org.hkijena.jipipe.ui.components.ColorChooserButton
 
getSelectedColor() - Method in class org.hkijena.jipipe.ui.components.ColorChooserButton
 
getSelectedColumn() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableColumnToImageAlgorithm
 
getSelectedDataTypes() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker
 
getSelectedDataTypesChangedEventEmitter() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker
 
getSelectedEventEmitter() - Method in class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox
 
getSelectedFilamentsOrAll(String, String) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D
 
getSelectedFilamentsOrAll(String, String) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
getSelectedFile() - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
getSelectedFiles() - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
getSelectedIcon() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeIconPickerDialog
 
getSelectedIndices() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.SliceROIListAlgorithm
 
getSelectedIndices() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2
 
getSelectedInfo() - Method in class org.hkijena.jipipe.ui.components.AddAlgorithmSlotPanel
 
getSelectedInfo() - Method in class org.hkijena.jipipe.ui.components.AddParameterDialog
 
getSelectedInfo() - Method in class org.hkijena.jipipe.ui.components.EditAlgorithmSlotPanel
 
getSelectedInfos() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker
 
getSelectedInfosChangedEventEmitter() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker
 
getSelectedItem() - Method in class org.hkijena.jipipe.ui.components.PickDynamicEnumValueDialog
 
getSelectedItem() - Method in class org.hkijena.jipipe.ui.components.PickEnumValueDialog
 
getSelectedItem() - Method in class org.hkijena.jipipe.ui.components.pickers.PickerDialog
 
getSelectedItem() - Method in class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox
 
getSelectedNode() - Method in class org.hkijena.jipipe.ui.components.pickers.PickNodeDialog
 
getSelectedNodes() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getSelectedOutput() - Method in class org.hkijena.jipipe.ui.cache.JIPipeAlgorithmCacheBrowserOutputSelectorUI
 
getSelectedROIOrAll(String, String) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
getSelectedROIOrAll(String, String) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
getSelectedSlot() - Method in class org.hkijena.jipipe.ui.grapheditor.general.properties.JIPipeSlotEditorUI
 
getSelectedSources() - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesBuilder
Returns the currently selected sources.
getSelectedSpotsOrAll(String, String) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D
 
getSelectedTab() - Method in class org.hkijena.jipipe.ui.project.JIPipeProjectTabMetadata
 
getSelectedTask() - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon
 
getSelectedTemplate() - Method in class org.hkijena.jipipe.ui.project.JIPipeTemplateSelectionDialog
 
getSelectedTracksOrAll(String, String) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D
 
getSelection() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm
Deprecated.
 
getSelection() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getSelection() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
getSelectionByDialog(Component, Collection<T>, Collection<T>, String, String, ListCellRenderer<T>, ListSelectionMode) - Static method in class org.hkijena.jipipe.utils.UIUtils
Lets the user select one or multiple items from a list
getSelectionContextPanels() - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
getSelectionContextPanels() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D
 
getSelectionContextPanels() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
getSelectionContextPanels() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D
 
getSelectionContextPanels() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D
 
getSelectionContextPanels() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
getSelectionFontFamily() - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
getSelectionFontSize() - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
getSelectionForegroundColor() - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
getSelectorUI() - Method in class org.hkijena.jipipe.ui.cache.JIPipeAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEvent
 
getSelectTopN() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.LinesHoughDetection2DAlgorithm
 
getSeries() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
getSeriesAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
getSeriesBuilders() - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
 
getSeriesName() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2Algorithm
 
getSeriesName() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTablesAlgorithm
Deprecated.
 
getSeriesToImport() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
getSessionId() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItem
 
getSessionId() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItemCollection
 
getSessionId() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
 
getSettingClass() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.io.DefaultSettingsIO
 
getSettingClass() - Method in interface org.hkijena.jipipe.extensions.ijtrackmate.io.SettingsIO
 
getSettingClass() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.io.SpotFeaturePenaltyParameterListSettingsIO
 
getSettings() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
getSettings(Class<?>) - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry
Returns the settings instance
getSettings(String, Class<T>) - Method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry
Gets the settings instance with given ID
getSettings() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.ModelData
 
getSettings() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotDetectorData
 
getSettings() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotTrackerData
 
getSettings() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
getSettings() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.misc.RenderJIPipeProjectAlgorithm
 
getSettings() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
getSettings() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
getSettings() - Static method in class org.hkijena.jipipe.JIPipe
 
getSettings() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getSettings() - Method in class org.hkijena.jipipe.ui.quickrun.QuickRun
Settings for this quick run
getSettingsIOMap() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo
 
getSettingsIOMap() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo
 
getSettingsPanel() - Method in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmSettingsPanelIOEditor
 
getSettingsRegistry() - Method in class org.hkijena.jipipe.JIPipe
 
getSettingsRegistry() - Method in interface org.hkijena.jipipe.JIPipeService
 
getSettingsToParameterMap() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo
 
getSettingsToParameterMap() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo
 
getShadowColor() - Method in class org.hkijena.jipipe.ui.components.renderers.DropShadowRenderer
 
getShadowOpacity() - Method in class org.hkijena.jipipe.ui.components.renderers.DropShadowRenderer
 
getShadowSize() - Method in class org.hkijena.jipipe.ui.components.renderers.DropShadowRenderer
 
getShapeData() - Method in class org.hkijena.jipipe.extensions.imagej2.algorithms.CreateIJ2ShapeAlgorithm
 
getShapeParameters() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.TextBoxAnnotationGraphNode
 
getShapeType() - Method in class org.hkijena.jipipe.extensions.imagej2.algorithms.CreateIJ2ShapeAlgorithm
 
getSheetNameAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ResultsTableFromFile
 
getSheetNameExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm
Deprecated.
 
getSheetNameExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2
 
getSheets() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ResultsTableFromFile
 
getShortKey() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess
 
getShortKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
 
getShortKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess
 
getShortKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
getShortKey() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Returns a short form of the ID used, for example to generate a parameter string.
getShortKey() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
getShortKey() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterItemParameterAccess
 
getShortKey() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterInputAccess
 
getShortKey() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterOutputAccess
 
getShortKey() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterParameterAccess
 
getShortKey() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
 
getShortKey() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterKeyAccess
 
getShortKey() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterValueAccess
 
getShortKey() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableCellAccess
 
getShortName() - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ColumnOperationEntry
 
getShortName() - Method in enum org.hkijena.jipipe.utils.ImageJCalibrationMode
 
getShowAfterMinRuntime() - Method in class org.hkijena.jipipe.extensions.settings.NotificationUISettings
 
getSideBar() - Method in class org.hkijena.jipipe.ui.components.FlexContentPanel
 
getSideBar() - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
 
getSigma() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.AddNoise2DAlgorithm
 
getSigma() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm
 
getSigma() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
getSigma0X() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm
 
getSigma0Y() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm
 
getSigma1X() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm
 
getSigma1Y() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm
 
getSigmaX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.GaussianBlur2DAlgorithm
 
getSigmaX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm
 
getSigmaY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.GaussianBlur2DAlgorithm
 
getSigmaY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm
 
getSigmaZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionFunction
Returns the signature of the function
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionOperatorEntry
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.ContainsStringPredicateFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.control.IfElseExprFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.control.IfElseFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.GlobStringPredicateFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.EqualsStringPredicateFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.ExtractRegexMatchesFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.RegexStringPredicateFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringEndsWithPredicateFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringFirstIndexOfFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringJoinFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringLastIndexOfFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringRegexReplaceFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringReplaceFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringSliceBeforeFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringSliceFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringSplitFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringStartsWithPredicateFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringToLowerCaseFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringToUpperCaseFunction
 
getSignature() - Method in class org.hkijena.jipipe.extensions.expressions.functions.string.StringTruncateFunction
 
getSilencedExtensions() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry.Settings
 
getSimplifiedMinimalDependencies() - Method in class org.hkijena.jipipe.api.JIPipeProject
 
getSingletonTabInstances() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
 
getSingletonTabs() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
 
getSize() - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail
 
getSize() - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
getSizeAnnotation() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotateWithPathProperties
 
getSizeC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateZeroImage
 
getSizeC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateFromMathExpression2D
 
getSizeC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
 
getSizeC() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageDimensions
 
getSizeInfo() - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage
 
getSizeInfo() - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderPackage
 
getSizeT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateZeroImage
 
getSizeT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateFromMathExpression2D
 
getSizeT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
 
getSizeT() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageDimensions
 
getSizeZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateZeroImage
 
getSizeZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateFromMathExpression2D
 
getSizeZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
 
getSizeZ() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageDimensions
 
getSlice(TableColumn, List<Integer>) - Static method in interface org.hkijena.jipipe.extensions.tables.datatypes.TableColumn
Returns a new table column that contains the selected rows in the provided order
getSliceAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ImageToTableAlgorithm
 
getSliceAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.HistogramGenerator
 
getSliceCLocation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.Merge2DToHyperstackAlgorithm
 
getSliceFilter() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontage2Algorithm
 
getSliceIndex(int) - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
getSliceRange() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.DataSlicer
 
getSliceRange() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.IterationStepSlicer
 
getSliceStats(ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
getSlicesToImport() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
 
getSliceTLocation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.Merge2DToHyperstackAlgorithm
 
getSliceZero(ImagePlus, ImageSliceIndex) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Gets slice from image
getSliceZero(ImagePlus, int, int, int) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Gets slice from image
getSliceZeroSafe(ImagePlus, ImageSliceIndex) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Gets slice from image.
getSliceZeroSafe(ImagePlus, int, int, int) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Gets slice from image Will not trigger an IndexOutOfBoundsException
getSliceZLocation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.Merge2DToHyperstackAlgorithm
 
getSlicingMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.FrangiVesselnessFeatures
 
getSlot(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableMetadata
Gets the slot that defined the specified row
getSlot() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeResultSlotDataSource
 
getSlot() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph.GCEvent
 
getSlot() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImagePlusResultImportRun
 
getSlot() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.OMEImageResultImportRun
 
getSlot() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
getSlot() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotPreview
 
getSlot() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotRowUI
Returns the data slot
getSlotActiveArea(JIPipeDataSlot) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
getSlotConfiguration() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Gets the slot configuration
getSlotConfigurationChangedEventEmitter() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
getSlotConfigurationChangedEventEmitter() - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration
Emits events when the slots change
getSlotCount() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
getSlotEdges() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns all edges as set of edges
getSlotFilter() - Method in class org.hkijena.jipipe.extensions.parameters.api.graph.SlotMapParameterCollection
 
getSlotLabel() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
getSlotList() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
getSlotLocation(JIPipeDataSlot) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Returns the UI location of a data slot that is located in the graph
getSlotLocation(JIPipeDataSlot) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
Returns the location of a slot in relative coordinates
getSlotName() - Method in class org.hkijena.jipipe.api.data.sources.JIPipeCachedDataSlotDataSource
 
getSlotName() - Method in class org.hkijena.jipipe.api.validation.contexts.GraphNodeSlotValidationReportContext
 
getSlotName() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm
 
getSlotName() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
 
getSlotName() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
getSlotNodes() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
getSlots() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
getSlots() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun
 
getSlotStatus() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
getSlotStoragePath() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
Gets the storage path that is used during running the algorithm for saving the results This is not used during project creation
getSlotStore(int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
Gets the slot that defined the specified row
getSlotTable(Collection<JIPipeDataSlotInfo>) - Static method in class org.hkijena.jipipe.utils.TooltipUtils
Creates a slot definition table.
getSlotType() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
 
getSlotType() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
getSlotType() - Method in class org.hkijena.jipipe.api.validation.contexts.GraphNodeSlotValidationReportContext
 
getSlotType() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUIAddSlotButtonActiveArea
 
getSlotType() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
getSmallerMajor() - Method in class org.hkijena.jipipe.ui.grapheditor.general.connections.RectangularLine
 
getSmallerMinor() - Method in class org.hkijena.jipipe.ui.grapheditor.general.connections.RectangularLine
 
getSmartEdgeSlotBackground() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getSmartEdgeSlotForeground() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getSmoothing() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.Hessian2DAlgorithm
 
getSmoothing() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
getSmoothness() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry
 
getSmoothness() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
getSnapshots() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal
 
getSnapshots() - Method in class org.hkijena.jipipe.api.history.JIPipeDummyGraphHistoryJournal
 
getSnapshots() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Gets the list of all snapshots.
getSnapshots() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal
 
getSolution() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry
 
getSortedAndFilteredData(Collection<T>, Function<T, String>, RankingFunction<T>, String[]) - Static method in class org.hkijena.jipipe.utils.search.RankedData
Creates a list of sorted ranked data
getSortedDisplayOperationsFor(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Gets all import operations for a data type ID
getSortedImportOperationsFor(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Gets all import operations for a data type ID
getSortedList(Collection<Class<? extends JIPipeData>>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData
Gets name sorted list of data classes
getSortedList(Set<JIPipeNodeInfo>) - Static method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
Gets a sorted list of algorithms
getSortedRegisteredTemplates() - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry
 
getSortingLabelExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
getSortingLabelGenerator() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
getSortLabel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelledImage
 
getSortOrder() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm
 
getSortOrder() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm
 
getSortOrder() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByExpressionAlgorithm.SortEntry
 
getSortOrderList() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm
Deprecated.
 
getSortOrderList() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2
 
getSortOrderList() - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.SortTableRowsAlgorithm
 
getSortOrderList() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByAnnotationsAlgorithm
 
getSource() - Method in interface org.hkijena.jipipe.api.data.context.JIPipeDataContext
The ID of the creator of this context
getSource() - Method in class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext
 
getSource() - Method in class org.hkijena.jipipe.api.environments.JIPipeEnvironment
 
getSource() - Method in class org.hkijena.jipipe.api.events.AbstractJIPipeEvent
 
getSource() - Method in interface org.hkijena.jipipe.api.events.JIPipeEvent
The source of the event (set during the creation of the event)
getSource() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess
 
getSource() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
getSource() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeConnectedEvent
 
getSource() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeDisconnectedEvent
 
getSource() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphConnection
 
getSource() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.UserParameterDefinition
 
getSource() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
 
getSource() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess
 
getSource() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
getSource() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Gets the object that holds the parameter
getSource() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
getSource() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm.EdgeCandidate
 
getSource() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm.EdgeCandidate
 
getSource() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterItemParameterAccess
 
getSource() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterInputAccess
 
getSource() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterOutputAccess
 
getSource() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterParameterAccess
 
getSource() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
 
getSource() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterKeyAccess
 
getSource() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterValueAccess
 
getSource() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableCellAccess
 
getSource() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.ConnectHighlight
 
getSource() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
getSourceActions(JComponent) - Method in class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplateBoxTransferHandler
 
getSourceActions(JComponent) - Method in class org.hkijena.jipipe.extensions.nodetoolboxtool.NodeToolBoxTransferHandler
 
getSourceAnnotationFilter() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.OverwriteAnnotations
 
getSourceArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm
 
getSourceArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm
 
getSourceArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator
 
getSourceArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator
 
getSourceArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
getSourceArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator
 
getSourceArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm
 
getSourceArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm
 
getSourceArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm
 
getSourceArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm
 
getSourceArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm
 
getSourceArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm
 
getSourceArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm
 
getSourceCenter() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
getSourceCollapsed(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Gets information about if the source is collapsed
getSourceColumn() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumns2Algorithm.RenamingEntry
 
getSourceColumnName() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.IntegratingColumnOperationEntry
 
getSourceDocumentation(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Gets source documentation
getSourceDocumentationName(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Gets source name
getSourceInfo() - Method in class org.hkijena.jipipe.api.nodes.JIPipeNodeExample
An additional info label used by the UI.
getSourceKey(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Gets unique source key
getSourceNode() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphConnection
 
getSourceNode(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Returns the node of a collection
getSourceOf(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Returns the source that registered that data type
getSourceOf(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Returns the source that registered that data type
getSourceOf(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Returns the source of a registered algorithm
getSourcePoint() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
getSources() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisconnectHighlight
 
getSourceUI() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
getSourceUIOrder(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Gets source UI order
getSourceWrapMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression
 
getSpan() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData
 
getSpan() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData
 
getSpan() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData
 
getSpan() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.RectangleImageJ2ShapeData
 
getSpatialLocation() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
getSpatialLocationInUnit(String) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
getSplashIcons() - Method in class org.hkijena.jipipe.extensions.cellpose.CellposePlugin
 
getSplashIcons() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJPlugin
 
getSplashIcons() - Method in class org.hkijena.jipipe.extensions.core.CorePlugin
 
getSplashIcons() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.TrackMatePlugin
 
getSplashIcons() - Method in class org.hkijena.jipipe.extensions.ijweka.WekaPlugin
 
getSplashIcons() - Method in class org.hkijena.jipipe.extensions.ilastik.IlastikPlugin
 
getSplashIcons() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2Plugin
 
getSplashIcons() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesPlugin
 
getSplashIcons() - Method in class org.hkijena.jipipe.extensions.omero.OMEROPlugin
 
getSplashIcons() - Method in class org.hkijena.jipipe.extensions.omnipose.OmniposePlugin
 
getSplashIcons() - Method in class org.hkijena.jipipe.extensions.python.PythonPlugin
 
getSplashIcons() - Method in class org.hkijena.jipipe.extensions.r.RPlugin
 
getSplashIcons() - Method in interface org.hkijena.jipipe.JIPipeJavaPlugin
Returns icons that will be displayed in the splash screen.
getSplitCharacter() - Method in class org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtraction
 
getSplitPickedIndex() - Method in class org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtraction
 
getSpotDetectorFactory() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotDetectorData
 
getSpotDetectorFactory() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo
 
getSpotDetectors() - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackMateUtils
 
getSpotDrawer() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D
 
getSpotDrawer() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SpotsToRGBNode
 
getSpotDrawer() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.settings.ImageViewerUISpotsDisplaySettings
 
getSpotFeature(Spot, String, double) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotsCollectionData
Gets a feature of a spot.
getSpotFeatureRange(String) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotsCollectionData
Returns the range of values for a feature.
getSpots() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotsCollectionData
 
getSpotsCollection() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D
 
getSpotSegmentationSettings() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm
 
getSpotsListControl() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D
 
getSpotsManagerPlugin() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D.SelectionContextPanel
 
getSpotTrackerFactory() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo
 
getSpotTrackers() - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackMateUtils
 
getStackAssignments() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm
 
getStackIndexInSingleChannel(ImagePlus, int, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsAlgorithm
Deprecated.
 
getStackOrder() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
getStackOrder() - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
getStackPosition() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
The overall stack position of the ROIs.
getStackSizeAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
getStandardErrorLabel() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
Returns a standard error label that simplifies the creation of cache windows.
getStart() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry
 
getStartAt() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Reslicer
 
getStartedEventEmitter() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
 
getStartSlice() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm
 
getStartupExtensions() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
List of all extensions that are requested during startup Please note that this may not contain core extensions Use getActivatedExtensions() instead
getState() - Method in class org.hkijena.jipipe.ui.components.ribbon.CheckBoxAction
 
getState() - Method in class org.hkijena.jipipe.ui.components.ribbon.LargeToggleButtonAction
 
getState() - Method in class org.hkijena.jipipe.ui.components.ribbon.SmallToggleButtonAction
 
getStaticContentPanel() - Method in class org.hkijena.jipipe.ui.components.FormPanel
The panel that surrounds the scroll pane or content panel
getStaticFieldValue(String, Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
Gets the value of a field
getStatistics() - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.Measurement3DSettings
 
getStatistics() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MeasurementDrawerPlugin2D.Settings
 
getStatistics() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.Measurement2DSettings
 
getStatistics(List<ResultsTableData.IntegratingColumnOperationEntry>, Set<String>) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Generates a new table that contains statistics.
getStatisticsParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
getStatus() - Method in class org.hkijena.jipipe.api.JIPipeRunnable.ProgressEvent
 
getStatus() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Hough_Circle
 
getStatus() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D.UniverseInitializerRun
 
getStatusMessage() - Method in class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
getStatusUpdatedEventEmitter() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
getStepSize() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.NumberRangeParameterGenerator
 
getStitchThreshold() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationThresholdSettings
 
getStitchThreshold() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationThresholdSettings_Old
Deprecated.
 
getStitchThreshold() - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationThresholdSettings
 
getStopSlice() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm
 
getStorageDataTablePath() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
Only valid for slots generated by a JIPipeGraphRun.
getStorageDocumentation(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData
Returns the storage documentation for the data type or null if none was provided.
getStorageDocumentation() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
 
getStoragePath() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
The storage path is used in JIPipeGraphRun to indicate where output data is written This is only used internally
getStorageSchema(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData
Returns the URL pointing to a JSON schema that describes the storage of the data type.
getStorageSchema() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
 
getStore() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEvent
 
getStoredEventEmitter() - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache
 
getStoredEventEmitter() - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache
 
getStoredGridLocation() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
getStringBuilder() - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.RebuildReportRun
 
getStringFromClipboard() - Static method in class org.hkijena.jipipe.utils.UIUtils
Returns a string from clipboard or an empty string
getStringRepresentation() - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore
 
getStringValue() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.StringOrDouble
 
getStrokeColor() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer
 
getStrokeColor() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
getStrokeColorEdgeFeature() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
getStrokeColorFeature() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer
 
getStrokeColorMode() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
getStrokeColorTrackFeature() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
getStrokeDefault() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getStrokeDefaultBorder() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getStrokeHighlight() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getStrokeWidth() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer
 
getStrokeWidth() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
getStyle() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction
 
getStyleSheet() - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Convenience method to get the StyleSheet.
getSubFolder() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ListFiles
 
getSubFolder() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ListSubfolders
 
getSubPath() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ConcatenateByParameter
 
getSuffix() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.TemporaryFileDataSource
 
getSuggestedName() - Method in class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment
 
getSumColumnName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator
 
getSummary() - Method in class org.hkijena.jipipe.api.JIPipeMetadata
 
getSummary() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
A short summary
getT() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
 
getT() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndices
 
getTab() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.FormData.TabSettings
 
getTab() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.TabRenamedEvent
 
getTabAnnotation() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.IteratingFormProcessorAlgorithm
 
getTabAnnotation() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.MergingFormProcessorAlgorithm
 
getTabAnnotation() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.SimpleIteratingFormProcessorAlgorithm
 
getTabAnnotation() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.FormData.TabSettings
 
getTabbedPane() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
 
getTabbedPane() - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties.JIPipePipelineSingleAlgorithmSelectionPanelUI
 
getTabbedPane() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.properties.JIPipeSingleCompartmentSelectionPanelUI
 
getTabComponent() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.DocumentTab
 
getTabContainingContent(Component) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Returns the tab that contains the specified content
getTabContainingTabComponent(Component) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Returns the tab that contains the specified tab component
getTabCount() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
 
getTabLabelShiftX(int, int, boolean) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
Overridden to do nothing for the Java L&F.
getTabLabelShiftY(int, int, boolean) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
Overridden to do nothing for the Java L&F.
getTable() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
getTable() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableUI
 
getTable() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotPreview
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.extensions.forms.ui.DataBatchStatusTableCellRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantDataTableUI.BatchIndexCellRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantDataTableUI.WrapperColumnHeaderRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.ui.cache.JIPipeCachedDataViewerAnnotationInfoPanel.Renderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.ui.cache.JIPipeDataInfoCellRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.ui.components.renderers.JIPipeComponentCellRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableUI.WrapperColumnHeaderRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableUI.MultiDataSlotTableColumnRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerDataTableUI.WrapperColumnHeaderRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeAnnotationTableCellRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeDataSlotTableColumnHeaderRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeMergedDataSlotTableColumnHeaderRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeNodeTableCellRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeProjectCompartmentTableCellRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeRowDataAnnotationMergedTableCellRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeRowDataAnnotationTableCellRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeRowDataMergedTableCellRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeRowDataTableCellRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeRowIndexTableCellRenderer
 
getTableColumn() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column
 
getTableColumnOperationsOfType(Class<? extends ColumnOperation>) - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry
Returns all operations that are assignable to the filter class
getTableData() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.RowBuilder
 
getTableMergeSettings() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithAnnotationTable
 
getTableModel() - Method in class org.hkijena.jipipe.ui.tableeditor.TableEditor
 
getTableModelEvent() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ModelChangedEvent
 
getTableOperationRegistry() - Method in class org.hkijena.jipipe.JIPipe
 
getTableOperationRegistry() - Method in interface org.hkijena.jipipe.JIPipeService
 
getTableOperations() - Static method in class org.hkijena.jipipe.JIPipe
 
getTableRow() - Method in class org.hkijena.jipipe.api.data.JIPipeExportedDataAnnotation
 
getTables() - Method in class org.hkijena.jipipe.extensions.tables.nodes.DefineTablesAlgorithm
 
getTabPane() - Method in class org.hkijena.jipipe.extensions.multiparameters.datatypes.ParametersDataViewer
 
getTabPanelBorder() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
 
getTabPlacement() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
 
getTabRenamedEventEmitter() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.DocumentTab
 
getTabRunOverlay(int) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
getTabs() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
 
getTabsContaining(Class<? extends Component>) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Returns all tabs that contain components of provided type or components that inherit from it
getTabSettings() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.FormData
 
getTagExporter() - Method in class org.hkijena.jipipe.extensions.omero.nodes.manage.OMEROCreateDatasetAlgorithm
 
getTagExporter() - Method in class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROImageAlgorithm
 
getTagListAnnotation() - Method in class org.hkijena.jipipe.extensions.omero.parameters.AnnotationsToOMEROTagExporter
 
getTags(MetadataFacility, SecurityContext, DataObject) - Static method in class org.hkijena.jipipe.extensions.omero.util.OMEROUtils
 
getTagsToListAnnotation() - Method in class org.hkijena.jipipe.extensions.omero.parameters.OMEROTagToAnnotationImporter
 
getTagsToListFilter() - Method in class org.hkijena.jipipe.extensions.omero.parameters.OMEROTagToAnnotationImporter
 
getTagToAnnotationImporter() - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm
 
getTagToAnnotationImporter() - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm
 
getTagToAnnotationImporter() - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm
 
getTagToAnnotationImporter() - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROImageAlgorithm
 
getTagToAnnotationImporter() - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROTableAlgorithm
 
getTarget() - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata
 
getTarget() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeConnectedEvent
 
getTarget() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeDisconnectedEvent
 
getTarget() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphConnection
 
getTarget() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterCollectionContextAction
 
getTarget() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm.EdgeCandidate
 
getTarget() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm.EdgeCandidate
 
getTarget() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.ConnectHighlight
 
getTarget() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisconnectHighlight
 
getTarget() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
getTargetArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnnotateByImageStatisticsExpressionAlgorithm
 
getTargetArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm
 
getTargetArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm
 
getTargetArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm
 
getTargetArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.MergeImagesAlgorithm
 
getTargetArea() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.SimpleImageAndRoiIteratingAlgorithm
 
getTargetC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm
 
getTargetC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ReorderRoiDimensionsAlgorithm
 
getTargetCenter() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
getTargetChannel() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerLUTEditor
 
getTargetChannel() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerOpacityLUTEditor
 
getTargetColumnName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ImageToTableColumnAlgorithm
 
getTargetColumnName() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.IntegratingColumnOperationEntry
 
getTargetDimension() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm
 
getTargetDimension() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackCombinerAlgorithm
 
getTargetDimensionAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm
 
getTargetNode() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphConnection
 
getTargetNode() - Method in class org.hkijena.jipipe.ui.quickrun.QuickRun
The node targeted to be executed In project graph
getTargetNodeCopy() - Method in class org.hkijena.jipipe.ui.quickrun.QuickRun
Copy of the targeted node (in the run's graph)
getTargetPackage() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstaller
 
getTargetPackage() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerDialog
 
getTargetPackages() - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderDialog
 
getTargetPackages() - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderDialog
 
getTargetPoint() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
getTargetSlots() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SplitByAnnotation
 
getTargetT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm
 
getTargetT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ReorderRoiDimensionsAlgorithm
 
getTargetUI() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
getTargetZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm
 
getTargetZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ReorderRoiDimensionsAlgorithm
 
getTaskLabel() - Method in class org.hkijena.jipipe.api.backups.CollectBackupsRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.api.backups.PruneBackupsRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.api.cache.JIPipeCacheClearAllRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.api.cache.JIPipeCacheClearOutdatedRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation.ImportDataRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGenerationRun
 
getTaskLabel() - Method in interface org.hkijena.jipipe.api.JIPipeRunnable
A name for the runnable
getTaskLabel() - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseBuilderRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.cellpose.installers.CellposeEasyInstaller
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.cellpose.installers.MinicondaCellposeEnvInstaller
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.cellpose.installers.PortableCellposeEnvInstaller
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.ilastik.installers.IlastikEasyInstaller
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImagePlusResultImportRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.OMEImageResultImportRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D.ImageLoaderRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D.UniverseInitializerRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D.UpdateLutAndCalibrationRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.ApplyMultiOrthoSlicerRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.ApplyOrthoSlicerRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.RawImage2DExporterRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Stack2DExporterRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Video2DExporterRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.nodetoolboxtool.NodeToolBox.ReloadListRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.omnipose.installers.OmniposeEasyInstaller
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.pipelinerender.RenderPipelineRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.python.adapter.JIPipePythonAdapterLibraryEnvironmentInstaller
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.python.adapter.JIPipePythonAdapterUpdateChecker
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.python.installers.PythonEasyInstaller
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectCondaEnvPythonInstaller
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectSystemPythonInstaller
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectVirtualEnvPythonInstaller
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.r.installers.REasyInstaller
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.r.installers.REnvInstaller
 
getTaskLabel() - Method in class org.hkijena.jipipe.extensions.scene3d.utils.Scene3DToColladaExporter
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.ArchiveProjectToDirectoryRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.ArchiveProjectToZIPRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataExporterRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToFilesByMetadataExporterRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToOutputExporterRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToZIPExporterRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.cache.importers.JIPipeImportCachedSlotOutputRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.datatracer.CollectTraceRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.documentation.DownloadOfflineManualRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.extensions.ActivateAndApplyUpdateSiteRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.extensions.DeactivateAndApplyUpdateSiteRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.ExtractTemplateZipFileRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.grapheditor.nodefinder.JIPipeNodeFinderDialogUI.ReloadListRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.ijupdater.ActivateUpdateSiteRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.ijupdater.ApplyRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.ijupdater.RefreshRepositoryRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.RebuildReportRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.project.LoadResultDirectoryIntoCacheRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.project.LoadResultZipIntoCacheRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.project.SaveProjectAndCacheToDirectoryRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.project.SaveProjectAndCacheToZipRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.quickrun.QuickRun
 
getTaskLabel() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun
 
getTasks() - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon
 
getTasksFinishedLabel() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
 
getTaskSingleEnqueuedRunningLabel() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
 
getTaskSingleRunningLabel() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
 
gettAxis() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm
 
getTempDirectory() - Method in class org.hkijena.jipipe.extensions.settings.RuntimeSettings
 
getTemplate() - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionFunction
Returns a template function that can be used to get users started
getTemplate() - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionOperatorEntry
 
getTemplate() - Method in class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionList
Returns the template object for new items
getTemplateBasePath() - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
 
getTemplateDescription() - Method in class org.hkijena.jipipe.api.JIPipeProjectMetadata
 
getTemplateFile() - Method in class org.hkijena.jipipe.api.JIPipeProjectTemplate
 
getTemplateMap() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.OMEAccessorStorage
 
getTemplateMatchingMethod() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
getTemplatesUpdatedEventEmitter() - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry
 
getTemporaryDocument() - Method in class org.hkijena.jipipe.ui.components.markdown.MarkdownReader
 
getText() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData
 
getText() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData
 
getText() - Method in enum org.hkijena.jipipe.api.notifications.JIPipeNotificationAction.Style
 
getText() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
getText() - Method in class org.hkijena.jipipe.ui.components.FancyPasswordField
 
getText() - Method in class org.hkijena.jipipe.ui.components.FancyTextField
 
getText() - Method in class org.hkijena.jipipe.ui.components.ReadonlyCopyableTextField
 
getText() - Method in class org.hkijena.jipipe.ui.components.search.SearchTextField
 
getTextAnnotation(int, int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets an annotation at a specific index
getTextAnnotation(int, String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets an annotation at a specific column
getTextAnnotationColumnArray_(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets the annotation column or creates it DOES NOT ENSURE that the output size is equal to getRowCount() NOT THREAD-SAFE, REQUIRES A WRITE LOCK!
getTextAnnotationColumnNames() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
getTextAnnotationColumns() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
getTextAnnotationFilter() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PullDataTableAnnotations
 
getTextAnnotationFilter() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PushDataTableAnnotations
 
getTextAnnotationMap(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Returns annotations of a row as map
getTextAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableArchive
 
getTextAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableDirectory
 
getTextAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PullDataTableAnnotations
 
getTextAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PushDataTableAnnotations
 
getTextAnnotationMergeMode() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.ImportJIPipeSlotFolderAlgorithm
 
getTextAnnotationOr(int, String, JIPipeTextAnnotation) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Returns the annotation of specified type or the alternative value.
getTextAnnotations(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets the list of annotations for a specific data row
getTextAnnotations(Collection<Integer>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Gets the list of annotations for specific data rows
getTextAnnotations() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadataRow
 
getTextAnnotationsButton() - Method in class org.hkijena.jipipe.ui.cache.JIPipeDataTableRowUI
 
getTextColor() - Method in class org.hkijena.jipipe.extensions.core.nodes.JIPipeCommentNode
 
getTextColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings
 
getTextColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
getTextColor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings
 
getTextContent() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode
 
getTextDescription(StringBuilder, int) - Method in class org.hkijena.jipipe.api.JIPipeProject
Gets a description of the project as text
getTextDescription(StringBuilder, UUID, Map<UUID, Integer>, int) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Gets a description of the graph as text
getTextDescription(StringBuilder) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Gets a description of the node as text
getTextDescription() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeCustomTextDescriptionParameter
Gets the parameter as custom text description
getTextDescription() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
 
getTextDescription() - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
 
getTextDescription() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameter
 
getTextDescription() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameter
 
getTextDescription() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameter
 
getTextDescription() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRange
 
getTextDescriptionOf(Object) - Static method in interface org.hkijena.jipipe.api.parameters.JIPipeCustomTextDescriptionParameter
Get the text description of an object.
getTextField() - Method in class org.hkijena.jipipe.ui.components.FancyTextField
 
getTextField() - Method in class org.hkijena.jipipe.ui.components.ReadonlyCopyableTextField
 
getTextField() - Method in class org.hkijena.jipipe.ui.components.search.SearchTextField
 
getTextLocation() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode
 
getTextProcessor() - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.ProcessTextDataAlgorithm
 
getTextSettings() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
getTextSettings() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
getTextTitle() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode
 
getTheme() - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
getThemeFromRawSettings() - Static method in class org.hkijena.jipipe.utils.UIUtils
 
getTheta() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines.HoughLine
 
getThreadPool() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNodeRunContext
Gets the thread pool for parallelization
getThreads() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.RunJIPipeProjectAlgorithm
 
getThreshold() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.binary.DistanceMap3DAlgorithm
 
getThreshold() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.binary.ErodedVolumeFraction3DAlgorithm
 
getThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm
 
getThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm
 
getThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.MaskToRoiAlgorithm
 
getThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
getThreshold(JIPipeExpressionVariablesMap, ImageStatistics, boolean, TShortArrayList) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters
 
getThreshold(JIPipeExpressionVariablesMap, ImageStatistics, boolean, TFloatArrayList) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters
 
getThreshold(JIPipeExpressionVariablesMap, ImageStatistics, boolean, TByteArrayList) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters
 
getThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ThresholdingResult
 
getThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm
 
getThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm
 
getThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm
 
getThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm
 
getThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters
 
getThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm
 
getThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters
 
getThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm
 
getThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters
 
getThresholdAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm
 
getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm
 
getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm
 
getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm
 
getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm
 
getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm
 
getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm
 
getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm
 
getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm
 
getThresholdAnnotationStrategy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm
 
getThresholdCalculationExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm
 
getThresholdCalculationExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters
 
getThresholdCalculationExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm
 
getThresholdCalculationExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters
 
getThresholdCalculationExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm
 
getThresholdCalculationExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters
 
getThresholdCombinationExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm
 
getThresholdCombinationExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm
 
getThresholdCombinationExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters
 
getThresholdCombinationExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm
 
getThresholdCombinationExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters
 
getThresholdCombinationExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm
 
getThresholdCombinationExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters
 
getThresholdCombinationExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
getThresholdCriteriaExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.FilteringParameters
 
getThresholdMask(ImageProcessor, float) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.ImageJAlgorithmUtils
 
getThresholdMethod() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
getThresholdMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm
 
getThresholdMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm
 
getThresholdMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm
 
getThresholdMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm
 
getThresholdMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm
 
getThresholdMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm
 
getThresholdMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm
 
getThresholdParameters() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
getThresholdParameters() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
getThresholdParameters() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
getThresholdRegression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
getThresholds() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
getThumbnail() - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore
Gets the currently stored thumbnail
getThumbnail() - Method in class org.hkijena.jipipe.api.JIPipeMetadata
 
getThumbnail() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJPlugin
 
getThumbnail() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsPlugin
 
getThumbnail() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingPlugin
 
getThumbnail() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.TrackMatePlugin
 
getThumbnail() - Method in class org.hkijena.jipipe.extensions.ijweka.WekaPlugin
 
getThumbnail() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2Plugin
 
getThumbnail() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.ImageJAlgorithmsPlugin
 
getThumbnail() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesPlugin
 
getThumbnail() - Method in class org.hkijena.jipipe.extensions.omero.OMEROPlugin
 
getThumbnail() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Returns the thumbnail
getThumbnailGeneratedEventEmitter() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue
 
getThumbnails() - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata
 
getThumbRendererComponent(JXMultiThumbSlider, int, boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.CustomGradientThumbRenderer
 
getThumbRendererComponent(JXMultiThumbSlider, int, boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.ThumbRenderer
 
getThumbRendererComponent(JXMultiThumbSlider, int, boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl.ThumbRenderer
 
getThumbRendererComponent(JXMultiThumbSlider, int, boolean) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI.ThumbRenderer
 
getTightenedTo(PointRange, Point) - Static method in class org.hkijena.jipipe.utils.PointRange
Gets a point within the range that is closest to the target point
getTightenedTo(PointRange, PointRange) - Static method in class org.hkijena.jipipe.utils.PointRange
Gets a point within the range that is closest to the target point range
getTileHeight() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
getTileInsetXAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
getTileInsetXAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
getTileInsetXAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm
 
getTileInsetYAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
getTileInsetYAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
getTileInsetYAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm
 
getTileOverlap() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationPerformanceSettings_Old
Deprecated.
 
getTileRealXAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
getTileRealXAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
getTileRealXAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm
 
getTileRealYAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
getTileRealYAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
getTileRealYAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm
 
getTileSizeX() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling2DSettings
 
getTileSizeX() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling3DSettings
 
getTileSizeX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
getTileSizeX() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
getTileSizeY() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling2DSettings
 
getTileSizeY() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling3DSettings
 
getTileSizeY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
getTileSizeY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
getTileSizeZ() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling3DSettings
 
getTileWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
getTileXAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
getTileXAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
getTileYAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
getTileYAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
getTilingParameters() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaClassification3DAlgorithm
 
getTilingSettings() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaClassification2DAlgorithm
 
GetTimeHoursFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.datetime
 
GetTimeHoursFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.datetime.GetTimeHoursFunction
 
GetTimeMinutesFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.datetime
 
GetTimeMinutesFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.datetime.GetTimeMinutesFunction
 
getTimeout() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SleepAlgorithm
 
getTimePerFrame() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Video2DExporterRun
 
getTimer() - Method in class org.hkijena.jipipe.ui.components.icons.AnimatedIcon
 
getTimer() - Method in class org.hkijena.jipipe.ui.components.icons.NewThrobberIcon
 
GetTimeSecondsFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.datetime
 
GetTimeSecondsFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.datetime.GetTimeSecondsFunction
 
getTitle() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
getTitle() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry
 
getTitle() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
getTitle() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.DocumentTab
 
getTitle() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.SingletonTab
 
getTitleAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
getTitleAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ImagePlusFromFile
 
getTitleAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
getTitleAnnotation() - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROImageAlgorithm
 
getTitleFilterExpression() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ResultsTableFromGUI
 
getTitleFontSize() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
getTitleLabel() - Method in class org.hkijena.jipipe.ui.components.FormPanel.GroupHeaderPanel
 
getTitleLabel() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.DocumentTabComponent
 
getTitleStyle() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode
 
getToken(int) - Method in class org.hkijena.jipipe.api.nodes.database.WeightedTokens
 
getTokenList(Segment, int, int) - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluatorSyntaxTokenMaker
 
getTokenList(Segment, int, int) - Method in class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
Returns the first token in the linked list of tokens generated from text.
getTokens() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
getTokens() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
getTokens() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
getTokens() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
getTokens() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry
 
getTolerance() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm
 
getTool() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
getToolBar() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.algorithms.CachedTrackmateAlgorithmViewerWindow
 
getToolBar() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.trackscheme.TrackSchemeCachedDataViewerWindow
 
getToolBar() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
getToolBar() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
getToolBar() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
getToolBar() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerCacheDataViewerWindow
 
getToolBar() - Method in class org.hkijena.jipipe.extensions.multiparameters.datatypes.CachedParametersDataViewerWindow
 
getToolBar() - Method in class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplateBox
 
getToolBar() - Method in class org.hkijena.jipipe.extensions.nodetoolboxtool.NodeToolBox
 
getToolBar() - Method in class org.hkijena.jipipe.extensions.plots.CachedPlotViewerWindow
 
getToolBar() - Method in class org.hkijena.jipipe.extensions.strings.CachedTextViewerWindow
 
getToolBar() - Method in class org.hkijena.jipipe.extensions.tables.display.CachedTableViewerWindow
 
getToolBar() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
Returns the toolbar that contains
getToolBar() - Method in class org.hkijena.jipipe.ui.components.FlexContentPanel
 
getToolBar() - Method in class org.hkijena.jipipe.ui.components.markdown.MarkdownReader
 
getToolBar() - Method in class org.hkijena.jipipe.ui.components.PlotReader
 
getToolBar() - Method in class org.hkijena.jipipe.ui.components.UserFriendlyErrorUI
 
getToolBar() - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
getToolBar() - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
 
getToolChangedEventEmitter() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
getToolCursor() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.EllipseMaskDrawer2DTool
 
getToolCursor() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.FloodFillMaskDrawer2DTool
 
getToolCursor() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MouseMaskDrawer2DTool
 
getToolCursor() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PencilMaskDrawer2DTool
 
getToolCursor() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PolygonMaskDrawer2DTool
 
getToolCursor() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.RectangleMaskDrawer2DTool
 
getToolCursor() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIPicker2DTool
 
getToolCursor() - Method in interface org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2DTool
Cursor for the tool
getToolInfoDistance() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
getToolName() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawer2DTool
 
getToolName() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIPicker2DTool
 
getToolName() - Method in interface org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2DTool
Name of the tool
getTools() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
getTooltip() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
getTooltip() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool
 
getTooltip() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
getTooltip() - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool
 
getTooltip() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
getTooltip() - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
getTooltip(Object) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm.IterationModeEnumInfo
 
getTooltip() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
getTooltip(Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeColumnMatchingEnumInfo
 
getTooltip() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction
 
getTooltip(Object) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelColorMapEnumItemInfo
 
getTooltip(Object) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.BitDepthEnumItemInfo
 
getTooltip(Object) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.OptionalBitDepthEnumItemInfo
 
getTooltip(Object) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DefaultEnumItemInfo
 
getTooltip(Object) - Method in interface org.hkijena.jipipe.extensions.parameters.api.enums.EnumItemInfo
Extracts a custom tooltip for the enum value
getTooltip(Object) - Method in class org.hkijena.jipipe.extensions.parameters.library.colors.ColorMapEnumItemInfo
 
getTooltip(Object) - Method in class org.hkijena.jipipe.extensions.plots.utils.ColorMapEnumItemInfo
 
getTooltip(Object) - Method in class org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm.DatasetEnumItemInfo
 
getToolTipText(float, float, Shape) - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
For images the tooltip text comes from text specified with the ALT attribute.
getTop() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
 
getTop() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.InnerMargin
 
getTop() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
getTotalOverlapAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm
 
getTrack() - Method in class org.hkijena.jipipe.ui.grapheditor.general.layout.MSTGraphAutoLayoutMethod.Node
 
getTrackBackgroundGenerator() - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI.TrackRenderer
 
getTrackDisplayMode() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
getTrackDrawer() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D
 
getTrackDrawer() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TracksToRGBNode
 
getTrackDrawer() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.settings.ImageViewerUITracksDisplaySettings
 
getTrackerFactory() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotTrackerData
 
getTrackFeature(int, String, double) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
Gets a feature from a track.
getTrackFeatureRange(String) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
Returns the range of values for a feature.
getTrackIDAnnotation() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode
 
getTrackIds() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
 
getTrackModel() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
 
getTracksCollection() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D
 
getTracksListControl() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D
 
getTracksManagerPlugin() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D.SelectionContextPanel
 
getTrackSpots(int) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
 
getTrainingFeatures() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature2DSettings
 
getTrainingFeatures() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature3DSettings
 
getTransformation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyMath2DAlgorithm
 
getTransformation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyMathExpression2DAlgorithm
 
getTransformation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyTransform2DAlgorithm
 
getTransformation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm
 
getTranslateTranslation(Vector3d) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Retrieves the manual translation vector of the view.
getTree() - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchTree
 
getTree() - Method in class org.hkijena.jipipe.ui.cache.cachetree.JIPipeCacheTreePanel
 
getTree() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheBrowserUI
 
getTree() - Method in class org.hkijena.jipipe.ui.components.JIPipeProjectOutputTreePanel
 
getTree() - Method in class org.hkijena.jipipe.ui.components.ParameterTreeUI
 
getTree() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultAlgorithmTree
 
getTreeCellRendererComponent(JTree, Object, boolean, boolean, boolean, int, boolean) - Method in class org.hkijena.jipipe.ui.backups.BackupManagerTreeCellRenderer
 
getTreeCellRendererComponent(JTree, Object, boolean, boolean, boolean, int, boolean) - Method in class org.hkijena.jipipe.ui.cache.cachetree.JIPipeCacheStateTreeCellRenderer
 
getTreeCellRendererComponent(JTree, Object, boolean, boolean, boolean, int, boolean) - Method in class org.hkijena.jipipe.ui.components.ParameterTreeUI.Renderer
 
getTreeCellRendererComponent(JTree, Object, boolean, boolean, boolean, int, boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.properties.JIPipeDataSlotTreeCellRenderer
 
getTreeCellRendererComponent(JTree, Object, boolean, boolean, boolean, int, boolean) - Method in class org.hkijena.jipipe.ui.parameterreference.ParameterReferenceGroupCollectionTreeCellRenderer
 
getTreeCellRendererComponent(JTree, Object, boolean, boolean, boolean, int, boolean) - Method in class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeResultTreeCellRenderer
 
getTreeComponent() - Method in class org.hkijena.jipipe.ui.components.ParameterTreeUI
 
getTrueDataType() - Method in class org.hkijena.jipipe.api.data.JIPipeExportedDataAnnotation
ID of the data type stored in this data annotation
getTrueDataType() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadataRow
 
getTrueString() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.BooleanFormData
 
getTweaksSettings() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
getTweaksSettings() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
getType() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm
 
getType() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column
 
getType() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column
 
getType() - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage
 
getType() - Method in class org.hkijena.jipipe.extensions.python.PythonEnvironment
 
getType() - Method in class org.hkijena.jipipe.ui.parameters.DynamicParameterEditorDialog.ParameterEntry
 
getType() - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderPackage
 
getTypeAnnotation() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotateWithPathProperties
 
getTypeInfo(HDF5DataSetInformation) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.Hdf5Utils
 
getTypeName() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.BitDepth
 
getTypeName() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.OptionalBitDepth
 
getTypes() - Method in class org.hkijena.jipipe.extensions.expressions.ParameterInfo
 
getUi() - Method in class org.hkijena.jipipe.ui.grapheditor.general.layout.MSTGraphAutoLayoutMethod.Node
 
getUi() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI.DefaultNodeUIActionRequestedEvent
 
getUi() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI.NodeUIActionRequestedEvent
 
getUiAllowedParameterTypes() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeParameterTypeInfoRef
Non-serialized list of allowed parameter types.
getUIControlStyleType() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterEditorUI
 
getUIControlStyleType() - Method in class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionListEditorUI
 
getUIControlStyleType() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanParameterEditorUI
 
getUIControlStyleType() - Method in class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
Returns the "style" of the control.
getUIForResultSlot(JIPipeProjectWorkbench, JIPipeDataSlot, JIPipeDataTableMetadataRow) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Generates a UI for a result data slot
getUIInputSlotIcon(String) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm
 
getUIInputSlotIcon(String) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm
 
getUIInputSlotIcon(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
An icon that is displayed on the right-hand side of the input slot Can be null
getUIInputSlotIconBaseDimensions(String) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm
 
getUIInputSlotIconBaseDimensions(String) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm
 
getUIInputSlotIconBaseDimensions(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Size of the icon returned by getUIInputSlotIcon Should be at most 16x16 Defaults to 12x12
getUIManhattanDistance() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
getUIOrder() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory
 
getUIOrder() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess
 
getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory
 
getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory
 
getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory
 
getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory
 
getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory
 
getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory
 
getUIOrder() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory
 
getUIOrder() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory
Categories are sorted by this value (lower value = first)
getUIOrder() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
 
getUIOrder() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess
 
getUIOrder() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
getUIOrder() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Controls how the parameter is ordered within the user interface
getUiOrder() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
getUIOrder() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
getUIOrder() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsNodeTypeCategory
 
getUIOrder() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterItemParameterAccess
 
getUIOrder() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterInputAccess
 
getUIOrder() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterOutputAccess
 
getUIOrder() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterParameterAccess
 
getUIOrder() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
 
getUIOrder() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterKeyAccess
 
getUIOrder() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterValueAccess
 
getUIOrder() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableCellAccess
 
getUiRestrictToCompartments() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection
 
getUiShape() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphEdge
 
getUISlot() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotButtonActiveArea
 
getUISourceOrder(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Gets source UI order
getUiVisibility() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphEdge
 
getUnconnectedSlots() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
getUndoSnapshot() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal
 
getUndoSnapshot() - Method in class org.hkijena.jipipe.api.history.JIPipeDummyGraphHistoryJournal
 
getUndoSnapshot() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Gets the snapshot for the next undo operation
getUndoSnapshot() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal
 
getUnhiddenRegisteredDataTypes() - Static method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Returns a collection of all unhidden slot data types
getUnhiddenRegisteredDataTypes() - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Gets all data types that are not hidden
getUniqueKey(JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Gets the unique key of an parameter access
getUniqueStringByDialog(Component, String, String, Predicate<String>) - Static method in class org.hkijena.jipipe.utils.UIUtils
Continuously asks for an unique string
getUnit() - Method in class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 
getUniverse() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
getUniverse() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D.UniverseInitializerRun
 
getUniverse() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin3D
 
getUpdatedEventEmitter() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox
 
getUpdater() - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase
 
getUpdateSite(FilesCollection) - Method in class org.hkijena.jipipe.ui.extensions.UpdateSitePlugin
 
getUpdateSiteDependencies() - Method in class org.hkijena.jipipe.api.JIPipeProjectMetadata
 
getUpdateSiteDependenciesParameter() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
 
getUpdateSites() - Method in class org.hkijena.jipipe.ui.extensions.ActivateAndApplyUpdateSiteRun
 
getUpdateSites() - Method in class org.hkijena.jipipe.ui.extensions.DeactivateAndApplyUpdateSiteRun
 
getUpdateSites() - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager
 
getUpdateSitesFailedEventEmitter() - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager
 
getUpdateSitesReadyEventEmitter() - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager
 
getUpdateSitesToAddAndActivate() - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeImageJPluginManager
 
getUpdateSiteWrapperExtensions() - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager
 
getUpperThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
getUrl() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
getUrl() - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage
 
getUrl() - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROAnnotationReferenceData
 
getUrl() - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMERODatasetReferenceData
 
getUrl() - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROImageReferenceData
 
getUrl() - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROProjectReferenceData
 
getUrl() - Method in class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency
 
getUrl() - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderPackage
 
getUrlMultiPart() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
getUrls() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.DownloadFilesDataSource
 
getUseOutlinePaintForWhiskers() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Returns the flag that, if true, causes the whiskers to be drawn using the series outline paint.
getUser() - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROGateway
 
getUserName() - Method in class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment
 
getUtilitiesFor(Class<?>) - Method in class org.hkijena.jipipe.api.registries.JIPipeUtilityRegistry
 
getUtilityRegistry() - Method in class org.hkijena.jipipe.JIPipe
 
getUtilityRegistry() - Method in interface org.hkijena.jipipe.JIPipeService
 
getUuid() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentEdge
 
getUuid() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
getUUIDInParentGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns the UUID within the current graph.
getUUIDOf(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Gets the UUID of a node
getValidationExpression() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.DoubleFormData
 
getValidationExpression() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.IntegerFormData
 
getValidationExpression() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
getValidationExpression() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.StringFormData
 
getValidRuntimePartitionIndex(int) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun
 
getValue() - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
 
getValue(String, Class<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Gets a parameter value
getValue() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
getValue() - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionConstant
 
getValue() - Method in class org.hkijena.jipipe.extensions.expressions.TableColumnSourceExpressionParameter
 
getValue() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.BooleanFormData
 
getValue() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.DoubleFormData
 
getValue() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.EnumFormData
 
getValue() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.IntegerFormData
 
getValue() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
getValue() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.StringFormData
 
getValue() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
getValue() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
getValue() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeatureFilterParameter
 
getValue() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeatureFilterParameter
 
getValue() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.ByteConstantValueImageJ2OutOfBoundsFactoryData
 
getValue() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.DoubleConstantValueImageJ2OutOfBoundsFactoryData
 
getValue() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.FloatConstantValueImageJ2OutOfBoundsFactoryData
 
getValue() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.IntegerConstantValueImageJ2OutOfBoundsFactoryData
 
getValue() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.LongConstantValueImageJ2OutOfBoundsFactoryData
 
getValue() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.ShortConstantValueImageJ2OutOfBoundsFactoryData
 
getValue() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SetToValueAlgorithm
 
getValue() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyMath2DAlgorithm
 
getValue() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm.MetadataProperty
 
getValue() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator.GeneratedColumn
 
getValue() - Method in enum org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D.MaskColor
 
getValue() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.OrthoSliderPanel
 
getValue() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicEnumParameter
 
getValue() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameter
 
getValue() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRange
 
getValue() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.StringOrDouble
Returns the current value
getValue() - Method in class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 
getValue() - Method in class org.hkijena.jipipe.extensions.strings.datasources.StringDefinitionDataSource
 
getValue() - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2.Entry
 
getValue() - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnConversionParameter
 
getValue() - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnIntegrationParameter
 
getValue() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByExpressionAlgorithm.SortEntry
 
getValue() - Method in class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox.SelectedEvent
 
getValue() - Method in class org.hkijena.jipipe.utils.scripting.MacroSetting
 
getValueAsDouble(int, int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Returns a table value as double.
getValueAsDouble(int, String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Returns a table value as double
getValueAsString(int, int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Returns a table value as string
getValueAsString(int, String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Returns a table value as string
getValueAt(int, int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Returns the data.
getValueAt(int, int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
getValueAt(int, int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableMetadata
 
getValueAt(int, int) - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
 
getValueAt(int, int) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
 
getValueAt(int, int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
getValueAt(int, int) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantTableModel
 
getValueAt(int, int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableModel
 
getValueAt(int, int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
getValueAt(int, int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableModel
 
getValueAt(int, int) - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerTableModel
 
getValueAt(int, int) - Method in class org.hkijena.jipipe.ui.ijupdater.FileTableModel
 
getValueAxisFontSize() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CategoryPlotData
 
getValueAxisFontSize() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
getValueAxisLabel() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CategoryPlotData
 
getValueAxisLabel() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
getValueAxisMaximum() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CategoryPlotData
 
getValueAxisMaximum() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
getValueAxisMinimum() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CategoryPlotData
 
getValueAxisMinimum() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
getValueClass() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameter
 
getValueColumn() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm
 
getValueColumn() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.UnMeltTableAlgorithm
 
getValueColumns() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.MeltTableAlgorithm
 
getValueFilter() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
getValueMethod() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
getValues() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByIdAlgorithm
 
getValues() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column
 
getValues() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameter
 
GetVariableFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.variables
 
GetVariableFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.variables.GetVariableFunction
 
GetVariableKeysFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.variables
 
GetVariableKeysFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.variables.GetVariableKeysFunction
 
getVariableName() - Method in enum org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm.Dataset
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.JIPipeCustomAnnotationMatchingExpressionVariables
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByExpression.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SetSingleAnnotation.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.expressions.AnnotationGeneratorExpressionVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.expressions.AnnotationQueryExpressionVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.expressions.custom.JIPipeCustomExpressionVariablesParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.expressions.DataAnnotationQueryExpressionVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.expressions.DataRowQueryExpression.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in interface org.hkijena.jipipe.extensions.expressions.ExpressionParameterVariablesInfo
Returns the list of known variables for the user interface.
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeProjectDirectoriesVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.expressions.NumberQueryExpressionVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.expressions.NumericFunctionExpression.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.expressions.SingleExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.expressions.StringQueryExpressionVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.expressions.TableCellExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.expressions.TableCellValueExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.expressions.TableColumnSourceExpressionParameter.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.expressions.TableColumnValuesExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.expressions.variables.JIPipeTextAnnotationsExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.expressions.variables.PathFilterExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.expressions.variables.UndefinedExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.expressions.WindowQueryExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.ij3d.utils.AllROI3DMeasurementExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.ij3d.utils.AllROI3DRelationMeasurementExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurementExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurementExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentComponentVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentEdgeVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentUnconnectedEdgeVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertexVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotFeatureVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackFeatureVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackSpotFeatureVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConditionalInverterAlgorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression2DAlgorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression3DAlgorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelOverlapStatisticsVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiOverlapStatisticsVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm.GraphPostprocessingVariables
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ThresholdsExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Image5DSliceIndexExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.ImageQueryExpressionVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ColorPixel5DExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.GreyscalePixel5DExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.Image5DExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImagePlusPropertiesExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageStatistics5DExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.LocalPixelCoordinate5DExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.AllMeasurementExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.MeasurementExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.PixelCoordinate2DExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.PixelCoordinate5DExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.VectorPixel2DExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.VectorPixel5DExpressionParameterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRange.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTablesAlgorithm.VariablesInfo
Deprecated.
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.processes.ProcessEnvironment.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.python.PythonEnvironment.PythonArgumentsVariablesInfo
 
getVariables() - Method in class org.hkijena.jipipe.extensions.r.algorithms.IteratingRScriptAlgorithm
 
getVariables() - Method in class org.hkijena.jipipe.extensions.r.algorithms.MergingRScriptAlgorithm
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.r.REnvironment.RArgumentsVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.tables.nodes.filter.FilterTablesAlgorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm.CounterVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm.DefaultValuesVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm.VariablesInfo
Deprecated.
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.ProcessEnvironmentVariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.RunExpressionAlgorithm.VariablesInfo
 
getVariables(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.utils.EnvironmentVariablesSource
 
GetVariablesAsMapFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.variables
 
GetVariablesAsMapFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.variables.GetVariablesAsMapFunction
 
GetVariableValuesFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.variables
 
GetVariableValuesFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.variables.GetVariableValuesFunction
 
getvBarHeight() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
getVectorDimension() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.Warp2DAlgorithm
 
getVersion() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
getVersion() - Method in class org.hkijena.jipipe.api.environments.JIPipeEnvironment
 
getVersionString(Class<?>) - Static method in class org.hkijena.jipipe.utils.VersionUtils
Returns a version string for a class
getVertexMask() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
getVertexMask() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
getVertexMask() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ErodeEndVerticesAlgorithm
 
getVertexMask() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm
 
getVerticalBarSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
getVerticalBarSize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
getVerticalLabel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings
 
getVerticalLabel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings
 
getVertices() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DIndexedMeshGeometry
 
getVertices() - Method in interface org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DMeshGeometry
 
getVertices() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DUnindexedMeshGeometry
 
getVerticesIndex() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DIndexedMeshGeometry
 
getVerticesIndex() - Method in interface org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DMeshGeometry
 
getVerticesIndex() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DUnindexedMeshGeometry
 
getViewedImage(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
The image used by viewers
getViewerPanel() - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3DSelectionContextPanel
 
getViewerPanel() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D.SelectionContextPanel
 
getViewerPanel() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D.SelectionContextPanel
 
getViewerPanel() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D.SelectionContextPanel
 
getViewerPanel() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D.SelectionContextPanel
 
getViewerPanel() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin
 
getViewerPanel() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerWindow
 
getViewerPanel() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2DSelectionContextPanel
 
getViewerPanel() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Stack2DExporterRun
 
getViewerPanel() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Video2DExporterRun
 
getViewerPanel2D() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
getViewerPanel2D() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin2D
 
getViewerPanel3D() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin3D
 
getViewerRunnerQueue() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
getViewerRunnerQueue() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
getViewFactory() - Method in class org.hkijena.jipipe.ui.components.html.ExtendedHTMLEditorKit
 
getViewMode() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getViewMode() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
getViewPort() - Method in class org.hkijena.jipipe.ui.components.icons.ZoomIcon
 
getViewPort() - Method in class org.hkijena.jipipe.ui.components.ZoomViewPort.ZoomChangedEvent
 
getVirtualData(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Deprecated.
use getDataItemStore
getVirtualDataAnnotation(int, String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Deprecated.
use getDataAnnotationItemStore
getVirtualDataAnnotationMap(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Deprecated.
use getDataAnnotationItemStoreMap
getVirtualEnvDirectory() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectVirtualEnvPythonInstaller.Configuration
 
getVisibleCompartmentUUIDsOf(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Gets the compartment UUIDs where the node is also visible inside
getVisibleParameters() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionVisibilities
 
getVisitors() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterChangedEvent
 
getVisitors() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterStructureChangedEvent
 
getVisitors() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterUIChangedEvent
 
getvLabel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
getVolumeSimilarityAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm
 
getVoxelsThreshold() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.Watershed3DSegmentationAlgorithm
 
getWatchdog() - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog.CancelledEvent
 
getWebclientUrl() - Method in class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment
 
getWebsite() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
getWebsite() - Method in class org.hkijena.jipipe.api.JIPipeMetadata
 
getWebsite() - Method in class org.hkijena.jipipe.extensions.JIPipePrepackagedDefaultJavaPlugin
 
getWebsite() - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage
 
getWebsite() - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
 
getWebsite() - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderPackage
 
getWeight(int) - Method in class org.hkijena.jipipe.api.nodes.database.WeightedTokens
 
getWeight() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm
 
getWeight() - Method in class org.hkijena.jipipe.ui.grapheditor.general.layout.MSTGraphAutoLayoutMethod.Edge
 
getWeightDecay() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
getWeightDecay() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeTrainingTweaksSettings
 
getWeights() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.distribute.DistributeDataRandomlyByPercentageAlgorithm
 
getWhiskerWidth() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Returns the width of the whiskers as fraction of the bar width.
getWidth() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeEmptyThumbnailData
 
getWidth() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData
 
getWidth() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData
 
getWidth() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData
 
getWidth() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData
 
getWidth() - Method in interface org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailData
The width if hasSize() is true Otherwise, will return 0
getWidth() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGenerationRun
 
getWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap
 
getWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateZeroImage
 
getWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateFromMathExpression2D
 
getWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
 
getWidth() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
getWidth() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageDimensions
 
getWidth() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.SnapshotSettings
 
getWidth() - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
getWidth() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
getWidthAnnotation() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
getWindow() - Method in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmWindow
 
getWindow() - Method in class org.hkijena.jipipe.ui.events.WindowClosedEvent
 
getWindow() - Method in class org.hkijena.jipipe.ui.events.WindowOpenedEvent
 
getWindow() - Method in class org.hkijena.jipipe.ui.ijupdater.MissingRegistrationUpdateSiteResolver
 
getWindow() - Method in class org.hkijena.jipipe.ui.JIPipeDummyWorkbench
 
getWindow() - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWorkbench
 
getWindow() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
getWindow() - Method in interface org.hkijena.jipipe.ui.JIPipeWorkbench
Returns the window
getWindowFor(JIPipeProject) - Static method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
Tries to find the window that belongs to the provided project
getWordsToHighlight() - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluatorSyntaxTokenMaker
 
getWorkbench() - Method in class org.hkijena.jipipe.api.environments.ExternalEnvironmentInstaller
 
getWorkbench() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
getWorkbench() - Method in class org.hkijena.jipipe.extensions.forms.ui.FormsDialog
 
getWorkbench() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImagePlusResultImportRun
 
getWorkbench() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.OMEImageResultImportRun
 
getWorkbench() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
getWorkbench() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
getWorkbench() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
getWorkbench() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin
 
getWorkbench() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerWindow
 
getWorkbench() - Method in class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplateMenu
 
getWorkbench() - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderRun
 
getWorkbench() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameterEditorUI.ExternalEditor
 
getWorkbench() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableEditorWindow
 
getWorkbench() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
 
getWorkbench() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheManagerUI
 
getWorkbench() - Method in class org.hkijena.jipipe.ui.components.FlexContentWorkbenchPanel
 
getWorkbench() - Method in class org.hkijena.jipipe.ui.components.UserFriendlyErrorUI
 
getWorkbench() - Method in class org.hkijena.jipipe.ui.extension.GraphEditorToolBarButtonExtension
 
getWorkbench() - Method in class org.hkijena.jipipe.ui.extension.JIPipeMenuExtension
 
getWorkbench() - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager
 
getWorkbench() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getWorkbench() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbenchPanel
 
getWorkbench() - Method in interface org.hkijena.jipipe.ui.JIPipeWorkbenchAccess
 
getWorkbench() - Method in class org.hkijena.jipipe.ui.JIPipeWorkbenchPanel
 
getWorkbench() - Method in class org.hkijena.jipipe.ui.notifications.GenericNotificationButton
 
getWorkbench() - Method in class org.hkijena.jipipe.ui.notifications.NotificationButton
 
getWorkbench() - Method in class org.hkijena.jipipe.ui.parameters.DynamicParameterEditorDialog
 
getWorkbench() - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderRun
 
getWorkbench() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsButton
 
getWorkbench() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
 
getWorkDirectory() - Method in class org.hkijena.jipipe.api.JIPipeProject
Gets the folder where the project is currently working in
getWorkDirectory() - Method in class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
getWorker() - Method in class org.hkijena.jipipe.api.JIPipeRunnable.EnqueuedEvent
 
getWorker() - Method in class org.hkijena.jipipe.api.JIPipeRunnable.FinishedEvent
 
getWorker() - Method in class org.hkijena.jipipe.api.JIPipeRunnable.InterruptedEvent
 
getWorker() - Method in class org.hkijena.jipipe.api.JIPipeRunnable.ProgressEvent
 
getWorker() - Method in class org.hkijena.jipipe.api.JIPipeRunnable.StartedEvent
 
getWrapMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.Warp2DAlgorithm
 
getWrappedGraph() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
getWrappedGraph() - Method in class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents
 
getWrappedStream() - Method in class org.hkijena.jipipe.utils.UnclosableInputStream
 
getWrappedStream() - Method in class org.hkijena.jipipe.utils.UnclosableOutputStream
 
getWriteToAnnotation() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.RunExpressionAlgorithm
 
getWriteToAnnotationMergeStrategy() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.RunExpressionAlgorithm
 
getX() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.Point3d
 
getX() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.MultiOrthoSlicerSettings
 
getX() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint
 
getxAxis() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.CanvasEqualizer
 
getxAxis() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm
 
getxAxis() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm
 
getxAxis() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
 
getxAxis() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm
 
getxAxisFontSize() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
 
getxAxisLabel() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
 
getxAxisMaximum() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
 
getxAxisMinimum() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
 
getXDir(Vector3d) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Transforms the x-direction of the image plate to a normalized vector representing this direction in the vworld space.
getXDir(Vector3d, Transform3D) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Transforms the x-direction of the image plate to a normalized vector representing this direction in the vworld space.
getXMax(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
getXMin(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
getxPath() - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.AnnotateWithXPathDataAlgorithm.Entry
 
getxPath() - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractTextFromXMLAlgorithm
 
getxPath() - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm.Entry
 
getXyAnchor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm
 
getXyAnchor() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
getXYSliceDims(long[]) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.Hdf5Utils
 
getXyStep() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.register.RegisterRoiToImageByBrightnessAlgorithm
 
getY() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.Point3d
 
getY() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.MultiOrthoSlicerSettings
 
getY() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint
 
getyAxis() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.CanvasEqualizer
 
getyAxis() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm
 
getyAxis() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm
 
getyAxis() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
 
getyAxis() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm
 
getyAxisFontSize() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
 
getyAxisLabel() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
 
getyAxisMaximum() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
 
getyAxisMinimum() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
 
getYDir(Vector3d) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Stores the y-direction in the image plate coordinate system, i.e. the direction towards the user, in the given Vector3d.
getYDir(Vector3d, Transform3D) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Transforms the y-direction of the image plate to a normalized vector representing this direction in the vworld space.
getYMax(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
getYMin(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
getZ() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.Point3d
 
getZ() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
 
getZ() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndices
 
getZ() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.MultiOrthoSlicerSettings
 
getZ() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint
 
getzAxis() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm
 
getzAxis() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm
 
getZDir(Vector3d) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Transforms the z-direction of the image plate to a normalized vector representing this direction in the vworld space.
getZDir(Vector3d, Transform3D) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Transforms the z-direction of the image plate to a normalized vector representing this direction in the vworld space.
getZipFile() - Method in class org.hkijena.jipipe.api.JIPipeProjectTemplate
 
getZMax(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
getZMin(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
getZoom() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
getZoom() - Method in interface org.hkijena.jipipe.ui.components.ZoomViewPort
 
getZoom() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getZoom() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
getZoomBaseSpeed() - Method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer2DUISettings
 
getZoomChangedEventEmitter() - Method in interface org.hkijena.jipipe.ui.components.ZoomViewPort
 
getZoomChangedEventEmitter() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
getZoomDynamicSpeed() - Method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer2DUISettings
 
getZoomedDummyCanvas() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
A dummy ImageCanvas that is needed by some visualization algorithms for magnification It is updated by ImageViewerPanelCanvas2D Please do not make any changes to the display properties here, as the image viewer has its own canvas
getZoomedHitArea() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUIActiveArea
 
getZoomedHitAreaCenter() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUIActiveArea
 
getZoomTranslation(Vector3d) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Retrieves the translation vector which is responsible for the current zooming and stores it in the given Vector3d.
getzOrder() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode
 
GlobStringPredicateFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
GlobStringPredicateFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.GlobStringPredicateFunction
 
gotoNextRow() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
 
goToSnapshot(JIPipeHistoryJournalSnapshot, UUID) - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal
 
goToSnapshot(JIPipeHistoryJournalSnapshot, UUID) - Method in class org.hkijena.jipipe.api.history.JIPipeDummyGraphHistoryJournal
 
goToSnapshot(JIPipeHistoryJournalSnapshot, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Attempts to go to a specified snapshot
goToSnapshot(JIPipeHistoryJournalSnapshot, UUID) - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal
 
GradientStop() - Constructor for class org.hkijena.jipipe.utils.ColorUtils.GradientStop
 
GradientStop(float, Color) - Constructor for class org.hkijena.jipipe.utils.ColorUtils.GradientStop
 
GradientStop(ColorUtils.GradientStop) - Constructor for class org.hkijena.jipipe.utils.ColorUtils.GradientStop
 
GRAPH_TOOL_CURSOR_FONT - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
GraphAnnotationPlugin - Class in org.hkijena.jipipe.extensions.graphannotation
 
GraphAnnotationPlugin() - Constructor for class org.hkijena.jipipe.extensions.graphannotation.GraphAnnotationPlugin
 
GraphAnnotationsNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories
 
GraphAnnotationsNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory
 
GraphAutoLayout - Enum in org.hkijena.jipipe.ui.grapheditor.general.layout
 
GraphAutoLayoutMethod - Interface in org.hkijena.jipipe.ui.grapheditor.general.layout
 
GraphCanvasUpdatedEvent(JIPipeGraphCanvasUI) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.GraphCanvasUpdatedEvent
 
GraphCanvasUpdatedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.GraphCanvasUpdatedEventEmitter
 
GraphChangedEvent(JIPipeGraph) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.GraphChangedEvent
 
GraphChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.GraphChangedEventEmitter
 
GraphCompartmentCopyNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard
 
GraphCompartmentCopyNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentCopyNodeUIContextAction
 
GraphCompartmentCutNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard
 
GraphCompartmentCutNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentCutNodeUIContextAction
 
GraphCompartmentPasteNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard
 
GraphCompartmentPasteNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentPasteNodeUIContextAction
 
GraphEditorToolBarButtonExtension - Class in org.hkijena.jipipe.ui.extension
 
GraphEditorToolBarButtonExtension(JIPipeGraphEditorUI) - Constructor for class org.hkijena.jipipe.ui.extension.GraphEditorToolBarButtonExtension
Creates a new instance
graphEditorToolBarButtonExtensionsFor(JIPipeGraphEditorUI) - Method in class org.hkijena.jipipe.ui.registries.JIPipeCustomMenuRegistry
 
GraphEditorUISettings - Class in org.hkijena.jipipe.extensions.settings
All settings for JIPipeGraphEditorUI
GraphEditorUISettings() - Constructor for class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
GraphEditorUISettings.AlgorithmFinderSettings - Class in org.hkijena.jipipe.extensions.settings
 
GraphEditorUISettings.SearchSettings - Class in org.hkijena.jipipe.extensions.settings
 
GraphNodeParameterCollectionReference - Class in org.hkijena.jipipe.api.grouping.parameters
 
GraphNodeParameterCollectionReference() - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterCollectionReference
 
GraphNodeParameterReference - Class in org.hkijena.jipipe.api.grouping.parameters
References a parameter in a graph
GraphNodeParameterReference() - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference
Creates a new empty instance
GraphNodeParameterReference(GraphNodeParameterReference) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference
Creates a copy
GraphNodeParameterReference(JIPipeParameterAccess, JIPipeParameterTree) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference
Instantiates with an existing access within a tree
GraphNodeParameterReferenceAccess - Class in org.hkijena.jipipe.api.grouping.parameters
A parameter access that references to another one, but hides the source
GraphNodeParameterReferenceAccess(GraphNodeParameterReference, JIPipeParameterTree, JIPipeParameterCollection, boolean) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess
Creates a new instance
GraphNodeParameterReferenceAccessGroup - Class in org.hkijena.jipipe.api.grouping.parameters
GraphNodeParameterReferenceAccessGroup(GraphNodeParameterReferenceGroup) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccessGroup
Creates a new instance
GraphNodeParameterReferenceAccessGroupList - Class in org.hkijena.jipipe.api.grouping.parameters
GraphNodeParameterReferenceAccessGroupList(GraphNodeParameterReferenceGroupCollection, JIPipeParameterTree, boolean) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccessGroupList
Creates a new instance
GraphNodeParameterReferenceGroup - Class in org.hkijena.jipipe.api.grouping.parameters
GraphNodeParameterReferenceGroup() - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup
Creates a new instance
GraphNodeParameterReferenceGroup(GraphNodeParameterReferenceGroup) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup
Creates a copy
GraphNodeParameterReferenceGroupCollection - Class in org.hkijena.jipipe.api.grouping.parameters
Contains a list of GraphNodeParameterReferenceGroup and GraphNodeParameterCollectionReference Stores references to parameters within an JIPipeGraph
GraphNodeParameterReferenceGroupCollection() - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection
Creates a new instance
GraphNodeParameterReferenceGroupCollection(GraphNodeParameterReferenceGroupCollection) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection
Makes a copy
GraphNodeParameterReferenceGroupCollectionEditorUI - Class in org.hkijena.jipipe.ui.parameterreference
GraphNodeParameterReferenceGroupCollectionEditorUI(JIPipeWorkbench, GraphNodeParameterReferenceGroupCollection, MarkdownDocument, boolean) - Constructor for class org.hkijena.jipipe.ui.parameterreference.GraphNodeParameterReferenceGroupCollectionEditorUI
 
GraphNodeParameterReferenceGroupCollectionParameterEditorUI - Class in org.hkijena.jipipe.api.grouping.parameters
GraphNodeParameterReferenceGroupCollectionParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollectionParameterEditorUI
Creates new instance
GraphNodeSlotValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts
 
GraphNodeSlotValidationReportContext(JIPipeGraphNode, String, JIPipeSlotType) - Constructor for class org.hkijena.jipipe.api.validation.contexts.GraphNodeSlotValidationReportContext
 
GraphNodeSlotValidationReportContext(JIPipeValidationReportContext, JIPipeGraphNode, String, JIPipeSlotType) - Constructor for class org.hkijena.jipipe.api.validation.contexts.GraphNodeSlotValidationReportContext
 
GraphNodeValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts
 
GraphNodeValidationReportContext(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.validation.contexts.GraphNodeValidationReportContext
 
GraphNodeValidationReportContext(JIPipeValidationReportContext, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.validation.contexts.GraphNodeValidationReportContext
 
GraphPostprocessingVariables() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm.GraphPostprocessingVariables
 
GraphUtils - Class in org.hkijena.jipipe.utils
Helper class for graph
GraphValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts
 
GraphValidationReportContext(JIPipeGraph) - Constructor for class org.hkijena.jipipe.api.validation.contexts.GraphValidationReportContext
 
GraphValidationReportContext(JIPipeValidationReportContext, JIPipeGraph) - Constructor for class org.hkijena.jipipe.api.validation.contexts.GraphValidationReportContext
 
GraphWrapperAlgorithmInput - Class in org.hkijena.jipipe.api.grouping
 
GraphWrapperAlgorithmInput(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.grouping.GraphWrapperAlgorithmInput
 
GraphWrapperAlgorithmInput(GraphWrapperAlgorithmInput) - Constructor for class org.hkijena.jipipe.api.grouping.GraphWrapperAlgorithmInput
 
GraphWrapperAlgorithmOutput - Class in org.hkijena.jipipe.api.grouping
 
GraphWrapperAlgorithmOutput(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.grouping.GraphWrapperAlgorithmOutput
 
GraphWrapperAlgorithmOutput(GraphWrapperAlgorithmOutput) - Constructor for class org.hkijena.jipipe.api.grouping.GraphWrapperAlgorithmOutput
 
GRAY - Static variable in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
 
GRAY - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
GrayscaleAttributeFiltering2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
 
GrayscaleAttributeFiltering2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm
 
GrayscaleAttributeFiltering2DAlgorithm(GrayscaleAttributeFiltering2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm
 
GrayscaleAttributeFiltering2DAlgorithm.Attribute - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
 
GrayscaleAttributeFiltering2DAlgorithm.Operation - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
 
GrayscaleAttributeFiltering3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
 
GrayscaleAttributeFiltering3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm
 
GrayscaleAttributeFiltering3DAlgorithm(GrayscaleAttributeFiltering3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm
 
GrayscaleAttributeFiltering3DAlgorithm.Attribute - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
 
GrayscaleAttributeFiltering3DAlgorithm.Operation - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
 
GreyscaleColorSpace - Class in org.hkijena.jipipe.extensions.imagejdatatypes.colorspace
A ColorSpace that indicates that no color space information is set.
GreyscaleColorSpace() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.GreyscaleColorSpace
 
GreyscaleImageData - Interface in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale
Annotates an image as greyscale image
GreyscalePixel5DExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
Variable source that allows to address x, y, and value
GreyscalePixel5DExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.GreyscalePixel5DExpressionParameterVariablesInfo
 
GridCoordinates - Class in org.hkijena.jipipe.extensions.ilastik.utils
Iterate over offset and block (cell) dimensions of a grid in the flat, column-major order.
GridCoordinates(CellGrid) - Constructor for class org.hkijena.jipipe.extensions.ilastik.utils.GridCoordinates
 
GridCoordinates.Block - Class in org.hkijena.jipipe.extensions.ilastik.utils
Container for block offset and block dimensions.
gridHorizontal(Component...) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
gridToRealLocation(Point, double) - Method in enum org.hkijena.jipipe.ui.grapheditor.JIPipeGraphViewMode
 
gridToRealSize(Dimension, double) - Method in enum org.hkijena.jipipe.ui.grapheditor.JIPipeGraphViewMode
 
gridVertical(Component...) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
GroupBoxAnnotationGraphNode - Class in org.hkijena.jipipe.extensions.graphannotation.nodes
 
GroupBoxAnnotationGraphNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.graphannotation.nodes.GroupBoxAnnotationGraphNode
 
GroupBoxAnnotationGraphNode(TextBoxAnnotationGraphNode) - Constructor for class org.hkijena.jipipe.extensions.graphannotation.nodes.GroupBoxAnnotationGraphNode
 
GroupBoxAnnotationGraphNodeTool - Class in org.hkijena.jipipe.extensions.graphannotation.tools
 
GroupBoxAnnotationGraphNodeTool() - Constructor for class org.hkijena.jipipe.extensions.graphannotation.tools.GroupBoxAnnotationGraphNodeTool
 
groupByMenuPath(Collection<Class<? extends JIPipeData>>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData
Groups the data types by their menu path
groupByMenuPaths(Collection<JIPipeNodeTemplate>) - Static method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
groupByMenuPaths(JIPipeNodeTypeCategory, Set<JIPipeNodeInfo>) - Static method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
Gets the registered algorithms, grouped by their menu paths
groupByPosition(boolean, boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
Groups the ROI by their image positions
groupByPosition(boolean, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Groups the ROI by their image positions
groupByReferenceImage() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Groups the ROI by their reference image
GroupHeaderFormData - Class in org.hkijena.jipipe.extensions.forms.datatypes
 
GroupHeaderFormData() - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.GroupHeaderFormData
 
GroupHeaderFormData(GroupHeaderFormData) - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.GroupHeaderFormData
 
GroupHeaderFormGeneratorAlgorithm - Class in org.hkijena.jipipe.extensions.forms.algorithms.generators
 
GroupHeaderFormGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.generators.GroupHeaderFormGeneratorAlgorithm
 
GroupHeaderFormGeneratorAlgorithm(GroupHeaderFormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.generators.GroupHeaderFormGeneratorAlgorithm
 
GroupHeaderPanel(String, Icon, int, Component...) - Constructor for class org.hkijena.jipipe.ui.components.FormPanel.GroupHeaderPanel
 
GroupingPlugin - Class in org.hkijena.jipipe.api.grouping
Extension for anything that is related to JIPipeGraphWrapperAlgorithm
GroupingPlugin() - Constructor for class org.hkijena.jipipe.api.grouping.GroupingPlugin
 
GroupNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
GroupNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.GroupNodeUIContextAction
 
GroupSceneAlgorithm - Class in org.hkijena.jipipe.extensions.scene3d.nodes
 
GroupSceneAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.scene3d.nodes.GroupSceneAlgorithm
 
GroupSceneAlgorithm(GroupSceneAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.scene3d.nodes.GroupSceneAlgorithm
 
groupVerticesByLocation() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
GrowEndVerticesAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.modify
 
GrowEndVerticesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm
 
GrowEndVerticesAlgorithm(GrowEndVerticesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm
 
guessAxes(long[]) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.ImgUtils
Guess axes from image dimensions.

H

handleDefaultAction() - Method in class org.hkijena.jipipe.ui.cache.JIPipeDataTableRowUI
Runs the currently set default action for this data
handleDefaultAction() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeDefaultResultDataSlotRowUI
 
handleDefaultAction() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotRowUI
Action that is triggered when the user double-clicks on the entry in the table
handleDefaultActionOrDisplayDataAnnotation(int) - Method in class org.hkijena.jipipe.ui.cache.JIPipeDataTableRowUI
Runs the currently set default action for this data.
handleDefaultActionOrDisplayDataAnnotation(int) - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeDefaultResultDataSlotRowUI
 
handleDefaultActionOrDisplayDataAnnotation(int) - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotRowUI
Runs the currently set default action for this data.
handlesInput() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.DataSlotModuleInput
 
handlesInput() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.DataSlotModuleOutput
 
handlesInput() - Method in interface org.hkijena.jipipe.extensions.imagej2.io.ImageJ2ModuleIO
 
handlesInput() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.ParameterImageJ2ModuleInput
 
handlesInput() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput
 
handlesInput() - Method in class org.hkijena.jipipe.extensions.imagej2.io.ServiceImageJ2ModuleIO
 
handlesOutput() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.DataSlotModuleInput
 
handlesOutput() - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.DataSlotModuleOutput
 
handlesOutput() - Method in interface org.hkijena.jipipe.extensions.imagej2.io.ImageJ2ModuleIO
 
handlesOutput() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.ParameterImageJ2ModuleInput
 
handlesOutput() - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput
 
handlesOutput() - Method in class org.hkijena.jipipe.extensions.imagej2.io.ServiceImageJ2ModuleIO
 
hasAttachmentOfType(Class<?>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns true if there is an attachment of given type
hasDataType(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Returns true if the specified data type class is registered
hasDatatypeWithId(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Returns true if there is a data type with given ID
hasDefaultConstructor(Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
Returns true if the class has a default constructor
hasEditorFor(Class<?>) - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry
Returns true if there is an editor for the parameter
hashCode() - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
 
hashCode() - Method in class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext
 
hashCode() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
 
hashCode() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
hashCode() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference
 
hashCode() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
hashCode() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
hashCode() - Method in class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceParameter
 
hashCode() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry
 
hashCode() - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
 
hashCode() - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionParameterVariableInfo
 
hashCode() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm.EdgeCandidate
 
hashCode() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm.EdgeCandidate
 
hashCode() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
hashCode() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.Point3d
 
hashCode() - Method in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetDescription
 
hashCode() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceCube
 
hashCode() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
 
hashCode() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndices
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicEnumParameter
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameter
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameter
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameter
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameter
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.library.auth.PasswordParameter
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.library.filesystem.FileChooserBookmark
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.library.images.ImageParameter
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.library.markup.HTMLText
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRange
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameter
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExporterRef
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImporterRef
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRef
 
hashCode() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRef
 
hashCode() - Method in class org.hkijena.jipipe.utils.data.OwningStore
 
hashCode() - Method in class org.hkijena.jipipe.utils.data.WeakStore
 
hasInputSlot(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Returns true if there is an input slot with name
hasInputSlot(String) - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration
Return true if there is an input slot with given name
hasInputSlot(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns true if the algorithm contains an input slot with given name.
hasInputSlot(String) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
If the current node info contains a slot with given name
hasInternetConnection() - Static method in class org.hkijena.jipipe.utils.NetworkUtils
 
hasNodeInfoWithId(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Returns true if the algorithm ID already exists
hasNotifications() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox
 
hasOutputSlot(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Returns true if there is an output slot with name
hasOutputSlot(String) - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration
Return true if there is an output slot with given name
hasOutputSlot(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns true if the algorithm contains an output slot with given name.
hasOutputSlot(String) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
If the current node info contains a slot with given name
hasParameterDataOutputSlot() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
hasSize() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeEmptyThumbnailData
 
hasSize() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData
 
hasSize() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData
 
hasSize() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData
 
hasSize() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData
 
hasSize() - Method in interface org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailData
Returns true if the thumbnail data has a specific size
HasVariableFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.variables
 
HasVariableFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.variables.HasVariableFunction
 
Hdf5 - Class in org.hkijena.jipipe.extensions.ilastik.utils.hdf5
 
HDF5DatasetEntryProvider - Class in org.hkijena.jipipe.extensions.ilastik.utils.hdf5
 
HDF5DatasetEntryProvider(LogService) - Constructor for class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.HDF5DatasetEntryProvider
 
Hdf5Utils - Class in org.hkijena.jipipe.extensions.ilastik.utils
 
Hdf5Utils() - Constructor for class org.hkijena.jipipe.extensions.ilastik.utils.Hdf5Utils
 
height - Variable in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines
 
HELP_URL - Static variable in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmWindow
 
Hessian2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
Wrapper around EDM
Hessian2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.Hessian2DAlgorithm
Instantiates a new node type.
Hessian2DAlgorithm(Hessian2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.Hessian2DAlgorithm
Instantiates a new node type.
HessianSegmentation2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
Segments using a Hessian
HessianSegmentation2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
HessianSegmentation2DAlgorithm(HessianSegmentation2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
Copies the algorithm
hexStringToColor(String) - Static method in class org.hkijena.jipipe.utils.ColorUtils
Converts a hex color string #RRGGBB or #RRGGBBAA to a color
HexToRGBFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.color
 
HexToRGBFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.color.HexToRGBFunction
 
hideErrorUI() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.algorithms.CachedTrackmateAlgorithmViewerWindow
 
hideErrorUI() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerCacheDataViewerWindow
 
hideErrorUI() - Method in class org.hkijena.jipipe.extensions.multiparameters.datatypes.CachedParametersDataViewerWindow
 
hideErrorUI() - Method in class org.hkijena.jipipe.extensions.plots.CachedPlotViewerWindow
 
hideErrorUI() - Method in class org.hkijena.jipipe.extensions.strings.CachedTextViewerWindow
 
hideErrorUI() - Method in class org.hkijena.jipipe.extensions.tables.display.CachedTableViewerWindow
 
hideErrorUI() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
Instruction to remove the error UI By default, it will hide the standard error label
hideSplash() - Method in class org.hkijena.jipipe.ui.components.SplashScreen
 
highlightResults(JIPipeDataBatchGenerationResult) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantInputPreviewPanel
 
highlightResults(JIPipeDataBatchGenerationResult) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantInputPreviewPanelTable
 
HistogramContrastEnhancerAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast
This class is based on ContrastEnhancer This class is not very portable, so I adapted the code here
HistogramContrastEnhancerAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm
 
HistogramContrastEnhancerAlgorithm(HistogramContrastEnhancerAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm
 
HistogramContrastEnhancerAlgorithm.Method - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast
 
HistogramFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramFunction
 
HistogramGenerator - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics
Algorithm that generates ResultsTableData as histogram
HistogramGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.HistogramGenerator
Creates a new instance
HistogramGenerator(HistogramGenerator) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.HistogramGenerator
Creates a copy
HistogramGenerator.MultiChannelMode - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics
Available modes that determine which greyscale value is generated if a multi-channel image is provided
HistogramPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
Contains data to generate a histogram plot Series table colums: Value (Numeric) Multiple series: Yes
HistogramPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
Creates a new instance
HistogramPlotData(HistogramPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
Creates a copy
HistogramPlotData.HistogramType_ - Enum in org.hkijena.jipipe.extensions.plots.datatypes
Available histogram types
HistogramThresholdFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramThresholdFunction(String) - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdFunction
 
HistogramThresholdHuang - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramThresholdHuang() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdHuang
 
HistogramThresholdImageJDefault - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramThresholdImageJDefault() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdImageJDefault
 
HistogramThresholdImageJIsoData - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramThresholdImageJIsoData() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdImageJIsoData
 
HistogramThresholdIntermodes - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramThresholdIntermodes() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdIntermodes
 
HistogramThresholdIsoData - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramThresholdIsoData() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdIsoData
 
HistogramThresholdLi - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramThresholdLi() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdLi
 
HistogramThresholdMaxEntropy - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramThresholdMaxEntropy() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdMaxEntropy
 
HistogramThresholdMean - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramThresholdMean() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdMean
 
HistogramThresholdMinError - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramThresholdMinError() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdMinError
 
HistogramThresholdMinimum - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramThresholdMinimum() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdMinimum
 
HistogramThresholdMoments - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramThresholdMoments() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdMoments
 
HistogramThresholdOtsu - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramThresholdOtsu() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdOtsu
 
HistogramThresholdPercentile - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramThresholdPercentile() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdPercentile
 
HistogramThresholdRenyi - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramThresholdRenyi() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdRenyi
 
HistogramThresholdShanbhag - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramThresholdShanbhag() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdShanbhag
 
HistogramThresholdTriangle - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramThresholdTriangle() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdTriangle
 
HistogramThresholdYen - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
HistogramThresholdYen() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.HistogramThresholdYen
 
HistoryChangedEvent(JIPipeHistoryJournal) - Constructor for class org.hkijena.jipipe.api.history.JIPipeHistoryJournal.HistoryChangedEvent
 
HistoryChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.history.JIPipeHistoryJournal.HistoryChangedEventEmitter
 
HistoryJournalSettings - Class in org.hkijena.jipipe.extensions.settings
All settings for JIPipeGraphEditorUI
HistoryJournalSettings() - Constructor for class org.hkijena.jipipe.extensions.settings.HistoryJournalSettings
 
HistoryJournalUI - Class in org.hkijena.jipipe.ui.history
 
HistoryJournalUI(JIPipeHistoryJournal) - Constructor for class org.hkijena.jipipe.ui.history.HistoryJournalUI
 
HorizontalLineImageJ2ShapeData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.shapes
 
HorizontalLineImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData
 
HorizontalLineImageJ2ShapeData(HorizontalLineImageJ2ShapeData) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData
 
HorizontalLineImageJ2ShapeData(HorizontalLineShape) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData
 
Hough_Circle - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
Hough_Circle() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Hough_Circle
 
houghArray - Variable in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines
 
houghHeight - Variable in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines
 
HoughLine(double, double, int, int, float) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines.HoughLine
Initialises the hough line
HoughLines - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
Adapted from HoughTransform
HoughLines() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines
 
HoughLines.HoughLine - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
Represents a linear line as detected by the hough transform.
HoverHelpEvent(FormPanel, MarkdownDocument) - Constructor for class org.hkijena.jipipe.ui.components.FormPanel.HoverHelpEvent
Creates a new instance
HoverHelpEventEmitter() - Constructor for class org.hkijena.jipipe.ui.components.FormPanel.HoverHelpEventEmitter
 
HSBColorSpace - Class in org.hkijena.jipipe.extensions.imagejdatatypes.colorspace
 
HSBColorSpace() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.HSBColorSpace
 
HSBHueTrackBackground - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
HSBHueTrackBackground() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HSBHueTrackBackground
 
HSBToLABFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.color
 
HSBToLABFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.color.HSBToLABFunction
 
HSBToRGBFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.color
 
HSBToRGBFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.color.HSBToRGBFunction
 
HTMLEditor - Class in org.hkijena.jipipe.ui.components.html
 
HTMLEditor(JIPipeWorkbench, HTMLEditor.Mode, int) - Constructor for class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
HTMLEditor.Mode - Enum in org.hkijena.jipipe.ui.components.html
 
HTMLEditor.StrikeThroughAction - Class in org.hkijena.jipipe.ui.components.html
 
HTMLEditor.SubscriptAction - Class in org.hkijena.jipipe.ui.components.html
 
HTMLEditor.SuperscriptAction - Class in org.hkijena.jipipe.ui.components.html
 
HTMLText - Class in org.hkijena.jipipe.extensions.parameters.library.markup
 
HTMLText() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.markup.HTMLText
 
HTMLText(String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.markup.HTMLText
 
HTMLText(HTMLText) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.markup.HTMLText
 
HTMLText.Deserializer - Class in org.hkijena.jipipe.extensions.parameters.library.markup
 
HTMLText.Serializer - Class in org.hkijena.jipipe.extensions.parameters.library.markup
 
HTMLTextParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.markup
Parameter editor for HTMLText
HTMLTextParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.markup.HTMLTextParameterEditorUI
 
HyperbolicCosineColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a sine function
HyperbolicCosineColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.HyperbolicCosineColumnOperation
 
HyperbolicSineColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a sine function
HyperbolicSineColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.HyperbolicSineColumnOperation
 
HyperbolicTangentColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a sine function
HyperbolicTangentColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.HyperbolicTangentColumnOperation
 
HyperSphereImageJ2ShapeData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.shapes
 
HyperSphereImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HyperSphereImageJ2ShapeData
 
HyperSphereImageJ2ShapeData(HyperSphereImageJ2ShapeData) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HyperSphereImageJ2ShapeData
 
HyperSphereImageJ2ShapeData(HyperSphereShape) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HyperSphereImageJ2ShapeData
 
HyperstackDimension - Enum in org.hkijena.jipipe.extensions.imagejdatatypes.util
 
HyperstackDimensionPairParameter - Class in org.hkijena.jipipe.extensions.imagejalgorithms.parameters
 
HyperstackDimensionPairParameter() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.HyperstackDimensionPairParameter
 
HyperstackDimensionPairParameter(HyperstackDimension, HyperstackDimension) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.HyperstackDimensionPairParameter
 
HyperstackDimensionPairParameter(PairParameter<HyperstackDimension, HyperstackDimension>) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.HyperstackDimensionPairParameter
 
HyperstackDimensionPairParameter.List - Class in org.hkijena.jipipe.extensions.imagejalgorithms.parameters
 
HyperstackSlicerAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions
 
HyperstackSlicerAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm
 
HyperstackSlicerAlgorithm(HyperstackSlicerAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm
 
HysteresisSegmentation3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.segmentation
 
HysteresisSegmentation3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.HysteresisSegmentation3DAlgorithm
 
HysteresisSegmentation3DAlgorithm(HysteresisSegmentation3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.HysteresisSegmentation3DAlgorithm
 

I

ICON_FROM_RESOURCES_CACHE - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
ICON_INVERTED_FROM_RESOURCES_CACHE - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
IconRef - Class in org.hkijena.jipipe.extensions.parameters.library.references
Used by JsonNodeInfo to setup icons
IconRef() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.IconRef
Creates a new instance
IconRef(String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.IconRef
 
IconRef(IconRef) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.IconRef
Copies an instance
IconRef.Deserializer - Class in org.hkijena.jipipe.extensions.parameters.library.references
Deserializes IconRef
IconRef.Serializer - Class in org.hkijena.jipipe.extensions.parameters.library.references
Serializes IconRef
IconRefParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.references
Editor for IconRef
IconRefParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.IconRefParameterEditorUI
 
ID - Static variable in class org.hkijena.jipipe.api.compat.DataTableImageJDataExporter
 
ID - Static variable in class org.hkijena.jipipe.api.compat.DataTableImageJDataImporter
 
ID - Static variable in class org.hkijena.jipipe.extensions.cellpose.CellposeSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.clij2.CLIJSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.filesystem.FilesystemExtensionSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ImageViewerUIROI3DDisplaySettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.ijfilaments.settings.ImageViewerUIFilamentDisplaySettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.ijtrackmate.settings.ImageViewerUISpotsDisplaySettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.ijtrackmate.settings.ImageViewerUITracksDisplaySettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.ilastik.IlastikSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.settings.ImageViewerUIROI2DDisplaySettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer2DUISettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer3DUISettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewerGeneralUISettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.omero.OMEROSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.omnipose.OmniposeSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.processes.ProcessesExtensionSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.python.adapter.PythonAdapterExtensionSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.python.PythonExtensionSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.r.RExtensionSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.settings.BackupSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.settings.DataExporterSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.settings.DefaultCacheDisplaySettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.settings.DefaultResultImporterSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.settings.DownloadSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.settings.ExtensionSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.settings.HistoryJournalSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.settings.NodeTemplateSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.settings.NotificationUISettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.settings.ProjectsSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.settings.RuntimeSettings
 
ID - Static variable in class org.hkijena.jipipe.extensions.settings.TableViewerUISettings
 
IfElseExprFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.control
 
IfElseExprFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.control.IfElseExprFunction
 
IfElseFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.control
 
IfElseFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.control.IfElseFunction
 
ifNullOr(T, boolean, Predicate<T>) - Static method in class org.hkijena.jipipe.utils.StreamUtils
Returns ifNull if the nullable is null.
IGNORE_CUSTOM - Static variable in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Whether to ignore all custom parameters
IGNORE_REFLECTION - Static variable in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Whether to ignore all reflection parameters
IgnoreColorSpace - Class in org.hkijena.jipipe.extensions.imagejdatatypes.colorspace
A ColorSpace that indicates that no color space information is set.
IgnoreColorSpace() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.IgnoreColorSpace
 
IJ2DataFromImageWindowImageJImporter - Class in org.hkijena.jipipe.extensions.imagej2.compat
 
IJ2DataFromImageWindowImageJImporter() - Constructor for class org.hkijena.jipipe.extensions.imagej2.compat.IJ2DataFromImageWindowImageJImporter
 
IJ2DataToImageWindowImageJExporter - Class in org.hkijena.jipipe.extensions.imagej2.compat
 
IJ2DataToImageWindowImageJExporter() - Constructor for class org.hkijena.jipipe.extensions.imagej2.compat.IJ2DataToImageWindowImageJExporter
 
IJ3DPlugin - Class in org.hkijena.jipipe.extensions.ij3d
 
IJ3DPlugin() - Constructor for class org.hkijena.jipipe.extensions.ij3d.IJ3DPlugin
 
IJ3DUtils - Class in org.hkijena.jipipe.extensions.ij3d
 
IJ3DUtils() - Constructor for class org.hkijena.jipipe.extensions.ij3d.IJ3DUtils
 
IJLogToJIPipeProgressInfoPump - Class in org.hkijena.jipipe.utils
Takes control of the log in IJ and pumps its messages into a JIPipeProgressInfo
IJLogToJIPipeProgressInfoPump(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.utils.IJLogToJIPipeProgressInfoPump
 
IJProgressAdapter - Class in org.hkijena.jipipe.ui.ijupdater
Adapter between JIPipe and ImageJ progress implementations
IJProgressAdapter() - Constructor for class org.hkijena.jipipe.ui.ijupdater.IJProgressAdapter
 
IlastikAutoContextAlgorithm - Class in org.hkijena.jipipe.extensions.ilastik.nodes
 
IlastikAutoContextAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
IlastikAutoContextAlgorithm(IlastikAutoContextAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
IlastikAutoContextAlgorithm.OutputParameters - Class in org.hkijena.jipipe.extensions.ilastik.nodes
 
IlastikEasyInstaller - Class in org.hkijena.jipipe.extensions.ilastik.installers
 
IlastikEasyInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.ilastik.installers.IlastikEasyInstaller
 
IlastikModelData - Class in org.hkijena.jipipe.extensions.ilastik.datatypes
 
IlastikModelData(Path) - Constructor for class org.hkijena.jipipe.extensions.ilastik.datatypes.IlastikModelData
 
IlastikModelData(byte[], String) - Constructor for class org.hkijena.jipipe.extensions.ilastik.datatypes.IlastikModelData
 
IlastikModelData(IlastikModelData) - Constructor for class org.hkijena.jipipe.extensions.ilastik.datatypes.IlastikModelData
 
IlastikObjectClassificationAlgorithm - Class in org.hkijena.jipipe.extensions.ilastik.nodes
 
IlastikObjectClassificationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
IlastikObjectClassificationAlgorithm(IlastikObjectClassificationAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
IlastikObjectClassificationAlgorithm.OutputParameters - Class in org.hkijena.jipipe.extensions.ilastik.nodes
 
IlastikPixelClassificationAlgorithm - Class in org.hkijena.jipipe.extensions.ilastik.nodes
 
IlastikPixelClassificationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm
 
IlastikPixelClassificationAlgorithm(IlastikPixelClassificationAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm
 
IlastikPixelClassificationAlgorithm.OutputParameters - Class in org.hkijena.jipipe.extensions.ilastik.nodes
 
IlastikPlugin - Class in org.hkijena.jipipe.extensions.ilastik
 
IlastikPlugin() - Constructor for class org.hkijena.jipipe.extensions.ilastik.IlastikPlugin
 
IlastikPredictionMapsObjectClassificationAlgorithm - Class in org.hkijena.jipipe.extensions.ilastik.nodes
 
IlastikPredictionMapsObjectClassificationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
IlastikPredictionMapsObjectClassificationAlgorithm(IlastikPredictionMapsObjectClassificationAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters - Class in org.hkijena.jipipe.extensions.ilastik.nodes
 
IlastikProjectValidationMode - Enum in org.hkijena.jipipe.extensions.ilastik.parameters
 
IlastikSegmentationImageObjectClassificationAlgorithm - Class in org.hkijena.jipipe.extensions.ilastik.nodes
 
IlastikSegmentationImageObjectClassificationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
IlastikSegmentationImageObjectClassificationAlgorithm(IlastikSegmentationImageObjectClassificationAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters - Class in org.hkijena.jipipe.extensions.ilastik.nodes
 
IlastikSettings - Class in org.hkijena.jipipe.extensions.ilastik
 
IlastikSettings() - Constructor for class org.hkijena.jipipe.extensions.ilastik.IlastikSettings
 
IlastikUtils - Class in org.hkijena.jipipe.extensions.ilastik.utils
 
IlastikUtils() - Constructor for class org.hkijena.jipipe.extensions.ilastik.utils.IlastikUtils
 
IlluminationCorrection2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast
Applies illumination correction
IlluminationCorrection2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.IlluminationCorrection2DAlgorithm
 
IlluminationCorrection2DAlgorithm(IlluminationCorrection2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.IlluminationCorrection2DAlgorithm
Copies the algorithm
Image2DData - Interface in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2
Annotates an image as 2D image
Image3DData - Interface in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3
Annotates an image as 3D image
Image3DRendererSettings - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d
 
Image3DRendererSettings() - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.Image3DRendererSettings
 
Image3DRendererSettings(Image3DRendererSettings) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.Image3DRendererSettings
 
Image3DRenderType - Enum in org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d
 
Image4DData - Interface in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4
Annotates an image as 2D image
Image5DData - Interface in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5
Annotates an image as 2D image
Image5DExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
Variable source that contains basic information about an image
Image5DExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.Image5DExpressionParameterVariablesInfo
 
Image5DSliceIndexExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
Image5DSliceIndexExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Image5DSliceIndexExpressionParameterVariablesInfo
 
Image_16_32_Filter - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary
 
Image_16_32_Filter() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.Image_16_32_Filter
 
Image_8_16_32_Filter - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary
 
Image_8_16_32_Filter() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.Image_8_16_32_Filter
 
ImageBlendLayer - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
 
ImageBlendLayer() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageBlendLayer
 
ImageBlendLayer(ImageBlendLayer) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageBlendLayer
 
ImageBlendMode - Enum in org.hkijena.jipipe.extensions.imagejdatatypes.util
 
ImageBoxAnnotationGraphNode - Class in org.hkijena.jipipe.extensions.graphannotation.nodes
 
ImageBoxAnnotationGraphNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode
 
ImageBoxAnnotationGraphNode(ImageBoxAnnotationGraphNode) - Constructor for class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode
 
ImageBoxAnnotationGraphNode.ImageParameters - Class in org.hkijena.jipipe.extensions.graphannotation.nodes
 
ImageBoxAnnotationGraphNodeTool - Class in org.hkijena.jipipe.extensions.graphannotation.tools
 
ImageBoxAnnotationGraphNodeTool() - Constructor for class org.hkijena.jipipe.extensions.graphannotation.tools.ImageBoxAnnotationGraphNodeTool
 
ImageCalculator2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
Wrapper around ImageProcessor
ImageCalculator2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DAlgorithm
Instantiates a new node type.
ImageCalculator2DAlgorithm(ImageCalculator2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DAlgorithm
Instantiates a new node type.
ImageCalculator2DAlgorithm.Operand - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
Determines the order of input images
ImageCalculator2DAlgorithm.Operation - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
Available math operations
ImageCalculator2DExpression - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
 
ImageCalculator2DExpression(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DExpression
 
ImageCalculator2DExpression(ImageCalculator2DExpression) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DExpression
 
ImageCalculator2DMergingAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
Wrapper around ImageProcessor
ImageCalculator2DMergingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DMergingAlgorithm
Instantiates a new node type.
ImageCalculator2DMergingAlgorithm(ImageCalculator2DMergingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DMergingAlgorithm
Instantiates a new node type.
ImageComparer2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
Wrapper around ImageProcessor
ImageComparer2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm
Instantiates a new node type.
ImageComparer2DAlgorithm(ImageComparer2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm
Instantiates a new node type.
ImageComparer2DAlgorithm.Operand - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
Determines the order of input images
ImageComparer2DAlgorithm.Operation - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
Available math operations
ImageDataPreview - Class in org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis
 
ImageDataPreview(JIPipeProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableMetadataRow, JIPipeExportedDataAnnotation) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImageDataPreview
Creates a new renderer
ImageDimensions - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
Encapsulates the dimensions of an image.
ImageDimensions(int, int, int, int, int) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageDimensions
 
ImageDimensions(int, int) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageDimensions
 
ImageFrame - Class in org.hkijena.jipipe.ui.components
 
ImageFrame(BufferedImage, boolean, SizeFitMode, boolean) - Constructor for class org.hkijena.jipipe.ui.components.ImageFrame
 
ImageFromMatrix2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate
Wrapper around Convolver
ImageFromMatrix2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.ImageFromMatrix2DAlgorithm
Instantiates a new node type.
ImageFromMatrix2DAlgorithm(ImageFromMatrix2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.ImageFromMatrix2DAlgorithm
Creates a copy
ImageImportParameters - Class in org.hkijena.jipipe.extensions.omero.parameters
 
ImageImportParameters() - Constructor for class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
ImageImportParameters(ImageImportParameters) - Constructor for class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
ImageJ1ToImageJ2Converter - Class in org.hkijena.jipipe.extensions.imagej2.converters
 
ImageJ1ToImageJ2Converter() - Constructor for class org.hkijena.jipipe.extensions.imagej2.converters.ImageJ1ToImageJ2Converter
 
ImageJ2DatasetData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes
 
ImageJ2DatasetData(Dataset) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.ImageJ2DatasetData
 
ImageJ2DatasetData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.ImageJ2DatasetData
 
ImageJ2JIPipeModuleIOService - Interface in org.hkijena.jipipe.extensions.imagej2.io
Service to communicate between ImageJ and JIPipe
ImageJ2ModuleIO - Interface in org.hkijena.jipipe.extensions.imagej2.io
An object that is responsible for transferring inputs and outputs between JIPipe slots/parameters and ImageJ2 parameters
ImageJ2OpNode - Class in org.hkijena.jipipe.extensions.imagej2
 
ImageJ2OpNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNode
 
ImageJ2OpNode(ImageJ2OpNode) - Constructor for class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNode
 
ImageJ2OpNodeInfo - Class in org.hkijena.jipipe.extensions.imagej2
A JIPipeNodeInfo implementation that reads its information from an ImageJ2 Command
ImageJ2OpNodeInfo(Context, OpInfo, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
ImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds
 
ImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.ImageJ2OutOfBoundsFactoryData
 
ImageJ2Plugin - Class in org.hkijena.jipipe.extensions.imagej2
Extension that adds ImageJ2 algorithms
ImageJ2Plugin() - Constructor for class org.hkijena.jipipe.extensions.imagej2.ImageJ2Plugin
 
ImageJ2ShapeData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.shapes
 
ImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.ImageJ2ShapeData
 
ImageJ2ToImageJ1Converter - Class in org.hkijena.jipipe.extensions.imagej2.converters
 
ImageJ2ToImageJ1Converter() - Constructor for class org.hkijena.jipipe.extensions.imagej2.converters.ImageJ2ToImageJ1Converter
 
ImageJAlgorithmsPlugin - Class in org.hkijena.jipipe.extensions.imagejalgorithms
Extension that adds ImageJ2 algorithms
ImageJAlgorithmsPlugin() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ImageJAlgorithmsPlugin
 
ImageJAlgorithmUtils - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
ImageJAlgorithmUtils() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.ImageJAlgorithmUtils
 
ImageJCalibrationMode - Enum in org.hkijena.jipipe.utils
 
ImageJDataExporter - Interface in org.hkijena.jipipe.api.compat
 
ImageJDataExporterListCellRenderer - Class in org.hkijena.jipipe.ui.components.renderers
ImageJDataExporterListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.components.renderers.ImageJDataExporterListCellRenderer
Creates a new renderer
ImageJDataExporterPicker - Class in org.hkijena.jipipe.ui.components.pickers
 
ImageJDataExporterPicker(Window) - Constructor for class org.hkijena.jipipe.ui.components.pickers.ImageJDataExporterPicker
 
ImageJDataExporterRef - Class in org.hkijena.jipipe.extensions.parameters.library.references
Helper to allow easy serialization of ImageJDataExporter references
ImageJDataExporterRef(String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExporterRef
 
ImageJDataExporterRef() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExporterRef
New instance
ImageJDataExporterRef(ImageJDataExporter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExporterRef
 
ImageJDataExporterRef(ImageJDataExporterRef) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExporterRef
 
ImageJDataExporterRef.Deserializer - Class in org.hkijena.jipipe.extensions.parameters.library.references
Deserializes the reference from a string
ImageJDataExporterRef.Serializer - Class in org.hkijena.jipipe.extensions.parameters.library.references
Serializes the reference as ID
ImageJDataExporterRefParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.references
Parameter for JIPipeNodeInfoRef
ImageJDataExporterRefParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExporterRefParameterEditorUI
 
ImageJDataExporterUI - Class in org.hkijena.jipipe.api.compat
User interface around a ImageJDataExportOperation
ImageJDataExporterUI(JIPipeWorkbench, ImageJDataExportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ImageJDataExporterUI
 
ImageJDataExportOperation - Class in org.hkijena.jipipe.api.compat
Combines a ImageJDataExporter with its appropriate parameters.
ImageJDataExportOperation() - Constructor for class org.hkijena.jipipe.api.compat.ImageJDataExportOperation
 
ImageJDataExportOperation(ImageJDataExporter) - Constructor for class org.hkijena.jipipe.api.compat.ImageJDataExportOperation
 
ImageJDataExportOperationRef - Class in org.hkijena.jipipe.extensions.parameters.library.references
Helper to allow easy serialization of ImageJDataExporter references
ImageJDataExportOperationRef(String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
ImageJDataExportOperationRef() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
New instance
ImageJDataExportOperationRef(ImageJDataExporter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
ImageJDataExportOperationRef(ImageJDataExportOperationRef) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
ImageJDataExportOperationRefParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.references
Parameter for JIPipeNodeInfoRef
ImageJDataExportOperationRefParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRefParameterEditorUI
 
ImageJDataImporter - Interface in org.hkijena.jipipe.api.compat
 
ImageJDataImporterListCellRenderer - Class in org.hkijena.jipipe.ui.components.renderers
ImageJDataImporterListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.components.renderers.ImageJDataImporterListCellRenderer
Creates a new renderer
ImageJDataImporterPicker - Class in org.hkijena.jipipe.ui.components.pickers
 
ImageJDataImporterPicker(Window) - Constructor for class org.hkijena.jipipe.ui.components.pickers.ImageJDataImporterPicker
 
ImageJDataImporterRef - Class in org.hkijena.jipipe.extensions.parameters.library.references
Helper to allow easy serialization of ImageJDataImporter references
ImageJDataImporterRef(String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImporterRef
 
ImageJDataImporterRef() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImporterRef
New instance
ImageJDataImporterRef(ImageJDataImporterRef) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImporterRef
 
ImageJDataImporterRef(ImageJDataImporter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImporterRef
 
ImageJDataImporterRef.Deserializer - Class in org.hkijena.jipipe.extensions.parameters.library.references
Deserializes the reference from a string
ImageJDataImporterRef.Serializer - Class in org.hkijena.jipipe.extensions.parameters.library.references
Serializes the reference as ID
ImageJDataImporterRefParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.references
Parameter for JIPipeNodeInfoRef
ImageJDataImporterRefParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImporterRefParameterEditorUI
 
ImageJDataImporterUI - Class in org.hkijena.jipipe.api.compat
User interface around a ImageJDataImportOperation
ImageJDataImporterUI(JIPipeWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ImageJDataImporterUI
 
ImageJDataImportOperation - Class in org.hkijena.jipipe.api.compat
Runs a ImageJDataImporter import operation.
ImageJDataImportOperation() - Constructor for class org.hkijena.jipipe.api.compat.ImageJDataImportOperation
 
ImageJDataImportOperation(ImageJDataImporter) - Constructor for class org.hkijena.jipipe.api.compat.ImageJDataImportOperation
 
ImageJDataImportOperationRef - Class in org.hkijena.jipipe.extensions.parameters.library.references
Helper to allow easy serialization of ImageJDataImporter references
ImageJDataImportOperationRef(String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRef
 
ImageJDataImportOperationRef() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRef
New instance
ImageJDataImportOperationRef(ImageJDataImportOperationRef) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRef
 
ImageJDataImportOperationRef(ImageJDataImporter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRef
 
ImageJDataImportOperationRefParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.references
Parameter for JIPipeNodeInfoRef
ImageJDataImportOperationRefParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRefParameterEditorUI
 
ImageJDataSetDataImageViewerCustomLoader - Class in org.hkijena.jipipe.extensions.imagej2.util
 
ImageJDataSetDataImageViewerCustomLoader() - Constructor for class org.hkijena.jipipe.extensions.imagej2.util.ImageJDataSetDataImageViewerCustomLoader
 
ImageJDataTypesPlugin - Class in org.hkijena.jipipe.extensions.imagejdatatypes
Provides ImageJ data types
ImageJDataTypesPlugin() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesPlugin
 
ImageJDataTypesSettings - Class in org.hkijena.jipipe.extensions.imagejdatatypes
 
ImageJDataTypesSettings() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesSettings
 
ImageJExporterParameterSettings - Annotation Type in org.hkijena.jipipe.extensions.parameters.library.references
 
ImageJExportParameters - Class in org.hkijena.jipipe.api.compat
Describes how data should be exported into ImageJ
ImageJExportParameters() - Constructor for class org.hkijena.jipipe.api.compat.ImageJExportParameters
 
ImageJExportParameters(boolean, boolean, boolean, String) - Constructor for class org.hkijena.jipipe.api.compat.ImageJExportParameters
 
ImageJExportParameters(ImageJExportParameters) - Constructor for class org.hkijena.jipipe.api.compat.ImageJExportParameters
 
ImageJImageToImpImageDataTypeConverter - Class in org.hkijena.jipipe.extensions.imp.datatypes
 
ImageJImageToImpImageDataTypeConverter() - Constructor for class org.hkijena.jipipe.extensions.imp.datatypes.ImageJImageToImpImageDataTypeConverter
 
ImageJImporterParameterSettings - Annotation Type in org.hkijena.jipipe.extensions.parameters.library.references
 
ImageJImportParameters - Class in org.hkijena.jipipe.api.compat
Describes how data should be imported into ImageJ
ImageJImportParameters() - Constructor for class org.hkijena.jipipe.api.compat.ImageJImportParameters
 
ImageJImportParameters(String) - Constructor for class org.hkijena.jipipe.api.compat.ImageJImportParameters
 
ImageJImportParameters(ImageJImportParameters) - Constructor for class org.hkijena.jipipe.api.compat.ImageJImportParameters
 
ImageJMacro - Class in org.hkijena.jipipe.extensions.parameters.library.scripts
Encapsulates ImageJ macro code to be detected by the parameter system
ImageJMacro() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.scripts.ImageJMacro
 
ImageJMacro(ImageJMacro) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.scripts.ImageJMacro
 
ImageJNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories
 
ImageJNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory
 
ImageJUtils - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
Utility functions for ImageJ
ImageJUtils() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
ImageLoaderRun(ImageViewerPanel3D, ImagePlusData, Image3DRenderType, int) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D.ImageLoaderRun
 
ImageParameter - Class in org.hkijena.jipipe.extensions.parameters.library.images
 
ImageParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.images.ImageParameter
 
ImageParameter(BufferedImage) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.images.ImageParameter
 
ImageParameter(ImageParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.images.ImageParameter
 
ImageParameter(URL) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.images.ImageParameter
 
ImageParameter.Deserializer - Class in org.hkijena.jipipe.extensions.parameters.library.images
 
ImageParameter.Serializer - Class in org.hkijena.jipipe.extensions.parameters.library.images
 
ImageParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.images
 
ImageParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.images.ImageParameterEditorUI
Creates new instance
ImageParameters() - Constructor for class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
ImageParameters(ImageBoxAnnotationGraphNode.ImageParameters) - Constructor for class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
ImageParameters() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.ImageParameters
 
ImageParameters(MontageCreator.ImageParameters) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.ImageParameters
 
ImageParameterSettings - Annotation Type in org.hkijena.jipipe.extensions.parameters.library.images
 
ImagePlus2DColorData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color
A colored image without dimension.
ImagePlus2DColorData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorData
 
ImagePlus2DColorData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorData
 
ImagePlus2DColorHSBData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color
RGB colored 2D image
ImagePlus2DColorHSBData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorHSBData
 
ImagePlus2DColorHSBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorHSBData
 
ImagePlus2DColorHSBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorHSBData
Creates an empty image with given dimensions
ImagePlus2DColorLABData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color
RGB colored 2D image
ImagePlus2DColorLABData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorLABData
 
ImagePlus2DColorLABData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorLABData
 
ImagePlus2DColorLABData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorLABData
Creates an empty image with given dimensions
ImagePlus2DColorRGBData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color
RGB colored 2D image
ImagePlus2DColorRGBData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorRGBData
 
ImagePlus2DColorRGBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorRGBData
 
ImagePlus2DColorRGBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorRGBData
Creates an empty image with given dimensions
ImagePlus2DData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2
2D image
ImagePlus2DData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.ImagePlus2DData
 
ImagePlus2DData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.ImagePlus2DData
 
ImagePlus2DGreyscale16UData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale
16-bit greyscale 2D image
ImagePlus2DGreyscale16UData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale16UData
 
ImagePlus2DGreyscale16UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale16UData
Creates an empty image with given dimensions
ImagePlus2DGreyscale16UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale16UData
 
ImagePlus2DGreyscale32FData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale
32 bit float greyscale 2D image
ImagePlus2DGreyscale32FData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale32FData
 
ImagePlus2DGreyscale32FData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale32FData
Creates an empty image with given dimensions
ImagePlus2DGreyscale32FData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale32FData
 
ImagePlus2DGreyscale8UData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale
8-bit greyscale 2D image
ImagePlus2DGreyscale8UData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale8UData
 
ImagePlus2DGreyscale8UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale8UData
Creates an empty image with given dimensions
ImagePlus2DGreyscale8UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale8UData
 
ImagePlus2DGreyscaleData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale
Greyscale 2D image
ImagePlus2DGreyscaleData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleData
 
ImagePlus2DGreyscaleData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleData
 
ImagePlus2DGreyscaleMaskData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale
8-bit mask 2D image
ImagePlus2DGreyscaleMaskData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleMaskData
 
ImagePlus2DGreyscaleMaskData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleMaskData
Creates an empty image with given dimensions
ImagePlus2DGreyscaleMaskData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleMaskData
 
ImagePlus3DColorData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color
A colored image without dimension.
ImagePlus3DColorData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorData
 
ImagePlus3DColorData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorData
 
ImagePlus3DColorHSBData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color
RGB color 3D image
ImagePlus3DColorHSBData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorHSBData
 
ImagePlus3DColorHSBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorHSBData
Creates an empty image with given dimensions
ImagePlus3DColorHSBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorHSBData
 
ImagePlus3DColorLABData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color
RGB color 3D image
ImagePlus3DColorLABData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorLABData
 
ImagePlus3DColorLABData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorLABData
 
ImagePlus3DColorLABData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorLABData
Creates an empty image with given dimensions
ImagePlus3DColorRGBData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color
RGB color 3D image
ImagePlus3DColorRGBData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorRGBData
 
ImagePlus3DColorRGBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorRGBData
 
ImagePlus3DColorRGBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorRGBData
Creates an empty image with given dimensions
ImagePlus3DData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3
3D image
ImagePlus3DData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.ImagePlus3DData
 
ImagePlus3DData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.ImagePlus3DData
 
ImagePlus3DGreyscale16UData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale
16-bit greyscale 3D image
ImagePlus3DGreyscale16UData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale16UData
 
ImagePlus3DGreyscale16UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale16UData
Creates an empty image with given dimensions
ImagePlus3DGreyscale16UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale16UData
 
ImagePlus3DGreyscale32FData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale
32-bit floating point greyscale 3D image
ImagePlus3DGreyscale32FData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale32FData
 
ImagePlus3DGreyscale32FData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale32FData
Creates an empty image with given dimensions
ImagePlus3DGreyscale32FData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale32FData
 
ImagePlus3DGreyscale8UData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale
8-bit greyscale 3D image
ImagePlus3DGreyscale8UData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale8UData
 
ImagePlus3DGreyscale8UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale8UData
Creates an empty image with given dimensions
ImagePlus3DGreyscale8UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale8UData
 
ImagePlus3DGreyscaleData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale
Greyscale 3D image
ImagePlus3DGreyscaleData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleData
 
ImagePlus3DGreyscaleData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleData
 
ImagePlus3DGreyscaleMaskData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale
8-bit mask 3D image
ImagePlus3DGreyscaleMaskData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleMaskData
 
ImagePlus3DGreyscaleMaskData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleMaskData
Creates an empty image with given dimensions
ImagePlus3DGreyscaleMaskData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleMaskData
 
ImagePlus4DColorData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color
A colored image without dimension.
ImagePlus4DColorData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorData
 
ImagePlus4DColorData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorData
 
ImagePlus4DColorHSBData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color
RGB color 4D image
ImagePlus4DColorHSBData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorHSBData
 
ImagePlus4DColorHSBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorHSBData
 
ImagePlus4DColorHSBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorHSBData
Creates an empty image with given dimensions
ImagePlus4DColorLABData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color
RGB color 4D image
ImagePlus4DColorLABData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorLABData
 
ImagePlus4DColorLABData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorLABData
 
ImagePlus4DColorLABData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorLABData
Creates an empty image with given dimensions
ImagePlus4DColorRGBData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color
RGB color 4D image
ImagePlus4DColorRGBData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorRGBData
 
ImagePlus4DColorRGBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorRGBData
 
ImagePlus4DColorRGBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorRGBData
Creates an empty image with given dimensions
ImagePlus4DData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4
4D image
ImagePlus4DData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.ImagePlus4DData
 
ImagePlus4DData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.ImagePlus4DData
 
ImagePlus4DGreyscale16UData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale
16-bit greyscale 4D image
ImagePlus4DGreyscale16UData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale16UData
 
ImagePlus4DGreyscale16UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale16UData
Creates an empty image with given dimensions
ImagePlus4DGreyscale16UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale16UData
 
ImagePlus4DGreyscale32FData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale
32-bit floating point greyscale 4D image
ImagePlus4DGreyscale32FData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale32FData
 
ImagePlus4DGreyscale32FData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale32FData
Creates an empty image with given dimensions
ImagePlus4DGreyscale32FData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale32FData
 
ImagePlus4DGreyscale8UData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale
8-bit greyscale 4D image
ImagePlus4DGreyscale8UData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale8UData
 
ImagePlus4DGreyscale8UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale8UData
Creates an empty image with given dimensions
ImagePlus4DGreyscale8UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale8UData
 
ImagePlus4DGreyscaleData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale
Greyscale 4D image
ImagePlus4DGreyscaleData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleData
 
ImagePlus4DGreyscaleData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleData
 
ImagePlus4DGreyscaleMaskData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale
Mask 4D image
ImagePlus4DGreyscaleMaskData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleMaskData
 
ImagePlus4DGreyscaleMaskData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleMaskData
Creates an empty image with given dimensions
ImagePlus4DGreyscaleMaskData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleMaskData
 
ImagePlus5DColorData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color
A colored image without dimension.
ImagePlus5DColorData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorData
 
ImagePlus5DColorData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorData
 
ImagePlus5DColorHSBData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color
RGB color 5D image
ImagePlus5DColorHSBData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorHSBData
 
ImagePlus5DColorHSBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorHSBData
 
ImagePlus5DColorHSBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorHSBData
Creates an empty image with given dimensions
ImagePlus5DColorLABData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color
RGB color 5D image
ImagePlus5DColorLABData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorLABData
 
ImagePlus5DColorLABData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorLABData
 
ImagePlus5DColorLABData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorLABData
Creates an empty image with given dimensions
ImagePlus5DColorRGBData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color
RGB color 5D image
ImagePlus5DColorRGBData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorRGBData
 
ImagePlus5DColorRGBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorRGBData
 
ImagePlus5DColorRGBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorRGBData
Creates an empty image with given dimensions
ImagePlus5DData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5
5D image
ImagePlus5DData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.ImagePlus5DData
 
ImagePlus5DData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.ImagePlus5DData
 
ImagePlus5DGreyscale16UData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale
16-bit greyscale 5D image
ImagePlus5DGreyscale16UData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale16UData
 
ImagePlus5DGreyscale16UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale16UData
Creates an empty image with given dimensions
ImagePlus5DGreyscale16UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale16UData
 
ImagePlus5DGreyscale32FData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale
32-bit floating point greyscale image
ImagePlus5DGreyscale32FData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale32FData
 
ImagePlus5DGreyscale32FData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale32FData
Creates an empty image with given dimensions
ImagePlus5DGreyscale32FData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale32FData
 
ImagePlus5DGreyscale8UData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale
8-bit greyscale 5D image
ImagePlus5DGreyscale8UData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale8UData
 
ImagePlus5DGreyscale8UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale8UData
Creates an empty image with given dimensions
ImagePlus5DGreyscale8UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale8UData
 
ImagePlus5DGreyscaleData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale
Greyscale 5D image
ImagePlus5DGreyscaleData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleData
 
ImagePlus5DGreyscaleData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleData
 
ImagePlus5DGreyscaleMaskData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale
Mask 5D image
ImagePlus5DGreyscaleMaskData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleMaskData
 
ImagePlus5DGreyscaleMaskData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleMaskData
Creates an empty image with given dimensions
ImagePlus5DGreyscaleMaskData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleMaskData
 
ImagePlusColorData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color
A colored image without dimension.
ImagePlusColorData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorData
 
ImagePlusColorData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorData
 
ImagePlusColorHSBData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color
HSV colored image without dimension.
ImagePlusColorHSBData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorHSBData
 
ImagePlusColorHSBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorHSBData
 
ImagePlusColorHSBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorHSBData
Creates an empty image with given dimensions
ImagePlusColorLABData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color
LAB colored image without dimension.
ImagePlusColorLABData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorLABData
 
ImagePlusColorLABData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorLABData
 
ImagePlusColorLABData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorLABData
Creates an empty image with given dimensions
ImagePlusColorRGBData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color
RGB colored image without dimension.
ImagePlusColorRGBData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorRGBData
 
ImagePlusColorRGBData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorRGBData
 
ImagePlusColorRGBData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorRGBData
Creates an empty image with given dimensions
ImagePlusData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes
ImageJ image
ImagePlusData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
ImagePlusData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
ImagePlusDataFromImageWindowImageJImporter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.compat
 
ImagePlusDataFromImageWindowImageJImporter(Class<? extends ImagePlusData>) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ImagePlusDataFromImageWindowImageJImporter
 
ImagePlusDataToCLIJImageDataConverter - Class in org.hkijena.jipipe.extensions.clij2.datatypes
Converter from ImagePlusData to CLIJImageData
ImagePlusDataToCLIJImageDataConverter() - Constructor for class org.hkijena.jipipe.extensions.clij2.datatypes.ImagePlusDataToCLIJImageDataConverter
 
ImagePlusDataToImageWindowImageJExporter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.compat
 
ImagePlusDataToImageWindowImageJExporter() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ImagePlusDataToImageWindowImageJExporter
 
ImagePlusFFT2DData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft
2D image in frequency space
ImagePlusFFT2DData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFT2DData
Creates a new instance
ImagePlusFFT3DData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft
3D image in frequency space
ImagePlusFFT3DData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFT3DData
Creates a new instance
ImagePlusFFT4DData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft
4D image in frequency space
ImagePlusFFT4DData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFT4DData
Creates a new instance
ImagePlusFFT5DData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft
5D image in frequency space
ImagePlusFFT5DData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFT5DData
Creates a new instance
ImagePlusFFTData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft
Image in frequency space
ImagePlusFFTData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFTData
Creates a new instance
ImagePlusFFTData.FFTInfo - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft
Class that stores info about the FHT object
ImagePlusFromFile - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources
Loads an image data from a file via IJ.openFile()
ImagePlusFromFile(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ImagePlusFromFile
 
ImagePlusFromFile(ImagePlusFromFile) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ImagePlusFromFile
Copies the algorithm
ImagePlusFromGUI - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
Imports ImagePlusData from the GUI
ImagePlusFromGUI(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ImagePlusFromGUI
 
ImagePlusFromGUI(ImagePlusFromGUI) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ImagePlusFromGUI
 
ImagePlusGreyscale16UData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale
16-bit greyscale image without dimension.
ImagePlusGreyscale16UData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale16UData
 
ImagePlusGreyscale16UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale16UData
Creates an empty image with given dimensions
ImagePlusGreyscale16UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale16UData
 
ImagePlusGreyscale32FData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale
32 bit float greyscale image without dimension.
ImagePlusGreyscale32FData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale32FData
 
ImagePlusGreyscale32FData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale32FData
Creates an empty image with given dimensions
ImagePlusGreyscale32FData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale32FData
 
ImagePlusGreyscale8UData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale
8-bit greyscale image without dimension.
ImagePlusGreyscale8UData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale8UData
 
ImagePlusGreyscale8UData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale8UData
Creates an empty image with given dimensions
ImagePlusGreyscale8UData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale8UData
 
ImagePlusGreyscaleData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale
Greyscale image without dimension.
ImagePlusGreyscaleData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleData
 
ImagePlusGreyscaleData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleData
 
ImagePlusGreyscaleMaskData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale
8-bit mask without dimension.
ImagePlusGreyscaleMaskData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleMaskData
 
ImagePlusGreyscaleMaskData(ImageDimensions) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleMaskData
Creates an empty image with given dimensions
ImagePlusGreyscaleMaskData(ImagePlus, ColorSpace) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleMaskData
 
ImagePlusImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.data.input
Handling of ImagePlus It is assumed that these refer to images (conversion to ImageJ2DatasetData)
ImagePlusImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.data.input.ImagePlusImageJ2ModuleInput
 
ImagePlusImageJ2ModuleOutput - Class in org.hkijena.jipipe.extensions.imagej2.io.data.output
Handling of ImagePlus It is assumed that these refer to images (conversion to ImageJ2DatasetData)
ImagePlusImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.data.output.ImagePlusImageJ2ModuleOutput
 
ImagePlusPropertiesExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
Variable source that contains image statistics
ImagePlusPropertiesExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImagePlusPropertiesExpressionParameterVariablesInfo
 
ImagePlusResultImportRun - Class in org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis
 
ImagePlusResultImportRun(JIPipeDataSlot, JIPipeDataTableMetadataRow, Path, String, String, String, JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImagePlusResultImportRun
 
ImagePlusToGUI - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
Imports ImagePlusData from the GUI
ImagePlusToGUI(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ImagePlusToGUI
 
ImagePlusToGUI(ImagePlusToGUI) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ImagePlusToGUI
 
ImagePlusToOMEImageTypeConverter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms
 
ImagePlusToOMEImageTypeConverter() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePlusToOMEImageTypeConverter
 
ImagePlusWindowImageJImporterUI - Class in org.hkijena.jipipe.extensions.imagejdatatypes.compat
Imports an ImagePlus
ImagePlusWindowImageJImporterUI(JIPipeWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ImagePlusWindowImageJImporterUI
 
ImagePropertiesToAnnotationAlgorithm - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms
Adds data annotations that contain the image properties
ImagePropertiesToAnnotationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
Creates a new instance
ImagePropertiesToAnnotationAlgorithm(ImagePropertiesToAnnotationAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
Creates a copy
ImageQueryExpressionVariablesInfo - Class in org.hkijena.jipipe.extensions.imagejdatatypes.parameters
 
ImageQueryExpressionVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.ImageQueryExpressionVariablesInfo
 
ImageROITargetArea - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.parameters
 
imagesHaveSameSize(ImagePlus...) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
imagesHaveSameSize(Collection<ImagePlus>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
ImageSliceCube - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
 
ImageSliceCube() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceCube
 
ImageSliceCube(ImageSliceIndex, ImageSliceIndex) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceCube
 
ImageSliceCube(ImageSliceCube) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceCube
 
ImageSliceIndex - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
Helper class that identifies an image slice.
ImageSliceIndex(int, int, int) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
Initializes a slice index
ImageSliceIndex() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
Initializes a slice index where all values are -1
ImageSliceIndex(ImageSliceIndex) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
Creates a copy
ImageSliceIndices - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
 
ImageSliceIndices() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndices
 
ImageSliceIndices(TIntList, TIntList, TIntList) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndices
 
ImageSliceIndices(ImageSliceIndices) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndices
 
ImagesNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories
 
ImagesNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory
 
ImageStackFromFolder - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources
Loads an image data from a file via IJ.openFile()
ImageStackFromFolder(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
 
ImageStackFromFolder(ImageStackFromFolder) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
Copies the algorithm
ImageStatistics5DExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
Variable source that contains image statistics
ImageStatistics5DExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageStatistics5DExpressionParameterVariablesInfo
 
ImageStatisticsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze
Wrapper around RoiManager
ImageStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm
Instantiates a new node type.
ImageStatisticsAlgorithm(ImageStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm
Instantiates a new node type.
ImageStatisticsExpressionAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze
Wrapper around RoiManager
ImageStatisticsExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm
Instantiates a new node type.
ImageStatisticsExpressionAlgorithm(ImageStatisticsExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm
Instantiates a new node type.
ImageStatisticsSetParameter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util.measure
A DynamicSetParameter that contains image statistics measurements.
ImageStatisticsSetParameter() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.ImageStatisticsSetParameter
 
ImageStatisticsSetParameter(ImageStatisticsSetParameter) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.ImageStatisticsSetParameter
 
ImageStatisticsSetParameter(Set<Measurement>) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.ImageStatisticsSetParameter
 
imageSubPixelCoordinateToScreen(Point2D.Double) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
Finds the screen coordinate for a pixel coordinate
imageToBase64(BufferedImage, String) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils
 
ImageToLUTTypeConverter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms
 
ImageToLUTTypeConverter() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImageToLUTTypeConverter
 
ImageToMatrixAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert
Algorithm that generates ResultsTableData as histogram
ImageToMatrixAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ImageToMatrixAlgorithm
Creates a new instance
ImageToMatrixAlgorithm(ImageToMatrixAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ImageToMatrixAlgorithm
Creates a copy
ImageToTableAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert
Algorithm that generates ResultsTableData as histogram
ImageToTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ImageToTableAlgorithm
Creates a new instance
ImageToTableAlgorithm(ImageToTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ImageToTableAlgorithm
Creates a copy
ImageToTableColumnAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert
 
ImageToTableColumnAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ImageToTableColumnAlgorithm
 
ImageToTableColumnAlgorithm(ImageToTableColumnAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ImageToTableColumnAlgorithm
 
ImageTypeConverter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms
Converts ImageJ data type into each other
ImageTypeConverter(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImageTypeConverter
Creates a new instance
ImageTypeConverter(ImageTypeConverter) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImageTypeConverter
Copies the algorithm
ImageTypeInfo - Annotation Type in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes
Carries information about an ImagePlusData type that can be used for filtering the image
ImageViewer2DCompositeLayerEditor - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d
 
ImageViewer2DCompositeLayerEditor(ImageViewerPanel2D, int) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DCompositeLayerEditor
 
ImageViewer2DDisplayRangeControl - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d
 
ImageViewer2DDisplayRangeControl(CalibrationPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl
 
ImageViewer2DDisplayRangeControl.DisplayRangeStop - Enum in org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d
 
ImageViewer2DDisplayRangeControl.ThumbRenderer - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d
 
ImageViewer2DDisplayRangeControl.TrackRenderer - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d
 
ImageViewer2DLUTEditor - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d
 
ImageViewer2DLUTEditor(JIPipeImageViewer, int) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DLUTEditor
 
ImageViewer2DUISettings - Class in org.hkijena.jipipe.extensions.imageviewer.settings
All settings for JIPipeGraphEditorUI
ImageViewer2DUISettings() - Constructor for class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer2DUISettings
 
ImageViewer3DDisplayRangeControl - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d
 
ImageViewer3DDisplayRangeControl(CalibrationPlugin3D) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl
 
ImageViewer3DDisplayRangeControl.DisplayRangeStop - Enum in org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d
 
ImageViewer3DDisplayRangeControl.ThumbRenderer - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d
 
ImageViewer3DDisplayRangeControl.TrackRenderer - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d
 
ImageViewer3DLUTEditor - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d
 
ImageViewer3DLUTEditor(JIPipeImageViewer, int) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DLUTEditor
 
ImageViewer3DOpacityLUTEditor - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d
 
ImageViewer3DOpacityLUTEditor(JIPipeImageViewer, int) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DOpacityLUTEditor
 
ImageViewer3DUISettings - Class in org.hkijena.jipipe.extensions.imageviewer.settings
All settings for JIPipeGraphEditorUI
ImageViewer3DUISettings() - Constructor for class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer3DUISettings
 
ImageViewerGeneralUISettings - Class in org.hkijena.jipipe.extensions.imageviewer.settings
All settings for JIPipeGraphEditorUI
ImageViewerGeneralUISettings() - Constructor for class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewerGeneralUISettings
 
ImageViewerLUTEditor - Class in org.hkijena.jipipe.extensions.imageviewer.utils
Based on JXGradientChooser
ImageViewerLUTEditor(JIPipeImageViewer, int) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerLUTEditor
 
ImageViewerOpacityLUTEditor - Class in org.hkijena.jipipe.extensions.imageviewer.utils
Based on JXGradientChooser
ImageViewerOpacityLUTEditor(JIPipeImageViewer, int) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerOpacityLUTEditor
 
ImageViewerPanel2D - Class in org.hkijena.jipipe.extensions.imageviewer
 
ImageViewerPanel2D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
Initializes a new image viewer
ImageViewerPanel2D.CompositeLayer - Class in org.hkijena.jipipe.extensions.imageviewer
 
ImageViewerPanel3D - Class in org.hkijena.jipipe.extensions.imageviewer
 
ImageViewerPanel3D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
ImageViewerPanel3D.ImageLoaderRun - Class in org.hkijena.jipipe.extensions.imageviewer
 
ImageViewerPanel3D.RendererStatus - Enum in org.hkijena.jipipe.extensions.imageviewer
 
ImageViewerPanel3D.UniverseInitializerRun - Class in org.hkijena.jipipe.extensions.imageviewer
 
ImageViewerPanel3D.UpdateLutAndCalibrationRun - Class in org.hkijena.jipipe.extensions.imageviewer
 
ImageViewerPanelCanvas2D - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d
 
ImageViewerPanelCanvas2D(ImageViewerPanel2D) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
ImageViewerPanelCanvas2D.PixelHoverEvent - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d
 
ImageViewerPanelCanvas2D.PixelHoverEventEmitter - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d
 
ImageViewerPanelCanvas2D.PixelHoverEventListener - Interface in org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d
 
ImageViewerPanelCanvas2D.ToolChangedEvent - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d
 
ImageViewerPanelCanvas2D.ToolChangedEventEmitter - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d
 
ImageViewerPanelCanvas2D.ToolChangedEventListener - Interface in org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d
 
ImageViewerPanelCanvas2DTool - Interface in org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d
ImageViewerUIFilamentDisplaySettings - Class in org.hkijena.jipipe.extensions.ijfilaments.settings
 
ImageViewerUIFilamentDisplaySettings() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.settings.ImageViewerUIFilamentDisplaySettings
 
ImageViewerUIROI2DDisplaySettings - Class in org.hkijena.jipipe.extensions.imagejdatatypes.settings
 
ImageViewerUIROI2DDisplaySettings() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.settings.ImageViewerUIROI2DDisplaySettings
 
ImageViewerUIROI3DDisplaySettings - Class in org.hkijena.jipipe.extensions.ij3d.imageviewer
 
ImageViewerUIROI3DDisplaySettings() - Constructor for class org.hkijena.jipipe.extensions.ij3d.imageviewer.ImageViewerUIROI3DDisplaySettings
 
ImageViewerUISpotsDisplaySettings - Class in org.hkijena.jipipe.extensions.ijtrackmate.settings
 
ImageViewerUISpotsDisplaySettings() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.settings.ImageViewerUISpotsDisplaySettings
 
ImageViewerUITracksDisplaySettings - Class in org.hkijena.jipipe.extensions.ijtrackmate.settings
 
ImageViewerUITracksDisplaySettings() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.settings.ImageViewerUITracksDisplaySettings
 
ImgUtils - Class in org.hkijena.jipipe.extensions.ilastik.utils
 
ImpImageData - Class in org.hkijena.jipipe.extensions.imp.datatypes
 
ImpImageData(BufferedImage) - Constructor for class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
ImpImageData(Map<ImageSliceIndex, BufferedImage>) - Constructor for class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
ImpImageData(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
ImpImageData(List<BufferedImage>, int, int, int) - Constructor for class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
ImpImageData(ImpImageData) - Constructor for class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
ImpImageDataBuilder - Class in org.hkijena.jipipe.extensions.imp.utils
 
ImpImageDataBuilder() - Constructor for class org.hkijena.jipipe.extensions.imp.utils.ImpImageDataBuilder
 
ImpImageDataImageViewerCustomLoader - Class in org.hkijena.jipipe.extensions.imp.utils
 
ImpImageDataImageViewerCustomLoader() - Constructor for class org.hkijena.jipipe.extensions.imp.utils.ImpImageDataImageViewerCustomLoader
 
ImpImageOutputFormat - Enum in org.hkijena.jipipe.extensions.imp.datatypes
 
ImpImageToImageJImageDataTypeConverter - Class in org.hkijena.jipipe.extensions.imp.datatypes
 
ImpImageToImageJImageDataTypeConverter() - Constructor for class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageToImageJImageDataTypeConverter
 
ImpImageUtils - Class in org.hkijena.jipipe.extensions.imp.utils
 
ImplicitImageTypeConverter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms
An implicit converter between ImagePlusData types
ImplicitImageTypeConverter(Class<? extends JIPipeData>, Class<? extends JIPipeData>) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImplicitImageTypeConverter
 
ImplicitPathTypeConverter - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Converts between the PathData types (non-trivial conversions)
ImplicitPathTypeConverter(Class<? extends JIPipeData>, Class<? extends JIPipeData>) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ImplicitPathTypeConverter
 
ImplicitResultsTableDataConverter - Class in org.hkijena.jipipe.extensions.annotation.algorithms
ImplicitResultsTableDataConverter() - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.ImplicitResultsTableDataConverter
 
ImportCellposeModelAlgorithm - Class in org.hkijena.jipipe.extensions.cellpose.algorithms
 
ImportCellposeModelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.cellpose.algorithms.ImportCellposeModelAlgorithm
 
ImportCellposeModelAlgorithm(ImportCellposeModelAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.cellpose.algorithms.ImportCellposeModelAlgorithm
 
ImportCellposeSizeModelAlgorithm - Class in org.hkijena.jipipe.extensions.cellpose.algorithms
 
ImportCellposeSizeModelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.cellpose.algorithms.ImportCellposeSizeModelAlgorithm
 
ImportCellposeSizeModelAlgorithm(ImportCellposeSizeModelAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.cellpose.algorithms.ImportCellposeSizeModelAlgorithm
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.compartments.datatypes.JIPipeCompartmentOutputData
 
importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compat.DataTableImageJDataImporter
 
importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compat.EmptyImageJDataImporter
 
importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.compat.ImageJDataImporter
Imports JIPipe data from ImageJ
importData(Object, ImageJImportParameters, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.compat.ImageJDataImporter
Imports JIPipe data from ImageJ.
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Imports this data from the path
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.data.JIPipeEmptyData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeEmptyThumbnailData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData
 
importData(JIPipeReadDataStorage, Class<T>) - Static method in class org.hkijena.jipipe.api.data.utils.JIPipeSerializedJsonObjectData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.data.utils.JIPipeWeakDataReferenceData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.cellpose.compat.CellposeModelImageJImporter
 
importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.cellpose.compat.CellposeSizeModelImageJImporter
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeModelData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeSizeModelData
 
importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.clij2.compat.CLIJ2DataFromImageWindowImageJImporter
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageData
 
importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.compat.PathDataFromTableImageJImporter
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.filesystem.dataypes.FileData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.filesystem.dataypes.FolderData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.filesystem.dataypes.PathData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.forms.datatypes.BooleanFormData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.forms.datatypes.DoubleFormData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.forms.datatypes.EnumFormData
 
importData(JIPipeReadDataStorage, Class<T>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.forms.datatypes.FormData
Helper method that simplifies the importData() method definition
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.forms.datatypes.GroupHeaderFormData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.forms.datatypes.IntegerFormData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.forms.datatypes.StringFormData
 
importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.compat.ROI3DImageJImporter
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
importData(Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.ModelData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotDetectorData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotsCollectionData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotTrackerData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.ijweka.datatypes.WekaModelData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.ilastik.datatypes.IlastikModelData
 
importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.compat.IJ2DataFromImageWindowImageJImporter
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.ImageJ2DatasetData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.BorderImageJ2OutOfBoundsFactoryData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.ByteConstantValueImageJ2OutOfBoundsFactoryData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.DoubleConstantValueImageJ2OutOfBoundsFactoryData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.FloatConstantValueImageJ2OutOfBoundsFactoryData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.IntegerConstantValueImageJ2OutOfBoundsFactoryData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.LongConstantValueImageJ2OutOfBoundsFactoryData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.ShortConstantValueImageJ2OutOfBoundsFactoryData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.EmptyImageJ2OutOfBoundsFactory
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.MirrorImageJ2OutOfBoundsFactoryData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.PeriodicImageJ2OutOfBoundsFactoryData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.DiamondImageJ2ShapeData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.DiamondTipsImageJ2ShapeData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.EmptyImageJ2ShapeData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HyperSphereImageJ2ShapeData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.PairOfPointsImageJ2ShapeData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.RectangleImageJ2ShapeData
 
importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ImagePlusDataFromImageWindowImageJImporter
 
importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.OMEImageFromImageWindowImageJImporter
 
importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.RoiManagerImageJImporter
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorHSBData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorLABData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorRGBData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorHSBData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorLABData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorRGBData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale16UData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale32FData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale8UData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleMaskData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.ImagePlus2DData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorHSBData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorLABData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorRGBData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale16UData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale32FData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale8UData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleMaskData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.ImagePlus3DData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorHSBData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorLABData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorRGBData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale16UData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale32FData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale8UData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleMaskData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.ImagePlus4DData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorHSBData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorLABData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorRGBData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale16UData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale32FData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale8UData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleMaskData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.ImagePlus5DData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFT2DData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFT3DData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFT4DData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFT5DData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFTData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale16UData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale32FData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale8UData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleMaskData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.LUTData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.OMEImageData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Loads Roi from a path that contains a zip/roi file
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.multiparameters.datatypes.ParametersData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROAnnotationReferenceData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.omero.datatypes.OMERODatasetReferenceData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROGroupReferenceData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROImageReferenceData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROProjectReferenceData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.plots.datatypes.BarBoxAndWhiskerCategoryPlotData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.plots.datatypes.BarCategoryPlotData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.plots.datatypes.BarStatisticalCategoryPlotData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.plots.datatypes.LineCategoryPlotData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.plots.datatypes.LineStatisticalCategoryPlotData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.plots.datatypes.LineXYPlotData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.plots.datatypes.Pie2DPlotData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.plots.datatypes.Pie3DPlotData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
importData(JIPipeReadDataStorage, Class<T>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotDataSeries
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.plots.datatypes.ScatterXYPlotData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.plots.datatypes.StackedBarCategoryPlotData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.strings.JsonData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.strings.StringData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.strings.XMLData
 
importData(List<Object>, ImageJImportParameters, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.compat.ResultsTableDataImageJImporter
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.tables.datatypes.AnnotationTableData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.tables.datatypes.DoubleArrayTableColumn
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.tables.datatypes.FloatArrayTableColumn
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.tables.datatypes.RowIndexTableColumn
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.tables.datatypes.StringArrayTableColumn
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.tables.datatypes.ZeroTableColumn
 
importData(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.utils.datatypes.JIPipeOutputData
 
importData(JIPipeReadDataStorage, Class<T>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.JIPipe
Imports data of given data type from its output folder.
importData(PlotDataSeries) - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
Adds data into the data storage
importData(TableModel, String) - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
Imports data from a table model
ImportDataRowFolder - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
 
ImportDataRowFolder(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataRowFolder
 
ImportDataRowFolder(ImportDataRowFolder) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataRowFolder
 
ImportDataRun(Path, Class<? extends JIPipeData>, JIPipeDataTableMetadataRow) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation.ImportDataRun
 
ImportDataTableArchive - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
 
ImportDataTableArchive(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableArchive
 
ImportDataTableArchive(ImportDataTableArchive) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableArchive
 
ImportDataTableDirectory - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
 
ImportDataTableDirectory(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableDirectory
 
ImportDataTableDirectory(ImportDataTableDirectory) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableDirectory
 
importExistingPlot(PlotData) - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
Imports an existing plot data into this builder.
ImportFilamentsFromJsonAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.generate
 
ImportFilamentsFromJsonAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.ImportFilamentsFromJsonAlgorithm
 
ImportFilamentsFromJsonAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.ImportFilamentsFromJsonAlgorithm
 
ImportIlastikHDF5ImageAlgorithm - Class in org.hkijena.jipipe.extensions.ilastik.nodes
 
ImportIlastikHDF5ImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.ImportIlastikHDF5ImageAlgorithm
 
ImportIlastikHDF5ImageAlgorithm(ImportIlastikHDF5ImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.ImportIlastikHDF5ImageAlgorithm
 
ImportIlastikModel - Class in org.hkijena.jipipe.extensions.ilastik.nodes
 
ImportIlastikModel(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.ImportIlastikModel
 
ImportIlastikModel(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.ImportIlastikModel
 
ImportImageJPathDataOperation - Class in org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis
 
ImportImageJPathDataOperation() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImportImageJPathDataOperation
 
importImagePlusFrom(JIPipeReadDataStorage, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
importImages(ImportLibrary, OMEROMetadataStoreClient, ImportConfig, ImportCandidates) - Static method in class org.hkijena.jipipe.extensions.omero.util.OMEROUtils
Copy of importCandidates in ImportLibrary that returns the list of uploaded images.
ImportImpImageAlgorithm - Class in org.hkijena.jipipe.extensions.imp.nodes
 
ImportImpImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imp.nodes.ImportImpImageAlgorithm
 
ImportImpImageAlgorithm(ImportImpImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imp.nodes.ImportImpImageAlgorithm
 
importInputsFromImageJ(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration
Pushes selected ImageJ data into the algorithm input slots
ImportJIPipeProjectDataOperation - Class in org.hkijena.jipipe.extensions.utils.display
 
ImportJIPipeProjectDataOperation() - Constructor for class org.hkijena.jipipe.extensions.utils.display.ImportJIPipeProjectDataOperation
 
ImportJIPipeSlotFolderAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms
 
ImportJIPipeSlotFolderAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.ImportJIPipeSlotFolderAlgorithm
 
ImportJIPipeSlotFolderAlgorithm(ImportJIPipeSlotFolderAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.ImportJIPipeSlotFolderAlgorithm
 
ImportJsonAlgorithm - Class in org.hkijena.jipipe.extensions.strings.datasources
 
ImportJsonAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.strings.datasources.ImportJsonAlgorithm
 
ImportJsonAlgorithm(ImportJsonAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.strings.datasources.ImportJsonAlgorithm
 
importLUT(LUT, boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerLUTEditor
Imports a LUT into the editor.
importLUT(LUTData) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerLUTEditor
 
importLUT(LUT, boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerOpacityLUTEditor
Imports a LUT into the editor.
importLUT(LUTData) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerOpacityLUTEditor
 
ImportLUTAsRGBFromFile - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources
 
ImportLUTAsRGBFromFile(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ImportLUTAsRGBFromFile
 
ImportLUTAsRGBFromFile(ImportLUTAsRGBFromFile) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ImportLUTAsRGBFromFile
 
importParametersFromProject(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm
 
importParametersFromProject(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.JIPipeProjectParameterDefinition
 
importParametersFromProject(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.PathsToJIPipeProjectParametersAlgorithm
 
ImportRDatasetAlgorithm - Class in org.hkijena.jipipe.extensions.r.algorithms
 
ImportRDatasetAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm
 
ImportRDatasetAlgorithm(ImportRDatasetAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm
 
ImportRDatasetAlgorithm.Dataset - Enum in org.hkijena.jipipe.extensions.r.algorithms
 
ImportRDatasetAlgorithm.DatasetEnumItemInfo - Class in org.hkijena.jipipe.extensions.r.algorithms
 
ImportROI3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes
 
ImportROI3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.ImportROI3DAlgorithm
 
ImportROI3DAlgorithm(ImportROI3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.ImportROI3DAlgorithm
 
importROIs(ROIListData) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
importROIs(ROIListData, boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
importROIsFromManager(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
ImportStringAlgorithm - Class in org.hkijena.jipipe.extensions.strings.datasources
 
ImportStringAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.strings.datasources.ImportStringAlgorithm
 
ImportStringAlgorithm(ImportStringAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.strings.datasources.ImportStringAlgorithm
 
importTableFromCSV(Path, JIPipeProjectWorkbench) - Static method in class org.hkijena.jipipe.ui.tableeditor.TableEditor
Imports a table from CSV and creates a new editor tab
ImportWekaModelFromFileAlgorithm - Class in org.hkijena.jipipe.extensions.ijweka.nodes
 
ImportWekaModelFromFileAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijweka.nodes.ImportWekaModelFromFileAlgorithm
 
ImportWekaModelFromFileAlgorithm(ImportWekaModelFromFileAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijweka.nodes.ImportWekaModelFromFileAlgorithm
 
ImportXMLAlgorithm - Class in org.hkijena.jipipe.extensions.strings.datasources
 
ImportXMLAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.strings.datasources.ImportXMLAlgorithm
 
ImportXMLAlgorithm(ImportXMLAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.strings.datasources.ImportXMLAlgorithm
 
ImposeMaxima2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local
 
ImposeMaxima2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ImposeMaxima2DAlgorithm
Instantiates a new node type.
ImposeMaxima2DAlgorithm(ImposeMaxima2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ImposeMaxima2DAlgorithm
Instantiates a new node type.
ImposeMaxima3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local
 
ImposeMaxima3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ImposeMaxima3DAlgorithm
Instantiates a new node type.
ImposeMaxima3DAlgorithm(ImposeMaxima3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ImposeMaxima3DAlgorithm
Instantiates a new node type.
ImpPlugin - Class in org.hkijena.jipipe.extensions.imp
Python nodes
ImpPlugin() - Constructor for class org.hkijena.jipipe.extensions.imp.ImpPlugin
 
INACTIVE_CONTROL_TEXT_COLOR - Static variable in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
 
INACTIVE_CONTROL_TEXT_COLOR - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
include(RowFilter.Entry<? extends TableModel, ? extends Integer>) - Method in class org.hkijena.jipipe.ui.components.search.ExtendedDataTableSearchTextFieldTableRowFilter
 
include(RowFilter.Entry<? extends TableModel, ? extends Integer>) - Method in class org.hkijena.jipipe.ui.components.search.SearchTextFieldTableRowFilter
 
include(RowFilter.Entry<? extends TableModel, ? extends Integer>) - Method in class org.hkijena.jipipe.ui.ijupdater.FileTableModelFilter
 
includes(int, ROI3DMeasurement) - Static method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurement
 
includes(int, ROI3DRelationMeasurement) - Static method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurement
 
includes(int, ROI2DRelationMeasurement) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurement
 
includes(int, Measurement) - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.Measurement
 
includes(int, RoiRelationMeasurement) - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.RoiRelationMeasurement
 
incrementProgress() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
indented - Variable in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
Index() - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.Index
Creates a new instance.
Index(int, int) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.Index
Creates a new instance and initializes it
indexOf(Object) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
indexOf(JIPipeRuntimePartition) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration
 
indexOf(Object) - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
InequalityPredicateOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
InequalityPredicateOperator(String, int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.InequalityPredicateOperator
 
info(Object, String) - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROToJIPipeLogger
 
info(Object, LogMessage) - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROToJIPipeLogger
 
InheritanceConversionEditorUI - Class in org.hkijena.jipipe.ui.components
Editor for an inheritance conversion stored in an JIPipeDataSlotInfo
InheritanceConversionEditorUI(Map<JIPipeDataInfo, JIPipeDataInfo>) - Constructor for class org.hkijena.jipipe.ui.components.InheritanceConversionEditorUI
 
inheritedSlot() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeOutputSlot
Deprecated.
InheritedSlotListCellRenderer - Class in org.hkijena.jipipe.ui.components.renderers
Renders an available entry for inherited slot in JIPipeDataSlotInfo
InheritedSlotListCellRenderer(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.ui.components.renderers.InheritedSlotListCellRenderer
 
init(MouseEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
This method should be called when a new transformation is started (i.e.
initialise(int, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines
Initialises the hough array.
initialise(Graphics2D, Rectangle2D, CategoryPlot, int, PlotRenderingInfo) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Initialises the renderer.
initialize() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
initialize(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.OMEAccessorStorage
 
initialize() - Method in class org.hkijena.jipipe.JIPipe
Initializes JIPipe.
initialize(ExtensionSettings, JIPipeRegistryIssues) - Method in class org.hkijena.jipipe.JIPipe
Initializes JIPipe
initialize() - Method in class org.hkijena.jipipe.JIPipeRunAlgorithmCommand
 
initialize() - Method in class org.hkijena.jipipe.JIPipeRunCustomAlgorithmCommand
 
initializeAddDataSourceMenu(JIPipeGraphEditorUI, JMenu, Set<JIPipeNodeInfo>) - Static method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.JIPipePipelineGraphEditorUI
Initializes a menu that adds data sources
initializeAddNodesMenus(JIPipeGraphEditorUI, JMenuBar, Set<JIPipeNodeInfo>) - Static method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.JIPipePipelineGraphEditorUI
Initializes the "Add nodes" menus
initializeAddNodesMenus() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.JIPipeCompartmentsGraphEditorUI
Initializes the "Add nodes" area
initializeCLIJ(Context, boolean) - Static method in class org.hkijena.jipipe.extensions.clij2.CLIJSettings
Initializes CLIJ based on the settings
initializeCommonActions() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
Initializes the tool bar
initializeLibNoImageJ(List<Class<? extends JIPipeJavaPlugin>>) - Method in class org.hkijena.jipipe.JIPipe
Initializes JIPipe as part of a library with a custom initialization step No settings are loaded and SciJava services are not used.
initializeMenuForCategory(JIPipeGraphEditorUI, JMenu, JIPipeNodeTypeCategory, Set<JIPipeNodeInfo>) - Static method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.JIPipePipelineGraphEditorUI
Initializes a menu for one algorithm category
initializePlugins(List<Class<? extends JIPipeImageViewerPlugin>>, Map<Class<?>, Object>) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.CachedFilamentsDataViewerWindow
 
initializePlugins(List<Class<? extends JIPipeImageViewerPlugin>>, Map<Class<?>, Object>) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.CachedSpotCollectionDataViewerWindow
 
initializePlugins(List<Class<? extends JIPipeImageViewerPlugin>>, Map<Class<?>, Object>) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.CachedTracksCollectionDataViewerWindow
 
initializePlugins(List<Class<? extends JIPipeImageViewerPlugin>>, Map<Class<?>, Object>) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerCacheDataViewerWindow
Override this method to register plugins and set context objects By default, it will register JIPipeImageViewer.DEFAULT_PLUGINS and the window as context object (accessor JIPipeCacheDataViewerWindow)
initializeSettings(ImagePlus, ImagePlus, ImagePlus, AutoThresholdRegression.Implementation, boolean, boolean, boolean, boolean, boolean, boolean, boolean, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.CustomColoc2
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin
Called when the form panel should be recreated
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.AnimationSpeedPlugin2D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.AnnotationInfoPlugin2D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.CalibrationPlugin2D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.CompositeManagerPlugin2D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.LUTManagerPlugin2D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.EllipseMaskDrawer2DTool
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskToROIDrawerPlugin2D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MeasurementDrawerPlugin2D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PencilMaskDrawer2DTool
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PolygonMaskDrawer2DTool
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.RectangleMaskDrawer2DTool
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.PixelInfoPlugin2D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.AnimationSpeedPlugin3D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.AnnotationInfoPlugin3D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.CalibrationPlugin3D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.LUTManagerPlugin3D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.OpacityManagerPlugin3D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.RenderSettingsPlugin3D
 
initializeSettingsPanel(FormPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D
 
initializeUpdateSites() - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager
 
initializeVariablesIfNeeded() - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotFeatureVariablesInfo
 
initializeVariablesIfNeeded() - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackFeatureVariablesInfo
 
initializeVariablesIfNeeded() - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackSpotFeatureVariablesInfo
 
InnerMargin - Class in org.hkijena.jipipe.extensions.parameters.library.roi
Related to Margin, but with fixed-size objects
InnerMargin() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.InnerMargin
Creates a new instance
InnerMargin(InnerMargin) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.InnerMargin
Creates a copy
InnerMargin.List - Class in org.hkijena.jipipe.extensions.parameters.library.roi
List parameter of InnerMargin
InnerMarginEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.roi
Editor for FixedMargin
InnerMarginEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.InnerMarginEditorUI
 
INPUT_PRETRAINED_MODEL - Static variable in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
INPUT_PRETRAINED_MODEL - Static variable in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
INPUT_PRETRAINED_MODEL - Static variable in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
INPUT_PRETRAINED_MODEL - Static variable in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
inputBlockDims(long[], int[]) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.ImgUtils
Compute block dimensions suitable for reading.
InputEntry(ImagePlus, List<JIPipeTextAnnotation>, JIPipeExpressionVariablesMap) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.InputEntry
 
InputImagesToMontage - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage
Deprecated.
InputImagesToMontage(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
InputImagesToMontage(InputImagesToMontage) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
InputImagesToMontage2 - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage
 
InputImagesToMontage2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage2
 
InputImagesToMontage2(InputImagesToMontage2) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage2
 
InputSlotMapParameterCollection - Class in org.hkijena.jipipe.extensions.parameters.library.graph
Parameter that holds a value for each data slot
InputSlotMapParameterCollection(Class<?>, JIPipeGraphNode, Function<JIPipeDataSlotInfo, Object>, boolean) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.graph.InputSlotMapParameterCollection
Creates a new instance
InputSlotMapParameterCollection(Class<?>, JIPipeGraphNode, Function<JIPipeDataSlotInfo, Object>) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.graph.InputSlotMapParameterCollection
Creates a new instance
InputSlotMapParameterCollection(Class<?>, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.graph.InputSlotMapParameterCollection
Creates a new instance
inputSlotsToPython(StringBuilder, Map<String, Path>) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
 
inputSlotsToR(StringBuilder, Map<String, Path>, List<JIPipeInputDataSlot>) - Static method in class org.hkijena.jipipe.extensions.r.RUtils
 
insertAtCaret(String, boolean) - Method in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderUI
 
insertBrackets() - Method in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderUI
 
insertFunction(JIPipeExpressionRegistry.ExpressionFunctionEntry, List<ExpressionBuilderParameterUI>) - Method in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderUI
 
insertNode(UUID, JIPipeGraphNode, UUID) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Inserts an algorithm into the graph
insertNode(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Inserts a node into the graph.
insertNode(JIPipeGraphNode, UUID) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Inserts a node into the graph.
insertOperator(ExpressionOperatorEntry, List<ExpressionBuilderParameterUI>) - Method in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderUI
 
insertUpdate(DocumentEvent) - Method in class org.hkijena.jipipe.ui.components.DocumentChangeListener
 
insertVariableAtCaret(String) - Method in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderUI
 
install(ImageJ2OpNode, ModuleItem<?>) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.DataSlotModuleInput
 
install(ImageJ2OpNodeInfo, ModuleItem<?>) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.DataSlotModuleInput
 
install(ImageJ2OpNode, ModuleItem<?>) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.DataSlotModuleOutput
 
install(ImageJ2OpNodeInfo, ModuleItem<?>) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.DataSlotModuleOutput
 
install(ImageJ2OpNodeInfo, ModuleItem<?>) - Method in interface org.hkijena.jipipe.extensions.imagej2.io.ImageJ2ModuleIO
Applies changes to an ImageJ2OpNodeInfo required for this IO
install(ImageJ2OpNode, ModuleItem<?>) - Method in interface org.hkijena.jipipe.extensions.imagej2.io.ImageJ2ModuleIO
Applies changes to an ImageJ2OpNode required for this IO
install(ImageJ2OpNodeInfo, ModuleItem<?>) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.ParameterImageJ2ModuleInput
 
install(ImageJ2OpNode, ModuleItem<?>) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.ParameterImageJ2ModuleInput
 
install(ImageJ2OpNodeInfo, ModuleItem<?>) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput
 
install(ImageJ2OpNode, ModuleItem<?>) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput
 
install(ImageJ2OpNodeInfo, ModuleItem<?>) - Method in class org.hkijena.jipipe.extensions.imagej2.io.ServiceImageJ2ModuleIO
 
install(ImageJ2OpNode, ModuleItem<?>) - Method in class org.hkijena.jipipe.extensions.imagej2.io.ServiceImageJ2ModuleIO
 
install(Path) - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
Installs Miniconda
install() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCachedDataDisplayCacheControl
 
install() - Static method in class org.hkijena.jipipe.ui.running.JIPipeRunQueueNotifier
Installs the notifier.
install() - Method in enum org.hkijena.jipipe.ui.theme.JIPipeUITheme
Activates the theme.
installAdapterCodeIfNeeded(StringBuilder) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
 
installComponentHighlighter(JComponent, Set<Component>) - Method in class org.hkijena.jipipe.ui.components.FormPanel
 
installComponents(JFileChooser) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser.FileChooserComponentUI
 
installContextActionsInto(JToolBar, Set<JIPipeGraphNodeUI>, List<NodeUIContextAction>, JIPipeGraphCanvasUI) - Static method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
installDefaults() - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
InstallerEntry(Class<? extends ExternalEnvironmentInstaller>, Icon) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry.InstallerEntry
 
installEvents() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Install registration events.
installExtension(JIPipeWorkbench, JIPipeJsonPlugin, boolean, boolean) - Static method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
Installs a loaded project
installExtensionFromFile(JIPipeWorkbench, Path, boolean, boolean) - Static method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
Loads a project and installs it
installExtensions(JIPipeWorkbench) - Static method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
Allows the user to select files to install
installInputLoaderCode(StringBuilder) - Static method in class org.hkijena.jipipe.extensions.r.RUtils
 
installInputSlots(StringBuilder, JIPipeSingleIterationStep, JIPipeGraphNode, List<JIPipeInputDataSlot>, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
 
installInputSlots(StringBuilder, List<JIPipeInputDataSlot>, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
 
installInputSlots(StringBuilder, JIPipeMultiIterationStep, JIPipeGraphNode, List<JIPipeInputDataSlot>, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
 
installMenuExtension(JIPipeWorkbench, JMenu, JIPipeMenuExtensionTarget, boolean) - Static method in class org.hkijena.jipipe.utils.UIUtils
Installs an extension menu
installOutputGeneratorCode(StringBuilder) - Static method in class org.hkijena.jipipe.extensions.r.RUtils
 
installOutputSlots(StringBuilder, List<JIPipeOutputDataSlot>, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
 
installPostprocessorCode(StringBuilder) - Static method in class org.hkijena.jipipe.extensions.r.RUtils
 
installRefreshOnActivate(Runnable) - Method in class org.hkijena.jipipe.ui.cache.JIPipeCachedDataDisplayCacheControl
 
installTool(MaskDrawer2DTool) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
installUIOverrideParameterEditor(ParameterPanel, JIPipeParameterEditorUI) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParametersAlgorithm
 
installUIOverrideParameterEditor(ParameterPanel, JIPipeParameterEditorUI) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection
Allows to replace the UI that is inserted into the parameter panel with a different component Labels are not affected Please note that the root parameter collection handles this task for all sub-parameters
installUIParameterOptions(ParameterPanel, JIPipeParameterEditorUI, JPopupMenu) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParametersAlgorithm
 
installUIParameterOptions(ParameterPanel, JIPipeParameterEditorUI, JPopupMenu) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection
Allows to install additional operations into the context menu of each parameter (triangle menu next to the help) Please note that the root parameter collection handles this task for all sub-parameters
INSTANCE - Static variable in class org.hkijena.jipipe.extensions.ij3d.imageviewer.Measurement3DSettings
 
INSTANCE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.GreyscaleColorSpace
 
INSTANCE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.HSBColorSpace
 
INSTANCE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.LABColorSpace
 
INSTANCE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.RGBColorSpace
 
INSTANCE - Static variable in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.Measurement2DSettings
 
INSTANCE - Static variable in class org.hkijena.jipipe.utils.NaturalOrderComparator
 
InstantFuture<T> - Class in org.hkijena.jipipe.utils
A dummy Future
InstantFuture(T) - Constructor for class org.hkijena.jipipe.utils.InstantFuture
Initializes a new instance
IntegerAndIntegerPairParameter - Class in org.hkijena.jipipe.extensions.parameters.library.pairs
A parameter that renames an integer into another integer
IntegerAndIntegerPairParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.IntegerAndIntegerPairParameter
Creates a new instance
IntegerAndIntegerPairParameter(int, int) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.IntegerAndIntegerPairParameter
 
IntegerAndIntegerPairParameter(IntegerAndIntegerPairParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.IntegerAndIntegerPairParameter
Creates a copy
IntegerAndIntegerPairParameter.List - Class in org.hkijena.jipipe.extensions.parameters.library.pairs
A collection of multiple IntegerAndIntegerPairParameter
IntegerArrayParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays
 
IntegerArrayParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.IntegerArrayParameterImageJ2ModuleInput
 
IntegerConstantValueImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant
 
IntegerConstantValueImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.IntegerConstantValueImageJ2OutOfBoundsFactoryData
 
IntegerConstantValueImageJ2OutOfBoundsFactoryData(OutOfBoundsConstantValueFactory<?, ?>) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.IntegerConstantValueImageJ2OutOfBoundsFactoryData
 
IntegerConstantValueImageJ2OutOfBoundsFactoryData(IntegerConstantValueImageJ2OutOfBoundsFactoryData) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.IntegerConstantValueImageJ2OutOfBoundsFactoryData
 
IntegerFormData - Class in org.hkijena.jipipe.extensions.forms.datatypes
 
IntegerFormData() - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.IntegerFormData
 
IntegerFormData(IntegerFormData) - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.IntegerFormData
 
IntegerFormGeneratorAlgorithm - Class in org.hkijena.jipipe.extensions.forms.algorithms.generators
 
IntegerFormGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.generators.IntegerFormGeneratorAlgorithm
 
IntegerFormGeneratorAlgorithm(IntegerFormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.generators.IntegerFormGeneratorAlgorithm
 
IntegerList - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.list
A list of Integer
IntegerList() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.list.IntegerList
Creates a new empty list
IntegerList(IntegerList) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.list.IntegerList
Creates a copy
IntegerParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives
 
IntegerParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.IntegerParameterImageJ2ModuleInput
 
IntegerParameterImageJ2ModuleOutput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives
 
IntegerParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.IntegerParameterImageJ2ModuleOutput
 
IntegerRange - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.ranges
Parameter that contains an integer range as string.
IntegerRange() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRange
Creates a new instance with a null value
IntegerRange(String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRange
Creates a new instance and initializes it
IntegerRange(IntegerRange) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRange
Creates a copy
IntegerRange.VariablesInfo - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.ranges
 
IntegerRangeParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.ranges
Editor for IntegerRange
IntegerRangeParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRangeParameterEditorUI
 
integral - Variable in enum org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetType
true for integers, false for floats.
IntegrateColumnsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes
Algorithm that integrates columns
IntegrateColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.IntegrateColumnsAlgorithm
Creates a new instance
IntegrateColumnsAlgorithm(IntegrateColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.IntegrateColumnsAlgorithm
Creates a copy
IntegratingColumnOperation - Interface in org.hkijena.jipipe.extensions.tables
A ColumnOperation that creates an integrated output (meaning that the output only contains one entry)
IntegratingColumnOperationEntry(String, String, IntegratingColumnOperation) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.IntegratingColumnOperationEntry
Creates a new entry
IntegratingTableColumnProcessorParameter - Class in org.hkijena.jipipe.extensions.tables.parameters.processors
A parameter that models processing an input column via an integration function and generating an output column
IntegratingTableColumnProcessorParameter() - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.processors.IntegratingTableColumnProcessorParameter
 
IntegratingTableColumnProcessorParameter(IntegratingTableColumnProcessorParameter) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.processors.IntegratingTableColumnProcessorParameter
 
IntegratingTableColumnProcessorParameterList - Class in org.hkijena.jipipe.extensions.tables.parameters.collections
 
IntegratingTableColumnProcessorParameterList() - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.collections.IntegratingTableColumnProcessorParameterList
Creates a new instance
IntegratingTableColumnProcessorParameterList(IntegratingTableColumnProcessorParameterList) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.collections.IntegratingTableColumnProcessorParameterList
Creates a copy
InternalErrorValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts
 
InternalErrorValidationReportContext() - Constructor for class org.hkijena.jipipe.api.validation.contexts.InternalErrorValidationReportContext
 
InternalErrorValidationReportContext(JIPipeValidationReportContext) - Constructor for class org.hkijena.jipipe.api.validation.contexts.InternalErrorValidationReportContext
 
InternalGradientSegmentation2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
Internal gradient segmenter
InternalGradientSegmentation2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
InternalGradientSegmentation2DAlgorithm(InternalGradientSegmentation2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
Copies the algorithm
InternalNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories
 
InternalNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory
 
InterpolationMethod - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.parameters
Available interpolation methods
InterruptedEvent(JIPipeRunWorker, Throwable) - Constructor for class org.hkijena.jipipe.api.JIPipeRunnable.InterruptedEvent
 
InterruptedEventEmitter() - Constructor for class org.hkijena.jipipe.api.JIPipeRunnable.InterruptedEventEmitter
 
interruptThreads(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Hough_Circle
 
intersect(RectangularLine) - Method in class org.hkijena.jipipe.ui.grapheditor.general.connections.RectangularLine
Returns number of pixels that intersect with another line
intersectROI(Roi, Roi) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
IntervalImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.data.input
Handling of Interval, assumed to be ImgPlus It is assumed that these refer to images (conversion to ImageJ2DatasetData)
IntervalImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.data.input.IntervalImageJ2ModuleInput
 
IntervalImageJ2ModuleOutput - Class in org.hkijena.jipipe.extensions.imagej2.io.data.output
Handling of Interval, assumed to be ImgPlus It is assumed that these refer to images (conversion to ImageJ2DatasetData)
IntervalImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.data.output.IntervalImageJ2ModuleOutput
 
IntNumberRangeParameter - Class in org.hkijena.jipipe.extensions.parameters.library.ranges
 
IntNumberRangeParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.ranges.IntNumberRangeParameter
 
IntNumberRangeParameter(IntNumberRangeParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.ranges.IntNumberRangeParameter
 
IntNumberRangeParameter(float, float) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.ranges.IntNumberRangeParameter
 
IntParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Info for Integer
IntParameterTypeInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.IntParameterTypeInfo
 
IntPrimitiveParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Info for Integer
IntPrimitiveParameterTypeInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.IntPrimitiveParameterTypeInfo
 
IntRangeAndIntegerPairParameter - Class in org.hkijena.jipipe.extensions.parameters.library.pairs
A parameter that renames an integer into another integer
IntRangeAndIntegerPairParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.IntRangeAndIntegerPairParameter
Creates a new instance
IntRangeAndIntegerPairParameter(IntRangeAndIntegerPairParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.IntRangeAndIntegerPairParameter
Creates a copy
IntRangeAndIntegerPairParameter.List - Class in org.hkijena.jipipe.extensions.parameters.library.pairs
A collection of multiple IntRangeAndIntegerPairParameter
INVALID_FILESYSTEM_CHARACTERS - Static variable in class org.hkijena.jipipe.utils.StringUtils
 
INVALID_JSONIFY_CHARACTERS - Static variable in class org.hkijena.jipipe.utils.StringUtils
 
invalidateAssets() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode
 
InvalidProjectDependenciesInfoDialog - Class in org.hkijena.jipipe.ui.project
Shown when potential issues are detected with the project
InvalidProjectDependenciesInfoDialog(JIPipeWorkbench, Path, Set<JIPipeDependency>, Set<JIPipeImageJUpdateSiteDependency>) - Constructor for class org.hkijena.jipipe.ui.project.InvalidProjectDependenciesInfoDialog
 
InvertColorsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color
Wrapper around ImageProcessor
InvertColorsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.InvertColorsAlgorithm
Instantiates a new node type.
InvertColorsAlgorithm(InvertColorsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.InvertColorsAlgorithm
Instantiates a new node type.
InvertFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
InvertFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.InvertFunction
 
invertRGB(Color) - Static method in class org.hkijena.jipipe.utils.ColorUtils
 
invertRGBA(Color) - Static method in class org.hkijena.jipipe.utils.ColorUtils
 
invertSelection() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
InvertSelectionNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
InvertSelectionNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.InvertSelectionNodeUIContextAction
 
invokeMethod(Object, String, Object...) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
Calls a function and returns its output
invokeScrollToTop(JScrollPane) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
IOInterfaceAlgorithm - Class in org.hkijena.jipipe.api.compartments.algorithms
Algorithm that passes the input to the output
IOInterfaceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.compartments.algorithms.IOInterfaceAlgorithm
Creates a new instance.
IOInterfaceAlgorithm(IOInterfaceAlgorithm) - Constructor for class org.hkijena.jipipe.api.compartments.algorithms.IOInterfaceAlgorithm
Creates a copy of the other algorithm
is2D() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
is2D() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageDimensions
 
is3D() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageDimensions
 
is4D() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageDimensions
 
is5D() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageDimensions
 
isAbove() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeatureFilterParameter
 
isAbove() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeatureFilterParameter
 
isAbsoluteCoordinates() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.Warp2DAlgorithm
 
isAbstractOrInterface(Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
 
isAccessAnnotations() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ModifyPath
 
isAccessPixels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm
 
isAccessPixels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm
 
isAccessPixels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm
 
isAccessPixels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm
 
isAccessPixels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm
 
isAccessPixels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm
 
isActivate() - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters
 
isActivated() - Method in interface org.hkijena.jipipe.JIPipePlugin
Returns true if the extension is activated.
isActivated() - Method in class org.hkijena.jipipe.ui.extensions.UpdateSitePlugin
 
isAddAcknowledgements() - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
isAddAnnotations() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.CountROIAlgorithm
 
isAddAsAnnotations() - Method in class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableByColumnsAlgorithm
 
isAddAuthors() - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
isAddBorder() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm
 
isAddCitation() - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
isAddContextActionsToContextMenu() - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
isAddDependencies() - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
isAddDependencyCitations() - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
isAddDescription() - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
isAddFileExtension() - Method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
 
isAddLastIdentityField() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm
 
isAddLastIdentityField() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm
 
isAddLastIdentityField() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm
 
isAddLicence() - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
isAddListOfUsedNodes() - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
isAddNameToTable() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm
 
isAddPipelineTextDescription() - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
isAddSummary() - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
isAddTitle() - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
isAddToProject() - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderDialog
 
isAddToSelection() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.NodeUISelectedEvent
 
isAddWebsite() - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
isAllChannels() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeChannelSettings
 
isAllowCache() - Method in class org.hkijena.jipipe.extensions.settings.RuntimeSettings
 
isAllowDefaultCollapsedParameters() - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
isAllowExisting() - Method in class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox
 
isAllowMerging() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings
 
isAllowNew() - Method in class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox
 
isAllowSkipAlgorithmsWithoutInput() - Method in class org.hkijena.jipipe.extensions.settings.RuntimeSettings
 
isAllowUserModification() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
 
isAlwaysExportCompartmentOutputs() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings
 
isAnnotateWithChannelIndex() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsAlgorithm
Deprecated.
 
isAnnotateWithSlotName() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsAlgorithm
Deprecated.
 
isAnnotateWithValues() - Method in class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableIntoRowsAlgorithm
 
isAntialiased() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
isAppend() - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters
 
isAppend() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ApplyExpressionToColumnsAlgorithm
 
isAppend() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ConvertColumnsAlgorithm
 
isAppendDirectoryNameToTarget() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.CopyPath
 
isApplyDespeckle() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
isApplyDilation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologicalReconstruction2DAlgorithm
 
isApplyDilation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologicalReconstruction3DAlgorithm
 
isApplyFirstCLAHE() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
isApplyGaussian() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
isApplyInternalGradient() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
isApplyMerging() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
isApplyPerChannel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm
 
isApplyPerChannel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm
 
isApplyPerChannel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm
 
isApplyPerChannel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiCalculatorAlgorithm
 
isApplyPerFrame() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm
 
isApplyPerFrame() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm
 
isApplyPerFrame() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm
 
isApplyPerFrame() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiCalculatorAlgorithm
 
isApplyPerSlice() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm
 
isApplyPerSlice() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm
 
isApplyPerSlice() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConditionalInverterAlgorithm
 
isApplyPerSlice() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ImageToTableAlgorithm
 
isApplyPerSlice() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm
 
isApplyPerSlice() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiCalculatorAlgorithm
 
isApplyPerSlice() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm
 
isApplyPerSlice() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm
 
isApplyPerSlice() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.HistogramGenerator
 
isApplySecondCLAHE() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
isApplyTiling() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling2DSettings
 
isApplyTiling() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling3DSettings
 
isApplyToAllPlanes() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJSettings.ContrastEnhancerSettings
 
isApplyToAllPlanes() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.LUTInverterAlgorithm
 
isArray() - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
Returns true if the value is an array
isAskOnDeleteCompartment() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
isAskOnDeleteNode() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
isAskOnDeleteParameter() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
isAssembleTemplates() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
isAssignableTo(Class<?>, Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
More powerful variant of Class.isAssignableFrom that supports primitives.
isAttachOnlyNonDefaultParameterAnnotations() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings
 
isAttachOnlyNonDefaultParameterAnnotations() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
isAttachParameterAnnotations() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings
 
isAttachParameterAnnotations() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
isAugment() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationEnhancementSettings_Old
Deprecated.
 
isAutoCalibrateAfterPulling() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJSettings
 
isAutoClamp() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.SliceROIListAlgorithm
 
isAutoClamp() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm
Deprecated.
 
isAutoClamp() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2
 
isAutoLabelOutputWithFileName() - Method in class org.hkijena.jipipe.extensions.filesystem.FilesystemExtensionSettings
 
isAutoLayoutMovesOtherNodes() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
isAutoMuteBySelection() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
isAutoMuteEdges() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
isAutoMuteEdgesEnabled() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
isAutoRemoveOutdatedCachedData() - Method in class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
isAutoSaveLastDisplay() - Method in class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
isAutoSaveLastImporter() - Method in class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
isAutoScale() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
isAutoScale() - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
isAutoSwitch2D3DViewer() - Method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewerGeneralUISettings
 
isAvoidGPUMemory() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNode
 
isAvoidLabelOnImage() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelParameters
 
isAvoidScaling() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.ImageParameters
 
isAvoidUnnecessaryScaling() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
 
isBalanceClasses() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.WekaClassifierSettings
 
isBeta() - Method in class org.hkijena.jipipe.extensions.ij3d.IJ3DPlugin
 
isBeta() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsPlugin
 
isBeta() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.TrackMatePlugin
 
isBeta() - Method in class org.hkijena.jipipe.extensions.ilastik.IlastikPlugin
 
isBeta() - Method in class org.hkijena.jipipe.extensions.omero.OMEROPlugin
 
isBeta() - Method in class org.hkijena.jipipe.extensions.omnipose.OmniposePlugin
 
isBeta() - Method in class org.hkijena.jipipe.extensions.python.PythonPlugin
 
isBeta() - Method in class org.hkijena.jipipe.extensions.r.RPlugin
 
isBeta() - Method in class org.hkijena.jipipe.extensions.scene3d.Scene3DPlugin
 
isBeta() - Method in interface org.hkijena.jipipe.JIPipePlugin
Returns whether this extension is in beta testing.
isBinarize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.Voronoi2DAlgorithm
 
isBlackBackground() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
isBlackBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
isBlackBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.FindHoles2DAlgorithm
 
isBlackBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyFillHoles2DAlgorithm
 
isBlackToAlpha() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel
Deprecated.
 
isBookmarked() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
 
isBorderOpaque() - Method in class org.hkijena.jipipe.ui.components.renderers.DropShadowRenderer
 
isBuffered() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
isCanceled() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
isCancelled() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
isCancelled() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.BeforeAddParameterEvent
 
isCancelled() - Method in class org.hkijena.jipipe.extensions.forms.ui.FormsDialog
 
isCancelled() - Method in class org.hkijena.jipipe.ui.extensions.ActivateDependenciesConfirmationDialog
 
isCancelled() - Method in class org.hkijena.jipipe.ui.extensions.DeactivateDependentsConfirmationDialog
 
isCancelled() - Method in class org.hkijena.jipipe.utils.InstantFuture
 
isCancelled() - Method in class org.hkijena.jipipe.utils.OKCancelDialog
 
isCellEditable(int, int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
isCellEditable(int, int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
isCellEditable(int, int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableMetadata
 
isCellEditable(int, int) - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
 
isCellEditable(int, int) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
 
isCellEditable(int, int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
isCellEditable(int, int) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantTableModel
 
isCellEditable(int, int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableModel
 
isCellEditable(int, int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
isCellEditable(int, int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableModel
 
isCellEditable(int, int) - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerTableModel
 
isCellEditable(int, int) - Method in class org.hkijena.jipipe.ui.ijupdater.FileTableModel
 
isCenter() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawOvalRoiAlgorithm
 
isCenter() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm
 
isCenter() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
isCenter() - Method in class org.hkijena.jipipe.ui.components.ImageFrame
 
isCheckForUpdates() - Method in class org.hkijena.jipipe.extensions.python.adapter.PythonAdapterExtensionSettings
 
isCleanUpAfterwards() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
isCleanUpAfterwards() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
isCleanUpAfterwards() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
isCleanUpAfterwards() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
isCleanUpAfterwards() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
isCleanUpAfterwards() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
isCleanUpAfterwards() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm
 
isCleanUpAfterwards() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
isCleanUpAfterwards() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
isCleanUpAfterwards() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
isCleanUpAfterwards() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
isCleanUpAfterwards() - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingPythonScriptAlgorithm
 
isCleanUpAfterwards() - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingPythonScriptAlgorithm
 
isCleanUpAfterwards() - Method in class org.hkijena.jipipe.extensions.python.algorithms.PythonScriptAlgorithm
 
isCleanUpAfterwards() - Method in class org.hkijena.jipipe.extensions.r.algorithms.IteratingRScriptAlgorithm
 
isCleanUpAfterwards() - Method in class org.hkijena.jipipe.extensions.r.algorithms.MergingRScriptAlgorithm
 
isCleanUpAfterwards() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessIteratingAlgorithm
 
isCleanUpAfterwards() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessMergingAlgorithm
 
isClearBeforeWrite() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.SetROI3DMetadataFromTableAlgorithm
 
isClearBeforeWrite() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.SetImageMetadataFromTableAlgorithm
 
isClearBeforeWrite() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm
 
isClearBeforeWrite() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetROIMetadataFromTableAlgorithm
 
isClosed() - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore
Returns true if this object is closed and thus should not be used anymore
isCluster() - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationTweaksSettings
 
isCollapsed() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
isCollapsed() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameter
 
isCollapsed() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameter
 
isColorSelectedNodeEdges() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
isCommon(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData
Returns true if this data is commonly used (only for UI)
isCompactMode() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.DocumentTabComponent
 
isCompareAbsolute() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.Hessian2DAlgorithm
 
isCompareAbsolute() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
isComposite() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
isCompositeROI() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
isConcatenate() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
isConcatenate() - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
isConcatenateDownsampledLayers() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
isConcatenateDownsampledLayers() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeTrainingTweaksSettings
 
isConcatenateDownsampledLayers() - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeTrainingTweaksSettings
 
isConnectAcrossC() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
isConnectAcrossC() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
isConnectAcrossT() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
isConnectAcrossT() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
isConsumeOnOverlap() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
isConsumeOnOverlap() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
isContinueLoading() - Method in class org.hkijena.jipipe.ui.project.InvalidProjectDependenciesInfoDialog
 
isContinueOnFailure() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
isContinueOnFailure() - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
isContinueOnFailure() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.ContinueOnFailureSettings
 
isConvertible(Class<? extends JIPipeData>, Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Returns true if the input data type can be converted into the output data type.
isCopySlices() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm
 
isCopySlices() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm
 
isCoreExtension() - Method in class org.hkijena.jipipe.api.compartments.JIPipeCompartmentsPlugin
 
isCoreExtension() - Method in class org.hkijena.jipipe.api.grouping.GroupingPlugin
 
isCoreExtension() - Method in class org.hkijena.jipipe.api.looping.LoopingPlugin
 
isCoreExtension() - Method in class org.hkijena.jipipe.extensions.batchassistant.BatchAssistantPlugin
 
isCoreExtension() - Method in class org.hkijena.jipipe.extensions.core.CorePlugin
 
isCoreExtension() - Method in class org.hkijena.jipipe.extensions.dev.DevelopmentPlugin
 
isCoreExtension() - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionPlugin
 
isCoreExtension() - Method in class org.hkijena.jipipe.extensions.graphannotation.GraphAnnotationPlugin
 
isCoreExtension() - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionLoaderPlugin
 
isCoreExtension() - Method in class org.hkijena.jipipe.extensions.multiparameters.MultiParametersPlugin
 
isCoreExtension() - Method in class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplateBoxToolPlugin
 
isCoreExtension() - Method in class org.hkijena.jipipe.extensions.parameters.StandardParametersPlugin
 
isCoreExtension() - Method in class org.hkijena.jipipe.extensions.pipelinerender.PipelineRenderPlugin
 
isCoreExtension() - Method in class org.hkijena.jipipe.extensions.processes.ProcessesPlugin
 
isCoreExtension() - Method in class org.hkijena.jipipe.extensions.settings.StandardSettingsPlugin
 
isCoreExtension() - Method in class org.hkijena.jipipe.extensions.tools.ToolsPlugin
 
isCoreExtension() - Method in interface org.hkijena.jipipe.JIPipePlugin
Returns whether this extension is a core extension and thus cannot be disabled by users.
isCorrectCorners() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm
 
isCorrespondingAuthor() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
isCostesSignificanceTest() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
isCreateCheckerboard() - Method in class org.hkijena.jipipe.extensions.imp.nodes.ConvertImpImageToImagePlusAlgorithm
 
isCreateComposite() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.MergeChannelsAlgorithm
 
isCrop() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
isCrop() - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
isCropC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.CropToRoiAlgorithm
 
isCropC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm
 
isCropT() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode
 
isCropT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.CropToRoiAlgorithm
 
isCropT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm
 
isCropXY() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode
 
isCropXY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.CropToRoiAlgorithm
 
isCropXY() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm
 
isCropZ() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode
 
isCropZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.CropToRoiAlgorithm
 
isCropZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm
 
isCumulative() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator
 
isCumulative() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm
 
isCumulative() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
isCurrentlyDraggingConnection() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
isCurrentlyDraggingNode() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
isCurrentlyRunning() - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeImageJPluginManager
 
isDark() - Method in enum org.hkijena.jipipe.ui.theme.JIPipeUITheme
 
isDarkBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologySkeletonize2DAlgorithm
 
isDarkBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm
 
isDarkBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm
 
isDarkBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm
 
isDarkBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm
 
isDarkBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm
 
isDarkBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm
 
isDarkBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm
 
isDarkLine() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
isDeallocate() - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2PullAlgorithm
 
isDeduplicate() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
isDeleteMaskedLabels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByMaskAlgorithm
 
isDeprecated() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
isDeprecated() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByExampleDatabaseEntry
 
isDeprecated() - Method in class org.hkijena.jipipe.api.nodes.database.CreateNewNodeByInfoDatabaseEntry
 
isDeprecated() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingCompartmentDatabaseEntry
 
isDeprecated() - Method in class org.hkijena.jipipe.api.nodes.database.ExistingPipelineNodeDatabaseEntry
 
isDeprecated() - Method in interface org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseEntry
 
isDeprecated() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo
 
isDeprecated() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
isDeprecated() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
Returns true if this node is deprecated
isDetachedProgress() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
Returns true if the progress was detached from the root progress
isDetailedDataString() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithDataString
 
isDetailedDataString() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.ToDataStringAlgorithm
 
isDirectory(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage
 
isDirectory(String) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage
Returns true if the element with given name is a directory
isDirectory(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage
Returns true if the element with given name is a directory
isDirectory() - Method in class org.hkijena.jipipe.extensions.parameters.library.filesystem.FileChooserBookmark
 
IsDirectoryFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.filesystem
 
IsDirectoryFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.filesystem.IsDirectoryFunction
 
isDisableResample() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationTweaksSettings
 
isDisableResample() - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationTweaksSettings
 
isDiscardExistingAnnotations() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithAnnotationTable
 
isDismiss() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction
 
isDoCorrectPosition() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
isDoEstimateWidth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
isDoExtendLine() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
isDone() - Method in class org.hkijena.jipipe.utils.InstantFuture
 
isDoScaling() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm
 
isDrawArrowHeads() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
isDrawBorder() - Method in class org.hkijena.jipipe.ui.components.icons.OverlayColorIcon
 
isDrawEdges() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
isDrawFill() - Method in class org.hkijena.jipipe.ui.components.icons.OverlayColorIcon
 
isDrawFilledOutline() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm
 
isDrawFilledOutline() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm
 
isDrawHorizontal() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
isDrawHorizontal() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
isDrawImprovedEdges() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
isDrawLabel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
isDrawLabel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelParameters
 
isDrawLabels() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.DrawerLabelSettings
 
isDrawLabels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
isDrawLabelsOnHover() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
isDrawName() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer.LabelSettings
 
isDrawNodeShadows() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
isDrawOutline() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm
 
isDrawOutline() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm
 
isDrawOutline() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm
 
isDrawOutline() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm
 
isDrawOutsideEdges() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
isDrawOver() - Method in class org.hkijena.jipipe.extensions.ij3d.utils.Roi3DDrawer
 
isDrawOver() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm
 
isDrawOver() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
isDrawOver() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
isDrawOver() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
isDrawOverReference() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRGBAlgorithm
 
isDrawShadow() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeAnnotationGraphNodeUI
 
isDrawShadow() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
isDrawVertical() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
isDrawVertical() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
isDrawVertices() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
isDuplicate() - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters
 
isDuplicate() - Method in class org.hkijena.jipipe.api.compat.ImageJImportParameters
 
isDuplicateImage() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJSettings.ContrastEnhancerSettings
 
isDuplicateImage() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.LUTInverterAlgorithm
 
isDuplicateImage() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.RemoveLUTAlgorithm
 
isDuplicateImage() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorMapAlgorithm
 
isDuplicateImage() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm
 
isDuplicateImage() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromImageAlgorithm
 
isEdgesAreBackground() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ApplyDistanceTransform2DAlgorithm
 
isEditable() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.EdgeFeature
 
isEditable() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeature
 
isEditable() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeature
 
isEditable() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicEnumParameter
If this returns true, the user can freely edit the entry
isEditable() - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
isEmpty() - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache
 
isEmpty() - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache
 
isEmpty() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
isEmpty() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
isEmpty() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Returns true if no data is referenced
isEmpty() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
isEmpty() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox
 
isEmpty() - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
Returns true if the expression is empty
isEmpty() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
isEmpty() - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
isEmpty() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
 
isEnable3D() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
isEnable3D() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
isEnable3DSegmentation() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
isEnable3DSegmentation() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
isEnable3DSegmentation() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
isEnable3DSegmentation() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
isEnable3DSegmentation() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
isEnable3DSegmentation() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
isEnableBackups() - Method in class org.hkijena.jipipe.extensions.settings.BackupSettings
 
isEnabled() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
isEnabled() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
 
isEnabled() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
isEnabled() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings
 
isEnabled() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
isEnabled() - Method in class org.hkijena.jipipe.extensions.omero.parameters.AnnotationsToOMEROKeyValuePairExporter
 
isEnabled() - Method in class org.hkijena.jipipe.extensions.omero.parameters.OMEROKeyValuePairToAnnotationImporter
 
isEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameter
 
isEnabled() - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesBuilder
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
Returns true if the default custom expression variables are shown in the UI
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByExpression
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.FilterByAnnotation
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.FilterByAnnotationIfElse
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.OverwriteAnnotations
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SplitByAnnotation
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.ExplodeRoi3DListAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.FilterFilamentEdgesByProperties
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.FilterFilamentsByProperties
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.FilterFilamentVerticesByProperties
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ErodeEndVerticesAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SplitSpotsNode
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SpotFilterNode
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TrackFilterNode
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ReorderHyperstackSlicesExpressionAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyColorMathExpression2DExpression
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyMathExpression2DAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateFromMathExpression2D
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DExpression
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.ChangeImageMetadataFromExpressionsAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.split.ExplodeRoiAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ApplyExpressionToColumnsAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RemoveColumnAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.tables.nodes.filter.FilterTableRowsAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.tables.nodes.GenerateColumnAlgorithm
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm
Deprecated.
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2
 
isEnableDefaultCustomExpressionVariables() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByExpressionAlgorithm
 
isEnableFiltering() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
isEnableGPU() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeGPUSettings
 
isEnableGPU() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationModelSettings_Old
Deprecated.
 
isEnableNotifications() - Method in class org.hkijena.jipipe.extensions.settings.NotificationUISettings
 
isEnableParallelization() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
isEnableSearch() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings.SearchSettings
 
isEnableTabContextMenu() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
 
isEnableWatershed() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm
 
isEnforceEdgesWithinMask() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
isEnforceEdgesWithinMask() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
isEnforceOverlap() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings
 
isEnforceOverlap() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
isEnforceSameComponent() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
isEnforceSameComponent() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.SmoothFilamentsAlgorithm
 
isEnsureNoPathExists() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
isEqualHyperstackDimensions() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm
 
isEqualizeFrequencies() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm
 
isEqualWidthAndHeight() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm
 
isEstimateHighThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
isEstimateLowThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
isEstimateSigma() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
isExcludeEdgeROIs() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
isExcludeEdges() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
isExcludeEdges() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm
 
isExcludeEdges() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
isExcludeExistingEndpoints() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
isExcludeOnEdges() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationThresholdSettings
 
isExcludeOnEdges() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm
 
isExcludeOnEdges() - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationThresholdSettings
 
isExcludeSelected() - Method in class org.hkijena.jipipe.ui.quickrun.QuickRunSettings
 
isExcludeZero() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByThicknessAlgorithm
 
isExcludeZero() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm
 
isExcludeZero() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm
 
isExcludeZero() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm
 
isExpandCanvas() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm
 
isExportAsDisplayed() - Method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer2DUISettings
 
isExportAsROIFile() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportROIAlgorithm
Deprecated.
 
isExportAsROIFile() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportROIAlgorithm2
 
isExportFailedLoopInputs() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.ContinueOnFailureSettings
 
isExportFailedPartitionInputs() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.ContinueOnFailureSettings
 
isExportHeavyData() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings
 
isExportLightweightData() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings
 
isExportLoopIntermediateResults() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings
 
isExportLoopTerminating() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings
 
isExtendTarget() - Method in class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm
 
isExtractRois() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
isExtractRois() - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
isFast() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi2DToRoi3DConverterAlgorithm
 
isFastMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer
 
isFastMode() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
isFastMode() - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationTweaksSettings
 
isFile(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage
 
isFile(String) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage
Returns true if the element with given name is a file
isFile(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage
Returns true if the element with given name is a file
isFile(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage
 
IsFileFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.filesystem
 
IsFileFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.filesystem.IsFileFunction
 
isFilesystemCompatible(String) - Static method in class org.hkijena.jipipe.utils.StringUtils
Returns if the string does not contain invalid characters.
isFileSystemPathInitialized() - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeDataStorage
Returns true if the file system path is initialized.
isFileSystemPathInitialized() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage
 
isFileSystemPathInitialized() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage
 
isFileSystemPathInitialized() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage
 
isFileSystemPathInitialized() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPWriteDataStorage
 
isFillOutline() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm
 
isFillOutline() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm
 
isFillSpots() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer
 
isFilterListHideInvisible() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
isFilterListOnlySelected() - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
isFilterListOnlySelected() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
isFilterListOnlySelected() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
IsFiniteFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.math
 
IsFiniteFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.math.IsFiniteFunction
 
isFirstAuthor() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
isFlagSet(int) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
isFlip() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Reslicer
 
isFlipTemplateHorizontally() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
isFlipTemplateVertically() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
isFlipVertical() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ResliceAlgorithm
 
isFloatingPointOutput() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DAlgorithm
 
isFloatingPointOutput() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DMergingAlgorithm
 
isForce2D() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi2DToRoi3DConverterAlgorithm
 
isForce2D() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.SkeletonToFilaments2DAlgorithm
 
isForceFlowGraphSolver() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
isForceFlowGraphSolver() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
isForceFlowGraphSolver() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
isForceFlowGraphSolver() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings
 
isForceFlowGraphSolver() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
isForceMeshLengthUnit() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm
 
isForceMeshLengthUnit() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
isForceMeshLengthUnit() - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.MaskTo3DMeshAlgorithm
 
isForceNAIsAny() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
isForceNAIsAny() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
isForceName() - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter
 
isForceName() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter2
 
isForceNativeImport() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
 
isForceNativeImport() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ImagePlusFromFile
 
isForcePassThroughLoopIterationInCaching() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
isForceReflection() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
 
isForceRGB() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
isFromExtension() - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
isFullPath() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.SimplePathAnnotationGenerator
 
isFunctional() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
isGenerateCachePreviews() - Method in class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
isGenerateConnectedComponents() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
isGenerateConnectedComponents() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeTrainingTweaksSettings
 
isGenerateConnectedComponents() - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeTrainingTweaksSettings
 
isGenerateOnePerBatch() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
 
isGenerateOnePerBatch() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingZeroImage
 
isGenerateResultPreviews() - Method in class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
isGeneratingTableColumn(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.extensions.tables.datatypes.TableColumn
Returns true if the parameter is a generating table column.
isGetDams() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm
 
isGrayscale() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
Returns true if the image is grayscale
isGreyscale(Color) - Static method in class org.hkijena.jipipe.utils.ColorUtils
 
isGreyscaleCorrection() - Method in class org.hkijena.jipipe.extensions.imp.nodes.ImportImpImageAlgorithm
 
isHasNotifications() - Method in class org.hkijena.jipipe.ui.notifications.WorkbenchNotificationInboxUI
 
isHasParameterSlot() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings
 
isHasVerticalGlue() - Method in class org.hkijena.jipipe.ui.components.FormPanel
 
isHeavy(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData
Returns true if this data is considered as having a large size
isHeavy() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
 
isHidden(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.api.data.JIPipeData
Returns true if this data should be be accessible by the user
isHidden() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
 
isHidden() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
isHidden() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess
 
isHidden() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo
 
isHidden() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
isHidden() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
Returns true if this algorithm should not appear in the list of available algorithms.
isHidden() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
 
isHidden() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess
 
isHidden() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
isHidden() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Returns if the parameter should be hidden from the user
isHidden() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
isHidden() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
isHidden(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Returns true if the data type with given ID is hidden
isHidden() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
isHidden() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo
 
isHidden() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo
 
isHidden() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
isHidden() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterItemParameterAccess
 
isHidden() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterInputAccess
 
isHidden() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterOutputAccess
 
isHidden() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterParameterAccess
 
isHidden() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
 
isHidden() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterKeyAccess
 
isHidden() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterValueAccess
 
isHidden() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableCellAccess
 
isHidden() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2AlgorithmInfo
 
isHidden() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIDownContextAction
 
isHidden() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUILeftContextAction
 
isHidden() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIRightContextAction
 
isHidden() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIUpContextAction
 
isHidden() - Method in interface org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeUIContextAction
Determines if the item is never shown (even if it applies) Keyboard shortcuts still work
isHidden() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
isHiddenLocalParameter(JIPipeParameterTree, JIPipeParameterAccess, String...) - Static method in class org.hkijena.jipipe.utils.ParameterUtils
Returns true if the provided parameter is local (i.e. only shown if its not a sub-parameter) and therefore should be hidden
isHiddenLocalParameterCollection(JIPipeParameterTree, JIPipeParameterCollection, String...) - Static method in class org.hkijena.jipipe.utils.ParameterUtils
Returns true if the collection is not a direct child of the tree root
isHideLabels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings
 
isHideLabels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings
 
isHideText() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
isHollowVertices() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
isHyperstack() - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
isIgnoreAnnotationColumnsOnTrivialMatch() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
isIgnoreC() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
isIgnoreC() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm
 
isIgnoreC() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
isIgnoreC() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
isIgnoreC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
isIgnoreC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
isIgnoreC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
isIgnoreC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
isIgnoreC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
isIgnoreC() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
isIgnoreCustomParameters() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
 
isIgnoreDeactivatedInputs() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
If true, the run will ignore cascading checks for deactivated inputs and run any node, that is not explicitly deactivated.
isIgnoreDeclaration() - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.PrettifyXMLAlgorithm
 
isIgnoreEmptyTables() - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm
 
isIgnoreErrors() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process.OutlineRoi3DAlgorithm
 
isIgnoreImportedDataAnnotations() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableArchive
 
isIgnoreImportedDataAnnotations() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableDirectory
 
isIgnoreImportedDataAnnotations() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.ImportJIPipeSlotFolderAlgorithm
 
isIgnoreImportedTextAnnotations() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableArchive
 
isIgnoreImportedTextAnnotations() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableDirectory
 
isIgnoreImportedTextAnnotations() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.ImportJIPipeSlotFolderAlgorithm
 
isIgnoreInputDataAnnotations() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableArchive
 
isIgnoreInputDataAnnotations() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableDirectory
 
isIgnoreInputDataAnnotations() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.ImportJIPipeSlotFolderAlgorithm
 
isIgnoreInputTextAnnotations() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableArchive
 
isIgnoreInputTextAnnotations() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableDirectory
 
isIgnoreInputTextAnnotations() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.ImportJIPipeSlotFolderAlgorithm
 
isIgnoreInvalidSlices() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
 
isIgnoreInvalidValues() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.AnnotationsToParametersAlgorithm
 
isIgnoreMissingAnnotations() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractDataAnnotation
 
isIgnoreMissingAnnotations() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm
 
isIgnoreMissingChannels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm
 
isIgnoreMissingChannels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsAlgorithm
Deprecated.
 
isIgnoreMissingChannels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
isIgnoreMissingColumns() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm
 
isIgnoreMissingImages() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
isIgnoreMissingOutputs() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
isIgnoreMissingRoiIndices() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.SetROI3DMetadataFromTableAlgorithm
 
isIgnoreMissingRoiIndices() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetROIMetadataFromTableAlgorithm
 
isIgnoreMissingSheets() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ResultsTableFromFile
 
isIgnoreMissingSlices() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm
 
isIgnoreNodeFunctionalEquals() - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache
 
isIgnoreNon2DEdges() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm
 
isIgnorePreActivationChecks() - Method in class org.hkijena.jipipe.extensions.settings.ExtensionSettings
 
isIgnoreReflectionParameters() - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
 
isIgnoreT() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
isIgnoreT() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm
 
isIgnoreT() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
isIgnoreT() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
isIgnoreT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
isIgnoreT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
isIgnoreT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
isIgnoreT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
isIgnoreT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
isIgnoreT() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
isIgnoreValidation() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.RunJIPipeProjectAlgorithm
 
isIgnoreZ() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
isIgnoreZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
isIgnoreZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
isIgnoreZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
isIgnoreZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
isIgnoreZ() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
isIgnoreZero() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm
 
isImageWasConvertedTo8Bit() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D.ImageLoaderRun
 
isImmutable() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.FormData
Return true if this form data is replaceable via the "Apply to ..." function
isImportant() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess
 
isImportant() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
 
isImportant() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess
 
isImportant() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
isImportant() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Returns true if the parameter should be marked in the UI as important
isImportant() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
isImportant() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterItemParameterAccess
 
isImportant() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterInputAccess
 
isImportant() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterOutputAccess
 
isImportant() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterParameterAccess
 
isImportant() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
 
isImportant() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterKeyAccess
 
isImportant() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterValueAccess
 
isImportant() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableCellAccess
 
isImproved() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.SymmetryFilter3DAlgorithm
 
isIncludeAnnotations() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm
 
isIncludeAnnotations() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm
 
isIncludeAnnotations() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm
 
isIncludeAnnotations() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm
 
isIncludeAnnotations() - Method in class org.hkijena.jipipe.extensions.tables.nodes.filter.FilterTablesAlgorithm
 
isIncludeHoles() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
isIncomplete() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Returns true if there is at least one slot that has no rows attached to it
isIndexMeshes() - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.ExportScene3DToColladaAlgorithm
Deprecated.
 
isIndexMeshes() - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.ExportScene3DToColladaAlgorithm2
 
isIndexMeshes() - Method in class org.hkijena.jipipe.extensions.scene3d.utils.Scene3DToColladaExporter
 
IsInfiniteFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.math
 
IsInfiniteFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.math.IsInfiniteFunction
 
isInitialized() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
 
isInitializing() - Method in class org.hkijena.jipipe.JIPipe
 
isInput() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
 
isInput() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
isInput() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
isInputIsEDM() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm
 
isInputMasks() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
isInputSlotsSealed() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
isInputSlotsSealed() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
isInserterCommitted() - Method in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderInserterUI
 
isInstallNumpy() - Method in class org.hkijena.jipipe.extensions.python.installers.MinicondaEnvPythonInstaller.Configuration
 
isInstallNumpy() - Method in class org.hkijena.jipipe.extensions.python.installers.PortableEnvPythonInstaller.Configuration
 
isInstallPandas() - Method in class org.hkijena.jipipe.extensions.python.installers.MinicondaEnvPythonInstaller.Configuration
 
isInstallPandas() - Method in class org.hkijena.jipipe.extensions.python.installers.PortableEnvPythonInstaller.Configuration
 
isInstallScikitImage() - Method in class org.hkijena.jipipe.extensions.python.installers.MinicondaEnvPythonInstaller.Configuration
 
isInstallScikitImage() - Method in class org.hkijena.jipipe.extensions.python.installers.PortableEnvPythonInstaller.Configuration
 
isInstallScikitLearn() - Method in class org.hkijena.jipipe.extensions.python.installers.MinicondaEnvPythonInstaller.Configuration
 
isInstallScikitLearn() - Method in class org.hkijena.jipipe.extensions.python.installers.PortableEnvPythonInstaller.Configuration
 
isInstallTiffFile() - Method in class org.hkijena.jipipe.extensions.python.installers.MinicondaEnvPythonInstaller.Configuration
 
isInstallTiffFile() - Method in class org.hkijena.jipipe.extensions.python.installers.PortableEnvPythonInstaller.Configuration
 
isInstantiated() - Static method in class org.hkijena.jipipe.JIPipe
 
isIntensityHistogram2D() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
isInterpolate() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationTweaksSettings
 
isInterpolate() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationEnhancementSettings_Old
Deprecated.
 
isInterpolate() - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationTweaksSettings
 
isInverse() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.binary.DistanceMap3DAlgorithm
 
isInverse() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.binary.ErodedVolumeFraction3DAlgorithm
 
isInvert() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeChannelSettings
 
isInvert() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
isInvert() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.BinarizeAlgorithm
 
isInvert() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.FrangiVesselnessFeatures
 
isInvert() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures
 
isInvert() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings
 
isInvert() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm
 
isInvert() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
isInvertThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.MaskToRoiAlgorithm
 
isInvertThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator
 
isInvertThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator
 
isInvertThreshold() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator
 
isInvertTransform() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.Warp2DAlgorithm
 
isIteratePerC() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
isIteratePerT() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
isIteratePerZ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
isKeepAnnotationColumns() - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.ConvertAnnotationTableToAnnotatedTables
 
isKeepCurrentAnnotation() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractDataAnnotation
 
isKeepDataAnnotations() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.DataAnnotationToStringAnnotation
 
isKeepOriginalAnnotations() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm
 
isKeepOriginalAnnotations() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm
 
isKeepOriginalAnnotations() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm
 
isKeepOriginalAnnotations() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm
 
isKeepOtherDataAnnotations() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractDataAnnotation
 
isKeepSameChannelCount() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm
 
isKeepValues() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByIdAlgorithm
 
isKendallTauRankCorrelation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
isKnownDependency(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
isLabelAll() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
isLabeling() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.HysteresisSegmentation3DAlgorithm
 
isLabels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
isLayoutAfterAlgorithmFinder() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
isLayoutAfterConnect() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
isLegacy() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItemCollection
 
isLegacy() - Static method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
isLiHistogramChannel1() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
isLiHistogramChannel2() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
isLiICQ() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
isLimitWithEllipsis() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelParameters
 
isLoaded() - Method in class org.hkijena.jipipe.JIPipeJavaExtensionInitializationInfo
 
isLoadFromCache() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
isLoadFromCache() - Method in class org.hkijena.jipipe.ui.quickrun.QuickRunSettings
 
isLocal() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
isLogarithmic() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.TrackRenderer
 
isLogarithmic() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl.TrackRenderer
 
isLogarithmic() - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI.TrackRenderer
 
isLogSilent() - Method in interface org.hkijena.jipipe.api.JIPipeRunnable
Determines if this run is being logged silently
isLogSilent() - Method in class org.hkijena.jipipe.extensions.python.adapter.JIPipePythonAdapterUpdateChecker
 
isLogToStdOut() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
isMakeFilesystemCompatible() - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter
 
isMandersCorrelation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
isMaximizeWindows() - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
isMeanVisible() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Returns the flag that controls whether or not the mean indicator is draw for each item.
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.Measurement3DSettings
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DStatisticsAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ColorRoi3DByStatisticsAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ExtractLabelStatisticsAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MeasurementDrawerPlugin2D.Settings
 
isMeasureInPhysicalUnits() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.Measurement2DSettings
 
isMedianVisible() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Returns the flag that controls whether or not the median indicator is draw for each item.
isMergeAnnotations() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.ExtractTableAlgorithm
 
isMergeInputAnnotations() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithData
 
isMergeLabelAnnotations() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithData
 
isMergeToLargerLabel() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm
 
isModern() - Method in enum org.hkijena.jipipe.ui.theme.JIPipeUITheme
 
isMouseIsEntered() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
isMultiple() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathFromUserDataSource
 
isMutableTableColumn(Class<? extends JIPipeData>) - Static method in interface org.hkijena.jipipe.extensions.tables.datatypes.TableColumn
Returns true if the parameter is a mutable table column.
IsNaNFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.math
 
IsNaNFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.math.IsNaNFunction
 
isNeedsToExist() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileDataSource
 
isNeedsToExist() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderDataSource
 
isNeedsToExist() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathDataSource
 
isNetAverage() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationTweaksSettings
 
isNetAverage() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationEnhancementSettings_Old
Deprecated.
 
isNetAverage() - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationTweaksSettings
 
isNeverAskOnClosingTabs() - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
isNodeRunnable() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
isNoInterpolate() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Reslicer
 
isNoInterpolation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ResliceAlgorithm
 
isNoLUT() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEExporterSettings
 
isNormalize() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationTweaksSettings
 
isNormalize() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationEnhancementSettings_Old
Deprecated.
 
isNormalize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve.ConvolveByImage2DAlgorithm
 
isNormalize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve.ConvolveByParameter2DAlgorithm
 
isNormalize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap2DAlgorithm
 
isNormalize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap3DAlgorithm
 
isNormalize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.GeodesicDistanceMap2DAlgorithm
 
isNormalize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.LabelChamferDistanceMap3DAlgorithm
 
isNormalize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.HistogramGenerator
 
isNormalize() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator
 
isNormalize() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm
 
isNormalize() - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
isNormalizeContrast() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm
 
isNotifyInvalidDragAndDrop() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
isNoWindows() - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters
 
IsNullFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
IsNullFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.IsNullFunction
 
isNullOrEmpty(Object) - Static method in class org.hkijena.jipipe.utils.StringUtils
Returns true if the string is null or empty
isNumeric() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.DoubleArrayTableColumn
 
isNumeric() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.FloatArrayTableColumn
 
isNumeric() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RelabeledTableColumn
 
isNumeric() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RowIndexTableColumn
 
isNumeric() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.StringArrayTableColumn
 
isNumeric() - Method in interface org.hkijena.jipipe.extensions.tables.datatypes.TableColumn
Returns true if this column contains double entries.
isNumeric() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ZeroTableColumn
 
isNumeric() - Method in class org.hkijena.jipipe.extensions.tables.TableColumnReference
 
isNumericColumn(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Returns true if a column is numeric
isNumericColumn(String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
IsolateNodesUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
IsolateNodesUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.IsolateNodesUIContextAction
 
isOneBasedPositions() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm
 
isOneBasedPositions() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
isOnlyActiveImage() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ImagePlusFromGUI
 
isOnlyFirst() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
isOnlyIfPossible() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnToNumericAlgorithm
 
isOnlyPinned() - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
isOnlyPredecessors() - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.actions.UpdateCacheAction
 
isOnlySameComponent() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.RemoveDuplicateVerticesAlgorithm
 
isOpaqueTextures() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.MultiOrthoSlicerSettings
 
isOpenAllSeries() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
isOpenDataWindowsAlwaysOnTop() - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
isOpenUtilityWindowsAlwaysOnTop() - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
isOptional() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
isOutput() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
 
isOutput() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
isOutput() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
isOutput32bit() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm
 
isOutputBlockwiseObjectPredictions() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters
 
isOutputBlockwiseObjectPredictions() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters
 
isOutputBlockwiseObjectPredictions() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters
 
isOutputBlockwiseObjectProbabilities() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters
 
isOutputBlockwiseObjectProbabilities() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters
 
isOutputBlockwiseObjectProbabilities() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters
 
isOutputBranchTable() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters
 
isOutputEmptyLists() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm
 
isOutputEmptyLists() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm
 
isOutputEmptyLists() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm
 
isOutputEmptyLists() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm
 
isOutputEmptyLists() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm
 
isOutputFeatures() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters
 
isOutputFeatures() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters
 
isOutputFeatures() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters
 
isOutputFeatures() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters
 
isOutputFeaturesStage1() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
isOutputFeaturesStage2() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
isOutputFiles() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.FilterPaths
 
isOutputFlows() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationOutputSettings_Old
Deprecated.
 
isOutputFlowsD() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationOutputSettings
 
isOutputFlowsXY() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationOutputSettings
 
isOutputFlowsZ() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationOutputSettings
 
isOutputFolders() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.FilterPaths
 
isOutputInputStage1() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
isOutputInputStage2() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
isOutputLabels() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationOutputSettings
 
isOutputLabels() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationOutputSettings_Old
Deprecated.
 
isOutputLabels() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters
 
isOutputLabelsStage1() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
isOutputLabelsStage2() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
isOutputLargestShortestPaths() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters
 
isOutputMatchedTemplates() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
isOutputNonExisting() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.FilterPaths
 
isOutputObjectPredictions() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters
 
isOutputObjectPredictions() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters
 
isOutputObjectPredictions() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters
 
isOutputObjectProbabilities() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters
 
isOutputObjectProbabilities() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters
 
isOutputObjectProbabilities() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters
 
isOutputOutputFolder() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessIteratingAlgorithm
 
isOutputOutputFolder() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessMergingAlgorithm
 
isOutputOverlaps() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
isOutputOverlaps() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings
 
isOutputOverlaps() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
isOutputPixelProbabilities() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters
 
isOutputPixelProbabilities() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters
 
isOutputPixelProbabilities() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters
 
isOutputPolarCoordinates() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm
 
isOutputPolarCoordinates() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm
 
isOutputPolarCoordinates() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm
 
isOutputProbabilities() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationOutputSettings
 
isOutputProbabilities() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationOutputSettings_Old
Deprecated.
 
isOutputProbabilities() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters
 
isOutputProbabilitiesAllStages() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
isOutputProbabilitiesStage1() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
isOutputProbabilitiesStage2() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
isOutputProbabilityMaps() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaClassification2DAlgorithm
 
isOutputProbabilityMaps() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaClassification3DAlgorithm
 
isOutputROI() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationOutputSettings
 
isOutputROI() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationOutputSettings_Old
Deprecated.
 
isOutputRoi() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm
 
isOutputSimpleSegmentation() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters
 
isOutputSimpleSegmentationStage1() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
isOutputSimpleSegmentationStage2() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
isOutputSkeletonLabels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters
 
isOutputSkeletonTable() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters
 
isOutputSlotsSealed() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
isOutputSlotsSealed() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
isOutputStyles() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationOutputSettings_Old
Deprecated.
 
isOutputTaggedSkeletons() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters
 
isOutputUncertainty() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters
 
isOutputUncertaintyStage1() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
isOutputUncertaintyStage2() - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
isOutputWarnings() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
isPadded() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEExporterSettings
 
isPaintNodeShadow() - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode
 
isPaintNodeShadow() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode
 
isPaintNodeShadow() - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ArrowAnnotationGraphNode
 
isParameterAnnotationsUseInternalNames() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings
 
isParameterAnnotationsUseInternalNames() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.grouping.JsonAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection
Allows to override the visibility of parameters inside the UI
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection
Allows to override the visibility of sub-parameters inside the UI
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SimplifyAnnotationsAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationModelSettings_Old
Deprecated.
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.extensions.forms.algorithms.IteratingFormProcessorAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.extensions.forms.algorithms.MergingFormProcessorAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.extensions.forms.algorithms.SimpleIteratingFormProcessorAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImage2Algorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
isParameterUIVisible(JIPipeParameterTree, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
isPassThrough() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
 
isPhysicalSizes() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm
 
isPhysicalSizes() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
isPhysicalSizes() - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.MaskTo3DMeshAlgorithm
 
isPinned() - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
isPinned() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Returns true if the parameter is pinned to the top
isPinned() - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
isPixelsUnit(String) - Static method in class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 
isPlaneVisible() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.OrthoSliderPanel
 
isPolarCoordinates() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.Warp2DAlgorithm
 
isPostprocessor() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
Indicates if the node should be run after all other nodes.
isPreciseColocalization() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
isPreciseColocalization() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm
 
isPreciseColocalization() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
isPreciseColocalization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm
 
isPreferAssociatedImage() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm
 
isPreferAssociatedImage() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
isPreferCustomDownloader() - Method in class org.hkijena.jipipe.extensions.settings.DownloadSettings
 
isPreferIsotropicFilter() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersAlgorithm
 
isPreferRenderViaOverlay() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
isPreferRenderViaOverlay() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
isPreprocessor() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
Indicates if the node should be run before all other nodes.
isPresent() - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore
 
isPresent() - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter.LambdaSubscriber
 
isPresent() - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter.StrongObjectSubscriber
 
isPresent() - Method in interface org.hkijena.jipipe.api.events.JIPipeEventEmitter.Subscriber
 
isPresent() - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter.WeakObjectSubscriber
 
isPresent() - Method in class org.hkijena.jipipe.utils.data.OwningStore
 
isPresent() - Method in interface org.hkijena.jipipe.utils.data.Store
Returns true if the stored data is present
isPresent() - Method in class org.hkijena.jipipe.utils.data.WeakStore
 
isPreSmoothing() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm
 
isPreventAddingDeletingNodes() - Method in class org.hkijena.jipipe.api.JIPipeProjectPermissions
 
isPreventModifyingSlots() - Method in class org.hkijena.jipipe.api.JIPipeProjectPermissions
 
isPreventUpdateSlots() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
isPrimitiveWrapperOf(Class<?>, Class<?>) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
Returns true if the class is a primitive wrapper
isProcessing3D() - Method in class org.hkijena.jipipe.extensions.ijweka.datatypes.WekaModelData.Metadata
 
isProcessing3D() - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.ImportWekaModelFromFileAlgorithm
 
isProjectAllHyperstackTimePoints() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm
 
isProjectModified() - Method in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmWindow
 
isProjectModified() - Method in class org.hkijena.jipipe.ui.ijupdater.MissingRegistrationUpdateSiteResolver
 
isProjectModified() - Method in class org.hkijena.jipipe.ui.JIPipeDummyWorkbench
 
isProjectModified() - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWorkbench
 
isProjectModified() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
isProjectModified() - Method in interface org.hkijena.jipipe.ui.JIPipeWorkbench
Returns if the project is modified
isProvidedByEnvironment() - Method in class org.hkijena.jipipe.extensions.python.PythonPackageLibraryEnvironment
 
isQuadrantSwapNeeded() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo
 
isRead() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogEntry
 
isRecalibrate() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.DivideByMaximumAlgorithm
 
isRecursive() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ListFiles
 
isRecursive() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ListSubfolders
 
isRecursiveFollowsLinks() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ListFiles
 
isRecursiveFollowsLinks() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ListSubfolders
 
isRegistered(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
 
isReinterpret() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color.ColorSpaceConverterAlgorithm
 
isRelativeDistances() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm
 
isRelativeDistances() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm
 
isRelativeDistances() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm
 
isRelativeToProjectDir() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter
 
isRelativeToProjectDir() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataTableByParameter
 
isRelativeToProjectDir() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.ExportROI3DAlgorithm
Deprecated.
 
isRelativeToProjectDir() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
isRelativeToProjectDir() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportROIAlgorithm
Deprecated.
 
isRelativeToProjectDir() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm
Deprecated.
 
isRelativeToProjectDir() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm
Deprecated.
 
isRelativeToProjectDir() - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.ExportScene3DToColladaAlgorithm
Deprecated.
 
isRelativizePaths() - Method in class org.hkijena.jipipe.extensions.filesystem.FilesystemExtensionSettings
 
isRememberSettings() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToFilesByMetadataExporterRun.Settings
 
isRemoveColumn() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveArrayAnnotationsAlgorithm
 
isRemoveDuplicates() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
isRemoveExtensions() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.SimplePathAnnotationGenerator
 
isRemoveInX() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm
 
isRemoveInX() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.RemoveBorderFilaments
 
isRemoveInY() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm
 
isRemoveInY() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.RemoveBorderFilaments
 
isRemoveInZ() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm
 
isRemoveInZ() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.RemoveBorderFilaments
 
isRemoveLut() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
 
isRemoveLut() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ImagePlusFromFile
 
isRemoveNegativeValues() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm
 
isRemoveOutputAnnotations() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ConvertToAnnotationTable
 
isRemoveOverlay() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ImagePlusFromFile
 
isRenderCursor() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
isRenderedOrRendering() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCachedDataPreview
 
isRenderGreyscaleImages() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.BlendImagesAlgorithm
 
isRenderLabel() - Method in class org.hkijena.jipipe.extensions.pipelinerender.RenderPipelineRunSettings
 
isRenderOutsideEdges() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
isRenderROIAsOverlay() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.settings.ImageViewerUIROI2DDisplaySettings
 
isRenderROIAsVolume() - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ImageViewerUIROI3DDisplaySettings
 
isRenderShadow() - Method in class org.hkijena.jipipe.extensions.pipelinerender.RenderPipelineRunSettings
 
isReplaceIfExists() - Method in class org.hkijena.jipipe.extensions.tables.nodes.GenerateColumnAlgorithm
 
isRequireColocalization() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
isRequireColocalization() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm
 
isRequireColocalization() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
isRequireColocalization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm
 
isRequireDirection() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
isResample() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationPerformanceSettings_Old
Deprecated.
 
isResizeLeftSidebar() - Method in class org.hkijena.jipipe.utils.AutoResizeSplitPane.DynamicSidebarRatio
 
isRestarting() - Static method in class org.hkijena.jipipe.JIPipe
Returns true if a JIPipe restart is in progress.
isRestoreAnnotations() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.IteratingFormProcessorAlgorithm
 
isRestoreTabs() - Method in class org.hkijena.jipipe.api.JIPipeProjectMetadata
 
isRestoreTabs() - Method in class org.hkijena.jipipe.extensions.settings.ProjectsSettings
 
isRestrictToROI() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
isReverseSortOrder() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm
 
isReverseSortOrder() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.SortTableColumnsAlgorithm
 
isReverseSortOrder() - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.SortTableRowsAlgorithm
 
isRgbUseRender() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
isRotate() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ResliceAlgorithm
 
isRotate() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Reslicer
 
isRunnable() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory
 
isRunnable() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
isRunnable() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
Indicates that the node should carry a workload.
isRunnable() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory
Returns true if nodes of this category can be run in a single run
isRunningOrEnqueued(JIPipeRunnable) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
Determines if a runnable is enqueued or running
isSaveRGBWithImageJ() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesSettings
 
isSaveROI() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEExporterSettings
 
isSaveToDisk() - Method in class org.hkijena.jipipe.ui.quickrun.QuickRunSettings
 
isScheduledForActivation() - Method in interface org.hkijena.jipipe.JIPipePlugin
Returns true if the extension is scheduled to be activated upon the next restart
isScheduledForActivation() - Method in class org.hkijena.jipipe.ui.extensions.UpdateSitePlugin
 
isScheduledForDeactivation() - Method in interface org.hkijena.jipipe.JIPipePlugin
Returns true if the extension is scheduled to be deactivated upon the next restart
isScheduledForDeactivation() - Method in class org.hkijena.jipipe.ui.extensions.UpdateSitePlugin
 
isScrollable() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
 
isSearchFindExistingNodes() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings.AlgorithmFinderSettings
 
isSearchFindExistingNodes() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings.SearchSettings
 
isSearchFindNewNodes() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings.AlgorithmFinderSettings
 
isSearchFindNewNodes() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings.SearchSettings
 
isSelected() - Method in class org.hkijena.jipipe.ui.components.ribbon.CheckBoxAction
 
isSelected() - Method in class org.hkijena.jipipe.ui.components.ribbon.LargeToggleButtonAction
 
isSelected() - Method in class org.hkijena.jipipe.ui.components.ribbon.SmallToggleButtonAction
 
isSeparateChannels() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm
 
isSeparateNuclei() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.NucleiSegmentation3DAlgorithm
 
isShowBottomShadow() - Method in class org.hkijena.jipipe.ui.components.renderers.DropShadowRenderer
 
isShowFilaments() - Method in class org.hkijena.jipipe.extensions.ijfilaments.settings.ImageViewerUIFilamentDisplaySettings
 
isShowHorizontal() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
isShowIntroduction() - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
isShowLeftShadow() - Method in class org.hkijena.jipipe.ui.components.renderers.DropShadowRenderer
 
isShowLimitedParameters() - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
 
isShowLimitedParameters() - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
isShowName() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.GroupHeaderFormData
 
isShowName() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.ParameterFormData
 
isShowNotificationsAfterFirstStart() - Method in class org.hkijena.jipipe.extensions.settings.NotificationUISettings
 
isShowParameterSearchBar() - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
isShowProjectInfo() - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
isShowRightShadow() - Method in class org.hkijena.jipipe.ui.components.renderers.DropShadowRenderer
 
isShowROI() - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ImageViewerUIROI3DDisplaySettings
 
isShowROI() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.settings.ImageViewerUIROI2DDisplaySettings
 
isShowRunNotifications() - Method in class org.hkijena.jipipe.extensions.settings.NotificationUISettings
 
isShowRunOnlyIfInactive() - Method in class org.hkijena.jipipe.extensions.settings.NotificationUISettings
 
isShowSideBar() - Method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer2DUISettings
 
isShowSideBar() - Method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer3DUISettings
 
isShowSideBar() - Method in class org.hkijena.jipipe.extensions.settings.TableViewerUISettings
 
isShowSpots() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.settings.ImageViewerUISpotsDisplaySettings
 
isShowToolInfo() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
isShowTopShadow() - Method in class org.hkijena.jipipe.ui.components.renderers.DropShadowRenderer
 
isShowTracks() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.settings.ImageViewerUITracksDisplaySettings
 
isShowVertical() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
isShuffleLut() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToRGBAlgorithm
 
isSideBarVisible() - Method in class org.hkijena.jipipe.ui.components.FlexContentPanel
 
isSilent() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
If true, exceptions are discarded
isSilent() - Method in class org.hkijena.jipipe.extensions.settings.ExtensionSettings
 
isSilent() - Method in class org.hkijena.jipipe.ui.quickrun.QuickRunSettings
 
isSilent() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
 
isSilentlyOverride() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ReorderHyperstackSlicesExpressionAlgorithm
 
isSingle() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Returns true if each slot only has one row
isSkipCache() - Method in class org.hkijena.jipipe.api.data.JIPipeOutputDataSlot
 
isSkipCenter() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData
 
isSkipCenter() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData
 
isSkipCenter() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.RectangleImageJ2ShapeData
 
isSkipDataGathering() - Method in class org.hkijena.jipipe.api.data.JIPipeInputDataSlot
 
isSkipEmpty() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator.GeneratedColumn
 
isSkipEmptyTarget() - Method in class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm
 
isSkipExisting() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.CopyPath
 
isSkipExport() - Method in class org.hkijena.jipipe.api.data.JIPipeOutputDataSlot
 
isSkipGC() - Method in class org.hkijena.jipipe.api.data.JIPipeOutputDataSlot
 
isSkipIncompleteDataSets() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
isSkipIncompleteDataSets() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
isSkipInvalid() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.CopyPath
 
isSkipped() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
Used internally to mark an algorithm as (not) executed without triggering isFunctionallyEquals() Affects JIPipeGraph's getDeactivatedNodes This is not serialized, but copied
isSlotLabelIsCustom() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
isSlotsInputsEditable() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
isSlotsOutputsEditable() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
isSmooth() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm
 
isSmooth() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm
 
isSortedStackIds() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm
 
isSortFilesNumerically() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
 
isSourceHidden(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Gets source visibility
isSpearmanRankCorrelation() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
isSplit() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.DefineRectangularRoiAlgorithm
Deprecated.
 
isSplit() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.ReferencedDefineRectangularRoiAlgorithm
Deprecated.
 
isSplitAfterwards() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiCalculatorAlgorithm
 
isSplitAtJunctions() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
isSplitBySlotName() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportData
 
isSplitBySlotName() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter
 
isSplitBySlotName() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToFilesByMetadataExporterRun.Settings
 
isSplitC() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEExporterSettings
 
isSplitChannels() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
isSplitChannels() - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
isSplitFocalPlanes() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
isSplitFocalPlanes() - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
isSplitIntoConnectedComponents() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
isSplitSlices() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
isSplitT() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEExporterSettings
 
isSplitTimePoints() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
isSplitTimePoints() - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
isSplitZ() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEExporterSettings
 
isStartsAtMean() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
isStatusValid() - Method in class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
isStitchTiles() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
isStitchTiles() - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
isStoreIntermediateResults() - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.actions.RunAndShowResultsAction
 
isStoreIntermediateResults() - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.actions.UpdateCacheAction
 
isStoreIntermediateResults() - Method in class org.hkijena.jipipe.ui.quickrun.QuickRunSettings
 
isStoreToCache() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
isStoreToCache() - Method in class org.hkijena.jipipe.ui.quickrun.QuickRunSettings
 
isStoreToDisk() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
isStoreToDisk() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
isStrict() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm
 
isStringColumn() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo.OutputTableColumnInfo
 
isStringColumn(String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
isStringColumn(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
isSubtract() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm
 
isSuccess() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogEntry
 
isSupported() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
isSupportsLinux() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
isSupportsMacOS() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
isSupportsWindows() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
isSwapDimensions() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
isSwapDimensions() - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
isSwitchPanningDirection() - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
isThinLines() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm
 
isTile() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationPerformanceSettings_Old
Deprecated.
 
isTrainSizeModel() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
isTrainSizeModel() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
isTrainSizeModel() - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
isTriviallyConvertible(Class<? extends JIPipeData>, Class<? extends JIPipeData>) - Static method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Returns true if the input data type can be trivially converted into the output data type.
isTrySolveJunctions() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
isUIImportantLabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterEditorUI
 
isUIImportantLabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameterEditorUI
 
isUIImportantLabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionListEditorUI
 
isUIImportantLabelEnabled() - Method in class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
If true, the ParameterPanel will render an "important" label if the parameter is marked as important.
isUILabelEnabled() - Method in class org.hkijena.jipipe.api.environments.ExternalEnvironmentParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollectionParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContentsParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.expressions.ui.JIPipeExpressionParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.WekaClassifierParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OMEAccessorParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.nodetemplate.JIPipeNodeTemplateParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicEnumParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2DParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.auth.PasswordParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionListEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.colors.ColorParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.editors.JIPipeParameterCollectionVisibilitiesParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.filesystem.FileParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.filesystem.FilePathParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.images.ImageParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.JIPipeAuthorMetadataParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.JIPipeParameterCollectionParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.markup.HTMLTextParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtractionParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.NumberParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRangeParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.StringOrDoubleParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.StringParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.quantities.QuantityParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.IconRefParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExporterRefParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRefParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImporterRefParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRefParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRefParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeNodeInfoRefParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeParameterTypeInfoRefParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.AnchorParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMarginEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.InnerMarginEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.MarginParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.RectangleParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.scripts.LargeScriptParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.plots.parameters.UIPlotDataSeriesColumnEnumParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnGeneratorParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.extensions.tables.parameters.ResultsTableDataParameterEditorUI
 
isUILabelEnabled() - Method in class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
If true, the ParameterPanel will display a label with the parameter name next to this UI.
isUiLocked() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
 
isUniformStrokeColor() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer
 
isUniqueStackIds() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm
 
isUnsupported() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
isUpdateSitesApplied() - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager
 
isUpdateSitesReady() - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager
 
isUpdateWithHexCode() - Method in class org.hkijena.jipipe.ui.components.ColorChooserButton
 
isUseBioFormats() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesSettings
 
isUseCustomColorMap() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
isUseExpression() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRange
 
isUseNaturalSortOrder() - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.SortTableColumnsAlgorithm
 
isUseNaturalSortOrder() - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.SortTableRowsAlgorithm
 
isUseNeighbors() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature2DSettings
 
isUseNeighbors() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature3DSettings
 
isUseOverlay() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
isUserCanDisconnect() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphEdge
 
isUseResidualConnections() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
isUseResidualConnections() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeTrainingTweaksSettings
 
isUseResidualConnections() - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeTrainingTweaksSettings
 
isUserModifiable() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
Additional control variable to make a slot not removable/editable.
isUserRemovable() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.DoubleArrayTableColumn
 
isUserRemovable() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.FloatArrayTableColumn
 
isUserRemovable() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RelabeledTableColumn
 
isUserRemovable() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RowIndexTableColumn
 
isUserRemovable() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.StringArrayTableColumn
 
isUserRemovable() - Method in interface org.hkijena.jipipe.extensions.tables.datatypes.TableColumn
Returns if users can remove this source
isUserRemovable() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ZeroTableColumn
 
isUserRemovable() - Method in class org.hkijena.jipipe.extensions.tables.TableColumnReference
 
isUseScratchDirectory() - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.TemporaryFolderDataSource
 
isUseStackHistogram() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm
 
isUseStyleVector() - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
isUseStyleVector() - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeTrainingTweaksSettings
 
isUseStyleVector() - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeTrainingTweaksSettings
 
isUseThickness() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.RemoveBorderFilaments
 
isUseWekaNativeTiling() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling2DSettings
 
isUsingCustomCopy() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.FormData
Determines whether this form data uses a custom copy method for the "Apply to ..." function If false, duplicate() is used If true, customCopy(src) is used
isUsingCustomCopy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.MaskDrawerFormData
 
isUsingCustomCopy() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.ROIDrawerFormData
 
isUsingCustomReset() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.FormData
Determines whether this form data uses a custom reset method If false, a new copy of the original data is created If true, customReset() is called
isUsingCustomReset() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.MaskDrawerFormData
 
isUsingCustomReset() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.ROIDrawerFormData
 
isValid() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder
 
isValid() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReport
 
isValidateImageJDependencies() - Method in class org.hkijena.jipipe.extensions.settings.ExtensionSettings
 
isValidateJson() - Method in class org.hkijena.jipipe.extensions.strings.datasources.ImportJsonAlgorithm
 
isValidateNodeTypes() - Method in class org.hkijena.jipipe.extensions.settings.ExtensionSettings
 
isValidateOnSave() - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
isValidateXml() - Method in class org.hkijena.jipipe.extensions.strings.datasources.ImportXMLAlgorithm
 
isValidExtensionId(String) - Static method in class org.hkijena.jipipe.JIPipe
Returns if the ID is a valid extension ID Must have following structure: [group]:[artifact] [group] should be lower-case and be a valid Maven group ID [artifact] should be lower-case and a valid Maven artifact ID
isValidName(String) - Static method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
Returns true if the provided string is a valid slot name
isValidPosition(ImageProcessor, int, int) - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.SourceWrapMode
 
isValidVariableName(String) - Static method in class org.hkijena.jipipe.utils.scripting.MacroUtils
Returns true if the variable name is valid
isValuesAreJson() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column
 
isValuesAreJson() - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column
 
isVirtual() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
isVisible(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionVisibilities
Returns if the parameter is visible
isVisible() - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Action
 
isVisible() - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Band
 
isVisible() - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Task
 
isVisible() - Method in class org.hkijena.jipipe.utils.scripting.MacroFlag
 
isVisibleIn(UUID) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
 
isVisibleIn(Roi, ImageSliceIndex, boolean, boolean, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Returns true if the ROI is visible at given slice index
isVisibleInCompartmentGraph() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory
 
isVisibleInCompartmentGraph() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
isVisibleInCompartmentGraph() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
isVisibleInCompartmentGraph() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory
 
isVisibleInCompartmentGraph() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
isVisibleInCompartmentGraph() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory
 
isVisibleInCompartmentGraph() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory
 
isVisibleInCompartmentGraph() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory
 
isVisibleInCompartmentGraph() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory
 
isVisibleInCompartmentGraph() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
isVisibleInCompartmentGraph() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory
 
isVisibleInCompartmentGraph() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory
 
isVisibleInCompartmentGraph() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory
If the category should be available in the compartment graph editor
isVisibleInCompartmentGraph() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsNodeTypeCategory
 
isVisibleInGraph() - Method in class org.hkijena.jipipe.ui.extension.GraphEditorToolBarButtonExtension
Override this method to determine if this button should be available for a graph
isVisibleInGraphCompartment() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory
 
isVisibleInGraphCompartment() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
isVisibleInGraphCompartment() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
isVisibleInGraphCompartment() - Method in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory
 
isVisibleInGraphCompartment() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
isVisibleInGraphCompartment() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory
 
isVisibleInGraphCompartment() - Method in class org.hkijena.jipipe.api.nodes.categories.ImageJNodeTypeCategory
 
isVisibleInGraphCompartment() - Method in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory
 
isVisibleInGraphCompartment() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory
 
isVisibleInGraphCompartment() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
isVisibleInGraphCompartment() - Method in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory
 
isVisibleInGraphCompartment() - Method in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory
 
isVisibleInGraphCompartment() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory
If the category should be available in the graph compartment editor
isVisibleInGraphCompartment() - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsNodeTypeCategory
 
isWide() - Method in class org.hkijena.jipipe.ui.components.FormPanel.FormPanelEntry
 
isWithCompartmentAndAlgorithm() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
isWithDocumentation() - Method in class org.hkijena.jipipe.ui.components.FormPanel
 
isWithEdges() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
isWithEdges() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm
 
isWithEdges() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm
 
isWithEdges() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm
 
isWithEdges() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm
 
isWithGrid() - Method in class org.hkijena.jipipe.ui.components.ImageFrame
 
isWithLegend() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
isWithNonMaximaSuppression() - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
isWithParents() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.CreateDirectory
 
isWithRefresh() - Method in class org.hkijena.jipipe.ui.parameterreference.GraphNodeParameterReferenceGroupCollectionEditorUI
 
isWithSpinner() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
isWithVertices() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
isWithVertices() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm
 
isWithVertices() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm
 
isWithVertices() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm
 
isWithVertices() - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm
 
italic - Variable in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
itemDone(Object) - Method in class org.hkijena.jipipe.ui.ijupdater.IJProgressAdapter
 
itemDone(Object) - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeProgressAdapter
 
itemDone(Object) - Method in class org.hkijena.jipipe.ui.ijupdater.ProgressAdapter
 
IterableImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.data.input
Handling of Iterable, assumed to be ImgPlus It is assumed that these refer to images (conversion to ImageJ2DatasetData)
IterableImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.data.input.IterableImageJ2ModuleInput
 
IteratingFormProcessorAlgorithm - Class in org.hkijena.jipipe.extensions.forms.algorithms
 
IteratingFormProcessorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.IteratingFormProcessorAlgorithm
 
IteratingFormProcessorAlgorithm(IteratingFormProcessorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.IteratingFormProcessorAlgorithm
 
IteratingJythonScriptAlgorithm - Class in org.hkijena.jipipe.extensions.python.algorithms
An algorithm that allows to run Python code
IteratingJythonScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.python.algorithms.IteratingJythonScriptAlgorithm
Creates a new instance
IteratingJythonScriptAlgorithm(IteratingJythonScriptAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.python.algorithms.IteratingJythonScriptAlgorithm
Creates a copy
IteratingPythonScriptAlgorithm - Class in org.hkijena.jipipe.extensions.python.algorithms
An algorithm that allows to run Python code
IteratingPythonScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.python.algorithms.IteratingPythonScriptAlgorithm
Creates a new instance
IteratingPythonScriptAlgorithm(IteratingPythonScriptAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.python.algorithms.IteratingPythonScriptAlgorithm
Creates a copy
IteratingRScriptAlgorithm - Class in org.hkijena.jipipe.extensions.r.algorithms
 
IteratingRScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.r.algorithms.IteratingRScriptAlgorithm
 
IteratingRScriptAlgorithm(IteratingRScriptAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.r.algorithms.IteratingRScriptAlgorithm
 
IterationModeEnumInfo() - Constructor for class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm.IterationModeEnumInfo
 
IterationStepGenerationSettings() - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm.IterationStepGenerationSettings
 
IterationStepGenerationSettings(JIPipeParameterlessSimpleIteratingAlgorithm.IterationStepGenerationSettings) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm.IterationStepGenerationSettings
 
IterationStepSlicer - Class in org.hkijena.jipipe.extensions.utils.algorithms
 
IterationStepSlicer(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.IterationStepSlicer
 
IterationStepSlicer(IterationStepSlicer) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.IterationStepSlicer
 
IterativeThreshold3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.segmentation
 
IterativeThreshold3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
IterativeThreshold3DAlgorithm(IterativeThreshold3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
IterativeThreshold3DAlgorithm.CriteriaMethod - Enum in org.hkijena.jipipe.extensions.ij3d.nodes.segmentation
 
IterativeThreshold3DAlgorithm.SegmentResultsMethod - Enum in org.hkijena.jipipe.extensions.ij3d.nodes.segmentation
 
IterativeThreshold3DAlgorithm.ThresholdMethod - Enum in org.hkijena.jipipe.extensions.ij3d.nodes.segmentation
 
IterativeThresholdByROIStatistics2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative
 
IterativeThresholdByROIStatistics2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
IterativeThresholdByROIStatistics2DAlgorithm(IterativeThresholdByROIStatistics2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
IterativeThresholdByROIStatistics2DAlgorithm.FilteringParameters - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative
 
IterativeThresholdByROIStatistics2DAlgorithm.ScoreParameters - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative
 
IterativeThresholdByROIStatistics2DAlgorithm.ThresholdingResult - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative
 
iterator() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
iterator() - Method in class org.hkijena.jipipe.extensions.ilastik.utils.GridCoordinates
 
iterator() - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 

J

JavaExtensionValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts
 
JavaExtensionValidationReportContext(JIPipeDependency) - Constructor for class org.hkijena.jipipe.api.validation.contexts.JavaExtensionValidationReportContext
 
JavaExtensionValidationReportContext(JIPipeValidationReportContext, JIPipeDependency) - Constructor for class org.hkijena.jipipe.api.validation.contexts.JavaExtensionValidationReportContext
 
JavaScriptFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.scripts
 
JavaScriptFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.scripts.JavaScriptFunction
 
JIPipe - Class in org.hkijena.jipipe
A scijava service that discovers JIPipe plugins in the classpath
JIPipe() - Constructor for class org.hkijena.jipipe.JIPipe
 
JIPipeAdaptiveParametersAlgorithm - Interface in org.hkijena.jipipe.api.nodes
An algorithm that has support for adaptive parameters
JIPipeAdaptiveParameterSettings - Class in org.hkijena.jipipe.api.nodes
Settings class that allows users to generate expressions with adaptive parameters
JIPipeAdaptiveParameterSettings() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
JIPipeAdaptiveParameterSettings(JIPipeAdaptiveParameterSettings) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
JIPipeAdaptiveParameterSettings.VariablesInfo - Class in org.hkijena.jipipe.api.nodes
 
JIPipeAlgorithm - Class in org.hkijena.jipipe.api.nodes
An JIPipeGraphNode that contains a non-empty workload.
JIPipeAlgorithm(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
Initializes a new node type instance and sets a custom slot configuration
JIPipeAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
Initializes a new node type instance
JIPipeAlgorithm(JIPipeAlgorithm) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
Creates a copy
JIPipeAlgorithmCacheBrowserOutputSelectorUI - Class in org.hkijena.jipipe.ui.cache
 
JIPipeAlgorithmCacheBrowserOutputSelectorUI(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.ui.cache.JIPipeAlgorithmCacheBrowserOutputSelectorUI
 
JIPipeAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEvent - Class in org.hkijena.jipipe.ui.cache
 
JIPipeAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEventEmitter - Class in org.hkijena.jipipe.ui.cache
 
JIPipeAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEventListener - Interface in org.hkijena.jipipe.ui.cache
 
JIPipeAlgorithmCacheBrowserUI - Class in org.hkijena.jipipe.ui.cache
UI around an JIPipeGraphRun result
JIPipeAlgorithmCacheBrowserUI(JIPipeProjectWorkbench, JIPipeGraphNode, JIPipeGraphCanvasUI) - Constructor for class org.hkijena.jipipe.ui.cache.JIPipeAlgorithmCacheBrowserUI
 
JIPipeAlgorithmCompendiumUI - Class in org.hkijena.jipipe.ui.documentation
A browsable list of algorithms with full documentation
JIPipeAlgorithmCompendiumUI() - Constructor for class org.hkijena.jipipe.ui.documentation.JIPipeAlgorithmCompendiumUI
Creates a new instance
JIPipeAlgorithmListCellRenderer - Class in org.hkijena.jipipe.ui.components.renderers
JIPipeAlgorithmListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.components.renderers.JIPipeAlgorithmListCellRenderer
Creates a new renderer
JIPipeAnnotation - Interface in org.hkijena.jipipe.api.annotation
 
JIPipeAnnotationGraphNode - Class in org.hkijena.jipipe.api.nodes.annotation
A node that is an annotation Nodes of this type are rendered by JIPipeAnnotationGraphNodeUI instead of JIPipeGraphNodeUI and have a custom size information
JIPipeAnnotationGraphNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode
 
JIPipeAnnotationGraphNode(JIPipeAnnotationGraphNode) - Constructor for class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode
 
JIPipeAnnotationGraphNodeTool<T extends JIPipeAnnotationGraphNode> - Class in org.hkijena.jipipe.api.nodes.annotation
 
JIPipeAnnotationGraphNodeTool(Class<T>) - Constructor for class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
JIPipeAnnotationGraphNodeUI - Class in org.hkijena.jipipe.ui.grapheditor.general.nodeui
 
JIPipeAnnotationGraphNodeUI(JIPipeWorkbench, JIPipeGraphCanvasUI, JIPipeAnnotationGraphNode) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeAnnotationGraphNodeUI
Creates a new UI
JIPipeAnnotationTableCellRenderer - Class in org.hkijena.jipipe.ui.resultanalysis.renderers
JIPipeAnnotationTableCellRenderer() - Constructor for class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeAnnotationTableCellRenderer
Creates a new renderer
JIPipeApplicationSettingsUI - Class in org.hkijena.jipipe.ui.settings
JIPipeApplicationSettingsUI(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.ui.settings.JIPipeApplicationSettingsUI
Creates a new instance
JIPipeAsyncResultDataSlotPreview - Class in org.hkijena.jipipe.ui.resultanalysis
A JIPipeResultDataSlotPreview that uses a SwingWorker to load previews in a separate thread.
JIPipeAsyncResultDataSlotPreview(JIPipeProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableMetadataRow, JIPipeExportedDataAnnotation) - Constructor for class org.hkijena.jipipe.ui.resultanalysis.JIPipeAsyncResultDataSlotPreview
Creates a new renderer
JIPipeAuthorMetadata - Class in org.hkijena.jipipe.api
Models an author with affiliations
JIPipeAuthorMetadata() - Constructor for class org.hkijena.jipipe.api.JIPipeAuthorMetadata
Creates a new instance
JIPipeAuthorMetadata(String, String, String, StringList, String, String, boolean, boolean) - Constructor for class org.hkijena.jipipe.api.JIPipeAuthorMetadata
Initializes the instance
JIPipeAuthorMetadata(JIPipeAuthorMetadata) - Constructor for class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
JIPipeAuthorMetadata.List - Class in org.hkijena.jipipe.api
 
JIPipeAuthorMetadataParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.jipipe
 
JIPipeAuthorMetadataParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.JIPipeAuthorMetadataParameterEditorUI
Creates new instance
JIPipeCache - Interface in org.hkijena.jipipe.api.cache
A class that implements a data cache
JIPipeCache.ClearedEvent - Class in org.hkijena.jipipe.api.cache
 
JIPipeCache.ClearedEventEmitter - Class in org.hkijena.jipipe.api.cache
 
JIPipeCache.ClearedEventListener - Interface in org.hkijena.jipipe.api.cache
 
JIPipeCache.ModifiedEvent - Class in org.hkijena.jipipe.api.cache
 
JIPipeCache.ModifiedEventEmitter - Class in org.hkijena.jipipe.api.cache
 
JIPipeCache.ModifiedEventListener - Interface in org.hkijena.jipipe.api.cache
 
JIPipeCache.StoredEvent - Class in org.hkijena.jipipe.api.cache
 
JIPipeCache.StoredEventEmitter - Class in org.hkijena.jipipe.api.cache
 
JIPipeCache.StoredEventListener - Interface in org.hkijena.jipipe.api.cache
 
JIPipeCacheBrowserUI - Class in org.hkijena.jipipe.ui.cache
UI around an JIPipeGraphRun result
JIPipeCacheBrowserUI(JIPipeProjectWorkbench) - Constructor for class org.hkijena.jipipe.ui.cache.JIPipeCacheBrowserUI
 
JIPipeCacheClearAllRun - Class in org.hkijena.jipipe.api.cache
 
JIPipeCacheClearAllRun(JIPipeCache) - Constructor for class org.hkijena.jipipe.api.cache.JIPipeCacheClearAllRun
 
JIPipeCacheClearOutdatedRun - Class in org.hkijena.jipipe.api.cache
 
JIPipeCacheClearOutdatedRun(JIPipeCache) - Constructor for class org.hkijena.jipipe.api.cache.JIPipeCacheClearOutdatedRun
 
JIPipeCacheDataViewerWindow - Class in org.hkijena.jipipe.ui.cache
Base class for a Window that displays cached data.
JIPipeCacheDataViewerWindow(JIPipeWorkbench, JIPipeDataTableDataSource, String) - Constructor for class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
 
JIPipeCachedDataDisplayCacheControl - Class in org.hkijena.jipipe.ui.cache
Interface that allows users to control refresh to cache and update thew current item within directly within the viewed data
JIPipeCachedDataDisplayCacheControl(JIPipeProjectWorkbench, JToolBar, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.ui.cache.JIPipeCachedDataDisplayCacheControl
 
JIPipeCachedDataPreview - Class in org.hkijena.jipipe.ui.cache
A component that acts as table cell (or other component) that generates a preview of a cached JIPipeData Preview generation is put into its own thread.
JIPipeCachedDataPreview(Component, JIPipeDataItemStore, boolean) - Constructor for class org.hkijena.jipipe.ui.cache.JIPipeCachedDataPreview
Creates a new instance
JIPipeCachedDataPreview(Component, Store<JIPipeDataItemStore>, boolean) - Constructor for class org.hkijena.jipipe.ui.cache.JIPipeCachedDataPreview
Creates a new instance
JIPipeCachedDataSlotDataSource - Class in org.hkijena.jipipe.api.data.sources
 
JIPipeCachedDataSlotDataSource(JIPipeDataTable, int, UUID, String) - Constructor for class org.hkijena.jipipe.api.data.sources.JIPipeCachedDataSlotDataSource
 
JIPipeCachedDataSlotDataSource(JIPipeDataTable, int, String, UUID, String) - Constructor for class org.hkijena.jipipe.api.data.sources.JIPipeCachedDataSlotDataSource
 
JIPipeCachedDataViewerAnnotationInfoPanel - Class in org.hkijena.jipipe.ui.cache
 
JIPipeCachedDataViewerAnnotationInfoPanel(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.ui.cache.JIPipeCachedDataViewerAnnotationInfoPanel
 
JIPipeCachedDataViewerAnnotationInfoPanel.Renderer - Class in org.hkijena.jipipe.ui.cache
 
JIPipeCacheManagerUI - Class in org.hkijena.jipipe.ui.cache
UI that monitors the queue
JIPipeCacheManagerUI(JIPipeProjectWorkbench) - Constructor for class org.hkijena.jipipe.ui.cache.JIPipeCacheManagerUI
Creates new instance
JIPipeCacheStateTreeCellRenderer - Class in org.hkijena.jipipe.ui.cache.cachetree
Renders the tree in JIPipeResultAlgorithmTree
JIPipeCacheStateTreeCellRenderer() - Constructor for class org.hkijena.jipipe.ui.cache.cachetree.JIPipeCacheStateTreeCellRenderer
Creates new renderer
JIPipeCacheTreePanel - Class in org.hkijena.jipipe.ui.cache.cachetree
Displays a tree that contains all cached items of a state
JIPipeCacheTreePanel(JIPipeProjectWorkbench) - Constructor for class org.hkijena.jipipe.ui.cache.cachetree.JIPipeCacheTreePanel
 
JIPipeCLI - Class in org.hkijena.jipipe
 
JIPipeCLI() - Constructor for class org.hkijena.jipipe.JIPipeCLI
 
JIPipeColumMatching - Enum in org.hkijena.jipipe.api.nodes
Strategies that determine how to detect the columns that should be used for matching
JIPipeColumnMatchingEnumInfo - Class in org.hkijena.jipipe.api.nodes
 
JIPipeColumnMatchingEnumInfo() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeColumnMatchingEnumInfo
 
JIPipeCommentNode - Class in org.hkijena.jipipe.extensions.core.nodes
 
JIPipeCommentNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.core.nodes.JIPipeCommentNode
 
JIPipeCommentNode(JIPipeCommentNode) - Constructor for class org.hkijena.jipipe.extensions.core.nodes.JIPipeCommentNode
 
JIPipeCompartmentGraphDragAndDropBehavior - Class in org.hkijena.jipipe.ui.grapheditor.compartments.dragdrop
Installs Drag and Drop features that create filesystem nodes
JIPipeCompartmentGraphDragAndDropBehavior() - Constructor for class org.hkijena.jipipe.ui.grapheditor.compartments.dragdrop.JIPipeCompartmentGraphDragAndDropBehavior
 
JIPipeCompartmentOutput - Class in org.hkijena.jipipe.api.compartments.algorithms
A graph compartment output Transfers data 1:1 from input to output
JIPipeCompartmentOutput(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.compartments.algorithms.JIPipeCompartmentOutput
Creates a new instance.
JIPipeCompartmentOutput(JIPipeCompartmentOutput) - Constructor for class org.hkijena.jipipe.api.compartments.algorithms.JIPipeCompartmentOutput
Creates a copy of the other algorithm
JIPipeCompartmentOutputData - Class in org.hkijena.jipipe.api.compartments.datatypes
Represents an JIPipeCompartmentOutput in the compartment graph.
JIPipeCompartmentOutputData() - Constructor for class org.hkijena.jipipe.api.compartments.datatypes.JIPipeCompartmentOutputData
 
JIPipeCompartmentsGraphEditorUI - Class in org.hkijena.jipipe.ui.grapheditor.compartments
Graph editor UI for a project compartment graph
JIPipeCompartmentsGraphEditorUI(JIPipeProjectWorkbench) - Constructor for class org.hkijena.jipipe.ui.grapheditor.compartments.JIPipeCompartmentsGraphEditorUI
 
JIPipeCompartmentsPlugin - Class in org.hkijena.jipipe.api.compartments
Extension that provides compartment management functionality
JIPipeCompartmentsPlugin() - Constructor for class org.hkijena.jipipe.api.compartments.JIPipeCompartmentsPlugin
 
JIPipeCompendiumUI<T> - Class in org.hkijena.jipipe.ui.documentation
A browsable list of help pages
JIPipeCompendiumUI(MarkdownDocument) - Constructor for class org.hkijena.jipipe.ui.documentation.JIPipeCompendiumUI
Creates a new instance
JIPipeComponentCellRenderer - Class in org.hkijena.jipipe.ui.components.renderers
 
JIPipeComponentCellRenderer() - Constructor for class org.hkijena.jipipe.ui.components.renderers.JIPipeComponentCellRenderer
 
JIPipeConnectGraphEditorTool - Class in org.hkijena.jipipe.api.grapheditortool
 
JIPipeConnectGraphEditorTool() - Constructor for class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
JIPipeContextAction - Annotation Type in org.hkijena.jipipe.api.parameters
An additional action (usually UI action) that is attached to the ParameterPanel.
JIPipeCreateNodesFromDraggedDataDragAndDropBehavior - Class in org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.dragdrop
Installs Drag and Drop features that create filesystem nodes
JIPipeCreateNodesFromDraggedDataDragAndDropBehavior() - Constructor for class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.dragdrop.JIPipeCreateNodesFromDraggedDataDragAndDropBehavior
 
JIPipeCropViewGraphEditorTool - Class in org.hkijena.jipipe.api.grapheditortool
 
JIPipeCropViewGraphEditorTool() - Constructor for class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool
 
JIPipeCustomAnnotationMatchingExpressionVariables - Class in org.hkijena.jipipe.api.nodes
 
JIPipeCustomAnnotationMatchingExpressionVariables() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeCustomAnnotationMatchingExpressionVariables
 
JIPipeCustomExpressionVariablesParameter - Class in org.hkijena.jipipe.extensions.expressions.custom
A parameter collection that allows the creation of custom expression variables Please note that the JIPipeParameter annotation should have JIPipeParameterSerializationMode set to 'NestedCollection'.
JIPipeCustomExpressionVariablesParameter() - Constructor for class org.hkijena.jipipe.extensions.expressions.custom.JIPipeCustomExpressionVariablesParameter
 
JIPipeCustomExpressionVariablesParameter(AbstractJIPipeParameterCollection) - Constructor for class org.hkijena.jipipe.extensions.expressions.custom.JIPipeCustomExpressionVariablesParameter
 
JIPipeCustomExpressionVariablesParameter(JIPipeCustomExpressionVariablesParameter) - Constructor for class org.hkijena.jipipe.extensions.expressions.custom.JIPipeCustomExpressionVariablesParameter
 
JIPipeCustomExpressionVariablesParameter(JIPipeCustomExpressionVariablesParameter, AbstractJIPipeParameterCollection) - Constructor for class org.hkijena.jipipe.extensions.expressions.custom.JIPipeCustomExpressionVariablesParameter
 
JIPipeCustomExpressionVariablesParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.expressions.custom
 
JIPipeCustomExpressionVariablesParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.expressions.custom.JIPipeCustomExpressionVariablesParameterVariablesInfo
 
JIPipeCustomMenuRegistry - Class in org.hkijena.jipipe.ui.registries
Registry for menu extensions
JIPipeCustomMenuRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.ui.registries.JIPipeCustomMenuRegistry
 
JIPipeCustomParameterCollection - Interface in org.hkijena.jipipe.api.parameters
If a class inherits from this interface, reflection-based parameter discovery is replaced by the getCustomParameters() method result.
JIPipeCustomTextDescriptionParameter - Interface in org.hkijena.jipipe.api.parameters
Extend parameter types with this interface to render custom text descriptions instead of JSON serialized string
JIPipeData - Interface in org.hkijena.jipipe.api.data
Base class for any JIPipe data wrapper class There must be a static function importData(JIPipeReadDataStorage, JIPipeProgressInfo) that imports the data from a row storage folder.
JIPipeDataAnnotation - Class in org.hkijena.jipipe.api.annotation
 
JIPipeDataAnnotation(String, JIPipeDataItemStore) - Constructor for class org.hkijena.jipipe.api.annotation.JIPipeDataAnnotation
 
JIPipeDataAnnotation(String, JIPipeData) - Constructor for class org.hkijena.jipipe.api.annotation.JIPipeDataAnnotation
 
JIPipeDataAnnotationMergeMode - Enum in org.hkijena.jipipe.api.annotation
 
JIPipeDataBatchGenerationResult - Class in org.hkijena.jipipe.api
Result of a iteration step generation run
JIPipeDataBatchGenerationResult() - Constructor for class org.hkijena.jipipe.api.JIPipeDataBatchGenerationResult
 
JIPipeDataByMetadataExporter - Class in org.hkijena.jipipe.api.annotation
Class that exports data based on metadata
JIPipeDataByMetadataExporter() - Constructor for class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter
 
JIPipeDataByMetadataExporter(JIPipeDataByMetadataExporter) - Constructor for class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter
 
JIPipeDataByMetadataExporter.VariablesInfo - Class in org.hkijena.jipipe.api.annotation
 
JIPipeDataContext - Interface in org.hkijena.jipipe.api.data.context
Context annotation attached to data in a data table.
JIPipeDataConverter - Interface in org.hkijena.jipipe.api.data
Interface that converts between JIPipeData instances
JIPipeDataDisplayOperation - Interface in org.hkijena.jipipe.api.data
An operation that is executed on showing existing data located in memory/cache.
JIPipeDataDisplayWrapperImportOperation - Class in org.hkijena.jipipe.api.data
JIPipeDataDisplayWrapperImportOperation(JIPipeDataDisplayOperation) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation
 
JIPipeDataDisplayWrapperImportOperation.ImportDataRun - Class in org.hkijena.jipipe.api.data
 
JIPipeDataExporterRun - Class in org.hkijena.jipipe.ui.cache.exporters
 
JIPipeDataExporterRun(JIPipeData, Path, String) - Constructor for class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataExporterRun
 
JIPipeDataImportOperation - Interface in org.hkijena.jipipe.api.data
An operation that is executed on showing existing data located in memory/cache The operations must be registered and will appear if the developer does not override the default importer row UI.
JIPipeDataInfo - Class in org.hkijena.jipipe.api.data
Compound type that contains all metadata of an JIPipeData type
JIPipeDataInfo.Deserializer - Class in org.hkijena.jipipe.api.data
Deserializes a info from a data type ID.
JIPipeDataInfo.KeyDeserializer - Class in org.hkijena.jipipe.api.data
Deserializer for a Map key
JIPipeDataInfo.Serializer - Class in org.hkijena.jipipe.api.data
Serializes a info as data type ID
JIPipeDataInfoCellRenderer - Class in org.hkijena.jipipe.ui.cache
Renders JIPipeData
JIPipeDataInfoCellRenderer() - Constructor for class org.hkijena.jipipe.ui.cache.JIPipeDataInfoCellRenderer
Create new instance
JIPipeDataInfoListCellRenderer - Class in org.hkijena.jipipe.ui.components.renderers
JIPipeDataInfoListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.components.renderers.JIPipeDataInfoListCellRenderer
Creates a new renderer
JIPipeDataInfoRef - Class in org.hkijena.jipipe.extensions.parameters.library.references
Helper to allow easy serialization of JIPipeDataInfo references
JIPipeDataInfoRef(String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRef
Initializes from data ID
JIPipeDataInfoRef(JIPipeDataInfo) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRef
 
JIPipeDataInfoRef() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRef
New instance
JIPipeDataInfoRef(JIPipeDataInfoRef) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRef
Creates a copy
JIPipeDataInfoRef(Class<? extends JIPipeData>) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRef
 
JIPipeDataInfoRef.Deserializer - Class in org.hkijena.jipipe.extensions.parameters.library.references
Deserializes the reference from a string
JIPipeDataInfoRef.Serializer - Class in org.hkijena.jipipe.extensions.parameters.library.references
Serializes the reference as ID
JIPipeDataInfoRefListCellRenderer - Class in org.hkijena.jipipe.ui.components.renderers
JIPipeDataInfoRefListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.components.renderers.JIPipeDataInfoRefListCellRenderer
Creates a new renderer
JIPipeDataInfoRefParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.references
Parameter for JIPipeDataInfoRef
JIPipeDataInfoRefParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRefParameterEditorUI
 
JIPipeDataItemStore - Class in org.hkijena.jipipe.api.data
Manages data and users
JIPipeDataItemStore(JIPipeData) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataItemStore
Create virtual data from data
JIPipeDataOperation - Interface in org.hkijena.jipipe.api.data
A user-interface operation on data
JIPipeDataParameterSettings - Annotation Type in org.hkijena.jipipe.extensions.parameters.library.references
Settings for JIPipeData parameters
JIPipeDataSlot - Class in org.hkijena.jipipe.api.data
A data slot holds an JIPipeData instance.
JIPipeDataSlot(JIPipeDataSlotInfo, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlot
Creates a new slot
JIPipeDataSlot(JIPipeDataSlot, boolean, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlot
 
JIPipeDataSlotInfo - Class in org.hkijena.jipipe.api.data
Defines an JIPipeGraphNode data slot.
JIPipeDataSlotInfo() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
JIPipeDataSlotInfo(Class<? extends JIPipeData>, JIPipeSlotType, String, String, String, boolean) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
Deprecated.
inheritedSlot is deprecated and non-functional
JIPipeDataSlotInfo(Class<? extends JIPipeData>, JIPipeSlotType, String, String, String) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
Deprecated.
inheritedSlot is deprecated and non-functional
JIPipeDataSlotInfo(Class<? extends JIPipeData>, JIPipeSlotType, String, String, boolean) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
JIPipeDataSlotInfo(Class<? extends JIPipeData>, JIPipeSlotType, String, String) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
JIPipeDataSlotInfo(Class<? extends JIPipeData>, JIPipeSlotType) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
JIPipeDataSlotInfo(AddJIPipeInputSlot) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
JIPipeDataSlotInfo(AddJIPipeOutputSlot) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
JIPipeDataSlotInfo(JIPipeDataSlotInfo) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
Copies the definition
JIPipeDataSlotInfo.Deserializer - Class in org.hkijena.jipipe.api.data
Deserializes an JIPipeDataSlotInfo
JIPipeDataSlotInfo.Deserializer.Builder - Class in org.hkijena.jipipe.api.data
 
JIPipeDataSlotInfo.Serializer - Class in org.hkijena.jipipe.api.data
Serializes an JIPipeDataSlotInfo
JIPipeDataSlotListCellRenderer - Class in org.hkijena.jipipe.ui.grapheditor.general.properties
Renders a JIPipeDataSlot
JIPipeDataSlotListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.properties.JIPipeDataSlotListCellRenderer
 
JIPipeDataSlotRole - Enum in org.hkijena.jipipe.api.data
Assigns a role to the data table attached to the data slot.
JIPipeDataSlotTableColumnHeaderRenderer - Class in org.hkijena.jipipe.ui.resultanalysis.renderers
Renders additional String columns in a table
JIPipeDataSlotTableColumnHeaderRenderer(JIPipeDataTableMetadata) - Constructor for class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeDataSlotTableColumnHeaderRenderer
Creates a new instance
JIPipeDataSlotTreeCellRenderer - Class in org.hkijena.jipipe.ui.grapheditor.general.properties
Renders an JIPipeDataSlot in a JTree
JIPipeDataSlotTreeCellRenderer() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.properties.JIPipeDataSlotTreeCellRenderer
Creates a new renderer
JIPipeDataSource - Interface in org.hkijena.jipipe.api.data
An object that points to some source of JIPipeData
JIPipeDataStorage - Interface in org.hkijena.jipipe.api.data.storage
A storage for serialized JIPipeData
JIPipeDataStorageDocumentation - Annotation Type in org.hkijena.jipipe.api.data
Added to JIPipeData classes to explain how the data type stores its data.
JIPipeDataTable - Class in org.hkijena.jipipe.api.data
 
JIPipeDataTable() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataTable
 
JIPipeDataTable(Class<? extends JIPipeData>) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataTable
 
JIPipeDataTable(JIPipeDataTable, boolean, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataTable
 
JIPipeDataTableDataSource - Class in org.hkijena.jipipe.api.data.sources
JIPipeDataTableDataSource(JIPipeDataTable, int) - Constructor for class org.hkijena.jipipe.api.data.sources.JIPipeDataTableDataSource
 
JIPipeDataTableDataSource(JIPipeDataTable, int, String) - Constructor for class org.hkijena.jipipe.api.data.sources.JIPipeDataTableDataSource
 
JIPipeDataTableMetadata - Class in org.hkijena.jipipe.api.data.serialization
Contains all metadata exported from an JIPipeDataTable
JIPipeDataTableMetadata() - Constructor for class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
JIPipeDataTableMetadataRow - Class in org.hkijena.jipipe.api.data.serialization
A row in the table
JIPipeDataTableMetadataRow() - Constructor for class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadataRow
Creates new instance
JIPipeDataTableRowUI - Class in org.hkijena.jipipe.ui.cache
UI for a row
JIPipeDataTableRowUI(JIPipeWorkbench, Store<JIPipeDataTable>, int) - Constructor for class org.hkijena.jipipe.ui.cache.JIPipeDataTableRowUI
Creates a new instance
JIPipeDataTableToFilesByMetadataExporterRun - Class in org.hkijena.jipipe.ui.cache.exporters
 
JIPipeDataTableToFilesByMetadataExporterRun(JIPipeWorkbench, List<? extends JIPipeDataTable>, boolean) - Constructor for class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToFilesByMetadataExporterRun
 
JIPipeDataTableToFilesByMetadataExporterRun.Settings - Class in org.hkijena.jipipe.ui.cache.exporters
 
JIPipeDataTableToOutputExporterRun - Class in org.hkijena.jipipe.ui.cache.exporters
 
JIPipeDataTableToOutputExporterRun(JIPipeWorkbench, Path, List<? extends JIPipeDataTable>, boolean, boolean) - Constructor for class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToOutputExporterRun
 
JIPipeDataTableToZIPExporterRun - Class in org.hkijena.jipipe.ui.cache.exporters
 
JIPipeDataTableToZIPExporterRun(JIPipeWorkbench, Path, JIPipeDataTable) - Constructor for class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToZIPExporterRun
 
JIPipeDataThumbnailsMetadata - Class in org.hkijena.jipipe.api.data
Stores the properties of the available thumbnails
JIPipeDataThumbnailsMetadata() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata
 
JIPipeDataThumbnailsMetadata.Thumbnail - Class in org.hkijena.jipipe.api.data
 
JIPipeDataTypeCompendiumUI - Class in org.hkijena.jipipe.ui.documentation
 
JIPipeDataTypeCompendiumUI() - Constructor for class org.hkijena.jipipe.ui.documentation.JIPipeDataTypeCompendiumUI
 
JIPipeDataTypePicker - Class in org.hkijena.jipipe.ui.components.pickers
Panel that allows to pick JIPipeDataInfo
JIPipeDataTypePicker(JIPipeDataTypePicker.Mode, Set<JIPipeDataInfo>) - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker
 
JIPipeDataTypePicker.DataTypeDeselectedEvent - Class in org.hkijena.jipipe.ui.components.pickers
Generated when a data type is deselected
JIPipeDataTypePicker.DataTypeDeselectedEventEmitter - Class in org.hkijena.jipipe.ui.components.pickers
 
JIPipeDataTypePicker.DataTypeDeselectedEventListener - Interface in org.hkijena.jipipe.ui.components.pickers
 
JIPipeDataTypePicker.DataTypeSelectedEvent - Class in org.hkijena.jipipe.ui.components.pickers
Generated when a data type is selected
JIPipeDataTypePicker.DataTypeSelectedEventEmitter - Class in org.hkijena.jipipe.ui.components.pickers
 
JIPipeDataTypePicker.DataTypeSelectedEventListener - Interface in org.hkijena.jipipe.ui.components.pickers
 
JIPipeDataTypePicker.Mode - Enum in org.hkijena.jipipe.ui.components.pickers
The mode of the picker
JIPipeDataTypePicker.Renderer - Class in org.hkijena.jipipe.ui.components.pickers
Renders an item
JIPipeDataTypePicker.SelectedDataTypesChangedEvent - Class in org.hkijena.jipipe.ui.components.pickers
Generated when a data type is selected
JIPipeDataTypePicker.SelectedDataTypesChangedEventEmitter - Class in org.hkijena.jipipe.ui.components.pickers
 
JIPipeDataTypePicker.SelectedDataTypesChangedEventListener - Interface in org.hkijena.jipipe.ui.components.pickers
 
JIPipeDatatypeRegistry - Class in org.hkijena.jipipe.api.registries
Contains known JIPipeData types, and associates them to their respective JIPipeDataSlot.
JIPipeDatatypeRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Creates a new instance
JIPipeDatatypeRegistry.DataConverterEdge - Class in org.hkijena.jipipe.api.registries
Edge between JIPipeDataInfo instances that indicate a conversion
JIPipeDedicatedGraphHistoryJournal - Class in org.hkijena.jipipe.api.history
 
JIPipeDedicatedGraphHistoryJournal(JIPipeGraph) - Constructor for class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal
 
JIPipeDedicatedGraphHistoryJournal.Snapshot - Class in org.hkijena.jipipe.api.history
Stores all information about the state of a
JIPipeDefaultGraphEditorTool - Class in org.hkijena.jipipe.api.grapheditortool
 
JIPipeDefaultGraphEditorTool() - Constructor for class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
JIPipeDefaultJavaPlugin - Class in org.hkijena.jipipe
Default implementation of JIPipeJavaPlugin
JIPipeDefaultJavaPlugin() - Constructor for class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Creates a new instance
JIPipeDefaultMutableSlotConfiguration - Class in org.hkijena.jipipe.api.data
A schema for slots
JIPipeDefaultMutableSlotConfiguration() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Creates a new instance
JIPipeDefaultMutableSlotConfiguration.Builder - Class in org.hkijena.jipipe.api.data
A builder for creating a configuration
JIPipeDefaultNodeRegistrationTask - Class in org.hkijena.jipipe.api.registries
Mutable implementation of JIPipeNodeRegistrationTask
JIPipeDefaultNodeRegistrationTask() - Constructor for class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask
Creates a new task
JIPipeDefaultParameterCollectionContextAction - Class in org.hkijena.jipipe.api.parameters
 
JIPipeDefaultParameterCollectionContextAction(SetJIPipeDocumentation, URL, Consumer<JIPipeWorkbench>) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterCollectionContextAction
 
JIPipeDefaultParameterTypeInfo - Class in org.hkijena.jipipe.api.parameters
Standard implementation of JIPipeParameterTypeInfo
JIPipeDefaultParameterTypeInfo(String, Class<?>, Supplier<Object>, Function<Object, Object>, String, String) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterTypeInfo
 
JIPipeDefaultResultDataSlotPreview - Class in org.hkijena.jipipe.ui.resultanalysis
Renders a JIPipeDataSlot row as table cell
JIPipeDefaultResultDataSlotPreview(JIPipeProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableMetadataRow, JIPipeExportedDataAnnotation) - Constructor for class org.hkijena.jipipe.ui.resultanalysis.JIPipeDefaultResultDataSlotPreview
Creates a new renderer
JIPipeDefaultResultDataSlotRowUI - Class in org.hkijena.jipipe.ui.resultanalysis
Provides a standard result slot UI that can be also further extended.
JIPipeDefaultResultDataSlotRowUI(JIPipeProjectWorkbench, JIPipeDataSlot, JIPipeDataTableMetadataRow) - Constructor for class org.hkijena.jipipe.ui.resultanalysis.JIPipeDefaultResultDataSlotRowUI
Creates a new UI
JIPipeDependency - Interface in org.hkijena.jipipe
Encapsulates a dependency such as an extension or JSON extension
JIPipeDocumentation - Class in org.hkijena.jipipe.api
Default implementation of SetJIPipeDocumentation
JIPipeDocumentation(String, String) - Constructor for class org.hkijena.jipipe.api.JIPipeDocumentation
 
JIPipeDocumentation(String, String, Class<?>) - Constructor for class org.hkijena.jipipe.api.JIPipeDocumentation
 
JIPipeDummyGraphHistoryJournal - Class in org.hkijena.jipipe.api.history
 
JIPipeDummyGraphHistoryJournal() - Constructor for class org.hkijena.jipipe.api.history.JIPipeDummyGraphHistoryJournal
 
JIPipeDummyParameterCollection - Class in org.hkijena.jipipe.api.parameters
A JIPipeParameterCollection that stores exactly one value (an object) This is used in conjunction with JIPipeManualParameterAccess
JIPipeDummyParameterCollection() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDummyParameterCollection
 
JIPipeDummyWorkbench - Class in org.hkijena.jipipe.ui
A dummy implementation of JIPipeWorkbench that will trigger no errors, but will not work for various functions.
JIPipeDummyWorkbench() - Constructor for class org.hkijena.jipipe.ui.JIPipeDummyWorkbench
 
JIPipeDynamicParameterCollection - Class in org.hkijena.jipipe.api.parameters
Holds a user-definable set of parameters
JIPipeDynamicParameterCollection() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
 
JIPipeDynamicParameterCollection(boolean) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Creates a new instance.
JIPipeDynamicParameterCollection(JIPipeDynamicParameterCollection) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Copies the parameters from the original
JIPipeDynamicParameterCollection(boolean, Set<JIPipeParameterTypeInfo>) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Creates a new instance
JIPipeDynamicParameterCollection(boolean, Class<?>[]) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Creates a new instance
JIPipeDynamicParameterCollection.BeforeAddParameterEvent - Class in org.hkijena.jipipe.api.parameters
 
JIPipeDynamicParameterCollection.BeforeAddParameterEventEmitter - Class in org.hkijena.jipipe.api.parameters
 
JIPipeDynamicParameterCollection.BeforeAddParameterEventListener - Interface in org.hkijena.jipipe.api.parameters
 
JIPipeDynamicParameterCollection.Deserializer - Class in org.hkijena.jipipe.api.parameters
 
JIPipeDynamicParameterCollection.UserParameterDefinition - Class in org.hkijena.jipipe.api.parameters
Parameter definition by a user
JIPipeEmptyData - Class in org.hkijena.jipipe.api.data
 
JIPipeEmptyData() - Constructor for class org.hkijena.jipipe.api.data.JIPipeEmptyData
 
JIPipeEmptyNodeInfo - Class in org.hkijena.jipipe.api.nodes.infos
An empty algorithm info.
JIPipeEmptyNodeInfo() - Constructor for class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo
 
JIPipeEmptyNodeInfo.Serializer - Class in org.hkijena.jipipe.api.nodes.infos
Serializes the empty algorithm info
JIPipeEmptyThumbnailData - Class in org.hkijena.jipipe.api.data.thumbnails
 
JIPipeEmptyThumbnailData() - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeEmptyThumbnailData
 
JIPipeEnvironment - Class in org.hkijena.jipipe.api.environments
Defines an environment
JIPipeEnvironment() - Constructor for class org.hkijena.jipipe.api.environments.JIPipeEnvironment
 
JIPipeEnvironment(JIPipeEnvironment) - Constructor for class org.hkijena.jipipe.api.environments.JIPipeEnvironment
 
JIPipeEvent - Interface in org.hkijena.jipipe.api.events
Contains information about an event emitted by JIPipeEventEmitter
JIPipeEventEmitter<Event extends JIPipeEvent,Listener> - Class in org.hkijena.jipipe.api.events
An event emitter
JIPipeEventEmitter() - Constructor for class org.hkijena.jipipe.api.events.JIPipeEventEmitter
 
JIPipeEventEmitter.LambdaSubscriber<Event extends JIPipeEvent,Listener> - Class in org.hkijena.jipipe.api.events
 
JIPipeEventEmitter.StrongObjectSubscriber<Event extends JIPipeEvent,Listener> - Class in org.hkijena.jipipe.api.events
 
JIPipeEventEmitter.Subscriber<Event extends JIPipeEvent,Listener> - Interface in org.hkijena.jipipe.api.events
 
JIPipeEventEmitter.WeakObjectSubscriber<Event extends JIPipeEvent,Listener> - Class in org.hkijena.jipipe.api.events
 
JIPipeExportedCompartment - Class in org.hkijena.jipipe.api.compartments
JIPipeExportedCompartment() - Constructor for class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment
Creates a new instance
JIPipeExportedCompartment(JIPipeProjectCompartment) - Constructor for class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment
Initializes the instance from a compartment
JIPipeExportedCompartment.Deserializer - Class in org.hkijena.jipipe.api.compartments
Deserializes the compartment
JIPipeExportedCompartment.Serializer - Class in org.hkijena.jipipe.api.compartments
Serializes the compartment
JIPipeExportedDataAnnotation - Class in org.hkijena.jipipe.api.data
 
JIPipeExportedDataAnnotation() - Constructor for class org.hkijena.jipipe.api.data.JIPipeExportedDataAnnotation
 
JIPipeExportedDataAnnotation(String, Path, String, JIPipeDataTableMetadataRow) - Constructor for class org.hkijena.jipipe.api.data.JIPipeExportedDataAnnotation
 
JIPipeExpressionEvaluator - Class in org.hkijena.jipipe.extensions.expressions
Describes basic properties of a AbstractExpressionParameter
JIPipeExpressionEvaluator() - Constructor for class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
JIPipeExpressionEvaluatorSyntaxTokenMaker - Class in org.hkijena.jipipe.extensions.expressions
Generates tokens for an ExpressionEvaluator instance.
JIPipeExpressionEvaluatorSyntaxTokenMaker() - Constructor for class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluatorSyntaxTokenMaker
 
JIPipeExpressionParameter - Class in org.hkijena.jipipe.extensions.expressions
An AbstractExpressionParameter that utilizes the JIPipeExpressionEvaluator to generate results
JIPipeExpressionParameter() - Constructor for class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionParameter
 
JIPipeExpressionParameter(String) - Constructor for class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionParameter
 
JIPipeExpressionParameter(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionParameter
 
JIPipeExpressionParameter.List - Class in org.hkijena.jipipe.extensions.expressions
 
JIPipeExpressionParameterEditorUI - Class in org.hkijena.jipipe.extensions.expressions.ui
 
JIPipeExpressionParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.expressions.ui.JIPipeExpressionParameterEditorUI
Creates new instance
JIPipeExpressionParameterSettings - Annotation Type in org.hkijena.jipipe.extensions.expressions
Controls the behavior of an AbstractExpressionParameter.
JIPipeExpressionParameterVariable - Annotation Type in org.hkijena.jipipe.extensions.expressions
Alternative to creating an ExpressionParameterVariablesInfo class and attaching it to JIPipeExpressionParameterSettings.
JIPipeExpressionParameterVariableInfo - Class in org.hkijena.jipipe.extensions.expressions
 
JIPipeExpressionParameterVariableInfo(String, String, String) - Constructor for class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionParameterVariableInfo
 
JIPipeExpressionParameterVariables - Annotation Type in org.hkijena.jipipe.extensions.expressions
JIPipeExpressionRegistry - Class in org.hkijena.jipipe.api.registries
Registry for table operations and other functional expressions
JIPipeExpressionRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry
 
JIPipeExpressionRegistry.ColumnOperationEntry - Class in org.hkijena.jipipe.api.registries
A column operation entry
JIPipeExpressionRegistry.ExpressionFunctionEntry - Class in org.hkijena.jipipe.api.registries
 
JIPipeExpressionVariablesMap - Class in org.hkijena.jipipe.extensions.expressions
Object that carries variables for expressions
JIPipeExpressionVariablesMap() - Constructor for class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionVariablesMap
 
JIPipeExpressionVariablesMap(JIPipeExpressionVariablesMap) - Constructor for class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionVariablesMap
 
JIPipeExtendedDataTableModel - Class in org.hkijena.jipipe.ui.datatable
Wraps around a JIPipeDataTable to display additional columns.
JIPipeExtendedDataTableModel(JTable, Store<JIPipeDataTable>) - Constructor for class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableModel
Creates a new instance
JIPipeExtendedDataTableUI - Class in org.hkijena.jipipe.ui.datatable
UI that displays a JIPipeDataTable that is cached
JIPipeExtendedDataTableUI(JIPipeWorkbench, Store<JIPipeDataTable>, boolean) - Constructor for class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableUI
 
JIPipeExtendedDataTableUI.WrapperColumnHeaderRenderer - Class in org.hkijena.jipipe.ui.datatable
Renders the column header of JIPipeExtendedDataTableModel
JIPipeExtendedMultiDataTableModel - Class in org.hkijena.jipipe.ui.datatable
Merges multiple JIPipeDataTable Please not the previews are initialized with deferred rendering.
JIPipeExtendedMultiDataTableModel(JTable, boolean) - Constructor for class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
JIPipeExtendedMultiDataTableUI - Class in org.hkijena.jipipe.ui.datatable
Displays multiple JIPipeDataTable in one table.
JIPipeExtendedMultiDataTableUI(JIPipeWorkbench, List<Store<JIPipeDataTable>>, boolean) - Constructor for class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableUI
 
JIPipeExtendedMultiDataTableUI.MultiDataSlotTableColumnRenderer - Class in org.hkijena.jipipe.ui.datatable
Renders the column header
JIPipeExtensionRegistry - Class in org.hkijena.jipipe.api.registries
Registry for managing extensions
JIPipeExtensionRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
JIPipeExtensionRegistry.ScheduledActivateExtensionEvent - Class in org.hkijena.jipipe.api.registries
Triggered by JIPipeExtensionRegistry when an extension is scheduled to be activated
JIPipeExtensionRegistry.ScheduledActivateExtensionEventEmitter - Class in org.hkijena.jipipe.api.registries
 
JIPipeExtensionRegistry.ScheduledActivateExtensionEventListener - Interface in org.hkijena.jipipe.api.registries
 
JIPipeExtensionRegistry.ScheduledDeactivateExtensionEvent - Class in org.hkijena.jipipe.api.registries
Triggered by JIPipeExtensionRegistry when an extension is scheduled to be deactivated
JIPipeExtensionRegistry.ScheduledDeactivateExtensionEventEmitter - Class in org.hkijena.jipipe.api.registries
 
JIPipeExtensionRegistry.ScheduledDeactivateExtensionEventListener - Interface in org.hkijena.jipipe.api.registries
 
JIPipeExtensionRegistry.Settings - Class in org.hkijena.jipipe.api.registries
 
JIPipeExternalEnvironmentRegistry - Class in org.hkijena.jipipe.api.registries
A registry for external environments
JIPipeExternalEnvironmentRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry
 
JIPipeExternalEnvironmentRegistry.InstallerEntry - Class in org.hkijena.jipipe.api.registries
An entry describing an installer
JIPipeFastThumbnail - Annotation Type in org.hkijena.jipipe.api.data.thumbnails
Marks a type to bypass the thumbnail generation queue and schedule thumbnails into the Swing threading system instead Do not use for types that may need heavy processing for thumbnail generation
JIPipeFileSystemReadDataStorage - Class in org.hkijena.jipipe.api.data.storage
Storage on a file system
JIPipeFileSystemReadDataStorage(JIPipeProgressInfo, Path) - Constructor for class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage
 
JIPipeFileSystemReadDataStorage(JIPipeProgressInfo, Path, Path) - Constructor for class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage
 
JIPipeFileSystemWriteDataStorage - Class in org.hkijena.jipipe.api.data.storage
Storage on a file system.
JIPipeFileSystemWriteDataStorage(JIPipeProgressInfo, Path) - Constructor for class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage
 
JIPipeFileSystemWriteDataStorage(JIPipeProgressInfo, Path, Path) - Constructor for class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage
 
JIPipeFixedThreadPool - Class in org.hkijena.jipipe.api
Contains a fixed thread pool.
JIPipeFixedThreadPool(int) - Constructor for class org.hkijena.jipipe.api.JIPipeFixedThreadPool
Initializes a pool with the specified amount of threads.
JIPipeFunctionallyComparable - Interface in org.hkijena.jipipe.api
Implement this interface to allow the comparison of function (i.e. two objects can be different, but have the same function and yield the same results) Useful for custom parameter types.
JIPipeGraph - Class in org.hkijena.jipipe.api.nodes
Manages multiple JIPipeGraphNode instances as graph
JIPipeGraph() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph
Creates a new node type graph
JIPipeGraph(JIPipeGraph) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph
Creates a deep copy of the other algorithm graph.
JIPipeGraph.Deserializer - Class in org.hkijena.jipipe.api.nodes
Deserializes an JIPipeGraph
JIPipeGraph.GraphChangedEvent - Class in org.hkijena.jipipe.api.nodes
Event is triggered when algorithm graph is changed
JIPipeGraph.GraphChangedEventEmitter - Class in org.hkijena.jipipe.api.nodes
 
JIPipeGraph.GraphChangedEventListener - Interface in org.hkijena.jipipe.api.nodes
 
JIPipeGraph.NodeAddedEvent - Class in org.hkijena.jipipe.api.nodes
 
JIPipeGraph.NodeAddedEventEmitter - Class in org.hkijena.jipipe.api.nodes
 
JIPipeGraph.NodeAddedEventListener - Interface in org.hkijena.jipipe.api.nodes
 
JIPipeGraph.NodeConnectedEvent - Class in org.hkijena.jipipe.api.nodes
Generated when a connection was made in JIPipeGraph
JIPipeGraph.NodeConnectedEventEmitter - Class in org.hkijena.jipipe.api.nodes
 
JIPipeGraph.NodeConnectedEventListener - Interface in org.hkijena.jipipe.api.nodes
 
JIPipeGraph.NodeDisconnectedEvent - Class in org.hkijena.jipipe.api.nodes
Generated when slots are disconnected
JIPipeGraph.NodeDisconnectedEventEmitter - Class in org.hkijena.jipipe.api.nodes
 
JIPipeGraph.NodeDisconnectedEventListener - Interface in org.hkijena.jipipe.api.nodes
 
JIPipeGraph.NodeRemovedEvent - Class in org.hkijena.jipipe.api.nodes
 
JIPipeGraph.NodeRemovedEventEmitter - Class in org.hkijena.jipipe.api.nodes
 
JIPipeGraph.NodeRemovedEventListener - Interface in org.hkijena.jipipe.api.nodes
 
JIPipeGraph.Serializer - Class in org.hkijena.jipipe.api.nodes
Serializes an JIPipeGraph
JIPipeGraphCanvasUI - Class in org.hkijena.jipipe.ui.grapheditor.general
UI that displays an JIPipeGraph
JIPipeGraphCanvasUI(JIPipeWorkbench, JIPipeGraphEditorUI, JIPipeGraph, UUID, JIPipeHistoryJournal) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Creates a new UI
JIPipeGraphCanvasUI.ConnectHighlight - Class in org.hkijena.jipipe.ui.grapheditor.general
 
JIPipeGraphCanvasUI.DisconnectHighlight - Class in org.hkijena.jipipe.ui.grapheditor.general
 
JIPipeGraphCanvasUI.DisplayedSlotEdge - Class in org.hkijena.jipipe.ui.grapheditor.general
 
JIPipeGraphCanvasUI.EdgeMuteMode - Enum in org.hkijena.jipipe.ui.grapheditor.general
 
JIPipeGraphCanvasUI.GraphCanvasUpdatedEvent - Class in org.hkijena.jipipe.ui.grapheditor.general
Triggered when a graph canvas was updated
JIPipeGraphCanvasUI.GraphCanvasUpdatedEventEmitter - Class in org.hkijena.jipipe.ui.grapheditor.general
 
JIPipeGraphCanvasUI.GraphCanvasUpdatedEventListener - Interface in org.hkijena.jipipe.ui.grapheditor.general
 
JIPipeGraphCanvasUI.NodeSelectionChangedEvent - Class in org.hkijena.jipipe.ui.grapheditor.general
Triggered when An JIPipeGraphCanvasUI selection was changed
JIPipeGraphCanvasUI.NodeSelectionChangedEventEmitter - Class in org.hkijena.jipipe.ui.grapheditor.general
 
JIPipeGraphCanvasUI.NodeSelectionChangedEventListener - Interface in org.hkijena.jipipe.ui.grapheditor.general
 
JIPipeGraphCanvasUI.NodeUISelectedEvent - Class in org.hkijena.jipipe.ui.grapheditor.general
Generated when an algorithm is selected
JIPipeGraphCanvasUI.NodeUISelectedEventEmitter - Class in org.hkijena.jipipe.ui.grapheditor.general
 
JIPipeGraphCanvasUI.NodeUISelectedEventListener - Interface in org.hkijena.jipipe.ui.grapheditor.general
 
JIPipeGraphConnection - Class in org.hkijena.jipipe.api.nodes
A pair-like object that contains a connection within a JIPipeGraph
JIPipeGraphConnection(JIPipeGraph, JIPipeDataSlot, JIPipeDataSlot, JIPipeGraphEdge) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphConnection
 
JIPipeGraphDragAndDropBehavior - Interface in org.hkijena.jipipe.ui.grapheditor.general
Provides Drag and Drop behavior for JIPipeGraphCanvasUI
JIPipeGraphEdge - Class in org.hkijena.jipipe.api.nodes
A custom graph edge
JIPipeGraphEdge() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphEdge
Initializes a new graph edge that cannot be disconnected by users
JIPipeGraphEdge(boolean) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphEdge
Initializes a new graph edge
JIPipeGraphEdge.Shape - Enum in org.hkijena.jipipe.api.nodes
Available line shapes
JIPipeGraphEdge.Visibility - Enum in org.hkijena.jipipe.api.nodes
 
JIPipeGraphEditorMinimap - Class in org.hkijena.jipipe.ui.grapheditor.general
Renders a overview of the graph
JIPipeGraphEditorMinimap(JIPipeGraphEditorUI) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorMinimap
 
JIPipeGraphEditorTool - Interface in org.hkijena.jipipe.api.grapheditortool
 
JIPipeGraphEditorToolRegistry - Class in org.hkijena.jipipe.api.registries
 
JIPipeGraphEditorToolRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeGraphEditorToolRegistry
 
JIPipeGraphEditorUI - Class in org.hkijena.jipipe.ui.grapheditor.general
A panel around JIPipeGraphCanvasUI that comes with scrolling/panning, properties panel, and a menu bar
JIPipeGraphEditorUI(JIPipeWorkbench, JIPipeGraph, UUID, JIPipeHistoryJournal, GraphEditorUISettings, int) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
JIPipeGraphEditorUI(JIPipeWorkbench, JIPipeGraph, UUID, JIPipeHistoryJournal) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
JIPipeGraphEditorUI.NavigationRenderer - Class in org.hkijena.jipipe.ui.grapheditor.general
Renders items in the navigator
JIPipeGraphNode - Class in org.hkijena.jipipe.api.nodes
A node is a set of input and output data slots, and a run() function It is part of the JIPipeGraph.
JIPipeGraphNode(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Initializes this algorithm with a custom provided slot configuration
JIPipeGraphNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Initializes a new node type instance
JIPipeGraphNode(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Copies the input algorithm's properties into this algorithm
JIPipeGraphNode.BaseDirectoryChangedEvent - Class in org.hkijena.jipipe.api.nodes
Triggered when the base directory of a project or algorithm was changed
JIPipeGraphNode.BaseDirectoryChangedEventEmitter - Class in org.hkijena.jipipe.api.nodes
 
JIPipeGraphNode.BaseDirectoryChangedEventListener - Interface in org.hkijena.jipipe.api.nodes
 
JIPipeGraphNode.NodeSlotsChangedEvent - Class in org.hkijena.jipipe.api.nodes
Triggered when an algorithm's slots change
JIPipeGraphNode.NodeSlotsChangedEventEmitter - Class in org.hkijena.jipipe.api.nodes
 
JIPipeGraphNode.NodeSlotsChangedEventListener - Interface in org.hkijena.jipipe.api.nodes
 
JIPipeGraphNode.Serializer - Class in org.hkijena.jipipe.api.nodes
Serializes an JIPipeGraphNode instance
JIPipeGraphNodeRunContext - Class in org.hkijena.jipipe.api.nodes
 
JIPipeGraphNodeRunContext() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphNodeRunContext
 
JIPipeGraphNodeUI - Class in org.hkijena.jipipe.ui.grapheditor.general.nodeui
UI around an JIPipeGraphNode instance
JIPipeGraphNodeUI(JIPipeWorkbench, JIPipeGraphCanvasUI, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
Creates a new UI
JIPipeGraphNodeUI.DefaultNodeUIActionRequestedEvent - Class in org.hkijena.jipipe.ui.grapheditor.general.nodeui
Triggered when an JIPipeGraphNodeUI requests a default action (double click)
JIPipeGraphNodeUI.DefaultNodeUIActionRequestedEventEmitter - Class in org.hkijena.jipipe.ui.grapheditor.general.nodeui
 
JIPipeGraphNodeUI.DefaultNodeUIActionRequestedEventListener - Interface in org.hkijena.jipipe.ui.grapheditor.general.nodeui
 
JIPipeGraphNodeUI.NodeUIActionRequestedEvent - Class in org.hkijena.jipipe.ui.grapheditor.general.nodeui
An action that is requested by an JIPipeGraphNodeUI and passed down to a JIPipeGraphEditorUI
JIPipeGraphNodeUI.NodeUIActionRequestedEventEmitter - Class in org.hkijena.jipipe.ui.grapheditor.general.nodeui
 
JIPipeGraphNodeUI.NodeUIActionRequestedEventListener - Interface in org.hkijena.jipipe.ui.grapheditor.general.nodeui
 
JIPipeGraphNodeUI.SlotStatus - Enum in org.hkijena.jipipe.ui.grapheditor.general.nodeui
 
JIPipeGraphRun - Class in org.hkijena.jipipe.api.run
 
JIPipeGraphRun(JIPipeGraphRun, JIPipeGraph, JIPipeGraphRunConfiguration) - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRun
 
JIPipeGraphRun(JIPipeProject, JIPipeGraphRunConfiguration) - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRun
 
JIPipeGraphRunConfiguration - Class in org.hkijena.jipipe.api.run
Settings for an JIPipeGraphRun
JIPipeGraphRunConfiguration() - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
JIPipeGraphRunConfiguration(JIPipeGraphRunConfiguration) - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
JIPipeGraphRunDataFlowGraph - Class in org.hkijena.jipipe.api.run
Graph that contains input slots, nodes, and output slots with weights Contains JIPipeInputDataSlot, JIPipeOutputDataSlot, and JIPipeGraphNode Used for finding the optimal path through the graph.
JIPipeGraphRunDataFlowGraph() - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph
 
JIPipeGraphRunDataFlowGraph(JIPipeGraph, Set<JIPipeGraphNode>) - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph
 
JIPipeGraphRunGCGraph - Class in org.hkijena.jipipe.api.run
A graph that allows to track which data is currently being used Contains JIPipeInputDataSlot, JIPipeOutputDataSlot, and JIPipeGraphNode Unlike the JIPipeGraphRunDataFlowGraph, this graph works on edges
JIPipeGraphRunGCGraph() - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph
 
JIPipeGraphRunGCGraph(JIPipeGraph, Set<JIPipeGraphNode>) - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph
 
JIPipeGraphRunGCGraph.GCEvent - Class in org.hkijena.jipipe.api.run
 
JIPipeGraphRunGCGraph.GCEventEmitter - Class in org.hkijena.jipipe.api.run
 
JIPipeGraphRunGCGraph.GCEventListener - Interface in org.hkijena.jipipe.api.run
 
JIPipeGraphRunPartitionGraph - Class in org.hkijena.jipipe.api.run
 
JIPipeGraphRunPartitionGraph(JIPipeGraphRun) - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunPartitionGraph
 
JIPipeGraphRunPartitionGraph(JIPipeGraph, JIPipeGraphRun) - Constructor for class org.hkijena.jipipe.api.run.JIPipeGraphRunPartitionGraph
 
JIPipeGraphRunPartitionInheritedBoolean - Enum in org.hkijena.jipipe.api.run
 
JIPipeGraphType - Enum in org.hkijena.jipipe.api
Attached to JIPipeGraph instances to indicate which kind of graph they are
JIPipeGraphViewMode - Enum in org.hkijena.jipipe.ui.grapheditor
The direction how a canvas renders the nodes
JIPipeGraphWrapperAlgorithm - Class in org.hkijena.jipipe.api.grouping
An algorithm that wraps another algorithm graph
JIPipeGraphWrapperAlgorithm(JIPipeNodeInfo, JIPipeGraph) - Constructor for class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
JIPipeGraphWrapperAlgorithm(JIPipeGraphWrapperAlgorithm) - Constructor for class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
Copies the algorithm
JIPipeGraphWrapperAlgorithm.IterationMode - Enum in org.hkijena.jipipe.api.grouping
Determines how the data is iterated
JIPipeGraphWrapperAlgorithm.IterationModeEnumInfo - Class in org.hkijena.jipipe.api.grouping
 
JIPipeGridThumbnailData - Class in org.hkijena.jipipe.api.data.thumbnails
 
JIPipeGridThumbnailData(List<JIPipeThumbnailData>) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData
 
JIPipeGridThumbnailData(JIPipeGridThumbnailData) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData
 
JIPipeGUICommand - Class in org.hkijena.jipipe
Command that runs the GUI
JIPipeGUICommand() - Constructor for class org.hkijena.jipipe.JIPipeGUICommand
 
JIPipeHistoryJournal - Interface in org.hkijena.jipipe.api.history
Base class for all journals that track the history of projects or graphs
JIPipeHistoryJournal.HistoryChangedEvent - Class in org.hkijena.jipipe.api.history
Event when the history log was changed
JIPipeHistoryJournal.HistoryChangedEventEmitter - Class in org.hkijena.jipipe.api.history
 
JIPipeHistoryJournal.HistoryChangedEventListener - Interface in org.hkijena.jipipe.api.history
 
JIPipeHistoryJournalSnapshot - Interface in org.hkijena.jipipe.api.history
 
JIPipeHistorySnapshotListCellRenderer - Class in org.hkijena.jipipe.ui.history
JIPipeHistorySnapshotListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.history.JIPipeHistorySnapshotListCellRenderer
Creates a new renderer
JIPipeIconLabelThumbnailData - Class in org.hkijena.jipipe.api.data.thumbnails
 
JIPipeIconLabelThumbnailData(String, String) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData
 
JIPipeIconLabelThumbnailData(JIPipeIconLabelThumbnailData) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData
 
JIPipeIconPickerDialog - Class in org.hkijena.jipipe.ui.components.pickers
Dialog that picks an icon
JIPipeIconPickerDialog(Window, String, Set<String>) - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeIconPickerDialog
 
JIPipeImageJAdapterRegistry - Class in org.hkijena.jipipe.api.registries
Registers all known adapters between ImageJ and JIPipe data types
JIPipeImageJAdapterRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry
 
JIPipeImageJPluginManager - Class in org.hkijena.jipipe.ui.ijupdater
JIPipe's own implementation of the ImageJ updater ImageJUpdater
JIPipeImageJPluginManager(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.ui.ijupdater.JIPipeImageJPluginManager
 
JIPipeImageJPluginManager(JIPipeWorkbench, boolean) - Constructor for class org.hkijena.jipipe.ui.ijupdater.JIPipeImageJPluginManager
 
JIPipeImageJUpdateSiteDependency - Class in org.hkijena.jipipe
A dependency that points to an ImageJ update site.
JIPipeImageJUpdateSiteDependency() - Constructor for class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency
 
JIPipeImageJUpdateSiteDependency(String, String) - Constructor for class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency
 
JIPipeImageJUpdateSiteDependency(UpdateSite) - Constructor for class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency
Initializes the dependency from an update site
JIPipeImageJUpdateSiteDependency(JIPipeImageJUpdateSiteDependency) - Constructor for class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency
 
JIPipeImageJUpdateSiteDependency.List - Class in org.hkijena.jipipe
the List class
JIPipeImageThumbnailData - Class in org.hkijena.jipipe.api.data.thumbnails
 
JIPipeImageThumbnailData(ImagePlus) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData
 
JIPipeImageThumbnailData(ImageProcessor) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData
 
JIPipeImageThumbnailData(Image) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData
 
JIPipeImageThumbnailData(JIPipeImageThumbnailData) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData
 
JIPipeImageViewer - Class in org.hkijena.jipipe.extensions.imageviewer
 
JIPipeImageViewer(JIPipeWorkbench, List<Class<? extends JIPipeImageViewerPlugin>>, Map<Class<?>, Object>) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
Initializes a new image viewer
JIPipeImageViewerCacheDataViewerWindow - Class in org.hkijena.jipipe.extensions.imageviewer
JIPipeImageViewerCacheDataViewerWindow(JIPipeWorkbench, JIPipeDataTableDataSource, String) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerCacheDataViewerWindow
 
JIPipeImageViewerPlugin - Class in org.hkijena.jipipe.extensions.imageviewer
 
JIPipeImageViewerPlugin(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin
 
JIPipeImageViewerPlugin2D - Class in org.hkijena.jipipe.extensions.imageviewer
 
JIPipeImageViewerPlugin2D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin2D
 
JIPipeImageViewerPlugin3D - Class in org.hkijena.jipipe.extensions.imageviewer
 
JIPipeImageViewerPlugin3D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin3D
 
JIPipeImageViewerWindow - Class in org.hkijena.jipipe.extensions.imageviewer
 
JIPipeImageViewerWindow(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerWindow
 
JIPipeImageViewerWindow(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerWindow
 
JIPipeImportCachedSlotOutputRun - Class in org.hkijena.jipipe.ui.cache.importers
 
JIPipeImportCachedSlotOutputRun(JIPipeProject, JIPipeGraphNode, Path) - Constructor for class org.hkijena.jipipe.ui.cache.importers.JIPipeImportCachedSlotOutputRun
 
JIPipeInheritanceConversionListCellRenderer - Class in org.hkijena.jipipe.ui.components.renderers
Renders inheritance conversion entries
JIPipeInheritanceConversionListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.components.renderers.JIPipeInheritanceConversionListCellRenderer
Creates a new renderer
JIPipeInputDataSlot - Class in org.hkijena.jipipe.api.data
 
JIPipeInputDataSlot(JIPipeDataSlotInfo, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.data.JIPipeInputDataSlot
 
JIPipeInputDataSlot(JIPipeDataSlot, boolean, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.api.data.JIPipeInputDataSlot
 
JIPipeIOSlotConfiguration - Class in org.hkijena.jipipe.api.nodes
Slot configuration that always ensures 1:1 relation between input and output slots
JIPipeIOSlotConfiguration() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeIOSlotConfiguration
Creates a new instance
JIPipeIteratingAlgorithm - Class in org.hkijena.jipipe.api.nodes.algorithm
An JIPipeAlgorithm that iterates through each data row.
JIPipeIteratingAlgorithm(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm
Creates a new instance
JIPipeIteratingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm
Creates a new instance
JIPipeIteratingAlgorithm(JIPipeIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm
Copies the algorithm
JIPipeIteratingAlgorithmIterationStepGenerationSettings - Class in org.hkijena.jipipe.api.nodes.algorithm
Groups iteration step generation settings
JIPipeIteratingAlgorithmIterationStepGenerationSettings() - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
JIPipeIteratingAlgorithmIterationStepGenerationSettings(JIPipeIteratingAlgorithmIterationStepGenerationSettings) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
JIPipeIteratingMissingDataGeneratorAlgorithm - Class in org.hkijena.jipipe.api.nodes.algorithm
An JIPipeAlgorithm that passes incoming data to their corresponding output slots if the data batch is complete and otherwise runs a generator function that generates missing data items.
JIPipeIteratingMissingDataGeneratorAlgorithm(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm
Creates a new instance
JIPipeIteratingMissingDataGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm
Creates a new instance
JIPipeIteratingMissingDataGeneratorAlgorithm(JIPipeIteratingMissingDataGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm
Copies the algorithm
JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings - Class in org.hkijena.jipipe.api.nodes.algorithm
Groups iteration step generation settings
JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings() - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings(JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
JIPipeIterationContext - Interface in org.hkijena.jipipe.api.nodes.iterationstep
 
JIPipeIterationStep - Interface in org.hkijena.jipipe.api.nodes.iterationstep
 
JIPipeIterationStepAlgorithm - Interface in org.hkijena.jipipe.api.nodes.iterationstep
Methods shared across all JIPipeAlgorithm that generate data batches
JIPipeIterationStepGenerationSettings - Interface in org.hkijena.jipipe.api.nodes.iterationstep
 
JIPipeJavaExtensionInitializationInfo - Class in org.hkijena.jipipe
 
JIPipeJavaExtensionInitializationInfo() - Constructor for class org.hkijena.jipipe.JIPipeJavaExtensionInitializationInfo
 
JIPipeJavaNodeInfo - Class in org.hkijena.jipipe.api.nodes.infos
JIPipeNodeInfo for an algorithm that is defined in Java code All necessary properties are extracted from class attributes
JIPipeJavaNodeInfo(String, Class<? extends JIPipeGraphNode>) - Constructor for class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo
Creates a new node type info
JIPipeJavaNodeInfo.Serializer - Class in org.hkijena.jipipe.api.nodes.infos
Serializes the info
JIPipeJavaNodeRegistrationTask - Class in org.hkijena.jipipe.api.registries
Registers a Java algorithm
JIPipeJavaNodeRegistrationTask(String, Class<? extends JIPipeGraphNode>, JIPipeDependency, URL) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeJavaNodeRegistrationTask
Creates a new registration task
JIPipeJavaPlugin - Interface in org.hkijena.jipipe
A Java extension
JIPipeJsonAlgorithmExporterMultiSelectionPanelUI - Class in org.hkijena.jipipe.ui.extensionbuilder
Panel shown when multiple algorithms are selected
JIPipeJsonAlgorithmExporterMultiSelectionPanelUI(JIPipeWorkbench, JIPipeGraphCanvasUI, Set<JIPipeGraphNode>) - Constructor for class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonAlgorithmExporterMultiSelectionPanelUI
 
JIPipeJsonAlgorithmExporterSingleSelectionPanelUI - Class in org.hkijena.jipipe.ui.extensionbuilder
Shown when one algorithm is selected
JIPipeJsonAlgorithmExporterSingleSelectionPanelUI(JIPipeGraphEditorUI, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonAlgorithmExporterSingleSelectionPanelUI
 
JIPipeJsonExporter - Class in org.hkijena.jipipe.ui.extensionbuilder
Exports a JsonNodeInfo
JIPipeJsonExporter(JIPipeProjectWorkbench, NodeGroup) - Constructor for class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExporter
Creates a new UI
JIPipeJsonExtensionContentListUI - Class in org.hkijena.jipipe.ui.extensionbuilder
Lists the content of an JIPipeJsonPlugin
JIPipeJsonExtensionContentListUI(JIPipeJsonExtensionWorkbench) - Constructor for class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExtensionContentListUI
Creates new instance
JIPipeJsonExtensionGraphUI - Class in org.hkijena.jipipe.ui.extensionbuilder
Graph editor UI used within an JIPipeJsonPlugin
JIPipeJsonExtensionGraphUI(JIPipeJsonExtensionWorkbench, JIPipeGraph, UUID) - Constructor for class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExtensionGraphUI
Creates a new instance
JIPipeJsonExtensionInfoUI - Class in org.hkijena.jipipe.ui
UI that shows some introduction
JIPipeJsonExtensionInfoUI(JIPipeJsonExtensionWorkbench) - Constructor for class org.hkijena.jipipe.ui.JIPipeJsonExtensionInfoUI
Creates a new instance
JIPipeJsonExtensionMultiAlgorithmSelectionPanelUI - Class in org.hkijena.jipipe.ui.extensionbuilder
Panel shown when multiple algorithms are selected
JIPipeJsonExtensionMultiAlgorithmSelectionPanelUI(JIPipeJsonExtensionWorkbench, JIPipeGraphCanvasUI, Set<JIPipeGraphNode>) - Constructor for class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExtensionMultiAlgorithmSelectionPanelUI
 
JIPipeJsonExtensionProjectValidation - Class in org.hkijena.jipipe.ui.extensionbuilder
Supplies additional validation only for projects
JIPipeJsonExtensionProjectValidation(JIPipeJsonPlugin) - Constructor for class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExtensionProjectValidation
Creates a new instance
JIPipeJsonExtensionSettingsUI - Class in org.hkijena.jipipe.ui.settings
Panel containing algorithm settings when algorithms are edited in a JIPipeJsonPlugin
JIPipeJsonExtensionSettingsUI(JIPipeJsonExtensionWorkbench) - Constructor for class org.hkijena.jipipe.ui.settings.JIPipeJsonExtensionSettingsUI
 
JIPipeJsonExtensionSingleAlgorithmSelectionPanelUI - Class in org.hkijena.jipipe.ui.extensionbuilder
Shown when one algorithm is selected
JIPipeJsonExtensionSingleAlgorithmSelectionPanelUI(JIPipeGraphEditorUI, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExtensionSingleAlgorithmSelectionPanelUI
 
JIPipeJsonExtensionWindow - Class in org.hkijena.jipipe.ui
Window that displays JIPipeJsonPlugin UIs
JIPipeJsonExtensionWindow(Context, JIPipeJsonPlugin, boolean) - Constructor for class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
Creates a new instance
JIPipeJsonExtensionWorkbench - Class in org.hkijena.jipipe.ui
UI around a JIPipeJsonPlugin
JIPipeJsonExtensionWorkbench(JIPipeJsonExtensionWindow, Context, JIPipeJsonPlugin, boolean) - Constructor for class org.hkijena.jipipe.ui.JIPipeJsonExtensionWorkbench
 
JIPipeJsonExtensionWorkbenchPanel - Class in org.hkijena.jipipe.ui
UI panel that contains references to an JIPipeJsonPlugin UI
JIPipeJsonExtensionWorkbenchPanel(JIPipeJsonExtensionWorkbench) - Constructor for class org.hkijena.jipipe.ui.JIPipeJsonExtensionWorkbenchPanel
 
JIPipeJsonPlugin - Class in org.hkijena.jipipe
A JSON-serializable extension
JIPipeJsonPlugin() - Constructor for class org.hkijena.jipipe.JIPipeJsonPlugin
Creates a new instance
JIPipeJsonPlugin.Deserializer - Class in org.hkijena.jipipe
Deserializer for the JIPipeJsonPlugin.
JIPipeLauncher - Class in org.hkijena.jipipe
 
JIPipeLauncher() - Constructor for class org.hkijena.jipipe.JIPipeLauncher
 
JIPipeLauncher.WindowWatcher - Class in org.hkijena.jipipe
 
JIPipeLocalProjectMemoryCache - Class in org.hkijena.jipipe.api.cache
 
JIPipeLocalProjectMemoryCache(JIPipeProject) - Constructor for class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache
 
JIPipeLogger - Class in org.hkijena.jipipe.extensions.ijtrackmate.utils
 
JIPipeLogger(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.utils.JIPipeLogger
 
JIPipeLogViewer - Class in org.hkijena.jipipe.ui.running
 
JIPipeLogViewer(JIPipeProjectWorkbench) - Constructor for class org.hkijena.jipipe.ui.running.JIPipeLogViewer
 
JIPipeLogViewer.LogEntryRenderer - Class in org.hkijena.jipipe.ui.running
 
JIPipeLogViewLogUI - Class in org.hkijena.jipipe.ui.running
 
JIPipeLogViewLogUI(JIPipeWorkbench, JIPipeRunnableLogEntry) - Constructor for class org.hkijena.jipipe.ui.running.JIPipeLogViewLogUI
 
JIPipeManualParameterAccess - Class in org.hkijena.jipipe.api.parameters
A custom parameter access
JIPipeManualParameterAccess.Builder - Class in org.hkijena.jipipe.api.parameters
JIPipeMenuExtension - Class in org.hkijena.jipipe.ui.extension
An extension for the extension builder or analysis tool menu.
JIPipeMenuExtension(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.ui.extension.JIPipeMenuExtension
Creates a new instance
JIPipeMenuExtensionTarget - Enum in org.hkijena.jipipe.ui.extension
Determines in which menu a menu extension is placed
JIPipeMergedDataSlotTableColumnHeaderRenderer - Class in org.hkijena.jipipe.ui.resultanalysis.renderers
Renders the column header in merged JIPipeDataTableMetadata instances
JIPipeMergedDataSlotTableColumnHeaderRenderer(JIPipeMergedDataTableMetadata) - Constructor for class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeMergedDataSlotTableColumnHeaderRenderer
 
JIPipeMergedDataTableMetadata - Class in org.hkijena.jipipe.api.data.serialization
Merges multiple JIPipeDataTableMetadata
JIPipeMergedDataTableMetadata() - Constructor for class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableMetadata
 
JIPipeMergedResultDataSlotTableUI - Class in org.hkijena.jipipe.ui.resultanalysis
Displays the result of multiple JIPipeDataSlot
JIPipeMergedResultDataSlotTableUI(JIPipeProjectWorkbench, JIPipeProject, Path, List<JIPipeDataSlot>) - Constructor for class org.hkijena.jipipe.ui.resultanalysis.JIPipeMergedResultDataSlotTableUI
 
JIPipeMergeTablesDialogUI - Class in org.hkijena.jipipe.ui.tableeditor
UI that merges tables
JIPipeMergeTablesDialogUI(TableEditor) - Constructor for class org.hkijena.jipipe.ui.tableeditor.JIPipeMergeTablesDialogUI
Creates new instance
JIPipeMergingAlgorithm - Class in org.hkijena.jipipe.api.nodes.algorithm
An JIPipeAlgorithm that applies a similar algorithm to JIPipeIteratingAlgorithm, but does create JIPipeMultiIterationStep instead.
JIPipeMergingAlgorithm(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm
Creates a new instance
JIPipeMergingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm
Creates a new instance
JIPipeMergingAlgorithm(JIPipeMergingAlgorithm) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm
Copies the algorithm
JIPipeMergingAlgorithmIterationStepGenerationSettings - Class in org.hkijena.jipipe.api.nodes.algorithm
 
JIPipeMergingAlgorithmIterationStepGenerationSettings() - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
JIPipeMergingAlgorithmIterationStepGenerationSettings(JIPipeMergingAlgorithmIterationStepGenerationSettings) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
JIPipeMergingAlgorithmIterationStepGenerationSettings(JIPipeIteratingAlgorithmIterationStepGenerationSettings) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
JIPipeMetadata - Class in org.hkijena.jipipe.api
JSON-serializable project metadata
JIPipeMetadata() - Constructor for class org.hkijena.jipipe.api.JIPipeMetadata
Creates new empty instance
JIPipeMetadata(JIPipeMetadata) - Constructor for class org.hkijena.jipipe.api.JIPipeMetadata
Copies metadata
JIPipeMissingDataGeneratorAlgorithm - Class in org.hkijena.jipipe.api.nodes.algorithm
An JIPipeAlgorithm that passes incoming data to their corresponding output slots if the data batch is complete and otherwise runs a generator function that generates missing data items.
JIPipeMissingDataGeneratorAlgorithm(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm
Creates a new instance
JIPipeMissingDataGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm
Creates a new instance
JIPipeMissingDataGeneratorAlgorithm(JIPipeMissingDataGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm
Copies the algorithm
JIPipeMissingDataGeneratorIterationStepGenerationSettings - Class in org.hkijena.jipipe.api.nodes.algorithm
Groups iteration step generation settings
JIPipeMissingDataGeneratorIterationStepGenerationSettings() - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings
 
JIPipeMissingDataGeneratorIterationStepGenerationSettings(JIPipeMissingDataGeneratorIterationStepGenerationSettings) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings
 
JIPipeModernPluginManager - Class in org.hkijena.jipipe.ui.extensions
 
JIPipeModernPluginManager(JIPipeWorkbench, Component, MessagePanel) - Constructor for class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager
 
JIPipeModernPluginManager.UpdateSitesFailedEvent - Class in org.hkijena.jipipe.ui.extensions
 
JIPipeModernPluginManager.UpdateSitesFailedEventEmitter - Class in org.hkijena.jipipe.ui.extensions
 
JIPipeModernPluginManager.UpdateSitesFailedEventListener - Interface in org.hkijena.jipipe.ui.extensions
 
JIPipeModernPluginManager.UpdateSitesReadyEvent - Class in org.hkijena.jipipe.ui.extensions
 
JIPipeModernPluginManager.UpdateSitesReadyEventEmitter - Class in org.hkijena.jipipe.ui.extensions
 
JIPipeModernPluginManager.UpdateSitesReadyEventListener - Interface in org.hkijena.jipipe.ui.extensions
 
JIPipeModernPluginManagerUI - Class in org.hkijena.jipipe.ui.extensions
 
JIPipeModernPluginManagerUI(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManagerUI
 
JIPipeMoveNodesGraphEditorTool - Class in org.hkijena.jipipe.api.grapheditortool
 
JIPipeMoveNodesGraphEditorTool() - Constructor for class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
JIPipeMultiCompartmentSelectionPanelUI - Class in org.hkijena.jipipe.ui.grapheditor.compartments.properties
UI when multiple JIPipeProjectCompartment instances are selected
JIPipeMultiCompartmentSelectionPanelUI(JIPipeProjectWorkbench, Set<JIPipeProjectCompartment>, JIPipeGraphCanvasUI) - Constructor for class org.hkijena.jipipe.ui.grapheditor.compartments.properties.JIPipeMultiCompartmentSelectionPanelUI
 
JIPipeMultiIterationStep - Class in org.hkijena.jipipe.api.nodes.iterationstep
Wraps a set of input and output slots that belong together.
JIPipeMultiIterationStep(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Creates a new interface
JIPipeMultiIterationStep(JIPipeMultiIterationStep) - Constructor for class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Creates a copy
JIPipeMultiIterationStepGenerator - Class in org.hkijena.jipipe.api.nodes.iterationstep
Class that generates a JIPipeMultiIterationStep or JIPipeSingleIterationStep instance.
JIPipeMultiIterationStepGenerator() - Constructor for class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
JIPipeMultiParameterAccess - Class in org.hkijena.jipipe.api.parameters
Writes values into multiple parameter accesses The displayed value is obtained from the first entry
JIPipeMultiParameterAccess(List<JIPipeParameterAccess>) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess
 
JIPipeMutableDataContext - Class in org.hkijena.jipipe.api.data.context
 
JIPipeMutableDataContext() - Constructor for class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext
 
JIPipeMutableDataContext(String) - Constructor for class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext
 
JIPipeMutableDataContext(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext
 
JIPipeMutableDependency - Class in org.hkijena.jipipe
A JSON-serializable JIPipeDependency.
JIPipeMutableDependency() - Constructor for class org.hkijena.jipipe.JIPipeMutableDependency
Creates a new instance
JIPipeMutableDependency(String, String, String) - Constructor for class org.hkijena.jipipe.JIPipeMutableDependency
 
JIPipeMutableDependency(JIPipeDependency) - Constructor for class org.hkijena.jipipe.JIPipeMutableDependency
Copies the dependency
JIPipeMutableIterationContext - Class in org.hkijena.jipipe.api.nodes.iterationstep
 
JIPipeMutableIterationContext() - Constructor for class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMutableIterationContext
 
JIPipeMutableIterationContext(int, int) - Constructor for class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMutableIterationContext
 
JIPipeMutableIterationContext(JIPipeMutableIterationContext) - Constructor for class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMutableIterationContext
 
JIPipeMutableNodeInfo - Class in org.hkijena.jipipe.api.nodes.infos
Instantiates JIPipeGraphNode instances
JIPipeMutableNodeInfo() - Constructor for class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
JIPipeMutableParameterAccess - Class in org.hkijena.jipipe.api.parameters
A mutable implementation of JIPipeParameterAccess The class is partially JSON-serializable (Annotations, for example, are excluded)
JIPipeMutableParameterAccess() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
Creates a new instance
JIPipeMutableParameterAccess(JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
Creates a new independent parameter from the provided access
JIPipeMutableParameterAccess(JIPipeParameterCollection, String, Class<?>) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
Creates a new instance
JIPipeMutableParameterAccess(JIPipeMutableParameterAccess) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
Copies the parameter access
JIPipeMutableParameterAccess.Deserializer - Class in org.hkijena.jipipe.api.parameters
JIPipeMutableSlotConfiguration - Interface in org.hkijena.jipipe.api.data
A slot configuration that can be changed.
JIPipeNamedParameterCollection - Interface in org.hkijena.jipipe.api.parameters
An JIPipeParameterCollection that comes with a predefined name
JIPipeNodeDatabase - Class in org.hkijena.jipipe.api.nodes.database
Allows to query nodes
JIPipeNodeDatabase() - Constructor for class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase
 
JIPipeNodeDatabase(JIPipeProject) - Constructor for class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase
 
JIPipeNodeDatabaseBuilderRun - Class in org.hkijena.jipipe.api.nodes.database
 
JIPipeNodeDatabaseBuilderRun(JIPipeNodeDatabase) - Constructor for class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseBuilderRun
 
JIPipeNodeDatabaseEntry - Interface in org.hkijena.jipipe.api.nodes.database
 
JIPipeNodeDatabaseEntryListCellRenderer - Class in org.hkijena.jipipe.ui.components.renderers
Renderer for JIPipeNodeDatabaseEntry (supports only non-existing nodes fully)
JIPipeNodeDatabaseEntryListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.components.renderers.JIPipeNodeDatabaseEntryListCellRenderer
Creates a new renderer
JIPipeNodeDatabaseRole - Enum in org.hkijena.jipipe.api.nodes.database
 
JIPipeNodeDatabaseUpdater - Class in org.hkijena.jipipe.api.nodes.database
 
JIPipeNodeDatabaseUpdater(JIPipeNodeDatabase) - Constructor for class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseUpdater
 
JIPipeNodeExample - Class in org.hkijena.jipipe.api.nodes
Contains functions around a JIPipeNodeTemplate that stores an example of a node
JIPipeNodeExample(JIPipeNodeTemplate) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeNodeExample
 
JIPipeNodeExampleListCellRenderer - Class in org.hkijena.jipipe.extensions.nodeexamples
Renderer for JIPipeNodeExample
JIPipeNodeExampleListCellRenderer() - Constructor for class org.hkijena.jipipe.extensions.nodeexamples.JIPipeNodeExampleListCellRenderer
Creates a new renderer
JIPipeNodeExamplePickerDialog - Class in org.hkijena.jipipe.extensions.nodeexamples
 
JIPipeNodeExamplePickerDialog(Window) - Constructor for class org.hkijena.jipipe.extensions.nodeexamples.JIPipeNodeExamplePickerDialog
 
JIPipeNodeFinderDialogUI - Class in org.hkijena.jipipe.ui.grapheditor.nodefinder
 
JIPipeNodeFinderDialogUI(JIPipeGraphCanvasUI, JIPipeDataSlot) - Constructor for class org.hkijena.jipipe.ui.grapheditor.nodefinder.JIPipeNodeFinderDialogUI
 
JIPipeNodeFinderDialogUI.ReloadListRun - Class in org.hkijena.jipipe.ui.grapheditor.nodefinder
 
JIPipeNodeGroupUI - Class in org.hkijena.jipipe.ui.grouping
Editor for a NodeGroup Contains a JIPipePipelineGraphEditorUI instance that allows editing the compartment's content
JIPipeNodeGroupUI(JIPipeWorkbench, NodeGroup) - Constructor for class org.hkijena.jipipe.ui.grouping.JIPipeNodeGroupUI
Creates a new editor
JIPipeNodeInfo - Interface in org.hkijena.jipipe.api.nodes
Describes an JIPipeGraphNode
JIPipeNodeInfoListCellRenderer - Class in org.hkijena.jipipe.ui.components.renderers
Renderer for JIPipeNodeInfo
JIPipeNodeInfoListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.components.renderers.JIPipeNodeInfoListCellRenderer
Creates a new renderer
JIPipeNodeInfoOrExamplesListCellRenderer - Class in org.hkijena.jipipe.ui.components.renderers
JIPipeNodeInfoOrExamplesListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.components.renderers.JIPipeNodeInfoOrExamplesListCellRenderer
Creates a new renderer
JIPipeNodeInfoPicker - Class in org.hkijena.jipipe.ui.components.pickers
Panel that allows to pick JIPipeNodeInfo
JIPipeNodeInfoPicker(JIPipeNodeInfoPicker.Mode, Set<JIPipeNodeInfo>) - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker
 
JIPipeNodeInfoPicker.Mode - Enum in org.hkijena.jipipe.ui.components.pickers
The mode of the picker
JIPipeNodeInfoPicker.NodeInfoDeselectedEvent - Class in org.hkijena.jipipe.ui.components.pickers
Generated when a node is deselected
JIPipeNodeInfoPicker.NodeInfoDeselectedEventEmitter - Class in org.hkijena.jipipe.ui.components.pickers
 
JIPipeNodeInfoPicker.NodeInfoDeselectedEventListener - Interface in org.hkijena.jipipe.ui.components.pickers
 
JIPipeNodeInfoPicker.NodeInfoSelectedEvent - Class in org.hkijena.jipipe.ui.components.pickers
Generated when a node is selected
JIPipeNodeInfoPicker.NodeInfoSelectedEventEmitter - Class in org.hkijena.jipipe.ui.components.pickers
 
JIPipeNodeInfoPicker.NodeInfoSelectedEventListener - Interface in org.hkijena.jipipe.ui.components.pickers
 
JIPipeNodeInfoPicker.Renderer - Class in org.hkijena.jipipe.ui.components.pickers
Renders the entries
JIPipeNodeInfoPicker.SelectedInfosChangedEvent - Class in org.hkijena.jipipe.ui.components.pickers
Generated when a node is selected
JIPipeNodeInfoPicker.SelectedInfosChangedEventEmitter - Class in org.hkijena.jipipe.ui.components.pickers
 
JIPipeNodeInfoPicker.SelectedInfosChangedEventListener - Interface in org.hkijena.jipipe.ui.components.pickers
 
JIPipeNodeInfoRef - Class in org.hkijena.jipipe.extensions.parameters.library.references
A parameter that holds a reference to an JIPipeNodeInfo
JIPipeNodeInfoRef(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeNodeInfoRef
 
JIPipeNodeInfoRef(JIPipeNodeInfoRef) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeNodeInfoRef
Creates a copy
JIPipeNodeInfoRef() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeNodeInfoRef
New instance
JIPipeNodeInfoRef.Deserializer - Class in org.hkijena.jipipe.extensions.parameters.library.references
Deserializes the reference from a string
JIPipeNodeInfoRef.Serializer - Class in org.hkijena.jipipe.extensions.parameters.library.references
Serializes the reference as ID
JIPipeNodeInfoRefParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.references
Parameter for JIPipeNodeInfoRef
JIPipeNodeInfoRefParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeNodeInfoRefParameterEditorUI
 
JIPipeNodeMenuLocation - Class in org.hkijena.jipipe.api.nodes
Describes where a node is located in the menu
JIPipeNodeMenuLocation(JIPipeNodeTypeCategory, String, String) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeNodeMenuLocation
 
JIPipeNodeRegistrationTask - Interface in org.hkijena.jipipe.api.registries
A task for algorithm registration that can handle algorithm dependencies
JIPipeNodeRegistry - Class in org.hkijena.jipipe.api.registries
Manages known algorithms and their annotations
JIPipeNodeRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Creates a new registry
JIPipeNodeTableCellRenderer - Class in org.hkijena.jipipe.ui.resultanalysis.renderers
Renders JIPipeGraphNode instances in a table cell
JIPipeNodeTableCellRenderer() - Constructor for class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeNodeTableCellRenderer
Creates a new renderer
JIPipeNodeTemplate - Class in org.hkijena.jipipe.api
Contains the JSON data of a node that can be created by a user for sharing An intermediate between copying a node and a proper plugin.
JIPipeNodeTemplate() - Constructor for class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
JIPipeNodeTemplate(JIPipeNodeTemplate) - Constructor for class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
JIPipeNodeTemplate.List - Class in org.hkijena.jipipe.api
 
JIPipeNodeTemplateListCellRenderer - Class in org.hkijena.jipipe.extensions.nodetemplate
Renderer for JIPipeNodeInfo
JIPipeNodeTemplateListCellRenderer(Set<JIPipeNodeTemplate>) - Constructor for class org.hkijena.jipipe.extensions.nodetemplate.JIPipeNodeTemplateListCellRenderer
Creates a new renderer
JIPipeNodeTemplateParameterEditorUI - Class in org.hkijena.jipipe.extensions.nodetemplate
 
JIPipeNodeTemplateParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.nodetemplate.JIPipeNodeTemplateParameterEditorUI
Creates new instance
JIPipeNodeTypeCategory - Interface in org.hkijena.jipipe.api.nodes
Describes a node category
JIPipeNodeUIAction - Interface in org.hkijena.jipipe.ui.grapheditor.general.actions
 
JIPipeNodeUIActiveArea - Class in org.hkijena.jipipe.ui.grapheditor.general.nodeui
 
JIPipeNodeUIActiveArea(JIPipeGraphNodeUI, int) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUIActiveArea
 
JIPipeNodeUIAddSlotButtonActiveArea - Class in org.hkijena.jipipe.ui.grapheditor.general.nodeui
 
JIPipeNodeUIAddSlotButtonActiveArea(JIPipeGraphNodeUI, JIPipeSlotType) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUIAddSlotButtonActiveArea
 
JIPipeNodeUIRunNodeActiveArea - Class in org.hkijena.jipipe.ui.grapheditor.general.nodeui
 
JIPipeNodeUIRunNodeActiveArea(JIPipeGraphNodeUI) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUIRunNodeActiveArea
 
JIPipeNodeUISlotActiveArea - Class in org.hkijena.jipipe.ui.grapheditor.general.nodeui
Active area that stores the state of a slot
JIPipeNodeUISlotActiveArea(JIPipeGraphNodeUI, JIPipeSlotType, String, JIPipeDataSlot) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
JIPipeNodeUISlotButtonActiveArea - Class in org.hkijena.jipipe.ui.grapheditor.general.nodeui
 
JIPipeNodeUISlotButtonActiveArea(JIPipeGraphNodeUI, JIPipeNodeUISlotActiveArea) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotButtonActiveArea
 
JIPipeNodeUIWholeNodeActiveArea - Class in org.hkijena.jipipe.ui.grapheditor.general.nodeui
 
JIPipeNodeUIWholeNodeActiveArea(JIPipeGraphNodeUI) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUIWholeNodeActiveArea
 
JIPipeNotification - Class in org.hkijena.jipipe.api.notifications
A notification that is shown to the user
JIPipeNotification(String) - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
JIPipeNotification(String, String, String, JIPipeNotificationAction...) - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
JIPipeNotification(JIPipeNotification) - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
JIPipeNotificationAction - Class in org.hkijena.jipipe.api.notifications
 
JIPipeNotificationAction() - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction
 
JIPipeNotificationAction(String, String, Icon, Consumer<JIPipeWorkbench>) - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction
 
JIPipeNotificationAction(String, String, Icon, JIPipeNotificationAction.Style, Consumer<JIPipeWorkbench>) - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction
 
JIPipeNotificationAction.Style - Enum in org.hkijena.jipipe.api.notifications
 
JIPipeNotificationInbox - Class in org.hkijena.jipipe.api.notifications
A list of notifications that has not yet been reviewed
JIPipeNotificationInbox() - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox
 
JIPipeNotificationInbox(JIPipeNotificationInbox) - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox
 
JIPipeNotificationInbox.DismissedEvent - Class in org.hkijena.jipipe.api.notifications
 
JIPipeNotificationInbox.DismissedEventEmitter - Class in org.hkijena.jipipe.api.notifications
 
JIPipeNotificationInbox.DismissedEventListener - Interface in org.hkijena.jipipe.api.notifications
 
JIPipeNotificationInbox.PushedEvent - Class in org.hkijena.jipipe.api.notifications
 
JIPipeNotificationInbox.PushedEventEmitter - Class in org.hkijena.jipipe.api.notifications
 
JIPipeNotificationInbox.PushedEventListener - Interface in org.hkijena.jipipe.api.notifications
 
JIPipeNotificationInbox.UpdatedEvent - Class in org.hkijena.jipipe.api.notifications
Event triggered when an inbox is updated
JIPipeNotificationInbox.UpdatedEventEmitter - Class in org.hkijena.jipipe.api.notifications
 
JIPipeNotificationInbox.UpdatedEventListener - Interface in org.hkijena.jipipe.api.notifications
 
JIPipeOpenTableFromImageJDialogUI - Class in org.hkijena.jipipe.ui.tableeditor
UI that merges tables
JIPipeOpenTableFromImageJDialogUI(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.ui.tableeditor.JIPipeOpenTableFromImageJDialogUI
Creates new instance
JIPipeOutputData - Class in org.hkijena.jipipe.extensions.utils.datatypes
 
JIPipeOutputData(Path) - Constructor for class org.hkijena.jipipe.extensions.utils.datatypes.JIPipeOutputData
Initializes file data from a file
JIPipeOutputData(String) - Constructor for class org.hkijena.jipipe.extensions.utils.datatypes.JIPipeOutputData
 
JIPipeOutputDataSlot - Class in org.hkijena.jipipe.api.data
 
JIPipeOutputDataSlot(JIPipeDataSlotInfo, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.data.JIPipeOutputDataSlot
 
JIPipeOutputDataSlot(JIPipeDataSlot, boolean, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.api.data.JIPipeOutputDataSlot
 
JIPipeParallelizedAlgorithm - Interface in org.hkijena.jipipe.api.nodes
Algorithm that supports parallelization
JIPipeParameter - Annotation Type in org.hkijena.jipipe.api.parameters
Annotates a getter or setter function as parameter.
JIPipeParameterAccess - Interface in org.hkijena.jipipe.api.parameters
Interface around accessing a parameter
JIPipeParameterCollection - Interface in org.hkijena.jipipe.api.parameters
Interfaced for a parameterized object
JIPipeParameterCollection.ParameterChangedEvent - Class in org.hkijena.jipipe.api.parameters
Triggered when a parameter holder's parameters are changed
JIPipeParameterCollection.ParameterChangedEventEmitter - Class in org.hkijena.jipipe.api.parameters
JIPipeParameterCollection.ParameterChangedEventListener - Interface in org.hkijena.jipipe.api.parameters
JIPipeParameterCollection.ParameterStructureChangedEvent - Class in org.hkijena.jipipe.api.parameters
Triggered by an JIPipeParameterCollection if the list of available parameters is changed.
JIPipeParameterCollection.ParameterStructureChangedEventEmitter - Class in org.hkijena.jipipe.api.parameters
JIPipeParameterCollection.ParameterStructureChangedEventListener - Interface in org.hkijena.jipipe.api.parameters
JIPipeParameterCollection.ParameterUIChangedEvent - Class in org.hkijena.jipipe.api.parameters
Triggered by an JIPipeParameterCollection if the parameter UI should be updated
JIPipeParameterCollection.ParameterUIChangedEventEmitter - Class in org.hkijena.jipipe.api.parameters
JIPipeParameterCollection.ParameterUIChangedEventListener - Interface in org.hkijena.jipipe.api.parameters
JIPipeParameterCollectionContextAction - Interface in org.hkijena.jipipe.api.parameters
 
JIPipeParameterCollectionParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.jipipe
 
JIPipeParameterCollectionParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.JIPipeParameterCollectionParameterEditorUI
Creates new instance
JIPipeParameterCollectionVisibilities - Class in org.hkijena.jipipe.api.parameters
Used as parameter to control the visibility of an existing parameter collection
JIPipeParameterCollectionVisibilities() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionVisibilities
Creates new instance
JIPipeParameterCollectionVisibilities(JIPipeParameterCollectionVisibilities) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionVisibilities
Creates a copy
JIPipeParameterCollectionVisibilitiesParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.editors
JIPipeParameterCollectionVisibilitiesParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.editors.JIPipeParameterCollectionVisibilitiesParameterEditorUI
Creates new instance
JIPipeParameterEditorUI - Class in org.hkijena.jipipe.ui.parameters
A UI for a parameter type
JIPipeParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
Creates new instance
JIPipeParameterGenerator - Interface in org.hkijena.jipipe.api.parameters
A class that generates parameters
JIPipeParameterlessSimpleIteratingAlgorithm - Class in org.hkijena.jipipe.api.nodes.algorithm
An JIPipeAlgorithm that iterates through each data row.
JIPipeParameterlessSimpleIteratingAlgorithm(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm
Creates a new instance
JIPipeParameterlessSimpleIteratingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm
Creates a new instance
JIPipeParameterlessSimpleIteratingAlgorithm(JIPipeParameterlessSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm
Copies the algorithm
JIPipeParameterlessSimpleIteratingAlgorithm.IterationStepGenerationSettings - Class in org.hkijena.jipipe.api.nodes.algorithm
 
JIPipeParameterSerializationMode - Enum in org.hkijena.jipipe.api.parameters
Determines how a parameter of JIPipeParameterCollection is serialized
JIPipeParameterSlotAlgorithm - Class in org.hkijena.jipipe.api.nodes.algorithm
An JIPipeAlgorithm that has an optional slot that allows to supply parameter data sets.
JIPipeParameterSlotAlgorithm(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm
 
JIPipeParameterSlotAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm
 
JIPipeParameterSlotAlgorithm(JIPipeParameterSlotAlgorithm) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm
 
JIPipeParameterSlotAlgorithmSettings - Class in org.hkijena.jipipe.api.nodes.algorithm
Groups parameter slot settings
JIPipeParameterSlotAlgorithmSettings() - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings
 
JIPipeParameterSlotAlgorithmSettings(JIPipeParameterSlotAlgorithmSettings) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings
 
JIPipeParameterTree - Class in org.hkijena.jipipe.api.parameters
An JIPipeParameterCollection that contains all the parameters of one or multiple JIPipeParameterCollection instances in a traversed form.
JIPipeParameterTree() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
 
JIPipeParameterTree(JIPipeParameterCollection) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Creates a new instance with a predefined root parameter
JIPipeParameterTree(JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Creates a new dummy tree for a single access
JIPipeParameterTree(JIPipeParameterCollection, int) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Creates a new instance with a predefined root parameter
JIPipeParameterTree.Node - Class in org.hkijena.jipipe.api.parameters
A node
JIPipeParameterTypeInfo - Interface in org.hkijena.jipipe.api.parameters
A type that describes a JIPipe parameter type
JIPipeParameterTypeInfoListCellRenderer - Class in org.hkijena.jipipe.ui.components.renderers
 
JIPipeParameterTypeInfoListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.components.renderers.JIPipeParameterTypeInfoListCellRenderer
 
JIPipeParameterTypeInfoPicker - Class in org.hkijena.jipipe.ui.components.pickers
Panel that allows to pick JIPipeNodeInfo
JIPipeParameterTypeInfoPicker(Window) - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeParameterTypeInfoPicker
 
JIPipeParameterTypeInfoPicker(Window, Set<Class<?>>) - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeParameterTypeInfoPicker
 
JIPipeParameterTypeInfoRef - Class in org.hkijena.jipipe.extensions.parameters.library.references
A parameter that holds a reference to an JIPipeParameterTypeInfo
JIPipeParameterTypeInfoRef(Class<?>) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeParameterTypeInfoRef
 
JIPipeParameterTypeInfoRef(JIPipeParameterTypeInfo) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeParameterTypeInfoRef
 
JIPipeParameterTypeInfoRef(JIPipeParameterTypeInfoRef) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeParameterTypeInfoRef
Creates a copy
JIPipeParameterTypeInfoRef() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeParameterTypeInfoRef
New instance
JIPipeParameterTypeInfoRef.Deserializer - Class in org.hkijena.jipipe.extensions.parameters.library.references
Deserializes the reference from a string
JIPipeParameterTypeInfoRef.Serializer - Class in org.hkijena.jipipe.extensions.parameters.library.references
Serializes the reference as ID
JIPipeParameterTypeInfoRefParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.references
JIPipeParameterTypeInfoRefParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeParameterTypeInfoRefParameterEditorUI
 
JIPipeParameterTypeRegistry - Class in org.hkijena.jipipe.api.registries
Registry for all known parameter types
JIPipeParameterTypeRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry
 
JIPipePercentageProgressInfo - Class in org.hkijena.jipipe.api
A JIPipeProgressInfo that logs the progress of 0 to 100 percent.
JIPipePercentageProgressInfo() - Constructor for class org.hkijena.jipipe.api.JIPipePercentageProgressInfo
 
JIPipePercentageProgressInfo(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.api.JIPipePercentageProgressInfo
 
JIPipePipelineGraphEditorUI - Class in org.hkijena.jipipe.ui.grapheditor.algorithmpipeline
Editor for a project graph compartment
JIPipePipelineGraphEditorUI(JIPipeWorkbench, JIPipeGraph, UUID) - Constructor for class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.JIPipePipelineGraphEditorUI
Creates a project graph compartment editor
JIPipePipelineMultiAlgorithmSelectionPanelUI - Class in org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties
UI when multiple algorithms are selected
JIPipePipelineMultiAlgorithmSelectionPanelUI(JIPipeProjectWorkbench, JIPipeGraphCanvasUI, Set<JIPipeGraphNode>) - Constructor for class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties.JIPipePipelineMultiAlgorithmSelectionPanelUI
 
JIPipePipelineSingleAlgorithmSelectionOverviewPanelUI - Class in org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties
 
JIPipePipelineSingleAlgorithmSelectionOverviewPanelUI(JIPipePipelineSingleAlgorithmSelectionPanelUI) - Constructor for class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties.JIPipePipelineSingleAlgorithmSelectionOverviewPanelUI
 
JIPipePipelineSingleAlgorithmSelectionPanelUI - Class in org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties
UI for a single JIPipeGraphNode
JIPipePipelineSingleAlgorithmSelectionPanelUI(JIPipeGraphEditorUI, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties.JIPipePipelineSingleAlgorithmSelectionPanelUI
 
JIPipePlotAvailableDataManagerUI - Class in org.hkijena.jipipe.ui.plotbuilder
Manages available data sets of a plot builder
JIPipePlotAvailableDataManagerUI(JIPipeWorkbench, PlotEditor) - Constructor for class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotAvailableDataManagerUI
 
JIPipePlotSeriesBuilder - Class in org.hkijena.jipipe.ui.plotbuilder
Constructs a series from a set of columns
JIPipePlotSeriesBuilder(PlotEditor, JIPipeDataInfo) - Constructor for class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesBuilder
Creates a new instance
JIPipePlotSeriesBuilderUI - Class in org.hkijena.jipipe.ui.plotbuilder
JIPipePlotSeriesBuilderUI(JIPipeWorkbench, JIPipePlotSeriesBuilder) - Constructor for class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesBuilderUI
 
JIPipePlotSeriesListEditorUI - Class in org.hkijena.jipipe.ui.plotbuilder
Manages the list of series in a PlotEditor
JIPipePlotSeriesListEditorUI(JIPipeWorkbench, PlotEditor) - Constructor for class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesListEditorUI
Creates a new instance
JIPipePlugin - Interface in org.hkijena.jipipe
Interface shared between all JIPipe extensions
JIPipePluginValidityCheckerPanel - Class in org.hkijena.jipipe.ui.extensions
Panel that checks plugin validity
JIPipePluginValidityCheckerPanel(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.ui.extensions.JIPipePluginValidityCheckerPanel
Creates new instance
JIPipePrepackagedDefaultJavaPlugin - Class in org.hkijena.jipipe.extensions
JIPipeDefaultJavaPlugin for internal usage
JIPipePrepackagedDefaultJavaPlugin() - Constructor for class org.hkijena.jipipe.extensions.JIPipePrepackagedDefaultJavaPlugin
 
JIPipeProgressAdapter - Class in org.hkijena.jipipe.ui.ijupdater
 
JIPipeProgressAdapter(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.ui.ijupdater.JIPipeProgressAdapter
 
JIPipeProgressInfo - Class in org.hkijena.jipipe.api
This object is available inside a JIPipeRunnable and contains methods to report progress, logs, and request cancellation.
JIPipeProgressInfo() - Constructor for class org.hkijena.jipipe.api.JIPipeProgressInfo
 
JIPipeProgressInfo(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.api.JIPipeProgressInfo
 
JIPipeProgressInfo.StatusUpdatedEvent - Class in org.hkijena.jipipe.api
 
JIPipeProgressInfo.StatusUpdatedEventEmitter - Class in org.hkijena.jipipe.api
 
JIPipeProgressInfo.StatusUpdatedEventListener - Interface in org.hkijena.jipipe.api
 
JIPipeProgressInfoOutputStream - Class in org.hkijena.jipipe.api
 
JIPipeProgressInfoOutputStream(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.api.JIPipeProgressInfoOutputStream
 
JIPipeProject - Class in org.hkijena.jipipe.api
A JIPipe project.
JIPipeProject() - Constructor for class org.hkijena.jipipe.api.JIPipeProject
A JIPipe project
JIPipeProject.CompartmentAddedEvent - Class in org.hkijena.jipipe.api
Triggered when a sample is added to an JIPipeProject
JIPipeProject.CompartmentAddedEventEmitter - Class in org.hkijena.jipipe.api
 
JIPipeProject.CompartmentAddedEventListener - Interface in org.hkijena.jipipe.api
 
JIPipeProject.CompartmentRemovedEvent - Class in org.hkijena.jipipe.api
Triggered when a sample is removed from an JIPipeProject
JIPipeProject.CompartmentRemovedEventEmitter - Class in org.hkijena.jipipe.api
 
JIPipeProject.CompartmentRemovedEventListener - Interface in org.hkijena.jipipe.api
 
JIPipeProject.Deserializer - Class in org.hkijena.jipipe.api
Deserializes a project
JIPipeProject.Serializer - Class in org.hkijena.jipipe.api
Serializes a project
JIPipeProjectBackupItem - Class in org.hkijena.jipipe.api.backups
A single backup item
JIPipeProjectBackupItem() - Constructor for class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItem
 
JIPipeProjectBackupItemCollection - Class in org.hkijena.jipipe.api.backups
Collection of backup items that are related to each other
JIPipeProjectBackupItemCollection() - Constructor for class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItemCollection
 
JIPipeProjectBackupSessionInfo - Class in org.hkijena.jipipe.api.backups
Contains basic information about a project backup session The serialized file should be contained within a backup-info.json file in a directory that contains all backup files of that session.
JIPipeProjectBackupSessionInfo() - Constructor for class org.hkijena.jipipe.api.backups.JIPipeProjectBackupSessionInfo
 
JIPipeProjectCompartment - Class in org.hkijena.jipipe.api.compartments.algorithms
A project compartment.
JIPipeProjectCompartment(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
Creates new instance
JIPipeProjectCompartment(JIPipeProjectCompartment) - Constructor for class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
Copies the compartment
JIPipeProjectCompartmentTableCellRenderer - Class in org.hkijena.jipipe.ui.resultanalysis.renderers
Renders an JIPipeProjectCompartment cell
JIPipeProjectCompartmentTableCellRenderer() - Constructor for class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeProjectCompartmentTableCellRenderer
Creates new instance
JIPipeProjectDirectories - Class in org.hkijena.jipipe.api
 
JIPipeProjectDirectories() - Constructor for class org.hkijena.jipipe.api.JIPipeProjectDirectories
 
JIPipeProjectDirectories.DirectoryEntry - Class in org.hkijena.jipipe.api
 
JIPipeProjectDirectoriesVariablesInfo - Class in org.hkijena.jipipe.extensions.expressions
 
JIPipeProjectDirectoriesVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.expressions.JIPipeProjectDirectoriesVariablesInfo
 
JIPipeProjectHistoryJournal - Class in org.hkijena.jipipe.api.history
 
JIPipeProjectHistoryJournal(JIPipeProject) - Constructor for class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal
 
JIPipeProjectHistoryJournal.Snapshot - Class in org.hkijena.jipipe.api.history
Stores all information about the state of a
JIPipeProjectInfoParameters - Class in org.hkijena.jipipe.ui.settings
Additional metadata that provides parameter references for JIPipeProjectOverviewUI
JIPipeProjectInfoParameters() - Constructor for class org.hkijena.jipipe.ui.settings.JIPipeProjectInfoParameters
 
JIPipeProjectMetadata - Class in org.hkijena.jipipe.api
Metadata for a JIPipeProject
JIPipeProjectMetadata() - Constructor for class org.hkijena.jipipe.api.JIPipeProjectMetadata
 
JIPipeProjectOutputTreePanel - Class in org.hkijena.jipipe.ui.components
Displays a tree where the user can select data slots
JIPipeProjectOutputTreePanel(JIPipeProject) - Constructor for class org.hkijena.jipipe.ui.components.JIPipeProjectOutputTreePanel
 
JIPipeProjectOverviewUI - Class in org.hkijena.jipipe.ui.settings
UI that gives an overview of a pipeline (shows parameters, etc.)
JIPipeProjectOverviewUI(JIPipeProjectWorkbench) - Constructor for class org.hkijena.jipipe.ui.settings.JIPipeProjectOverviewUI
Creates a new instance
JIPipeProjectParameterDefinition - Class in org.hkijena.jipipe.extensions.utils.algorithms.meta
 
JIPipeProjectParameterDefinition(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.meta.JIPipeProjectParameterDefinition
 
JIPipeProjectParameterDefinition(DefineParametersTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.meta.JIPipeProjectParameterDefinition
 
JIPipeProjectPermissions - Class in org.hkijena.jipipe.api
 
JIPipeProjectPermissions() - Constructor for class org.hkijena.jipipe.api.JIPipeProjectPermissions
 
JIPipeProjectReportUI - Class in org.hkijena.jipipe.ui
 
JIPipeProjectReportUI(JIPipeProjectWorkbench) - Constructor for class org.hkijena.jipipe.ui.JIPipeProjectReportUI
 
JIPipeProjectReportUI.RebuildReportRun - Class in org.hkijena.jipipe.ui
 
JIPipeProjectReportUI.ReportSettings - Class in org.hkijena.jipipe.ui
 
JIPipeProjectTabMetadata - Class in org.hkijena.jipipe.ui.project
Metadata that allows the restoration of tabs
JIPipeProjectTabMetadata() - Constructor for class org.hkijena.jipipe.ui.project.JIPipeProjectTabMetadata
 
JIPipeProjectTabMetadata(JIPipeProjectWorkbench) - Constructor for class org.hkijena.jipipe.ui.project.JIPipeProjectTabMetadata
 
JIPipeProjectTemplate - Class in org.hkijena.jipipe.api
A reference to a template project
JIPipeProjectTemplate(String, JsonNode, JIPipeProjectMetadata, Path, Path) - Constructor for class org.hkijena.jipipe.api.JIPipeProjectTemplate
 
JIPipeProjectTemplateRegistry - Class in org.hkijena.jipipe.api.registries
 
JIPipeProjectTemplateRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry
 
JIPipeProjectTemplateRegistry.TemplatesUpdatedEvent - Class in org.hkijena.jipipe.api.registries
 
JIPipeProjectTemplateRegistry.TemplatesUpdatedEventEmitter - Class in org.hkijena.jipipe.api.registries
 
JIPipeProjectTemplateRegistry.TemplatesUpdatedEventListener - Interface in org.hkijena.jipipe.api.registries
 
JIPipeProjectWindow - Class in org.hkijena.jipipe.ui
Window that holds an JIPipeProjectWorkbench instance
JIPipeProjectWindow(Context, JIPipeProject, boolean, boolean) - Constructor for class org.hkijena.jipipe.ui.JIPipeProjectWindow
 
JIPipeProjectWorkbench - Class in org.hkijena.jipipe.ui
UI around an JIPipeProject
JIPipeProjectWorkbench(JIPipeProjectWindow, Context, JIPipeProject, boolean, boolean) - Constructor for class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
JIPipeProjectWorkbenchAccess - Interface in org.hkijena.jipipe.ui
Panel that holds a reference to JIPipeProjectWorkbench
JIPipeProjectWorkbenchPanel - Class in org.hkijena.jipipe.ui
JIPipeProjectWorkbenchPanel(JIPipeProjectWorkbench) - Constructor for class org.hkijena.jipipe.ui.JIPipeProjectWorkbenchPanel
 
JIPipePythonAdapterLibraryEnvironment - Class in org.hkijena.jipipe.extensions.python.adapter
Environment that supplies the JIPipe Python adapter library
JIPipePythonAdapterLibraryEnvironment() - Constructor for class org.hkijena.jipipe.extensions.python.adapter.JIPipePythonAdapterLibraryEnvironment
 
JIPipePythonAdapterLibraryEnvironment(PythonPackageLibraryEnvironment) - Constructor for class org.hkijena.jipipe.extensions.python.adapter.JIPipePythonAdapterLibraryEnvironment
 
JIPipePythonAdapterLibraryEnvironment.List - Class in org.hkijena.jipipe.extensions.python.adapter
JIPipePythonAdapterLibraryEnvironmentInstaller - Class in org.hkijena.jipipe.extensions.python.adapter
 
JIPipePythonAdapterLibraryEnvironmentInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.python.adapter.JIPipePythonAdapterLibraryEnvironmentInstaller
 
JIPipePythonAdapterUpdateChecker - Class in org.hkijena.jipipe.extensions.python.adapter
 
JIPipePythonAdapterUpdateChecker() - Constructor for class org.hkijena.jipipe.extensions.python.adapter.JIPipePythonAdapterUpdateChecker
 
JIPipeReadDataStorage - Interface in org.hkijena.jipipe.api.data.storage
JIPipeDataStorage that is used for reading files into a JIPipeData instance.
JIPipeReflectionParameterAccess - Class in org.hkijena.jipipe.api.parameters
JIPipeParameterAccess generated from reflection
JIPipeReflectionParameterAccess() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
JIPipeReflectionParameterCollectionContextAction - Class in org.hkijena.jipipe.api.parameters
 
JIPipeReflectionParameterCollectionContextAction(Object, Method, URL, SetJIPipeDocumentation) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterCollectionContextAction
 
JIPipeRegistryIssues - Class in org.hkijena.jipipe
Class that describes issues with the current registration process
JIPipeRegistryIssues() - Constructor for class org.hkijena.jipipe.JIPipeRegistryIssues
 
JIPipeResourceManager - Class in org.hkijena.jipipe.utils
Simplifies the access to resources for extensions
JIPipeResourceManager(Class<?>, String, String, String, String, String, String, String, String, String, String, String) - Constructor for class org.hkijena.jipipe.utils.JIPipeResourceManager
Creates a new instance
JIPipeResourceManager(Class<?>, String) - Constructor for class org.hkijena.jipipe.utils.JIPipeResourceManager
Creates a new resource manager with the following settings: icons 16x16 path: [basePath]/icons icons 32x32 path: [basePath]/icons-32 dark icons 16x16 path: [basePath]/dark/icons dark icons 32x32 path: [basePath]/dark/icons-32 templates path: [basePath]/templates schemas path: [basePath]/schemas
JIPipeResultAlgorithmTree - Class in org.hkijena.jipipe.ui.resultanalysis
Displays a tree where the user can select data slots
JIPipeResultAlgorithmTree(JIPipeProjectWorkbench, JIPipeProject, Path) - Constructor for class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultAlgorithmTree
 
JIPipeResultCopyFilesByMetadataExporterRun - Class in org.hkijena.jipipe.ui.resultanalysis
 
JIPipeResultCopyFilesByMetadataExporterRun(JIPipeWorkbench, List<JIPipeDataSlot>, boolean) - Constructor for class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun
 
JIPipeResultDataSlotPreview - Class in org.hkijena.jipipe.ui.resultanalysis
Renders a JIPipeDataSlot row as table cell.
JIPipeResultDataSlotPreview(JIPipeProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableMetadataRow, JIPipeExportedDataAnnotation) - Constructor for class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotPreview
Creates a new renderer
JIPipeResultDataSlotRowUI - Class in org.hkijena.jipipe.ui.resultanalysis
A UI that contains various actions for importing/processing output data Please note that the data is not present in the data slot anymore at this point, but instead stored in output files.
JIPipeResultDataSlotRowUI(JIPipeProjectWorkbench, JIPipeDataSlot, JIPipeDataTableMetadataRow) - Constructor for class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotRowUI
 
JIPipeResultDataSlotTableUI - Class in org.hkijena.jipipe.ui.resultanalysis
UI that displays the JIPipeDataTableMetadata of an JIPipeDataSlot
JIPipeResultDataSlotTableUI(JIPipeProjectWorkbench, JIPipeProject, Path, JIPipeDataSlot) - Constructor for class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotTableUI
 
JIPipeResultSlotDataSource - Class in org.hkijena.jipipe.api.data.sources
Data from a slot inside a result folder
JIPipeResultSlotDataSource(JIPipeDataSlot, JIPipeDataTableMetadataRow, Path) - Constructor for class org.hkijena.jipipe.api.data.sources.JIPipeResultSlotDataSource
 
JIPipeResultTreeCellRenderer - Class in org.hkijena.jipipe.ui.resultanalysis.renderers
Renders the tree in JIPipeResultAlgorithmTree
JIPipeResultTreeCellRenderer() - Constructor for class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeResultTreeCellRenderer
Creates new renderer
JIPipeResultUI - Class in org.hkijena.jipipe.ui.resultanalysis
UI around an JIPipeGraphRun result
JIPipeResultUI(JIPipeProjectWorkbench, JIPipeProject, Path) - Constructor for class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultUI
 
JIPipeRewireGraphEditorTool - Class in org.hkijena.jipipe.api.grapheditortool
 
JIPipeRewireGraphEditorTool() - Constructor for class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
JIPipeRowDataAnnotationMergedTableCellRenderer - Class in org.hkijena.jipipe.ui.resultanalysis.renderers
JIPipeRowDataAnnotationMergedTableCellRenderer(JIPipeProjectWorkbench, JIPipeMergedDataTableMetadata, JScrollPane, JTable) - Constructor for class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeRowDataAnnotationMergedTableCellRenderer
 
JIPipeRowDataAnnotationTableCellRenderer - Class in org.hkijena.jipipe.ui.resultanalysis.renderers
Renders row data of an JIPipeDataTableMetadata
JIPipeRowDataAnnotationTableCellRenderer(JIPipeProjectWorkbench, JIPipeDataSlot, JTable, JScrollPane) - Constructor for class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeRowDataAnnotationTableCellRenderer
 
JIPipeRowDataMergedTableCellRenderer - Class in org.hkijena.jipipe.ui.resultanalysis.renderers
JIPipeRowDataMergedTableCellRenderer(JIPipeProjectWorkbench, JIPipeMergedDataTableMetadata, JScrollPane, JTable) - Constructor for class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeRowDataMergedTableCellRenderer
 
JIPipeRowDataTableCellRenderer - Class in org.hkijena.jipipe.ui.resultanalysis.renderers
Renders row data of an JIPipeDataTableMetadata
JIPipeRowDataTableCellRenderer(JIPipeProjectWorkbench, JIPipeDataSlot, JTable, JScrollPane) - Constructor for class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeRowDataTableCellRenderer
 
JIPipeRowIndexTableCellRenderer - Class in org.hkijena.jipipe.ui.resultanalysis.renderers
JIPipeRowIndexTableCellRenderer() - Constructor for class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeRowIndexTableCellRenderer
Creates new renderer
JIPipeRunAlgorithmCommand - Class in org.hkijena.jipipe
Runs a JIPipe algorithm on a single data set.
JIPipeRunAlgorithmCommand() - Constructor for class org.hkijena.jipipe.JIPipeRunAlgorithmCommand
 
JIPipeRunCommand - Class in org.hkijena.jipipe
Command that runs a JIPipe project without GUI
JIPipeRunCommand() - Constructor for class org.hkijena.jipipe.JIPipeRunCommand
 
JIPipeRunCustomAlgorithmCommand - Class in org.hkijena.jipipe
This Command allows to run a specified JIPipeNodeInfo from within ImageJ.
JIPipeRunCustomAlgorithmCommand(String, String) - Constructor for class org.hkijena.jipipe.JIPipeRunCustomAlgorithmCommand
Creates a new instance
JIPipeRunExecuterUI - Class in org.hkijena.jipipe.ui.running
UI that executes an JIPipeRunnable
JIPipeRunExecuterUI(JIPipeWorkbench, JIPipeRunnable) - Constructor for class org.hkijena.jipipe.ui.running.JIPipeRunExecuterUI
 
JIPipeRunExecuterUI(JIPipeWorkbench, JIPipeRunnable, JIPipeRunnerQueue) - Constructor for class org.hkijena.jipipe.ui.running.JIPipeRunExecuterUI
 
JIPipeRunnable - Interface in org.hkijena.jipipe.api
Runnable that can be scheduled, canceled, and reports progress
JIPipeRunnable.EnqeuedEventListener - Interface in org.hkijena.jipipe.api
 
JIPipeRunnable.EnqueuedEvent - Class in org.hkijena.jipipe.api
Generated when an JIPipeRunWorker was enqueued
JIPipeRunnable.EnqueuedEventEmitter - Class in org.hkijena.jipipe.api
 
JIPipeRunnable.FinishedEvent - Class in org.hkijena.jipipe.api
Generated when an JIPipeRunWorker finished its work
JIPipeRunnable.FinishedEventEmitter - Class in org.hkijena.jipipe.api
 
JIPipeRunnable.FinishedEventListener - Interface in org.hkijena.jipipe.api
 
JIPipeRunnable.InterruptedEvent - Class in org.hkijena.jipipe.api
Generated when work of an JIPipeRunWorker is interrupted
JIPipeRunnable.InterruptedEventEmitter - Class in org.hkijena.jipipe.api
 
JIPipeRunnable.InterruptedEventListener - Interface in org.hkijena.jipipe.api
 
JIPipeRunnable.ProgressEvent - Class in org.hkijena.jipipe.api
Generated when an JIPipeRunWorker reports progress
JIPipeRunnable.ProgressEventEmitter - Class in org.hkijena.jipipe.api
 
JIPipeRunnable.ProgressEventListener - Interface in org.hkijena.jipipe.api
 
JIPipeRunnable.StartedEvent - Class in org.hkijena.jipipe.api
Generated when an JIPipeRunWorker was started
JIPipeRunnable.StartedEventEmitter - Class in org.hkijena.jipipe.api
 
JIPipeRunnable.StartedEventListener - Interface in org.hkijena.jipipe.api
 
JIPipeRunnableLogEntry - Class in org.hkijena.jipipe.ui.running
 
JIPipeRunnableLogEntry(String, LocalDateTime, String, JIPipeNotificationInbox, boolean) - Constructor for class org.hkijena.jipipe.ui.running.JIPipeRunnableLogEntry
 
JIPipeRunnableLogsButton - Class in org.hkijena.jipipe.ui.running
 
JIPipeRunnableLogsButton(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsButton
 
JIPipeRunnableLogsCollection - Class in org.hkijena.jipipe.ui.running
 
JIPipeRunnableLogsCollection() - Constructor for class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection
 
JIPipeRunnableLogsCollection.LogClearedEvent - Class in org.hkijena.jipipe.ui.running
 
JIPipeRunnableLogsCollection.LogClearedEventEmitter - Class in org.hkijena.jipipe.ui.running
 
JIPipeRunnableLogsCollection.LogClearedEventListener - Interface in org.hkijena.jipipe.ui.running
 
JIPipeRunnableLogsCollection.LogEntryAddedEvent - Class in org.hkijena.jipipe.ui.running
 
JIPipeRunnableLogsCollection.LogEntryAddedEventEmitter - Class in org.hkijena.jipipe.ui.running
 
JIPipeRunnableLogsCollection.LogEntryAddedEventListener - Interface in org.hkijena.jipipe.ui.running
 
JIPipeRunnableLogsCollection.LogUpdatedEvent - Class in org.hkijena.jipipe.ui.running
 
JIPipeRunnableLogsCollection.LogUpdatedEventEmitter - Class in org.hkijena.jipipe.ui.running
 
JIPipeRunnableLogsCollection.LogUpdatedEventListener - Interface in org.hkijena.jipipe.ui.running
 
JIPipeRunnerQueue - Class in org.hkijena.jipipe.ui.running
Local queue for JIPipeRunnable
JIPipeRunnerQueue(String) - Constructor for class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
 
JIPipeRunnerQueueButton - Class in org.hkijena.jipipe.ui.running
UI that monitors the queue
JIPipeRunnerQueueButton(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
Creates new instance
JIPipeRunnerQueueButton(JIPipeWorkbench, JIPipeRunnerQueue) - Constructor for class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
 
JIPipeRunnerQueueButton.RunMenuItem - Class in org.hkijena.jipipe.ui.running
 
JIPipeRunnerQueueThrobberIcon - Class in org.hkijena.jipipe.ui.components.icons
 
JIPipeRunnerQueueThrobberIcon(Component) - Constructor for class org.hkijena.jipipe.ui.components.icons.JIPipeRunnerQueueThrobberIcon
 
JIPipeRunnerQueueThrobberIcon(Component, JIPipeRunnerQueue) - Constructor for class org.hkijena.jipipe.ui.components.icons.JIPipeRunnerQueueThrobberIcon
 
JIPipeRunQueueNotifier - Class in org.hkijena.jipipe.ui.running
Generates notifications based on the the runner
JIPipeRunQueuePanelUI - Class in org.hkijena.jipipe.ui.running
UI that executes an JIPipeRunnable
JIPipeRunQueuePanelUI() - Constructor for class org.hkijena.jipipe.ui.running.JIPipeRunQueuePanelUI
 
JIPipeRunSettingsUI - Class in org.hkijena.jipipe.ui.running
JIPipeRunSettingsUI(JIPipeProjectWorkbench) - Constructor for class org.hkijena.jipipe.ui.running.JIPipeRunSettingsUI
 
JIPipeRuntimePartition - Class in org.hkijena.jipipe.api.runtimepartitioning
 
JIPipeRuntimePartition() - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
JIPipeRuntimePartition(JIPipeRuntimePartition) - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
JIPipeRuntimePartition.ContinueOnFailureSettings - Class in org.hkijena.jipipe.api.runtimepartitioning
 
JIPipeRuntimePartition.OutputSettings - Class in org.hkijena.jipipe.api.runtimepartitioning
 
JIPipeRuntimePartitionConfiguration - Class in org.hkijena.jipipe.api.runtimepartitioning
 
JIPipeRuntimePartitionConfiguration() - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration
 
JIPipeRuntimePartitionListCellRenderer - Class in org.hkijena.jipipe.ui.settings
 
JIPipeRuntimePartitionListCellRenderer(JIPipeRuntimePartitionConfiguration) - Constructor for class org.hkijena.jipipe.ui.settings.JIPipeRuntimePartitionListCellRenderer
 
JIPipeRuntimePartitionListEditor - Class in org.hkijena.jipipe.ui.settings
 
JIPipeRuntimePartitionListEditor(JIPipeProjectWorkbench) - Constructor for class org.hkijena.jipipe.ui.settings.JIPipeRuntimePartitionListEditor
 
JIPipeRunWorker - Class in org.hkijena.jipipe.ui.running
A worker
JIPipeRunWorker(JIPipeRunnable, boolean) - Constructor for class org.hkijena.jipipe.ui.running.JIPipeRunWorker
 
JIPipeSerializedJsonObjectData - Class in org.hkijena.jipipe.api.data.utils
A base class for JIPipeData that is serialized from/to JSON for convenience Ensure that this data type has a copy constructor for the duplicate() function.
JIPipeSerializedJsonObjectData() - Constructor for class org.hkijena.jipipe.api.data.utils.JIPipeSerializedJsonObjectData
 
JIPipeSerializedJsonObjectData(JIPipeSerializedJsonObjectData) - Constructor for class org.hkijena.jipipe.api.data.utils.JIPipeSerializedJsonObjectData
 
JIPipeSerializedParameterCollectionData - Class in org.hkijena.jipipe.api.data.utils
A base class for JIPipeData that is serialized from/to JSON for convenience Only valid JIPipeParameter definitions are stored.
JIPipeSerializedParameterCollectionData() - Constructor for class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData
 
JIPipeSerializedParameterCollectionData(JIPipeSerializedParameterCollectionData) - Constructor for class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData
 
JIPipeSerializedParameterCollectionData.Deserializer - Class in org.hkijena.jipipe.api.data.utils
 
JIPipeSerializedParameterCollectionData.Serializer - Class in org.hkijena.jipipe.api.data.utils
 
JIPipeService - Interface in org.hkijena.jipipe
Contains all JIPipe resources
JIPipeService.DatatypeRegisteredEvent - Class in org.hkijena.jipipe
Triggered when a new data type is registered
JIPipeService.DatatypeRegisteredEventEmitter - Class in org.hkijena.jipipe
 
JIPipeService.DatatypeRegisteredEventListener - Interface in org.hkijena.jipipe
 
JIPipeService.ExtensionContentAddedEvent - Class in org.hkijena.jipipe
Generated when content is added to an JIPipeJsonPlugin
JIPipeService.ExtensionContentAddedEventEmitter - Class in org.hkijena.jipipe
 
JIPipeService.ExtensionContentAddedEventListener - Interface in org.hkijena.jipipe
 
JIPipeService.ExtensionContentRemovedEvent - Class in org.hkijena.jipipe
Generated when content is removed from an JIPipeJsonPlugin
JIPipeService.ExtensionContentRemovedEventEmitter - Class in org.hkijena.jipipe
 
JIPipeService.ExtensionContentRemovedEventListener - Interface in org.hkijena.jipipe
 
JIPipeService.ExtensionDiscoveredEvent - Class in org.hkijena.jipipe
Triggered when a new extension was discovered
JIPipeService.ExtensionDiscoveredEventEmitter - Class in org.hkijena.jipipe
 
JIPipeService.ExtensionDiscoveredEventListener - Interface in org.hkijena.jipipe
 
JIPipeService.ExtensionRegisteredEvent - Class in org.hkijena.jipipe
Triggered by JIPipeService when an extension is registered
JIPipeService.ExtensionRegisteredEventEmitter - Class in org.hkijena.jipipe
 
JIPipeService.ExtensionRegisteredEventListener - Interface in org.hkijena.jipipe
 
JIPipeService.NodeInfoRegisteredEvent - Class in org.hkijena.jipipe
Triggered when an algorithm is registered
JIPipeService.NodeInfoRegisteredEventEmitter - Class in org.hkijena.jipipe
 
JIPipeService.NodeInfoRegisteredEventListener - Interface in org.hkijena.jipipe
 
JIPipeSettingsRegistry - Class in org.hkijena.jipipe.api.registries
Registry for settings.
JIPipeSettingsRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry
 
JIPipeSettingsRegistry.Sheet - Class in org.hkijena.jipipe.api.registries
A settings sheet
JIPipeSimpleDataBatchTableModel - Class in org.hkijena.jipipe.ui.datatable
A table model that displays data batches
JIPipeSimpleDataBatchTableModel(JTable, List<JIPipeMultiIterationStep>, Class<? extends Store>) - Constructor for class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableModel
 
JIPipeSimpleDataBatchTableUI - Class in org.hkijena.jipipe.ui.datatable
Panel that displays a data batch table
JIPipeSimpleDataBatchTableUI(List<JIPipeMultiIterationStep>) - Constructor for class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableUI
 
JIPipeSimpleIteratingAlgorithm - Class in org.hkijena.jipipe.api.nodes.algorithm
An JIPipeAlgorithm that iterates through each data row.
JIPipeSimpleIteratingAlgorithm(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm
Creates a new instance
JIPipeSimpleIteratingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm
Creates a new instance
JIPipeSimpleIteratingAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm
Copies the algorithm
JIPipeSimpleIteratingAlgorithmIterationStepGenerationSettings - Class in org.hkijena.jipipe.api.nodes.algorithm
 
JIPipeSimpleIteratingAlgorithmIterationStepGenerationSettings() - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithmIterationStepGenerationSettings
 
JIPipeSimpleIteratingAlgorithmIterationStepGenerationSettings(JIPipeSimpleIteratingAlgorithmIterationStepGenerationSettings) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithmIterationStepGenerationSettings
 
JIPipeSingleCompartmentSelectionOverviewPanelUI - Class in org.hkijena.jipipe.ui.grapheditor.compartments.properties
 
JIPipeSingleCompartmentSelectionOverviewPanelUI(JIPipeSingleCompartmentSelectionPanelUI) - Constructor for class org.hkijena.jipipe.ui.grapheditor.compartments.properties.JIPipeSingleCompartmentSelectionOverviewPanelUI
 
JIPipeSingleCompartmentSelectionPanelUI - Class in org.hkijena.jipipe.ui.grapheditor.compartments.properties
UI for a single JIPipeProjectCompartment
JIPipeSingleCompartmentSelectionPanelUI(JIPipeGraphEditorUI, JIPipeProjectCompartment) - Constructor for class org.hkijena.jipipe.ui.grapheditor.compartments.properties.JIPipeSingleCompartmentSelectionPanelUI
 
JIPipeSingleIterationAlgorithm - Class in org.hkijena.jipipe.api.nodes.algorithm
An JIPipeAlgorithm that applies a single iteration with a data batch containing all data.
JIPipeSingleIterationAlgorithm(JIPipeNodeInfo, JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm
Creates a new instance
JIPipeSingleIterationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm
Creates a new instance
JIPipeSingleIterationAlgorithm(JIPipeSingleIterationAlgorithm) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm
Copies the algorithm
JIPipeSingleIterationAlgorithmIterationStepGenerationSettings - Class in org.hkijena.jipipe.api.nodes.algorithm
 
JIPipeSingleIterationAlgorithmIterationStepGenerationSettings() - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithmIterationStepGenerationSettings
 
JIPipeSingleIterationAlgorithmIterationStepGenerationSettings(JIPipeSingleIterationAlgorithmIterationStepGenerationSettings) - Constructor for class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithmIterationStepGenerationSettings
 
JIPipeSingleIterationStep - Class in org.hkijena.jipipe.api.nodes.iterationstep
Wraps a set of input and output slots that belong together This can be used for convenience
JIPipeSingleIterationStep(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Creates a new interface
JIPipeSingleIterationStep(JIPipeSingleIterationStep) - Constructor for class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Creates a copy
JIPipeSlotConfiguration - Interface in org.hkijena.jipipe.api.data
A slot configuration determines which slots an JIPipeGraphNode should have.
JIPipeSlotConfiguration.Serializer - Class in org.hkijena.jipipe.api.data
Serializes the configuration
JIPipeSlotConfiguration.SlotConfigurationChangedEvent - Class in org.hkijena.jipipe.api.data
Triggered when a JIPipeSlotConfiguration was changed
JIPipeSlotConfiguration.SlotConfigurationChangedEventEmitter - Class in org.hkijena.jipipe.api.data
 
JIPipeSlotConfiguration.SlotConfigurationChangedEventListener - Interface in org.hkijena.jipipe.api.data
 
JIPipeSlotEditorUI - Class in org.hkijena.jipipe.ui.grapheditor.general.properties
An extended slot editor that is more powerful than the "in-place" slot editor
JIPipeSlotEditorUI(JIPipeGraphEditorUI, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.properties.JIPipeSlotEditorUI
 
JIPipeSlotType - Enum in org.hkijena.jipipe.api.data
The slot type
JIPipeSummarizeTableColumnsDialogUI - Class in org.hkijena.jipipe.ui.tableeditor
UI for summarizing table columns
JIPipeSummarizeTableColumnsDialogUI(ResultsTableData) - Constructor for class org.hkijena.jipipe.ui.tableeditor.JIPipeSummarizeTableColumnsDialogUI
 
JIPipeTableImporterDialog - Class in org.hkijena.jipipe.ui.tableeditor
Dialog to import a table
JIPipeTableImporterDialog(JIPipeProjectWorkbench) - Constructor for class org.hkijena.jipipe.ui.tableeditor.JIPipeTableImporterDialog
 
JIPipeTemplateSelectionDialog - Class in org.hkijena.jipipe.ui.project
Dialog for selecting templates
JIPipeTemplateSelectionDialog(JIPipeWorkbench, Window) - Constructor for class org.hkijena.jipipe.ui.project.JIPipeTemplateSelectionDialog
 
JIPipeTextAnnotation - Class in org.hkijena.jipipe.api.annotation
A single annotation
JIPipeTextAnnotation() - Constructor for class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
Creates an empty instance
JIPipeTextAnnotation(String, String) - Constructor for class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
Initializes a new instance
JIPipeTextAnnotation(String, Collection<String>) - Constructor for class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
Creates a new instance from an array.
JIPipeTextAnnotation(String, String[]) - Constructor for class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
Creates a new instance from an array.
JIPipeTextAnnotationMatchingMethod - Enum in org.hkijena.jipipe.api.nodes
 
JIPipeTextAnnotationMergeMode - Enum in org.hkijena.jipipe.api.annotation
Determines how annotations are merged
JIPipeTextAnnotationsExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.expressions.variables
Adds the indication that annotations are available
JIPipeTextAnnotationsExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.expressions.variables.JIPipeTextAnnotationsExpressionParameterVariablesInfo
 
JIPipeTextEditor - Class in org.hkijena.jipipe.ui.texteditor
 
JIPipeTextEditor(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.ui.texteditor.JIPipeTextEditor
 
JIPipeTextThumbnailData - Class in org.hkijena.jipipe.api.data.thumbnails
 
JIPipeTextThumbnailData(String) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData
 
JIPipeTextThumbnailData(JIPipeTextThumbnailData) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData
 
JIPipeThumbnailData - Interface in org.hkijena.jipipe.api.data.thumbnails
 
JIPipeThumbnailGenerationQueue - Class in org.hkijena.jipipe.api.data.thumbnails
 
JIPipeThumbnailGenerationQueue() - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue
 
JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEvent - Class in org.hkijena.jipipe.api.data.thumbnails
 
JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEventEmitter - Class in org.hkijena.jipipe.api.data.thumbnails
 
JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEventListener - Interface in org.hkijena.jipipe.api.data.thumbnails
 
JIPipeThumbnailGenerationQueue.ThumbnailGenerationRun - Class in org.hkijena.jipipe.api.data.thumbnails
 
JIPipeToggleableGraphEditorTool - Interface in org.hkijena.jipipe.api.grapheditortool
 
JIPipeUITheme - Enum in org.hkijena.jipipe.ui.theme
 
JIPipeUtilityRegistry - Class in org.hkijena.jipipe.api.registries
A registry of additional utilities (e.g., installers for external environments)
JIPipeUtilityRegistry(JIPipe) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeUtilityRegistry
 
JIPipeValidatable - Interface in org.hkijena.jipipe.api.validation
An interface about a type that reports of the validity of its internal state
JIPipeValidationReport - Class in org.hkijena.jipipe.api.validation
Report about the validity of an object, usually a JIPipeValidatable
JIPipeValidationReport() - Constructor for class org.hkijena.jipipe.api.validation.JIPipeValidationReport
Creates a new report instance
JIPipeValidationReportContext - Class in org.hkijena.jipipe.api.validation
 
JIPipeValidationReportContext() - Constructor for class org.hkijena.jipipe.api.validation.JIPipeValidationReportContext
 
JIPipeValidationReportContext(JIPipeValidationReportContext) - Constructor for class org.hkijena.jipipe.api.validation.JIPipeValidationReportContext
 
JIPipeValidationReportEntry - Class in org.hkijena.jipipe.api.validation
A validity report message
JIPipeValidationReportEntry(JIPipeValidationReportEntryLevel, JIPipeValidationReportContext, String, String, String, String) - Constructor for class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry
 
JIPipeValidationReportEntry(JIPipeValidationReportEntryLevel, JIPipeValidationReportContext, String, String, String) - Constructor for class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry
 
JIPipeValidationReportEntry(JIPipeValidationReportEntryLevel, JIPipeValidationReportContext, String, String) - Constructor for class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry
 
JIPipeValidationReportEntryLevel - Enum in org.hkijena.jipipe.api.validation
 
JIPipeValidationRuntimeException - Exception in org.hkijena.jipipe.api.validation
 
JIPipeValidationRuntimeException(JIPipeValidationReport) - Constructor for exception org.hkijena.jipipe.api.validation.JIPipeValidationRuntimeException
 
JIPipeValidationRuntimeException(JIPipeValidationReportEntry) - Constructor for exception org.hkijena.jipipe.api.validation.JIPipeValidationRuntimeException
 
JIPipeValidationRuntimeException(Throwable, String, String, String) - Constructor for exception org.hkijena.jipipe.api.validation.JIPipeValidationRuntimeException
 
JIPipeValidationRuntimeException(JIPipeValidationReportContext, Throwable, String, String, String) - Constructor for exception org.hkijena.jipipe.api.validation.JIPipeValidationRuntimeException
 
JIPipeValidityReportUI - Class in org.hkijena.jipipe.ui.components
JIPipeValidityReportUI(JIPipeWorkbench, boolean) - Constructor for class org.hkijena.jipipe.ui.components.JIPipeValidityReportUI
 
JIPipeValidityReportUI(JIPipeWorkbench, boolean, MarkdownDocument) - Constructor for class org.hkijena.jipipe.ui.components.JIPipeValidityReportUI
 
JIPipeWeakDataReferenceData - Class in org.hkijena.jipipe.api.data.utils
A helper data type that weakly references other data
JIPipeWeakDataReferenceData(JIPipeData) - Constructor for class org.hkijena.jipipe.api.data.utils.JIPipeWeakDataReferenceData
 
JIPipeWeakDataTableDataSource - Class in org.hkijena.jipipe.api.data.sources
JIPipeWeakDataTableDataSource(JIPipeDataTable, int) - Constructor for class org.hkijena.jipipe.api.data.sources.JIPipeWeakDataTableDataSource
 
JIPipeWeakDataTableDataSource(JIPipeDataTable, int, String) - Constructor for class org.hkijena.jipipe.api.data.sources.JIPipeWeakDataTableDataSource
 
JIPipeWorkbench - Interface in org.hkijena.jipipe.ui
Interface shared by all workbench UIs
JIPipeWorkbenchAccess - Interface in org.hkijena.jipipe.ui
Interface for any class that needs access to a JIPipeWorkbench
JIPipeWorkbenchPanel - Class in org.hkijena.jipipe.ui
A JPanel that implements JIPipeWorkbenchAccess
JIPipeWorkbenchPanel(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.ui.JIPipeWorkbenchPanel
 
JIPipeWriteDataStorage - Interface in org.hkijena.jipipe.api.data.storage
JIPipeDataStorage that is used for writing a JIPipeData.
JIPipeZIPReadDataStorage - Class in org.hkijena.jipipe.api.data.storage
A storage the reads a ZIP file
JIPipeZIPReadDataStorage(JIPipeProgressInfo, Path) - Constructor for class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage
 
JIPipeZIPWriteDataStorage - Class in org.hkijena.jipipe.api.data.storage
A storage that creates a ZIP file
JIPipeZIPWriteDataStorage(JIPipeProgressInfo, Path) - Constructor for class org.hkijena.jipipe.api.data.storage.JIPipeZIPWriteDataStorage
 
JsonAlgorithm - Class in org.hkijena.jipipe.api.grouping
An algorithm that was imported from a Json extension.
JsonAlgorithm(JsonNodeInfo) - Constructor for class org.hkijena.jipipe.api.grouping.JsonAlgorithm
Creates a new instance
JsonAlgorithm(JIPipeGraphWrapperAlgorithm) - Constructor for class org.hkijena.jipipe.api.grouping.JsonAlgorithm
Makes a copy
JsonAlgorithmToGroupNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
JsonAlgorithmToGroupNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.JsonAlgorithmToGroupNodeUIContextAction
 
JsonData - Class in org.hkijena.jipipe.extensions.strings
 
JsonData(String) - Constructor for class org.hkijena.jipipe.extensions.strings.JsonData
 
JsonData(StringData) - Constructor for class org.hkijena.jipipe.extensions.strings.JsonData
 
JsonDeserializable - Interface in org.hkijena.jipipe.utils.json
Allows the object to be deserialized in-place from JSON data
JsonExtensionContentListCellRenderer - Class in org.hkijena.jipipe.ui.extensionbuilder
Renders the contents of a JIPipeJsonPlugin
JsonExtensionContentListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.extensionbuilder.JsonExtensionContentListCellRenderer
Creates a new renderer
JsonExtensionLoaderPlugin - Class in org.hkijena.jipipe.extensions.jsonextensionloader
Extension that loads JIPipeJsonPlugin
JsonExtensionLoaderPlugin() - Constructor for class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionLoaderPlugin
 
JsonExtensionRegistrationTask - Class in org.hkijena.jipipe.extensions.jsonextensionloader
Registers a JIPipeJsonPlugin
JsonExtensionRegistrationTask(JIPipe, Path, JsonNode) - Constructor for class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionRegistrationTask
 
jsonify(String) - Static method in class org.hkijena.jipipe.utils.StringUtils
Removes all spaces, and filesystem-unsafe characters from the string and replaces them with dashes Duplicate dashes are removed
JsonNodeInfo - Class in org.hkijena.jipipe.api.grouping
JsonNodeInfo() - Constructor for class org.hkijena.jipipe.api.grouping.JsonNodeInfo
Creates a new info
JsonNodeInfo(NodeGroup) - Constructor for class org.hkijena.jipipe.api.grouping.JsonNodeInfo
Creates a new info from a NodeGroup
JsonNodeInfoUI - Class in org.hkijena.jipipe.ui.extensionbuilder
UI around a JsonNodeInfo
JsonNodeInfoUI(JIPipeJsonExtensionWorkbench, JsonNodeInfo) - Constructor for class org.hkijena.jipipe.ui.extensionbuilder.JsonNodeInfoUI
 
JsonNodeInfoValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts
 
JsonNodeInfoValidationReportContext(JsonNodeInfo) - Constructor for class org.hkijena.jipipe.api.validation.contexts.JsonNodeInfoValidationReportContext
 
JsonNodeInfoValidationReportContext(JIPipeValidationReportContext, JsonNodeInfo) - Constructor for class org.hkijena.jipipe.api.validation.contexts.JsonNodeInfoValidationReportContext
 
JsonNodeRegistrationTask - Class in org.hkijena.jipipe.api.grouping
Registers a JsonNodeInfo
JsonNodeRegistrationTask(JsonNode, JIPipeJsonPlugin) - Constructor for class org.hkijena.jipipe.api.grouping.JsonNodeRegistrationTask
 
jsonStringToObject(String, Class<T>) - Static method in class org.hkijena.jipipe.utils.SerializationUtils
Deserailizes a JSON string into an object via Jackson
jsonStringToParameterCollection(JIPipeParameterCollection, String) - Static method in class org.hkijena.jipipe.utils.SerializationUtils
Deserializes JSON data into a JIPipeParameterCollection
JsonUtils - Class in org.hkijena.jipipe.utils.json
Global utilities for JSON data
JythonScriptAlgorithm - Class in org.hkijena.jipipe.extensions.python.algorithms
An algorithm that allows to run Python code
JythonScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.python.algorithms.JythonScriptAlgorithm
Creates a new instance
JythonScriptAlgorithm(JythonScriptAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.python.algorithms.JythonScriptAlgorithm
Creates a copy
JythonScriptFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.scripts
 
JythonScriptFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.scripts.JythonScriptFunction
 
JythonUtils - Class in org.hkijena.jipipe.utils.scripting
Utilities for Jython

K

KeepLargestLabelAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
KeepLargestLabelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.KeepLargestLabelAlgorithm
 
KeepLargestLabelAlgorithm(KeepLargestLabelAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.KeepLargestLabelAlgorithm
 
KeepLargestRegionAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary
 
KeepLargestRegionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.KeepLargestRegionAlgorithm
Instantiates a new node type.
KeepLargestRegionAlgorithm(KeepLargestRegionAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.KeepLargestRegionAlgorithm
Instantiates a new node type.
KERNEL_4 - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm
 
KERNEL_4_INV - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm
 
KERNEL_8 - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm
 
KERNEL_8_INV - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm
 
KEY_STROKE_MOVE_SELECTION_DOWN - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
KEY_STROKE_MOVE_SELECTION_LEFT - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
KEY_STROKE_MOVE_SELECTION_RIGHT - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
KEY_STROKE_MOVE_SELECTION_UP - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
KEY_STROKE_REDO - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
KEY_STROKE_UNDO - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
KEY_STROKE_ZOOM_IN - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
KEY_STROKE_ZOOM_OUT - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
KEY_STROKE_ZOOM_RESET - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
KeyDeserializer() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataInfo.KeyDeserializer
 
keyStrokeToString(KeyStroke) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
keyToVariable(String) - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotFeatureVariablesInfo
 
keyToVariable(String) - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackFeatureVariablesInfo
 
KeyValueAveragesGenerator - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics
 
KeyValueAveragesGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator
 
KeyValueAveragesGenerator(KeyValueAveragesGenerator) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator
 
KeyValueHistogramGenerator - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics
 
KeyValueHistogramGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator
 
KeyValueHistogramGenerator(KeyValueHistogramGenerator) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator
 
KeyValueThresholdPartitionAveragesGenerator - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics
 
KeyValueThresholdPartitionAveragesGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
KeyValueThresholdPartitionAveragesGenerator(KeyValueThresholdPartitionAveragesGenerator) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
KeyValueThresholdPartitionGenerator - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics
 
KeyValueThresholdPartitionGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator
 
KeyValueThresholdPartitionGenerator(KeyValueThresholdPartitionGenerator) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator
 
KeyValueThresholdPartitionGenerator.GeneratedColumn - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics
 
KeyValueThresholdStatisticsGenerator - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics
 
KeyValueThresholdStatisticsGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator
 
KeyValueThresholdStatisticsGenerator(KeyValueThresholdStatisticsGenerator) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator
 
killProcessTree(long, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.ProcessUtils
 
KNOWN_UNITS - Static variable in class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 
KNOWN_UNITS_IMAGE_DIMENSIONS - Static variable in class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 

L

l1Norm(List<Double>) - Static method in class org.hkijena.jipipe.utils.VectorUtils
 
l2Norm(List<Double>) - Static method in class org.hkijena.jipipe.utils.VectorUtils
 
LABBlueYellowTrackBackground - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
LABBlueYellowTrackBackground() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.LABBlueYellowTrackBackground
 
LABColorSpace - Class in org.hkijena.jipipe.extensions.imagejdatatypes.colorspace
 
LABColorSpace() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.LABColorSpace
 
LabelAsJIPipeCommonData - Annotation Type in org.hkijena.jipipe.api
Annotates a data type as common/preferred.
LabelAsJIPipeHeavyData - Annotation Type in org.hkijena.jipipe.api
Annotates a JIPipeData type as being "heavy" (large file size).
LabelAsJIPipeHidden - Annotation Type in org.hkijena.jipipe.api
Marks a class as hidden
LabelChamferDistanceMap3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap
 
LabelChamferDistanceMap3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.LabelChamferDistanceMap3DAlgorithm
Instantiates a new node type.
LabelChamferDistanceMap3DAlgorithm(LabelChamferDistanceMap3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.LabelChamferDistanceMap3DAlgorithm
Instantiates a new node type.
LabelColorMapEnumItemInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
EnumItemInfo implementation for ColorMap
LabelColorMapEnumItemInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelColorMapEnumItemInfo
Creates a new instance
LabelColorMapIcon - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
Icon that renders a color map entry
LabelColorMapIcon() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelColorMapIcon
Creates a 16x16 black icon
LabelColorMapIcon(int, int) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelColorMapIcon
Creates a viridis icon
LabelColorMapIcon(int, int, ColorMaps.CommonLabelMaps) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelColorMapIcon
 
LabelFilterSettings() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings
 
LabelFilterSettings(FilterLabelsByOverlapAlgorithm.LabelFilterSettings) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings
 
LabelledImage(ImagePlus, Map<ImageSliceIndex, String>, String) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelledImage
 
LabelOverlapStatisticsVariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
LabelOverlapStatisticsVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelOverlapStatisticsVariablesInfo
 
LabelParameters() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelParameters
 
LabelParameters(MontageCreator.LabelParameters) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelParameters
 
LABELS_IMAGE_OUTPUT_SLOT - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm
 
LabelSettings() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer.LabelSettings
 
LabelSettings(SpotDrawer.LabelSettings) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer.LabelSettings
 
LabelsToMaskAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
LabelsToMaskAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToMaskAlgorithm
 
LabelsToMaskAlgorithm(LabelsToMaskAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToMaskAlgorithm
 
LabelsToRGBAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
LabelsToRGBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToRGBAlgorithm
 
LabelsToRGBAlgorithm(LabelsToRGBAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToRGBAlgorithm
 
LabelsToROIAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
LabelsToROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm
 
LabelsToROIAlgorithm(LabelsToROIAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm
 
LabelsToROIAlgorithm.Method - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
LabelsToROIAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
LABGreenRedTrackBackground - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
LABGreenRedTrackBackground() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.LABGreenRedTrackBackground
 
LABLightnessTrackBackground - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
LABLightnessTrackBackground() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.LABLightnessTrackBackground
 
LABToHSBFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.color
 
LABToHSBFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.color.LABToHSBFunction
 
LABToRGBFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.color
 
LABToRGBFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.color.LABToRGBFunction
 
LambdaSubscriber(BiConsumer<JIPipeEventEmitter<Event, Listener>, Event>, boolean) - Constructor for class org.hkijena.jipipe.api.events.JIPipeEventEmitter.LambdaSubscriber
 
LaplacianEdgeDetectorAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge
Wrapper around ImageProcessor
LaplacianEdgeDetectorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm
Instantiates a new node type.
LaplacianEdgeDetectorAlgorithm(LaplacianEdgeDetectorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm
Instantiates a new node type.
LaplacianEdgeDetectorAlgorithm.Mode - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge
 
LaplacianOfGaussian2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features
Based on code by Dimiter Prodanov ...
LaplacianOfGaussian2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LaplacianOfGaussian2DAlgorithm
Instantiates a new node type.
LaplacianOfGaussian2DAlgorithm(LaplacianOfGaussian2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LaplacianOfGaussian2DAlgorithm
 
LaplacianSharpen2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.sharpen
Wrapper around ImageProcessor
LaplacianSharpen2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.sharpen.LaplacianSharpen2DAlgorithm
Instantiates a new node type.
LaplacianSharpen2DAlgorithm(LaplacianSharpen2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.sharpen.LaplacianSharpen2DAlgorithm
Instantiates a new node type.
LargeButtonAction - Class in org.hkijena.jipipe.ui.components.ribbon
 
LargeButtonAction(String, String, Icon, Runnable) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.LargeButtonAction
 
LargeButtonAction(String, String, Icon, JMenuItem...) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.LargeButtonAction
 
LargeScriptParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.scripts
An editor for ScriptParameter
LargeScriptParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.scripts.LargeScriptParameterEditorUI
Creates new instance
LargeToggleButtonAction - Class in org.hkijena.jipipe.ui.components.ribbon
 
LargeToggleButtonAction(String, String, Icon) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.LargeToggleButtonAction
 
LargeToggleButtonAction(String, String, Icon, boolean, Consumer<JToggleButton>) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.LargeToggleButtonAction
 
lastIndexOf(Object) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
lastIndexOf(Object) - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
LastIndexOfFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
LastIndexOfFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.LastIndexOfFunction
 
launch(CommandLine, Map<String, String>, File) - Method in class org.hkijena.jipipe.utils.ProcessUtils.ExtendedExecutor
 
launchProcess(ProcessEnvironment, JIPipeExpressionVariablesMap, Map<String, String>, boolean, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.ProcessUtils
Runs a process
LEFT_RIGHT - Static variable in class org.hkijena.jipipe.utils.AutoResizeSplitPane
 
LengthFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
LengthFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.LengthFunction
 
lerpColorValue(int, int, double) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils
 
LIGHT_GRAY - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
limitWithEllipsis(String, int, FontMetrics) - Static method in class org.hkijena.jipipe.utils.StringUtils
If the string is longer than maxWidth, limit it to fit within maxWidth with an ellipsis (...).
limitWithoutEllipsis(String, int, FontMetrics) - Static method in class org.hkijena.jipipe.utils.StringUtils
If the string is longer than maxWidth, limit it to fit within maxWidth with an ellipsis (...).
LineCategoryPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
Generates a bar category plot Series table columns: Value (Double), Category (String), Group (String) Multiple series: No
LineCategoryPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.LineCategoryPlotData
Creates a new instance
LineCategoryPlotData(LineCategoryPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.LineCategoryPlotData
Creates a copy
LineEndPoint() - Constructor for class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint
 
LineEndPoint(Scene3DLineGeometry.LineEndPoint) - Constructor for class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint
 
LinesHoughDetection2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
 
LinesHoughDetection2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.LinesHoughDetection2DAlgorithm
 
LinesHoughDetection2DAlgorithm(LinesHoughDetection2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.LinesHoughDetection2DAlgorithm
 
LineStatisticalCategoryPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
Generates a bar category plot Series table columns: Value (Double), Category (String), Group (String) Multiple series: No
LineStatisticalCategoryPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.LineStatisticalCategoryPlotData
Creates a new instance
LineStatisticalCategoryPlotData(LineStatisticalCategoryPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.LineStatisticalCategoryPlotData
Creates a copy
LineXYPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
Generates a bar category plot Series table columns: X (Double), Y (Double) Multiple series: Yes
LineXYPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.LineXYPlotData
Creates a new instance
LineXYPlotData(LineXYPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.LineXYPlotData
Creates a copy
lInfinityNorm(List<Double>) - Static method in class org.hkijena.jipipe.utils.VectorUtils
 
list() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage
 
list() - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage
Lists the relative paths of all elements in this storage
list() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage
 
List() - Constructor for class org.hkijena.jipipe.api.JIPipeAuthorMetadata.List
Creates a new instance
List(JIPipeAuthorMetadata...) - Constructor for class org.hkijena.jipipe.api.JIPipeAuthorMetadata.List
 
List(Collection<JIPipeAuthorMetadata>) - Constructor for class org.hkijena.jipipe.api.JIPipeAuthorMetadata.List
Makes a copy
List() - Constructor for class org.hkijena.jipipe.api.JIPipeNodeTemplate.List
Creates a new instance
List(JIPipeNodeTemplate.List) - Constructor for class org.hkijena.jipipe.api.JIPipeNodeTemplate.List
Creates a copy
List() - Constructor for class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionParameter.List
 
List(Collection<JIPipeExpressionParameter>) - Constructor for class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionParameter.List
 
List() - Constructor for class org.hkijena.jipipe.extensions.expressions.NamedStringQueryExpression.List
 
List(NamedStringQueryExpression.List) - Constructor for class org.hkijena.jipipe.extensions.expressions.NamedStringQueryExpression.List
 
List() - Constructor for class org.hkijena.jipipe.extensions.expressions.NamedTextAnnotationGeneratorExpression.List
 
List(NamedTextAnnotationGeneratorExpression.List) - Constructor for class org.hkijena.jipipe.extensions.expressions.NamedTextAnnotationGeneratorExpression.List
 
List() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeatureFilterParameter.List
 
List(SpotFeatureFilterParameter.List) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeatureFilterParameter.List
 
List() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeaturePenaltyParameter.List
 
List(SpotFeaturePenaltyParameter.List) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeaturePenaltyParameter.List
 
List() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeatureFilterParameter.List
 
List(TrackFeatureFilterParameter.List) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeatureFilterParameter.List
 
List() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.HyperstackDimensionPairParameter.List
 
List(HyperstackDimensionPairParameter.List) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.HyperstackDimensionPairParameter.List
 
List() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.MeasurementColumnSortOrder.List
Creates a new instance
List(MeasurementColumnSortOrder.List) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.MeasurementColumnSortOrder.List
Creates a copy
List() - Constructor for class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment.List
 
List(OMEROCredentialsEnvironment.List) - Constructor for class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment.List
 
List() - Constructor for class org.hkijena.jipipe.extensions.parameters.api.functions.StringPatternExtractionFunction.List
Creates new instance
List(StringPatternExtractionFunction.List) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.functions.StringPatternExtractionFunction.List
Creates a copy
List() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter.List
 
List(PluginCategoriesEnumParameter...) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter.List
 
List(String...) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter.List
 
List(PluginCategoriesEnumParameter.List) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter.List
 
List() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.DoubleAndDoublePairParameter.List
Creates a new instance
List(DoubleAndDoublePairParameter.List) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.DoubleAndDoublePairParameter.List
Creates a copy
List() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.ExpressionAndExpressionPairParameter.List
Creates a new instance
List(ExpressionAndExpressionPairParameter.List) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.ExpressionAndExpressionPairParameter.List
Creates a copy
List() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.IntegerAndIntegerPairParameter.List
Creates a new instance
List(IntegerAndIntegerPairParameter.List) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.IntegerAndIntegerPairParameter.List
Creates a copy
List() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.IntRangeAndIntegerPairParameter.List
Creates a new instance
List(IntRangeAndIntegerPairParameter.List) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.IntRangeAndIntegerPairParameter.List
Creates a copy
List() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.StringAndStringPairParameter.List
Creates a new instance
List(StringAndStringPairParameter.List) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.StringAndStringPairParameter.List
Creates a copy
List() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.StringQueryExpressionAndSortOrderPairParameter.List
Creates a new instance
List(StringQueryExpressionAndSortOrderPairParameter.List) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.StringQueryExpressionAndSortOrderPairParameter.List
Creates a copy
List() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.StringQueryExpressionAndStringPairParameter.List
Creates a new instance
List(StringQueryExpressionAndStringPairParameter.List) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.StringQueryExpressionAndStringPairParameter.List
Creates a copy
List() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.StringQueryExpressionAndStringQueryPairParameter.List
Creates a new instance
List(StringQueryExpressionAndStringQueryPairParameter.List) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.StringQueryExpressionAndStringQueryPairParameter.List
Creates a copy
List() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtraction.List
Creates a new instance
List(StringPatternExtraction.List) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtraction.List
Creates a copy
List() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.StringOrDouble.List
Creates a new instance
List(StringOrDouble.List) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.StringOrDouble.List
Creates a copy
List() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin.List
Creates a new instance
List(FixedMargin.List) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin.List
Creates a copy
List() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.InnerMargin.List
Creates a new instance
List(InnerMargin.List) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.InnerMargin.List
Creates a copy
List() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.Margin.List
Creates a new instance
List(Margin.List) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.Margin.List
Creates a copy
List() - Constructor for class org.hkijena.jipipe.extensions.processes.ProcessEnvironment.List
 
List(ProcessEnvironment.List) - Constructor for class org.hkijena.jipipe.extensions.processes.ProcessEnvironment.List
 
List() - Constructor for class org.hkijena.jipipe.extensions.python.adapter.JIPipePythonAdapterLibraryEnvironment.List
 
List(JIPipePythonAdapterLibraryEnvironment.List) - Constructor for class org.hkijena.jipipe.extensions.python.adapter.JIPipePythonAdapterLibraryEnvironment.List
 
List() - Constructor for class org.hkijena.jipipe.extensions.python.PythonEnvironment.List
 
List(PythonEnvironment.List) - Constructor for class org.hkijena.jipipe.extensions.python.PythonEnvironment.List
 
List() - Constructor for class org.hkijena.jipipe.extensions.r.REnvironment.List
 
List(REnvironment.List) - Constructor for class org.hkijena.jipipe.extensions.r.REnvironment.List
 
List() - Constructor for class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency.List
 
List(JIPipeImageJUpdateSiteDependency.List) - Constructor for class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency.List
 
ListFiles - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Algorithm that lists files in each folder
ListFiles(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ListFiles
Creates new instance
ListFiles(ListFiles) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ListFiles
Copies the algorithm
listIssues() - Method in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
listIterator() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
listIterator(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
listIterator() - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
listIterator(int) - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
listNames() - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage
Lists the names of the elements in this storage
ListParameter<T> - Class in org.hkijena.jipipe.extensions.parameters.api.collections
A parameter that is a collection of another parameter type
ListParameter(Class<T>) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameter
 
ListParameter.Deserializer<T> - Class in org.hkijena.jipipe.extensions.parameters.api.collections
Deserializes the parameter
ListParameter.Serializer - Class in org.hkijena.jipipe.extensions.parameters.api.collections
Serializes the parameter
ListParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.api.collections
Generic parameter for ListParameter
ListParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterEditorUI
Creates new instance
ListParameterItemParameterAccess<T> - Class in org.hkijena.jipipe.extensions.parameters.api.collections
Parameter access for one entry in ListParameter
ListParameterItemParameterAccess(JIPipeParameterAccess, List<T>, Class<T>, int) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterItemParameterAccess
Creates a new instance
ListParameterSettings - Annotation Type in org.hkijena.jipipe.extensions.parameters.api.collections
Settings for a ListParameter or derivative
ListSelectionMode - Enum in org.hkijena.jipipe.utils.ui
Enum wrapper for ListSelectionModel modes
ListSubfolders - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Algorithms that lists the sub folders for each input folder
ListSubfolders(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ListSubfolders
Creates a new instance
ListSubfolders(ListSubfolders) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ListSubfolders
Copies the algorithm
listToPythonArray(Collection<Object>, boolean) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
Converts a collection into a Python array
LnColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a logarithm (base e) function
LnColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.LnColumnOperation
 
load() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
load(Path) - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
Loads settings from the specified file
load(Path) - Method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry
Loads settings from the specified file
load(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageViewerCustomDataLoader
 
load(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.util.ImageJDataSetDataImageViewerCustomLoader
 
load(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedImagePlusDataViewerWindow.CustomDataLoader
The data loading operation.
load(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imp.utils.ImpImageDataImageViewerCustomLoader
 
loadAsProject(JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.JIPipeProjectTemplate
Loads the project
loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.BooleanFormData
 
loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.DoubleFormData
 
loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.EnumFormData
 
loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.FormData
This method is called by the form processor nodes on loading data into this form.
loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.GroupHeaderFormData
 
loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.IntegerFormData
 
loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.StringFormData
 
loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.display.CachedROIList3DDataViewerWindow
 
loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.CachedFilamentsDataViewerWindow
 
loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.algorithms.CachedTrackmateAlgorithmViewerWindow
 
loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.CachedSpotCollectionDataViewerWindow
 
loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.CachedTracksCollectionDataViewerWindow
 
loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.trackscheme.TrackSchemeCachedDataViewerWindow
 
loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.MaskDrawerFormData
 
loadData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.ROIDrawerFormData
 
loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedImagePlusDataViewerWindow
 
loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedROIListDataViewerWindow
 
loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.multiparameters.datatypes.CachedParametersDataViewerWindow
 
loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.plots.CachedPlotViewerWindow
 
loadData(Path) - Method in class org.hkijena.jipipe.extensions.plots.ui.resultanalysis.PlotDataSlotPreview
 
loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.CachedTextViewerWindow
 
loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.display.CachedTableViewerWindow
 
loadData(JIPipeDataItemStore, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
Instruction to load the data from the current data source
loadData(Path) - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeAsyncResultDataSlotPreview
Run in a different thread.
loadDependenciesFromJson(JsonNode) - Static method in class org.hkijena.jipipe.api.JIPipeProject
Deserializes the set of project dependencies from JSON.
loadExample(JIPipeNodeExample) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
Loads an example.
LoadExampleContextMenuAction - Class in org.hkijena.jipipe.extensions.nodeexamples
 
LoadExampleContextMenuAction() - Constructor for class org.hkijena.jipipe.extensions.nodeexamples.LoadExampleContextMenuAction
 
loadFromJson(Path) - Static method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
Loads the table from JSON
loadFromJson(JsonNode, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
loadFromURLs(List<String>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
loadLookAndFeelFromSettings() - Static method in class org.hkijena.jipipe.utils.UIUtils
Attempts to override the look and feel based on the JIPipe settings
loadLUTFromImage() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerLUTEditor
 
loadMetadataFromJson(JsonNode) - Static method in class org.hkijena.jipipe.api.JIPipeProject
Deserializes the project metadata from JSON
loadObjectFromStream(InputStream, String) - Method in class org.hkijena.jipipe.extensions.ij3d.utils.ExtendedObject3DVoxels
Loads the voxels from a stream
loadObjectsFromStream(InputStream, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
Copy of the original loadObjects() method adapted to loading from streams
loadProject(Path, JIPipeValidationReportContext, JIPipeValidationReport) - Static method in class org.hkijena.jipipe.api.JIPipeProject
Loads a project from a file
loadProject(Path, JIPipeValidationReportContext, JIPipeValidationReport, JIPipeNotificationInbox) - Static method in class org.hkijena.jipipe.api.JIPipeProject
Loads a project from a file
loadProject(Path) - Static method in class org.hkijena.jipipe.JIPipe
Loads a project
loadProject(Path, JIPipeNotificationInbox) - Static method in class org.hkijena.jipipe.JIPipe
Loads a project
loadProject(Path, JIPipeValidationReport, JIPipeNotificationInbox) - Static method in class org.hkijena.jipipe.JIPipe
Loads a project
loadProject(Path, JIPipeValidationReport) - Static method in class org.hkijena.jipipe.JIPipe
Loads a project
loadProject(JsonNode) - Static method in class org.hkijena.jipipe.JIPipeJsonPlugin
Loads an extension from JSON
loadProject(Path) - Static method in class org.hkijena.jipipe.JIPipeJsonPlugin
Loads an extension from a file
loadProject(JIPipeJsonPlugin, boolean) - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
Loads a project into the window and replaces the current project
loadProject(JIPipeProject, boolean, boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
Loads a project into the window
LoadResultDirectoryIntoCacheRun - Class in org.hkijena.jipipe.ui.project
 
LoadResultDirectoryIntoCacheRun(JIPipeWorkbench, JIPipeProject, Path, boolean) - Constructor for class org.hkijena.jipipe.ui.project.LoadResultDirectoryIntoCacheRun
 
LoadResultZipIntoCacheRun - Class in org.hkijena.jipipe.ui.project
 
LoadResultZipIntoCacheRun(JIPipeWorkbench, JIPipeProject, Path, boolean) - Constructor for class org.hkijena.jipipe.ui.project.LoadResultZipIntoCacheRun
 
loadRoiListFromFile(Path) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Loads a set of ROI from a zip file
LocalAutoThreshold2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local
Segmenter node that thresholds via an auto threshold Based on code from Auto_Local_Threshold
LocalAutoThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm
 
LocalAutoThreshold2DAlgorithm(LocalAutoThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm
Copies the algorithm
LocalAutoThreshold2DAlgorithm.Method - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local
 
LocalImageCalculator2DExpression - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local
 
LocalImageCalculator2DExpression(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression
 
LocalImageCalculator2DExpression(LocalImageCalculator2DExpression) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression
 
LocalMaxima2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features
Wrapper around MaximumFinder
LocalMaxima2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm
Instantiates a new node type.
LocalMaxima2DAlgorithm(LocalMaxima2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm
Creates a copy
LocalMaxima2DAlgorithm.OutputType - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features
Available output types
LocalMaximumFilter2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local
Wrapper around RankFilters
LocalMaximumFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMaximumFilter2DAlgorithm
Instantiates a new node type.
LocalMaximumFilter2DAlgorithm(LocalMaximumFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMaximumFilter2DAlgorithm
Instantiates a new node type.
LocalMaximumFilter3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local
Wrapper around RankFilters
LocalMaximumFilter3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm
Instantiates a new node type.
LocalMaximumFilter3DAlgorithm(LocalMaximumFilter3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm
Instantiates a new node type.
LocalMeanSpotSegmentation3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.segmentation
 
LocalMeanSpotSegmentation3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm
 
LocalMeanSpotSegmentation3DAlgorithm(LocalMeanSpotSegmentation3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm
 
LocalMinimumFilter2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local
Wrapper around RankFilters
LocalMinimumFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMinimumFilter2DAlgorithm
Instantiates a new node type.
LocalMinimumFilter2DAlgorithm(LocalMinimumFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMinimumFilter2DAlgorithm
Instantiates a new node type.
LocalMinimumFilter3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local
Wrapper around RankFilters
LocalMinimumFilter3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm
Instantiates a new node type.
LocalMinimumFilter3DAlgorithm(LocalMinimumFilter3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm
Instantiates a new node type.
LocalPixelCoordinate5DExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
Variable source that allows to address x, y
LocalPixelCoordinate5DExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.LocalPixelCoordinate5DExpressionParameterVariablesInfo
 
LocalVarianceFilter2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local
Wrapper around RankFilters
LocalVarianceFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalVarianceFilter2DAlgorithm
Instantiates a new node type.
LocalVarianceFilter2DAlgorithm(LocalVarianceFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalVarianceFilter2DAlgorithm
Instantiates a new node type.
LocalVarianceFilter3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local
Wrapper around RankFilters
LocalVarianceFilter3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm
Instantiates a new node type.
LocalVarianceFilter3DAlgorithm(LocalVarianceFilter3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm
Instantiates a new node type.
LOCATION_KEY_NODE_DISPLAY_NAME - Static variable in class org.hkijena.jipipe.api.data.JIPipeDataSlot
To be used with getLocation().
LOCATION_KEY_NODE_NAME - Static variable in class org.hkijena.jipipe.api.data.JIPipeDataSlot
To be used with getLocation().
LOCATION_KEY_SLOT_DISPLAY_NAME - Static variable in class org.hkijena.jipipe.api.data.JIPipeDataSlot
To be used with getLocation().
LOCATION_KEY_SLOT_IO - Static variable in class org.hkijena.jipipe.api.data.JIPipeDataSlot
To be used with getLocation().
LOCATION_KEY_SLOT_NAME - Static variable in class org.hkijena.jipipe.api.data.JIPipeDataSlot
To be used with getLocation().
LockNodeLocationSizeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
LockNodeLocationSizeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.LockNodeLocationSizeUIContextAction
 
log(String) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
Writes a message into the log
log(String, Color) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.JIPipeLogger
 
Log10ColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a logarithm (base 10) function
Log10ColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.Log10ColumnOperation
 
LogClearedEvent(JIPipeRunnableLogsCollection) - Constructor for class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection.LogClearedEvent
 
LogClearedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection.LogClearedEventEmitter
 
LogEntryAddedEvent(JIPipeRunnableLogsCollection, JIPipeRunnableLogEntry) - Constructor for class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection.LogEntryAddedEvent
 
LogEntryAddedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection.LogEntryAddedEventEmitter
 
LogEntryRenderer() - Constructor for class org.hkijena.jipipe.ui.running.JIPipeLogViewer.LogEntryRenderer
 
logicalAnd() - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
logicalAnd() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Applies a logical AND operation to all Roi in this list.
LogicalAndOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
LogicalAndOperator(String, int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.LogicalAndOperator
 
LogicalNotOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
LogicalNotOperator(String, int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.LogicalNotOperator
 
LogicalOperation - Enum in org.hkijena.jipipe.extensions.parameters.library.util
Available operations
logicalOr() - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
logicalOr() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Applies a logical OR operation to all Roi in this list.
LogicalOrOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
LogicalOrOperator(String, int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.LogicalOrOperator
 
logicalXor() - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
logicalXor() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Applies a logical XOR operation on the list of Roi.
LogicalXOrOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
LogicalXOrOperator(String, int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.LogicalXOrOperator
 
logPercentage(double, double) - Method in class org.hkijena.jipipe.api.JIPipePercentageProgressInfo
 
LogUpdatedEvent(JIPipeRunnableLogsCollection) - Constructor for class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection.LogUpdatedEvent
 
LogUpdatedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection.LogUpdatedEventEmitter
 
LongArrayParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays
 
LongArrayParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.LongArrayParameterImageJ2ModuleInput
 
LongConstantValueImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant
 
LongConstantValueImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.LongConstantValueImageJ2OutOfBoundsFactoryData
 
LongConstantValueImageJ2OutOfBoundsFactoryData(OutOfBoundsConstantValueFactory<?, ?>) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.LongConstantValueImageJ2OutOfBoundsFactoryData
 
LongConstantValueImageJ2OutOfBoundsFactoryData(LongConstantValueImageJ2OutOfBoundsFactoryData) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.LongConstantValueImageJ2OutOfBoundsFactoryData
 
LongList - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.list
A list of Long
LongList() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.list.LongList
Creates a new empty list
LongList(LongList) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.list.LongList
Creates a copy
LongParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives
 
LongParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.LongParameterImageJ2ModuleInput
 
LongParameterImageJ2ModuleOutput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives
 
LongParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.LongParameterImageJ2ModuleOutput
 
LongParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Info for Long
LongParameterTypeInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.LongParameterTypeInfo
 
LongPrimitiveParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Info for Long
LongPrimitiveParameterTypeInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.LongPrimitiveParameterTypeInfo
 
LoopEndNode - Class in org.hkijena.jipipe.api.looping
Deprecated.
LoopEndNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.looping.LoopEndNode
Deprecated.
 
LoopEndNode(LoopEndNode) - Constructor for class org.hkijena.jipipe.api.looping.LoopEndNode
Deprecated.
 
LoopGroup - Class in org.hkijena.jipipe.api.looping
Encapsulates a set of nodes that are in a loop
LoopGroup(JIPipeGraph) - Constructor for class org.hkijena.jipipe.api.looping.LoopGroup
 
LoopingPlugin - Class in org.hkijena.jipipe.api.looping
Extension for anything that is related to JIPipeGraphWrapperAlgorithm
LoopingPlugin() - Constructor for class org.hkijena.jipipe.api.looping.LoopingPlugin
 
LoopStartNode - Class in org.hkijena.jipipe.api.looping
Deprecated.
LoopStartNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.looping.LoopStartNode
Deprecated.
 
LoopStartNode(LoopStartNode) - Constructor for class org.hkijena.jipipe.api.looping.LoopStartNode
Deprecated.
 
lostOwnership(Clipboard, Transferable) - Method in class org.hkijena.jipipe.utils.ui.CopyImageToClipboard
 
lowerSelection(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
LowerUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
LowerUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.LowerUIContextAction
 
LSP_IMAGE_OUTPUT_SLOT - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm
 
LUTData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes
 
LUTData() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.LUTData
 
LUTData(LUTData) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.LUTData
 
lutFromImage(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an image into a LUT.
LUTInverterAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut
 
LUTInverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.LUTInverterAlgorithm
 
LUTInverterAlgorithm(LUTInverterAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.LUTInverterAlgorithm
 
LUTManagerPlugin2D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d
 
LUTManagerPlugin2D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.LUTManagerPlugin2D
 
LUTManagerPlugin3D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins3d
 
LUTManagerPlugin3D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins3d.LUTManagerPlugin3D
 
lutToImage(LUT, int, int) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts a LUT into an RGB image
LUTToImageTypeConverter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms
 
LUTToImageTypeConverter() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.LUTToImageTypeConverter
 

M

MacroFlag - Class in org.hkijena.jipipe.utils.scripting
Helper for optional macro flags
MacroFlag(String, boolean) - Constructor for class org.hkijena.jipipe.utils.scripting.MacroFlag
 
MacroSetting - Class in org.hkijena.jipipe.utils.scripting
Helper class for ImageJ macro parameters
MacroSetting(String, Object) - Constructor for class org.hkijena.jipipe.utils.scripting.MacroSetting
 
MacroUtils - Class in org.hkijena.jipipe.utils.scripting
Utility functions for macros
MacroWrapperAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes
An algorithm that wraps around an ImageJ macro
MacroWrapperAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.MacroWrapperAlgorithm
 
MacroWrapperAlgorithm(MacroWrapperAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.MacroWrapperAlgorithm
Copies the algorithm
main(String[]) - Static method in class org.hkijena.jipipe.extensions.clij2.GenerateDocumentationUtil
 
main(String...) - Static method in class org.hkijena.jipipe.JIPipeCLI
 
main(String...) - Static method in class org.hkijena.jipipe.JIPipeGUICommand
 
main(String...) - Static method in class org.hkijena.jipipe.JIPipeLauncher
 
main(String[]) - Static method in class org.hkijena.jipipe.JIPipeRunAlgorithmCommand
 
main(String[]) - Static method in class org.hkijena.jipipe.SingleAlgorithmDebug
 
main(String[]) - Static method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
main(String[]) - Static method in class org.hkijena.jipipe.ui.components.icons.NewThrobberIcon
 
main(String[]) - Static method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon
 
main(String[]) - Static method in class org.hkijena.jipipe.ui.components.SplashScreen
 
main(String[]) - Static method in class org.hkijena.jipipe.ui.tableeditor.TableEditor
 
main(String[]) - Static method in class org.hkijena.jipipe.utils.ArchiveUtils
 
main(String[]) - Static method in class org.hkijena.jipipe.utils.NaturalOrderComparator
 
makeBorderlessReadonlyTextPane(String, boolean) - Static method in class org.hkijena.jipipe.utils.UIUtils
Creates a readonly text pane (that can do HTML)
makeBorderlessWithoutMargin(AbstractButton) - Static method in class org.hkijena.jipipe.utils.UIUtils
Makes a component borderless
makeExternalScriptFileRelative(Path) - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameter
Converts the external script file reference into a relative path
makeFilesystemCompatible(String) - Static method in class org.hkijena.jipipe.utils.StringUtils
Replaces all characters invalid for filesystems with spaces Assumes that the string is a filename, so path operators are not allowed.
makeFlat() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
 
makeFlat(AbstractButton) - Static method in class org.hkijena.jipipe.utils.UIUtils
Makes a button flat and have a height of 25px
makeFlat25x25(AbstractButton) - Static method in class org.hkijena.jipipe.utils.UIUtils
Makes a button flat and 25x25 size
makeHighlightedSuccess(JButton) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
makeInput() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder
 
makeMacroCompatible(String) - Static method in class org.hkijena.jipipe.utils.scripting.MacroUtils
Makes a string macro-compatible
makeMarkdownReader(MarkdownDocument, String[]) - Static method in class org.hkijena.jipipe.utils.UIUtils
Creates a JTextPane that displays Markdown content
makeMontage2(List<ImagePlus>, List<String>, int, int, double, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
Creates a montage and returns it as an ImagePlus.
makeMontage2(ImagePlus, int, int, double, int, int, int, int, boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
Creates a montage and returns it as an ImagePlus.
makeOutput() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder
 
makeReadonlyBorderlessTextArea(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Creates a readonly text area
makeReadonlyBorderlessTextField(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Creates a readonly text field
makeReadonlyTextArea(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Creates a readonly text area Cannot do HTML.
makeReadonlyTextField(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Creates a readonly text field
makeReadonlyTextPane(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Creates a readonly text pane (that can do HTML)
makeToggleReadonly(JToggleButton) - Static method in class org.hkijena.jipipe.utils.UIUtils
Makes a toggle button readonly without greying it out
makeUnique() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
Makes the stored image unique by duplicating it.
makeUniqueString(String, String, Collection<String>) - Static method in class org.hkijena.jipipe.utils.StringUtils
Makes an unique string by adding a counting variable to its end if it already exists
makeUniqueString(String, String, Predicate<String>) - Static method in class org.hkijena.jipipe.utils.StringUtils
Makes an unique string by adding a counting variable to its end if it already exists
makeUnixExecutable(Path) - Static method in class org.hkijena.jipipe.utils.PathUtils
Makes a file/directory executable Does nothing if the OS is Windows
makeURLLabel(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Makes a label that contains a URL and opens the URL when clicked
ManagerUI - Class in org.hkijena.jipipe.ui.ijupdater
 
ManagerUI(JIPipeWorkbench, JIPipeImageJPluginManager) - Constructor for class org.hkijena.jipipe.ui.ijupdater.ManagerUI
 
ManualHSBThreshold2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color
 
ManualHSBThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
ManualHSBThreshold2DAlgorithm(ManualHSBThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
ManualLABThreshold2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color
 
ManualLABThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
ManualLABThreshold2DAlgorithm(ManualLABThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
ManualRGBThreshold2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color
 
ManualRGBThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
ManualRGBThreshold2DAlgorithm(ManualRGBThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
ManualThreshold16U2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
Wrapper around ImageProcessor
ManualThreshold16U2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm
Instantiates a new node type.
ManualThreshold16U2DAlgorithm(ManualThreshold16U2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm
Instantiates a new node type.
ManualThreshold32F2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
Wrapper around ImageProcessor
ManualThreshold32F2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm
Instantiates a new node type.
ManualThreshold32F2DAlgorithm(ManualThreshold32F2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm
Instantiates a new node type.
ManualThreshold8U2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
Wrapper around ImageProcessor
ManualThreshold8U2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm
Instantiates a new node type.
ManualThreshold8U2DAlgorithm(ManualThreshold8U2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm
Instantiates a new node type.
mapToAnnotationList(Map<String, String>) - Static method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
Converts an annotation map to a list
mapToCollection(Class<T>) - Method in class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionList
Maps the items to a JIPipeParameterCollection type.
mapToPythonArguments(Map<String, Object>) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
Converts a dictionary into a set of Python function arguments
mapToPythonDict(Map<String, Object>) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
Converts a dictionary into a set of Python function arguments
MarchingCubes - Class in org.hkijena.jipipe.extensions.scene3d.utils
Adapted from PrimozLavric
MarchingCubes() - Constructor for class org.hkijena.jipipe.extensions.scene3d.utils.MarchingCubes
 
marchingCubes(ImagePlus, int, int, double, int, boolean, boolean, Quantity.LengthUnit) - Static method in class org.hkijena.jipipe.extensions.scene3d.utils.MarchingCubes
 
marchingCubesByte(byte[], int[], int, float[], char, int) - Static method in class org.hkijena.jipipe.extensions.scene3d.utils.MarchingCubes
 
marchingCubesDouble(double[], int[], int, float[], double, int) - Static method in class org.hkijena.jipipe.extensions.scene3d.utils.MarchingCubes
 
marchingCubesFloat(float[], int[], int, float[], float, int) - Static method in class org.hkijena.jipipe.extensions.scene3d.utils.MarchingCubes
 
marchingCubesInt(int[], int[], int, float[], int, int) - Static method in class org.hkijena.jipipe.extensions.scene3d.utils.MarchingCubes
 
marchingCubesShort(short[], int[], int, float[], short, int) - Static method in class org.hkijena.jipipe.extensions.scene3d.utils.MarchingCubes
 
Margin - Class in org.hkijena.jipipe.extensions.parameters.library.roi
Parameter that allows users to define a rectangle ROI.
Margin() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
Creates a new instance
Margin(Rectangle) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
Creates a margin from a rectangle
Margin(Margin) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
Creates a copy
Margin(Anchor) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
Margin.List - Class in org.hkijena.jipipe.extensions.parameters.library.roi
List parameter of Margin
MarginParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.roi
Editor for Margin
MarginParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.MarginParameterEditorUI
 
markAllAsRead() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection
 
markAsRead(JIPipeRunnableLogEntry) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection
 
MarkdownDocument - Class in org.hkijena.jipipe.ui.components.markdown
Contains Markdown data
MarkdownDocument() - Constructor for class org.hkijena.jipipe.ui.components.markdown.MarkdownDocument
 
MarkdownDocument(String) - Constructor for class org.hkijena.jipipe.ui.components.markdown.MarkdownDocument
 
MarkdownReader - Class in org.hkijena.jipipe.ui.components.markdown
Panel that allows reading of Markdown data
MarkdownReader() - Constructor for class org.hkijena.jipipe.ui.components.markdown.MarkdownReader
 
MarkdownReader(boolean) - Constructor for class org.hkijena.jipipe.ui.components.markdown.MarkdownReader
 
MarkdownReader(boolean, MarkdownDocument) - Constructor for class org.hkijena.jipipe.ui.components.markdown.MarkdownReader
 
MarkdownReader(boolean, MarkdownDocument, List<String>, List<String>) - Constructor for class org.hkijena.jipipe.ui.components.markdown.MarkdownReader
 
MaskChangedEvent(MaskDrawerPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D.MaskChangedEvent
 
MaskChangedEventEmitter() - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D.MaskChangedEventEmitter
 
MaskDrawer2DTool - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer
Super class for any tool that can be used in MaskDrawerPlugin2D
MaskDrawer2DTool(MaskDrawerPlugin2D, String, String, Icon) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawer2DTool
 
MaskDrawerFormData - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms
Structural FormData for drawing masks
MaskDrawerFormData(List<JIPipeMultiIterationStep>, DrawMaskAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.MaskDrawerFormData
 
MaskDrawerPlugin2D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer
 
MaskDrawerPlugin2D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
MaskDrawerPlugin2D.MaskChangedEvent - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer
 
MaskDrawerPlugin2D.MaskChangedEventEmitter - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer
 
MaskDrawerPlugin2D.MaskChangedEventListener - Interface in org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer
 
MaskDrawerPlugin2D.MaskColor - Enum in org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer
 
MaskTo3DMeshAlgorithm - Class in org.hkijena.jipipe.extensions.scene3d.nodes
 
MaskTo3DMeshAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.scene3d.nodes.MaskTo3DMeshAlgorithm
 
MaskTo3DMeshAlgorithm(MaskTo3DMeshAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.scene3d.nodes.MaskTo3DMeshAlgorithm
 
maskToBufferedImage(ImageProcessor, BufferedImage, Color, Color) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Copies a mask into a BufferedImage
MaskToRoiAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate
 
MaskToRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.MaskToRoiAlgorithm
 
MaskToRoiAlgorithm(MaskToRoiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.MaskToRoiAlgorithm
 
MaskToROIDrawerPlugin2D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer
Mask drawer with function to add ROIs to the ROI manager
MaskToROIDrawerPlugin2D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskToROIDrawerPlugin2D
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.extensions.nodeexamples.LoadExampleContextMenuAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.extensions.nodetemplate.AddTemplateContextMenuAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.extensions.utils.contextmenu.ParameterExplorerContextMenuAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphCopyNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphDuplicateNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphPasteNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentCopyNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentPasteNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddBookmarkNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddNewCompartmentUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddNewNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ClearCacheNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.CollapseIOInterfaceNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DeleteCompartmentUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DeleteNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisablePassThroughNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableSaveOutputsNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableVirtualOutputNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnablePassThroughNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableSaveOutputsNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableVirtualOutputsNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ExportCompartmentAsJsonNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ExportCompartmentToNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ExportNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.GroupNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.InvertSelectionNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.IsolateNodesUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.JsonAlgorithmToGroupNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.LockNodeLocationSizeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.LowerUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIDownContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUILeftContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIRightContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIUpContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeContextActionWrapperUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in interface org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeUIContextAction
Returns if the action shows up
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.OpenCacheBrowserInWindowUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RaiseUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RemoveBookmarkNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RunAndShowIntermediateResultsNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RunAndShowResultsNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SelectAllNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SelectAndMoveNodeHereNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SendToBackgroundUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SendToForegroundUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SetNodeHotkeyContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UnlockNodeLocationSizeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheOnlyPredecessorsNodeUIContextAction
 
matches(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheShowIntermediateNodeUIContextAction
 
Matrix2D<T> - Class in org.hkijena.jipipe.extensions.parameters.api.matrix
A 2D matrix of floats
Matrix2D(Class<T>) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
Creates a new instance
Matrix2D(Matrix2D<T>) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
Creates a copy
Matrix2D.Deserializer<T> - Class in org.hkijena.jipipe.extensions.parameters.api.matrix
Deserializes the parameter
Matrix2D.Serializer - Class in org.hkijena.jipipe.extensions.parameters.api.matrix
Serializes the parameter
Matrix2DFloat - Class in org.hkijena.jipipe.extensions.parameters.library.matrix
Matrix containing Float
Matrix2DFloat() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.matrix.Matrix2DFloat
Creates a new object
Matrix2DFloat(Matrix2DFloat) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.matrix.Matrix2DFloat
Creates a copy
Matrix2DParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.api.matrix
Editor for Matrix2D
Matrix2DParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2DParameterEditorUI
Creates new instance
MatrixToImageAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert
 
MatrixToImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.MatrixToImageAlgorithm
 
MatrixToImageAlgorithm(MatrixToImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.MatrixToImageAlgorithm
 
max - Variable in class org.hkijena.jipipe.utils.PointRange
 
maybeAddSeparator() - Method in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
Mean(ImageProcessor, int, int, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm
 
measure(ImageHandler, int, boolean, String, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
measure(ImagePlus, ImageStatisticsSetParameter, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Generates ROI statistics
MeasureBranchesNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks
 
MeasureBranchesNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.MeasureBranchesNode
 
MeasureBranchesNode(MeasureBranchesNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.MeasureBranchesNode
 
measureComponent(ResultsTableData, String, Set<FilamentVertex>) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
measureComponents() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
measureCurrentMask() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MeasurementDrawerPlugin2D
 
measureEdge(FilamentEdge, Map<String, Object>, String, String) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
Measures an edge
measureEdges() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
MeasureEdgesAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.measure
 
MeasureEdgesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.measure.MeasureEdgesAlgorithm
 
MeasureEdgesAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.measure.MeasureEdgesAlgorithm
 
MeasureEdgesNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks
 
MeasureEdgesNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.MeasureEdgesNode
 
MeasureEdgesNode(MeasureEdgesNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.MeasureEdgesNode
 
MeasureFilamentsAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.measure
 
MeasureFilamentsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.measure.MeasureFilamentsAlgorithm
 
MeasureFilamentsAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.measure.MeasureFilamentsAlgorithm
 
measureLabels(ImageProcessor, ImageProcessor, ImageStatisticsSetParameter, ImageSliceIndex, Calibration, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.ImageJAlgorithmUtils
Measures properties of a label image
Measurement - Enum in org.hkijena.jipipe.extensions.imagejdatatypes.util.measure
Measurements defined by Measurements.
Measurement2DSettings - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager
 
Measurement2DSettings() - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.Measurement2DSettings
 
Measurement3DSettings - Class in org.hkijena.jipipe.extensions.ij3d.imageviewer
 
Measurement3DSettings() - Constructor for class org.hkijena.jipipe.extensions.ij3d.imageviewer.Measurement3DSettings
 
MeasurementColumn - Enum in org.hkijena.jipipe.extensions.imagejdatatypes.util.measure
Measurements defined by Measurements.
MeasurementColumnSortOrder - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util.measure
A key-value pair parameter of MeasurementColumn to SortOrder
MeasurementColumnSortOrder() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.MeasurementColumnSortOrder
Creates a new instance
MeasurementColumnSortOrder(MeasurementColumnSortOrder) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.MeasurementColumnSortOrder
Creates a copy
MeasurementColumnSortOrder.List - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util.measure
MeasurementDrawerPlugin2D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer
Mask drawer focuses on measurements (different category and icon)
MeasurementDrawerPlugin2D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MeasurementDrawerPlugin2D
 
MeasurementDrawerPlugin2D.Settings - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer
 
MeasurementExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util.measure
A variable source that contains the ImageJ measurements.
MeasurementExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.MeasurementExpressionParameterVariablesInfo
 
measureROI(ImagePlus, ROIListData, ImageStatisticsSetParameter, boolean, String, ResultsTableData, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.ImageJAlgorithmUtils
 
measureROI(Roi, ImagePlus, boolean, Measurement...) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
measureRoi3d(ImageHandler, ROI3DListData, int, boolean, String, ResultsTableData, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.ij3d.IJ3DUtils
 
measureRoi3dRelation(ImageHandler, ROI3DListData, ROI3DListData, int, boolean, boolean, boolean, boolean, boolean, String, ResultsTableData, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.ij3d.IJ3DUtils
 
measureROIRelation(ImagePlus, ROIListData, ROIListData, int, boolean, boolean, boolean, String, ResultsTableData, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.ImageJAlgorithmUtils
 
MeasureSpotsNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots
 
MeasureSpotsNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.MeasureSpotsNode
 
MeasureSpotsNode(MeasureSpotsNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.MeasureSpotsNode
 
MeasureTracksNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks
 
MeasureTracksNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.MeasureTracksNode
 
MeasureTracksNode(MeasureTracksNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.MeasureTracksNode
 
measureVertex(FilamentVertex, Map<String, Object>, String) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
measureVertices() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
MeasureVerticesAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.measure
 
MeasureVerticesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.measure.MeasureVerticesAlgorithm
 
MeasureVerticesAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.measure.MeasureVerticesAlgorithm
 
Median(ImageProcessor, int, int, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm
 
MedianBlurFilter2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur
Wrapper around RankFilters
MedianBlurFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurFilter2DAlgorithm
Instantiates a new node type.
MedianBlurFilter2DAlgorithm(MedianBlurFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurFilter2DAlgorithm
Instantiates a new node type.
MedianBlurFilter3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur
Wrapper around GaussianBlur
MedianBlurFilter3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm
Instantiates a new node type.
MedianBlurFilter3DAlgorithm(MedianBlurFilter3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm
Instantiates a new node type.
MedianBlurGreyscale8U2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur
Wrapper around ImageProcessor
MedianBlurGreyscale8U2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurGreyscale8U2DAlgorithm
Instantiates a new node type.
MedianBlurGreyscale8U2DAlgorithm(MedianBlurGreyscale8U2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurGreyscale8U2DAlgorithm
Instantiates a new node type.
MedianBlurRGB2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur
Wrapper around ImageProcessor
MedianBlurRGB2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurRGB2DAlgorithm
Instantiates a new node type.
MedianBlurRGB2DAlgorithm(MedianBlurRGB2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurRGB2DAlgorithm
Instantiates a new node type.
MEDIUM_GRAY - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
MeijeringVesselness2DFeatures - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features
Applies CLAHE image enhancing
MeijeringVesselness2DFeatures(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures
 
MeijeringVesselness2DFeatures(MeijeringVesselness2DFeatures) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures
Copies the algorithm
MeltTableAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.transform
Algorithm that integrates columns
MeltTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.transform.MeltTableAlgorithm
Creates a new instance
MeltTableAlgorithm(MeltTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.transform.MeltTableAlgorithm
Creates a copy
MemoryOptionsControl - Class in org.hkijena.jipipe.ui.data
A tool that automatically runs 'update cache' when any parameter or graph property is changed
MemoryOptionsControl(JIPipeProjectWorkbench) - Constructor for class org.hkijena.jipipe.ui.data.MemoryOptionsControl
 
MemoryStatusUI - Class in org.hkijena.jipipe.ui.components
Shows the current memory consumption
MemoryStatusUI() - Constructor for class org.hkijena.jipipe.ui.components.MemoryStatusUI
Creates a new instance
MENU_DISABLED_FOREGROUND - Static variable in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
 
MENU_DISABLED_FOREGROUND - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
menuBar - Variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
MenuManager - Class in org.hkijena.jipipe.utils
Utility class for managing menus
MenuManager() - Constructor for class org.hkijena.jipipe.utils.MenuManager
 
MenuManager(JMenuBar) - Constructor for class org.hkijena.jipipe.utils.MenuManager
 
merge(Collection<JIPipeDataAnnotation>) - Method in enum org.hkijena.jipipe.api.annotation.JIPipeDataAnnotationMergeMode
Ensures that a list of annotations has unique names.
merge(Collection<JIPipeTextAnnotation>) - Method in enum org.hkijena.jipipe.api.annotation.JIPipeTextAnnotationMergeMode
Ensures that a list of annotations has unique names.
merge(String, String) - Method in enum org.hkijena.jipipe.api.annotation.JIPipeTextAnnotationMergeMode
Merges the new annotation value into the existing one according to the strategy
merge(JIPipeParameterCollection, JIPipeParameterTree.Node) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Merges parameters into a given node
Merge2DToHyperstackAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions
 
Merge2DToHyperstackAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.Merge2DToHyperstackAlgorithm
 
Merge2DToHyperstackAlgorithm(Merge2DToHyperstackAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.Merge2DToHyperstackAlgorithm
 
MergeAnnotations - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Algorithm that merges the annotations of all inputs and outputs the data with the shared annotations
MergeAnnotations(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.MergeAnnotations
Creates a new instance
MergeAnnotations(MergeAnnotations) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.MergeAnnotations
Creates a copy
MergeChannelsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color
Wrapper around ImageProcessor
MergeChannelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.MergeChannelsAlgorithm
Instantiates a new node type.
MergeChannelsAlgorithm(MergeChannelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.MergeChannelsAlgorithm
Instantiates a new node type.
MergeChannelsAlgorithm.ChannelColor - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color
Color a slice can be mapped to
mergeColumns(List<Integer>, String, String, String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Creates a new column that consists of a combination of the selected values.
MergeColumnsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.merge
Algorithm that integrates columns
MergeColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeColumnsAlgorithm
Creates a new instance
MergeColumnsAlgorithm(MergeColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeColumnsAlgorithm
Creates a copy
MergeDataSlots - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Merges the input slot tables into one data slot
MergeDataSlots(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.MergeDataSlots
 
MergeDataSlots(MergeDataSlots) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.MergeDataSlots
Copies the algorithm
MergeDataToTableAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms.datatable
 
MergeDataToTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.datatable.MergeDataToTableAlgorithm
 
MergeDataToTableAlgorithm(MergeDataToTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.datatable.MergeDataToTableAlgorithm
 
MergeFilamentsAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.merge
 
MergeFilamentsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.merge.MergeFilamentsAlgorithm
 
MergeFilamentsAlgorithm(MergeFilamentsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.merge.MergeFilamentsAlgorithm
 
MergeImagesAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
 
MergeImagesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.MergeImagesAlgorithm
 
MergeImagesAlgorithm(MergeImagesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.MergeImagesAlgorithm
 
mergeInto(Map<String, JIPipeTextAnnotation>, Collection<JIPipeTextAnnotation>) - Method in enum org.hkijena.jipipe.api.annotation.JIPipeTextAnnotationMergeMode
Ensures that a list of annotations has unique names.
MergeLabelsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
MergeLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsAlgorithm
 
MergeLabelsAlgorithm(MergeLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsAlgorithm
 
MergeLabelsToBinsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
MergeLabelsToBinsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm
 
MergeLabelsToBinsAlgorithm(MergeLabelsToBinsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm
 
MergeLabelsToThicknessAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
MergeLabelsToThicknessAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm
 
MergeLabelsToThicknessAlgorithm(MergeLabelsToThicknessAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm
 
mergeMappedSlices(Map<ImageSliceIndex, ImageProcessor>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
MergeParametersAlgorithm - Class in org.hkijena.jipipe.extensions.multiparameters.nodes
 
MergeParametersAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.MergeParametersAlgorithm
 
MergeParametersAlgorithm(MergeParametersAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.MergeParametersAlgorithm
 
MergeROI3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.merge
 
MergeROI3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.merge.MergeROI3DAlgorithm
 
MergeROI3DAlgorithm(JIPipeMergingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.merge.MergeROI3DAlgorithm
 
MergeRoiListsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge
Wrapper around RoiManager
MergeRoiListsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge.MergeRoiListsAlgorithm
Instantiates a new node type.
MergeRoiListsAlgorithm(MergeRoiListsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge.MergeRoiListsAlgorithm
Instantiates a new node type.
MergeScenesAlgorithm - Class in org.hkijena.jipipe.extensions.scene3d.nodes
 
MergeScenesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.scene3d.nodes.MergeScenesAlgorithm
 
MergeScenesAlgorithm(MergeScenesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.scene3d.nodes.MergeScenesAlgorithm
 
MergeSmallLabelsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
MergeSmallLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm
 
MergeSmallLabelsAlgorithm(MergeSmallLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm
 
MergeSpotsNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots
 
MergeSpotsNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.MergeSpotsNode
 
MergeSpotsNode(MergeSpotsNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.MergeSpotsNode
 
MergeTableColumnsSimpleAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.merge
Algorithm that integrates columns
MergeTableColumnsSimpleAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSimpleAlgorithm
Creates a new instance
MergeTableColumnsSimpleAlgorithm(MergeTableColumnsSimpleAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSimpleAlgorithm
Creates a copy
MergeTableColumnsSupplementAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.merge
Algorithm that integrates columns
MergeTableColumnsSupplementAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm
Creates a new instance
MergeTableColumnsSupplementAlgorithm(MergeTableColumnsSupplementAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm
Creates a copy
MergeTableRowsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.merge
Algorithm that integrates columns
MergeTableRowsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableRowsAlgorithm
Creates a new instance
MergeTableRowsAlgorithm(MergeTableRowsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableRowsAlgorithm
Creates a copy
MergeToJsonIntegratingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.integrating
Implements calculating the sum
MergeToJsonIntegratingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.integrating.MergeToJsonIntegratingColumnOperation
 
MergeTracksNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks
 
MergeTracksNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.MergeTracksNode
 
MergeTracksNode(MergeTracksNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.MergeTracksNode
 
mergeVertices(Collection<FilamentVertex>) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
mergeWith(JIPipeGraph) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Merges another graph into this graph The input is not copied!
mergeWith(Filaments3DData) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
mergeWith(ROIListData) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Merges the ROI from another data into this one.
mergeWithCopy(Filaments3DData) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
MergingFormProcessorAlgorithm - Class in org.hkijena.jipipe.extensions.forms.algorithms
 
MergingFormProcessorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.MergingFormProcessorAlgorithm
 
MergingFormProcessorAlgorithm(MergingFormProcessorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.MergingFormProcessorAlgorithm
 
MergingJythonScriptAlgorithm - Class in org.hkijena.jipipe.extensions.python.algorithms
An algorithm that allows to run Python code
MergingJythonScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.python.algorithms.MergingJythonScriptAlgorithm
Creates a new instance
MergingJythonScriptAlgorithm(MergingJythonScriptAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.python.algorithms.MergingJythonScriptAlgorithm
Creates a copy
MergingPythonScriptAlgorithm - Class in org.hkijena.jipipe.extensions.python.algorithms
An algorithm that allows to run Python code
MergingPythonScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.python.algorithms.MergingPythonScriptAlgorithm
Creates a new instance
MergingPythonScriptAlgorithm(MergingPythonScriptAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.python.algorithms.MergingPythonScriptAlgorithm
Creates a copy
MergingRScriptAlgorithm - Class in org.hkijena.jipipe.extensions.r.algorithms
 
MergingRScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.r.algorithms.MergingRScriptAlgorithm
 
MergingRScriptAlgorithm(MergingRScriptAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.r.algorithms.MergingRScriptAlgorithm
 
Message(MessagePanel, MessagePanel.MessageType, String, boolean, boolean, Component[]) - Constructor for class org.hkijena.jipipe.ui.components.MessagePanel.Message
 
messageLogged(LogMessage) - Method in class org.hkijena.jipipe.ui.components.SplashScreen
 
MessagePanel - Class in org.hkijena.jipipe.ui.components
Panel that carries multiple user-friendly messages
MessagePanel() - Constructor for class org.hkijena.jipipe.ui.components.MessagePanel
 
MessagePanel.Message - Class in org.hkijena.jipipe.ui.components
 
MessagePanel.MessageType - Enum in org.hkijena.jipipe.ui.components
 
Metadata() - Constructor for class org.hkijena.jipipe.extensions.ijweka.datatypes.WekaModelData.Metadata
 
Metadata(WekaSegmentation) - Constructor for class org.hkijena.jipipe.extensions.ijweka.datatypes.WekaModelData.Metadata
 
METADATA_KEY - Static variable in class org.hkijena.jipipe.ui.project.JIPipeProjectTabMetadata
 
METADATA_KEY - Static variable in class org.hkijena.jipipe.ui.settings.JIPipeProjectInfoParameters
 
MetadataEntry() - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry
 
MetadataEntry(ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry
 
MetadataProperty() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm.MetadataProperty
 
MetadataProperty(SetRoiMetadataByStatisticsAlgorithm.MetadataProperty) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm.MetadataProperty
 
MidGrey(ImageProcessor, int, int, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm
 
min - Variable in class org.hkijena.jipipe.utils.PointRange
 
MIN_VISIBLE_ITEMS - Static variable in class org.hkijena.jipipe.ui.extensions.ExtensionListPanel
 
MinicondaCellposeEnvInstaller - Class in org.hkijena.jipipe.extensions.cellpose.installers
 
MinicondaCellposeEnvInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.cellpose.installers.MinicondaCellposeEnvInstaller
 
MinicondaCellposeEnvInstaller.Configuration - Class in org.hkijena.jipipe.extensions.cellpose.installers
 
MinicondaCellposeGPUEnvInstaller - Class in org.hkijena.jipipe.extensions.cellpose.installers
 
MinicondaCellposeGPUEnvInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.cellpose.installers.MinicondaCellposeGPUEnvInstaller
 
MinicondaCellposeGPUEnvInstaller.Configuration - Class in org.hkijena.jipipe.extensions.cellpose.installers
 
MinicondaEnvPythonInstaller - Class in org.hkijena.jipipe.extensions.python.installers
 
MinicondaEnvPythonInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.python.installers.MinicondaEnvPythonInstaller
 
MinicondaEnvPythonInstaller.Configuration - Class in org.hkijena.jipipe.extensions.python.installers
 
minimumLayoutSize(Container) - Method in class org.hkijena.jipipe.ui.components.layouts.ModifiedFlowLayout
 
minimumLayoutSize(Container) - Method in class org.hkijena.jipipe.ui.components.WrapLayout
Returns the minimum dimensions needed to layout the visible components contained in the specified target container.
minTabWidth - Variable in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
MirrorImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds
 
MirrorImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.MirrorImageJ2OutOfBoundsFactoryData
 
MirrorImageJ2OutOfBoundsFactoryData(OutOfBoundsMirrorFactory<?, ?>) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.MirrorImageJ2OutOfBoundsFactoryData
 
MirrorImageJ2OutOfBoundsFactoryData(MirrorImageJ2OutOfBoundsFactoryData) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.MirrorImageJ2OutOfBoundsFactoryData
 
MiscellaneousNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories
 
MiscellaneousNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
MissingRegistrationUpdateSiteResolver - Class in org.hkijena.jipipe.ui.ijupdater
 
MissingRegistrationUpdateSiteResolver(Context, JIPipeRegistryIssues) - Constructor for class org.hkijena.jipipe.ui.ijupdater.MissingRegistrationUpdateSiteResolver
 
mix(Color, Color, double) - Static method in class org.hkijena.jipipe.utils.ColorUtils
 
ModelChangedEvent(ParameterTable, TableModelEvent) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ModelChangedEvent
 
ModelChangedEventEmitter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ModelChangedEventEmitter
 
ModelData - Class in org.hkijena.jipipe.extensions.ijtrackmate.datatypes
 
ModelData(Model, Settings, ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.ModelData
 
ModelData(ModelData) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.ModelData
 
modelToView(int, Shape, Position.Bias) - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Provides a mapping from the document model coordinate space to the coordinate space of the view mapped to it.
ModernMetalTheme - Class in org.hkijena.jipipe.ui.theme
 
ModernMetalTheme() - Constructor for class org.hkijena.jipipe.ui.theme.ModernMetalTheme
Creates an instance of OceanTheme
ModernSliderUI - Class in org.hkijena.jipipe.ui.theme
 
ModernSliderUI(JSlider) - Constructor for class org.hkijena.jipipe.ui.theme.ModernSliderUI
 
ModernSpinnerUI - Class in org.hkijena.jipipe.ui.theme
 
ModernSpinnerUI() - Constructor for class org.hkijena.jipipe.ui.theme.ModernSpinnerUI
 
ModifiedEvent(JIPipeCache) - Constructor for class org.hkijena.jipipe.api.cache.JIPipeCache.ModifiedEvent
 
ModifiedEventEmitter() - Constructor for class org.hkijena.jipipe.api.cache.JIPipeCache.ModifiedEventEmitter
 
ModifiedFlowLayout - Class in org.hkijena.jipipe.ui.components.layouts
A modified version of FlowLayout that allows containers using this Layout to behave in a reasonable manner when placed inside a JScrollPane
ModifiedFlowLayout() - Constructor for class org.hkijena.jipipe.ui.components.layouts.ModifiedFlowLayout
 
ModifiedFlowLayout(int) - Constructor for class org.hkijena.jipipe.ui.components.layouts.ModifiedFlowLayout
 
ModifiedFlowLayout(int, int, int) - Constructor for class org.hkijena.jipipe.ui.components.layouts.ModifiedFlowLayout
 
ModifyAndMergeTablesScript - Class in org.hkijena.jipipe.extensions.tables.nodes
Algorithm that annotates all data with the same annotation
ModifyAndMergeTablesScript(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.ModifyAndMergeTablesScript
 
ModifyAndMergeTablesScript(ModifyAndMergeTablesScript) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.ModifyAndMergeTablesScript
Copies the algorithm
ModifyAnnotationScript - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Algorithm that annotates all data with the same annotation
ModifyAnnotationScript(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.ModifyAnnotationScript
 
ModifyAnnotationScript(ModifyAnnotationScript) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.ModifyAnnotationScript
Copies the algorithm
ModifyPath - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
 
ModifyPath(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ModifyPath
 
ModifyPath(ModifyPath) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ModifyPath
 
ModifyPathWithExpression - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
 
ModifyPathWithExpression(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ModifyPathWithExpression
 
ModifyPathWithExpression(ModifyPathWithExpression) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ModifyPathWithExpression
 
ModifyTableColumnNamesAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes
 
ModifyTableColumnNamesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.ModifyTableColumnNamesAlgorithm
 
ModifyTableColumnNamesAlgorithm(ModifyTableColumnNamesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.ModifyTableColumnNamesAlgorithm
 
ModifyTablesScript - Class in org.hkijena.jipipe.extensions.tables.nodes
Algorithm that annotates all data with the same annotation
ModifyTablesScript(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.ModifyTablesScript
 
ModifyTablesScript(ModifyTablesScript) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.ModifyTablesScript
Copies the algorithm
moduleItemIsParameter(ModuleItem<?>) - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNode
 
MonochromeColorIcon - Class in org.hkijena.jipipe.ui.components.icons
Icon that takes an existing image icon and uses it as mask for recoloring
MonochromeColorIcon(ImageIcon) - Constructor for class org.hkijena.jipipe.ui.components.icons.MonochromeColorIcon
Creates a white icon
MonochromeColorIcon(ImageIcon, Color) - Constructor for class org.hkijena.jipipe.ui.components.icons.MonochromeColorIcon
 
MontageCreator - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
Custom algorithm for creating montages
MontageCreator() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
MontageCreator(MontageCreator) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
MontageCreator.CanvasParameters - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
MontageCreator.ImageParameters - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
MontageCreator.InputEntry - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
MontageCreator.LabelledImage - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
MontageCreator.LabelParameters - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
MontageToStackAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage
Implementation of MontageMaker
MontageToStackAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.MontageToStackAlgorithm
 
MontageToStackAlgorithm(MontageToStackAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.MontageToStackAlgorithm
 
months - Static variable in class org.hkijena.jipipe.ui.ijupdater.SingleFileSelectionPanel
 
MorphologicalReconstruction2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
 
MorphologicalReconstruction2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologicalReconstruction2DAlgorithm
 
MorphologicalReconstruction2DAlgorithm(MorphologicalReconstruction2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologicalReconstruction2DAlgorithm
 
MorphologicalReconstruction3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
 
MorphologicalReconstruction3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologicalReconstruction3DAlgorithm
 
MorphologicalReconstruction3DAlgorithm(MorphologicalReconstruction3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologicalReconstruction3DAlgorithm
 
Morphology2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
Wrapper around ImageProcessor
Morphology2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm
Instantiates a new node type.
Morphology2DAlgorithm(Morphology2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm
Instantiates a new node type.
Morphology3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
Wrapper around ImageProcessor
Morphology3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm
Instantiates a new node type.
Morphology3DAlgorithm(Morphology3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm
Instantiates a new node type.
MorphologyBinary2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
Wrapper around ImageProcessor
MorphologyBinary2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm
Instantiates a new node type.
MorphologyBinary2DAlgorithm(MorphologyBinary2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm
Instantiates a new node type.
MorphologyBinary2DAlgorithm.Operation - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
Available transformation functions
MorphologyFillHoles2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
Wrapper around ImageProcessor
MorphologyFillHoles2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyFillHoles2DAlgorithm
Instantiates a new node type.
MorphologyFillHoles2DAlgorithm(MorphologyFillHoles2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyFillHoles2DAlgorithm
Instantiates a new node type.
MorphologyInternalGradient2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
Wrapper around ImageProcessor
MorphologyInternalGradient2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyInternalGradient2DAlgorithm
Instantiates a new node type.
MorphologyInternalGradient2DAlgorithm(MorphologyInternalGradient2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyInternalGradient2DAlgorithm
Instantiates a new node type.
MorphologyOutline2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
Wrapper around ImageProcessor
MorphologyOutline2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyOutline2DAlgorithm
Instantiates a new node type.
MorphologyOutline2DAlgorithm(MorphologyOutline2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyOutline2DAlgorithm
Instantiates a new node type.
MorphologySkeletonize2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
Wrapper around ImageProcessor
MorphologySkeletonize2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologySkeletonize2DAlgorithm
Instantiates a new node type.
MorphologySkeletonize2DAlgorithm(MorphologySkeletonize2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologySkeletonize2DAlgorithm
Instantiates a new node type.
MorphologySkeletonize3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
 
MorphologySkeletonize3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologySkeletonize3DAlgorithm
 
MorphologySkeletonize3DAlgorithm(MorphologySkeletonize3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologySkeletonize3DAlgorithm
 
mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool
 
mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.ui.components.MessagePanel.Message
 
mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeIconPickerDialog
 
mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorMinimap
 
mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
mouseClicked(MouseEvent) - Method in class org.hkijena.jipipe.utils.UIUtils.DragThroughMouseListener
 
MouseClickedEvent - Class in org.hkijena.jipipe.utils.ui.events
 
MouseClickedEvent(Component, int, long, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseClickedEvent
 
MouseClickedEvent(Component, int, long, int, int, int, int, boolean) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseClickedEvent
 
MouseClickedEvent(Component, int, long, int, int, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseClickedEvent
 
MouseClickedEventEmitter - Class in org.hkijena.jipipe.utils.ui.events
 
MouseClickedEventEmitter() - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseClickedEventEmitter
 
MouseClickedEventListener - Interface in org.hkijena.jipipe.utils.ui.events
 
mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool
 
mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorMinimap
 
mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
mouseDragged(MouseEvent) - Method in class org.hkijena.jipipe.utils.UIUtils.DragThroughMouseListener
 
MouseDraggedEvent - Class in org.hkijena.jipipe.utils.ui.events
 
MouseDraggedEvent(Component, int, long, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseDraggedEvent
 
MouseDraggedEvent(Component, int, long, int, int, int, int, boolean) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseDraggedEvent
 
MouseDraggedEvent(Component, int, long, int, int, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseDraggedEvent
 
MouseDraggedEventEmitter - Class in org.hkijena.jipipe.utils.ui.events
 
MouseDraggedEventEmitter() - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseDraggedEventEmitter
 
MouseDraggedEventListener - Interface in org.hkijena.jipipe.utils.ui.events
 
mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool
 
mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.ui.components.MessagePanel.Message
 
mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeIconPickerDialog
 
mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorMinimap
 
mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
mouseEntered(MouseEvent) - Method in class org.hkijena.jipipe.utils.UIUtils.DragThroughMouseListener
 
MouseEnteredEvent - Class in org.hkijena.jipipe.utils.ui.events
 
MouseEnteredEvent(Component, int, long, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseEnteredEvent
 
MouseEnteredEvent(Component, int, long, int, int, int, int, boolean) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseEnteredEvent
 
MouseEnteredEvent(Component, int, long, int, int, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseEnteredEvent
 
MouseEnteredEventEmitter - Class in org.hkijena.jipipe.utils.ui.events
 
MouseEnteredEventEmitter() - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseEnteredEventEmitter
 
MouseEnteredEventListener - Interface in org.hkijena.jipipe.utils.ui.events
 
mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool
 
mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.ui.components.MessagePanel.Message
 
mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeIconPickerDialog
 
mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorMinimap
 
mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
mouseExited(MouseEvent) - Method in class org.hkijena.jipipe.utils.UIUtils.DragThroughMouseListener
 
MouseExitedEvent - Class in org.hkijena.jipipe.utils.ui.events
 
MouseExitedEvent(Component, int, long, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseExitedEvent
 
MouseExitedEvent(Component, int, long, int, int, int, int, boolean) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseExitedEvent
 
MouseExitedEvent(Component, int, long, int, int, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseExitedEvent
 
MouseExitedEventEmitter - Class in org.hkijena.jipipe.utils.ui.events
 
MouseExitedEventEmitter() - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseExitedEventEmitter
 
MouseExitedEventListener - Interface in org.hkijena.jipipe.utils.ui.events
 
MouseMaskDrawer2DTool - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer
The standard mouse selection.
MouseMaskDrawer2DTool(MaskDrawerPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MouseMaskDrawer2DTool
 
mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool
 
mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorMinimap
 
mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
mouseMoved(MouseEvent) - Method in class org.hkijena.jipipe.utils.UIUtils.DragThroughMouseListener
 
MouseMovedEvent - Class in org.hkijena.jipipe.utils.ui.events
 
MouseMovedEvent(Component, int, long, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseMovedEvent
 
MouseMovedEvent(Component, int, long, int, int, int, int, boolean) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseMovedEvent
 
MouseMovedEvent(Component, int, long, int, int, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseMovedEvent
 
MouseMovedEventEmitter - Class in org.hkijena.jipipe.utils.ui.events
 
MouseMovedEventEmitter() - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseMovedEventEmitter
 
MouseMovedEventListener - Interface in org.hkijena.jipipe.utils.ui.events
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerLUTEditor
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerOpacityLUTEditor
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.ui.components.MessagePanel.Message
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeIconPickerDialog
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorMinimap
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
mousePressed(MouseEvent) - Method in class org.hkijena.jipipe.utils.UIUtils.DragThroughMouseListener
 
MousePressedEvent - Class in org.hkijena.jipipe.utils.ui.events
 
MousePressedEvent(Component, int, long, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MousePressedEvent
 
MousePressedEvent(Component, int, long, int, int, int, int, boolean) - Constructor for class org.hkijena.jipipe.utils.ui.events.MousePressedEvent
 
MousePressedEvent(Component, int, long, int, int, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MousePressedEvent
 
MousePressedEventEmitter - Class in org.hkijena.jipipe.utils.ui.events
 
MousePressedEventEmitter() - Constructor for class org.hkijena.jipipe.utils.ui.events.MousePressedEventEmitter
 
MousePressedEventListener - Interface in org.hkijena.jipipe.utils.ui.events
 
mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool
 
mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.ui.components.MessagePanel.Message
 
mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeIconPickerDialog
 
mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorMinimap
 
mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
mouseReleased(MouseEvent) - Method in class org.hkijena.jipipe.utils.UIUtils.DragThroughMouseListener
 
MouseReleasedEvent - Class in org.hkijena.jipipe.utils.ui.events
 
MouseReleasedEvent(Component, int, long, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseReleasedEvent
 
MouseReleasedEvent(Component, int, long, int, int, int, int, boolean) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseReleasedEvent
 
MouseReleasedEvent(Component, int, long, int, int, int, int, int, int, boolean, int) - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseReleasedEvent
 
MouseReleasedEventEmitter - Class in org.hkijena.jipipe.utils.ui.events
 
MouseReleasedEventEmitter() - Constructor for class org.hkijena.jipipe.utils.ui.events.MouseReleasedEventEmitter
 
MouseReleasedEventListener - Interface in org.hkijena.jipipe.utils.ui.events
 
mouseWheelMoved(MouseWheelEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
moveBackIntoViewIfOutside() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
Moves the image back into the view if its not visible
moveCompositePriorityDown(int) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
moveCompositePriorityUp(int) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
moveDown(String, JIPipeSlotType) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Moves the specified slot down in its order
moveDown(String, JIPipeSlotType) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
MoveNodeUIDownContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation
 
MoveNodeUIDownContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIDownContextAction
 
MoveNodeUILeftContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation
 
MoveNodeUILeftContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUILeftContextAction
 
MoveNodeUIRightContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation
 
MoveNodeUIRightContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIRightContextAction
 
MoveNodeUIUpContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation
 
MoveNodeUIUpContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIUpContextAction
 
moveSelection(int, int, boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
moveSeriesDown(JIPipePlotSeriesBuilder) - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
Moves the series down in order
moveSeriesUp(JIPipePlotSeriesBuilder) - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
Moves the series up in order
moveToClosestGridPoint(Point, boolean, boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
Moves the node to the next grid location, given a real location
moveToGridLocation(Point, boolean, boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
Moves the node to a grid location
moveToStoredGridLocation(boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
Moves the UI back to the stored grid location
moveUp(String, JIPipeSlotType) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Moves the specified slot up in its order
moveUp(String, JIPipeSlotType) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
MSEBlockFlowAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow
Adapted from MSEBlockFlow, as the methods there are all protected/private
MSEBlockFlowAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm
 
MSEBlockFlowAlgorithm(MSEBlockFlowAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm
 
MSEGaussianFlowAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow
Adapted from MSEGaussianFlow, as the methods there are all protected/private
MSEGaussianFlowAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm
 
MSEGaussianFlowAlgorithm(MSEGaussianFlowAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm
 
MSTGraphAutoLayoutMethod - Class in org.hkijena.jipipe.ui.grapheditor.general.layout
MST-based auto-layout method
MSTGraphAutoLayoutMethod() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.layout.MSTGraphAutoLayoutMethod
 
MSTGraphAutoLayoutMethod.Edge - Class in org.hkijena.jipipe.ui.grapheditor.general.layout
 
MSTGraphAutoLayoutMethod.Node - Class in org.hkijena.jipipe.ui.grapheditor.general.layout
 
MultiDataSlotTableColumnRenderer(JIPipeExtendedMultiDataTableModel) - Constructor for class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableUI.MultiDataSlotTableColumnRenderer
Creates a new instance
MultiFileSelectionPanel - Class in org.hkijena.jipipe.ui.ijupdater
Opened when selecting one file
MultiFileSelectionPanel(JIPipeWorkbench, ManagerUI, Set<FileObject>) - Constructor for class org.hkijena.jipipe.ui.ijupdater.MultiFileSelectionPanel
 
MultiIterationStepCheckerAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps
 
MultiIterationStepCheckerAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm
 
MultiIterationStepCheckerAlgorithm(MultiIterationStepCheckerAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm
 
MultiOrthoSlicerSettings() - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.MultiOrthoSlicerSettings
 
MultiParameterAlgorithmsPlugin - Class in org.hkijena.jipipe.extensions.multiparameters
Extension that provides capabilities to run multiple parameters
MultiParameterAlgorithmsPlugin() - Constructor for class org.hkijena.jipipe.extensions.multiparameters.MultiParameterAlgorithmsPlugin
 
MultiParametersPlugin - Class in org.hkijena.jipipe.extensions.multiparameters
Extension that provides capabilities to run multiple parameters
MultiParametersPlugin() - Constructor for class org.hkijena.jipipe.extensions.multiparameters.MultiParametersPlugin
 
multiplyHSB(Color, float, float, float) - Static method in class org.hkijena.jipipe.utils.ColorUtils
 
multiplyScalar(List<Double>, double) - Static method in class org.hkijena.jipipe.utils.VectorUtils
 
MultiSelectionModel - Class in org.hkijena.jipipe.ui.components
Selection model for multiple selections
MultiSelectionModel() - Constructor for class org.hkijena.jipipe.ui.components.MultiSelectionModel
 
MultiTemplateMatchingAlgorithm - Class in org.hkijena.jipipe.extensions.ijmultitemplatematching
 
MultiTemplateMatchingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
MultiTemplateMatchingAlgorithm(MultiTemplateMatchingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
MultiTemplateMatchingPlugin - Class in org.hkijena.jipipe.extensions.ijmultitemplatematching
Extension that adds ImageJ2 algorithms
MultiTemplateMatchingPlugin() - Constructor for class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingPlugin
 
MutableTableColumn - Interface in org.hkijena.jipipe.extensions.tables
A TableColumn that carries data and is therefore mutable

N

name() - Method in class org.hkijena.jipipe.api.JIPipeDocumentation
 
NamedStringQueryExpression - Class in org.hkijena.jipipe.extensions.expressions
 
NamedStringQueryExpression() - Constructor for class org.hkijena.jipipe.extensions.expressions.NamedStringQueryExpression
 
NamedStringQueryExpression(PairParameter<String, StringQueryExpression>) - Constructor for class org.hkijena.jipipe.extensions.expressions.NamedStringQueryExpression
 
NamedStringQueryExpression.List - Class in org.hkijena.jipipe.extensions.expressions
 
NamedTextAnnotationGeneratorExpression - Class in org.hkijena.jipipe.extensions.expressions
 
NamedTextAnnotationGeneratorExpression() - Constructor for class org.hkijena.jipipe.extensions.expressions.NamedTextAnnotationGeneratorExpression
 
NamedTextAnnotationGeneratorExpression(AnnotationGeneratorExpression, String) - Constructor for class org.hkijena.jipipe.extensions.expressions.NamedTextAnnotationGeneratorExpression
 
NamedTextAnnotationGeneratorExpression(PairParameter<AnnotationGeneratorExpression, String>) - Constructor for class org.hkijena.jipipe.extensions.expressions.NamedTextAnnotationGeneratorExpression
 
NamedTextAnnotationGeneratorExpression.List - Class in org.hkijena.jipipe.extensions.expressions
 
nameEquals(JIPipeTextAnnotation, JIPipeTextAnnotation) - Static method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
Returns true if both have the same name.
nameEquals(JIPipeTextAnnotation) - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
Returns true if the names are equal
nameEquals(String) - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
Returns true if the name equals the string
nameEquals(JIPipeExportedDataAnnotation) - Method in class org.hkijena.jipipe.api.data.JIPipeExportedDataAnnotation
 
nameEquals(String) - Method in class org.hkijena.jipipe.api.data.JIPipeExportedDataAnnotation
 
NaturalOrderComparator<T> - Class in org.hkijena.jipipe.utils
 
NaturalOrderComparator() - Constructor for class org.hkijena.jipipe.utils.NaturalOrderComparator
 
NavigableJIPipeValidationReportContext - Class in org.hkijena.jipipe.api.validation
A JIPipeValidationReportContext that can navigate to an UI element
NavigableJIPipeValidationReportContext() - Constructor for class org.hkijena.jipipe.api.validation.NavigableJIPipeValidationReportContext
 
NavigableJIPipeValidationReportContext(JIPipeValidationReportContext) - Constructor for class org.hkijena.jipipe.api.validation.NavigableJIPipeValidationReportContext
 
navigate(JIPipeWorkbench) - Method in class org.hkijena.jipipe.api.validation.contexts.GraphNodeValidationReportContext
 
navigate(JIPipeWorkbench) - Method in class org.hkijena.jipipe.api.validation.NavigableJIPipeValidationReportContext
 
NavigationRenderer() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI.NavigationRenderer
Creates a new instance
Neighborhood2D - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.parameters
 
Neighborhood2D3D - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.parameters
 
Neighborhood3D - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.parameters
 
NetworkUtils - Class in org.hkijena.jipipe.utils
 
NetworkUtils() - Constructor for class org.hkijena.jipipe.utils.NetworkUtils
 
newInstance(Object...) - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
Creates a new instance
newInstance() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
newInstance() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo
 
newInstance() - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo
 
newInstance() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeInfo
Creates a new node type instance
newInstance() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDefaultParameterTypeInfo
 
newInstance() - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterTypeInfo
Creates a new non-null instance of the parameter type
newInstance() - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNodeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNodeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNodeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterTypeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanParameterTypeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanPrimitiveParameterTypeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ByteParameterTypeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BytePrimitiveParameterTypeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.DoubleParameterTypeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.DoublePrimitiveParameterTypeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.FloatParameterTypeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.FloatPrimitiveParameterTypeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.IntParameterTypeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.IntPrimitiveParameterTypeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.LongParameterTypeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.LongPrimitiveParameterTypeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ShortParameterTypeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ShortPrimitiveParameterTypeInfo
 
newInstance() - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2AlgorithmInfo
 
newInstance(Class<?>, Object...) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
Creates a new class instance.
NewLineConstant - Class in org.hkijena.jipipe.extensions.expressions.constants
 
NewLineConstant() - Constructor for class org.hkijena.jipipe.extensions.expressions.constants.NewLineConstant
 
NewPlotJIPipeMenuExtension - Class in org.hkijena.jipipe.extensions.plots
Adds an entry "New plot" to the JIPipe menu
NewPlotJIPipeMenuExtension(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.plots.NewPlotJIPipeMenuExtension
Creates a new instance
newProject(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
Creates a new project and asks the user if it should be opened in this or a new window
newProject() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
Creates a new project.
newProjectFromTemplate() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
Creates a new project from template
newProjectFromTemplate(JIPipeProjectTemplate) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
Creates a new project from template
NewSplitChannelsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color
Wrapper around ChannelSplitter
NewSplitChannelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm
Instantiates a new node type.
NewSplitChannelsAlgorithm(NewSplitChannelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm
Creates a copy
NewTableJIPipeMenuExtension - Class in org.hkijena.jipipe.extensions.tables
Adds an entry "New table" to the JIPipe menu
NewTableJIPipeMenuExtension(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.tables.NewTableJIPipeMenuExtension
Creates a new instance
newText(String) - Method in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
newText(String, SimpleAttributeSet) - Method in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
NewThrobberIcon - Class in org.hkijena.jipipe.ui.components.icons
 
NewThrobberIcon(Component) - Constructor for class org.hkijena.jipipe.ui.components.icons.NewThrobberIcon
 
newWindow(Context, JIPipeJsonPlugin, boolean) - Static method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
Opens a new window
newWindow(Context, JIPipeProject, boolean, boolean) - Static method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
Creates a new window
NewZProjectorAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions
Wrapper around ZProjector
NewZProjectorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm
Instantiates a new node type.
NewZProjectorAlgorithm(NewZProjectorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm
Instantiates a new node type.
Niblack(ImageProcessor, int, double, int, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm
 
NiblackLocalAutoThreshold2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local
Segmenter node that thresholds via an auto threshold Based on code from Auto_Local_Threshold
NiblackLocalAutoThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm
 
NiblackLocalAutoThreshold2DAlgorithm(NiblackLocalAutoThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm
Copies the algorithm
NO_EMPTY_GROUP_HEADERS - Static variable in class org.hkijena.jipipe.ui.parameters.ParameterPanel
Flag for ParameterPanel.
NO_GROUP_HEADERS - Static variable in class org.hkijena.jipipe.ui.parameters.ParameterPanel
Flag for ParameterPanel.
NO_IMAGEJ - Static variable in class org.hkijena.jipipe.JIPipe
 
NO_SETTINGS_AUTOSAVE - Static variable in class org.hkijena.jipipe.JIPipe
 
Node(JIPipeParameterTree.Node, JIPipeParameterCollection) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
Creates a node
Node(JIPipeGraphNodeUI) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.layout.MSTGraphAutoLayoutMethod.Node
 
NodeAddedEvent(JIPipeGraph, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeAddedEvent
 
NodeAddedEventEmitter() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeAddedEventEmitter
 
NodeConnectedEvent(JIPipeGraph, JIPipeDataSlot, JIPipeDataSlot) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeConnectedEvent
 
NodeConnectedEventEmitter() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeConnectedEventEmitter
 
NodeContextActionWrapperUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
NodeContextActionWrapperUIContextAction(JIPipeNodeInfo, String, String, Icon, Method) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeContextActionWrapperUIContextAction
 
NodeDatabaseSearchBox - Class in org.hkijena.jipipe.ui.grapheditor.general.search
A JComboBox that implements a search behavior
NodeDatabaseSearchBox(JIPipeWorkbench, JIPipeGraphCanvasUI, JIPipeNodeDatabaseRole, JIPipeNodeDatabase) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox
Creates a new instance
NodeDatabaseSearchBox.SelectedEvent - Class in org.hkijena.jipipe.ui.grapheditor.general.search
 
NodeDatabaseSearchBox.SelectedEventEmitter - Class in org.hkijena.jipipe.ui.grapheditor.general.search
 
NodeDatabaseSearchBox.SelectedEventListener - Interface in org.hkijena.jipipe.ui.grapheditor.general.search
 
NodeDatabaseSearchBoxListCellRenderer - Class in org.hkijena.jipipe.ui.grapheditor.general.search
 
NodeDatabaseSearchBoxListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBoxListCellRenderer
Creates a new instance
NodeDisconnectedEvent(JIPipeGraph, JIPipeDataSlot, JIPipeDataSlot) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeDisconnectedEvent
 
NodeDisconnectedEventEmitter() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeDisconnectedEventEmitter
 
NodeExamplesUI - Class in org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties
 
NodeExamplesUI(JIPipeProjectWorkbench, JIPipeAlgorithm, DocumentTabPane) - Constructor for class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties.NodeExamplesUI
 
NodeFinderDatasetListCellRenderer - Class in org.hkijena.jipipe.ui.grapheditor.nodefinder
 
NodeFinderDatasetListCellRenderer(JIPipeNodeFinderDialogUI) - Constructor for class org.hkijena.jipipe.ui.grapheditor.nodefinder.NodeFinderDatasetListCellRenderer
 
NodeGroup - Class in org.hkijena.jipipe.api.grouping
A sub-graph algorithm that can be defined by a user
NodeGroup(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.api.grouping.NodeGroup
Creates a new instance
NodeGroup(NodeGroup) - Constructor for class org.hkijena.jipipe.api.grouping.NodeGroup
Creates a copy
NodeGroup(JIPipeGraph, boolean, boolean, boolean) - Constructor for class org.hkijena.jipipe.api.grouping.NodeGroup
Initializes from an existing graph
NodeGroupContents - Class in org.hkijena.jipipe.api.grouping.parameters
 
NodeGroupContents() - Constructor for class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents
Creates a new empty instance
NodeGroupContents(NodeGroupContents) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents
Makes a copy
NodeGroupContents.Deserializer - Class in org.hkijena.jipipe.api.grouping.parameters
 
NodeGroupContents.Serializer - Class in org.hkijena.jipipe.api.grouping.parameters
 
NodeGroupContentsParameterEditorUI - Class in org.hkijena.jipipe.api.grouping.parameters
NodeGroupContentsParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContentsParameterEditorUI
Creates new instance
NodeHotKeyStorage - Class in org.hkijena.jipipe.ui.grapheditor
JSON-serializable class that stores node hotkeys
NodeHotKeyStorage() - Constructor for class org.hkijena.jipipe.ui.grapheditor.NodeHotKeyStorage
 
NodeHotKeyStorage.Hotkey - Enum in org.hkijena.jipipe.ui.grapheditor
 
NodeInfoDeselectedEvent(JIPipeNodeInfoPicker, JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.NodeInfoDeselectedEvent
 
NodeInfoDeselectedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.NodeInfoDeselectedEventEmitter
 
NodeInfoRegisteredEvent(JIPipeService, JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.JIPipeService.NodeInfoRegisteredEvent
 
NodeInfoRegisteredEventEmitter() - Constructor for class org.hkijena.jipipe.JIPipeService.NodeInfoRegisteredEventEmitter
 
NodeInfoSelectedEvent(JIPipeNodeInfoPicker, JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.NodeInfoSelectedEvent
 
NodeInfoSelectedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.NodeInfoSelectedEventEmitter
 
NodeRemovedEvent(JIPipeGraph, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeRemovedEvent
 
NodeRemovedEventEmitter() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeRemovedEventEmitter
 
NodeSelectionChangedEvent(JIPipeGraphCanvasUI) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.NodeSelectionChangedEvent
 
NodeSelectionChangedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.NodeSelectionChangedEventEmitter
 
nodesFromJson(JsonNode, JIPipeValidationReportContext, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
NodeSlotsChangedEvent(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.NodeSlotsChangedEvent
 
NodeSlotsChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.NodeSlotsChangedEventEmitter
 
NodeTemplateBox - Class in org.hkijena.jipipe.extensions.nodetemplate
 
NodeTemplateBox(JIPipeWorkbench, boolean, JIPipeGraphCanvasUI, Set<JIPipeGraphNode>) - Constructor for class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplateBox
 
NodeTemplateBoxToolPlugin - Class in org.hkijena.jipipe.extensions.nodetemplate
 
NodeTemplateBoxToolPlugin() - Constructor for class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplateBoxToolPlugin
 
NodeTemplateBoxTransferHandler - Class in org.hkijena.jipipe.extensions.nodetemplate
 
NodeTemplateBoxTransferHandler() - Constructor for class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplateBoxTransferHandler
 
NodeTemplateDownloaderDialog - Class in org.hkijena.jipipe.extensions.nodetemplate.templatedownloader
 
NodeTemplateDownloaderDialog(NodeTemplateDownloaderRun) - Constructor for class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderDialog
 
NodeTemplateDownloaderPackage - Class in org.hkijena.jipipe.extensions.nodetemplate.templatedownloader
 
NodeTemplateDownloaderPackage() - Constructor for class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage
 
NodeTemplateDownloaderRepository - Class in org.hkijena.jipipe.extensions.nodetemplate.templatedownloader
 
NodeTemplateDownloaderRepository() - Constructor for class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderRepository
 
NodeTemplateDownloaderRun - Class in org.hkijena.jipipe.extensions.nodetemplate.templatedownloader
 
NodeTemplateDownloaderRun(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderRun
 
NodeTemplateMenu - Class in org.hkijena.jipipe.extensions.nodetemplate
 
NodeTemplateMenu(JIPipeWorkbench, JIPipeGraphEditorUI) - Constructor for class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplateMenu
 
NodeTemplateSettings - Class in org.hkijena.jipipe.extensions.settings
 
NodeTemplateSettings() - Constructor for class org.hkijena.jipipe.extensions.settings.NodeTemplateSettings
 
NodeTemplatesRefreshedEvent - Class in org.hkijena.jipipe.extensions.nodetemplate
This event should always be triggered into NodeTemplateSettings.getInstance().getEventBus() (even if non-global).
NodeTemplatesRefreshedEvent() - Constructor for class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplatesRefreshedEvent
 
NodeTemplatesRefreshedEventEmitter - Class in org.hkijena.jipipe.extensions.nodetemplate
 
NodeTemplatesRefreshedEventEmitter() - Constructor for class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplatesRefreshedEventEmitter
 
NodeTemplatesRefreshedEventListener - Interface in org.hkijena.jipipe.extensions.nodetemplate
 
NodeToolBox - Class in org.hkijena.jipipe.extensions.nodetoolboxtool
 
NodeToolBox(JIPipeWorkbench, boolean) - Constructor for class org.hkijena.jipipe.extensions.nodetoolboxtool.NodeToolBox
 
NodeToolBox.ReloadListRun - Class in org.hkijena.jipipe.extensions.nodetoolboxtool
 
NodeToolBoxTransferHandler - Class in org.hkijena.jipipe.extensions.nodetoolboxtool
 
NodeToolBoxTransferHandler() - Constructor for class org.hkijena.jipipe.extensions.nodetoolboxtool.NodeToolBoxTransferHandler
 
nodeToString(Node, boolean, boolean) - Static method in class org.hkijena.jipipe.utils.xml.XmlUtils
 
NodeUIActionRequestedEvent(JIPipeGraphNodeUI, JIPipeNodeUIAction) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI.NodeUIActionRequestedEvent
Initializes a new instance
NodeUIActionRequestedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI.NodeUIActionRequestedEventEmitter
 
NodeUIContextAction - Interface in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
An action that is applied one or multiple algorithms
NodeUISelectedEvent(JIPipeGraphNodeUI, boolean) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.NodeUISelectedEvent
 
NodeUISelectedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.NodeUISelectedEventEmitter
 
NONE - Static variable in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
No flags
NONE - Static variable in class org.hkijena.jipipe.ui.components.FlexContentPanel
 
NONE - Static variable in class org.hkijena.jipipe.ui.components.FormPanel
Flag that indicates no modifications, meaning (1) No documentation, and (2) no scrolling
NONE - Static variable in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
NonGenericClassFilter - Class in org.hkijena.jipipe.utils.classfilters
 
NonGenericClassFilter() - Constructor for class org.hkijena.jipipe.utils.classfilters.NonGenericClassFilter
 
NonGenericImagePlusDataClassFilter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.filters
Filters for image types that can be used for creating new instances.
NonGenericImagePlusDataClassFilter() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.filters.NonGenericImagePlusDataClassFilter
 
NonSpatialPoint3d - Class in org.hkijena.jipipe.extensions.ijfilaments.util
 
NonSpatialPoint3d() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.util.NonSpatialPoint3d
 
NonSpatialPoint3d(int, int) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.util.NonSpatialPoint3d
 
NonSpatialPoint3d(NonSpatialPoint3d) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.util.NonSpatialPoint3d
 
normal - Variable in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
normalize(List<TableColumn>, int) - Method in enum org.hkijena.jipipe.extensions.tables.datatypes.TableColumnNormalization
Generates columns that have the same number of true rows
normalize(List<TableColumn>) - Method in enum org.hkijena.jipipe.extensions.tables.datatypes.TableColumnNormalization
Generates columns that have the same number of true rows
normalize(ResultsTableData, int) - Method in enum org.hkijena.jipipe.extensions.tables.datatypes.TableColumnNormalization
Normalizes a whole table
normalize(Path) - Static method in class org.hkijena.jipipe.utils.PathUtils
 
normalize(List<Double>) - Static method in class org.hkijena.jipipe.utils.VectorUtils
 
normalizeList(List<Path>) - Static method in class org.hkijena.jipipe.utils.PathUtils
Converts UNIX paths to Windows and Windows paths to UNIX
normalizeTabRuns(int, int, int, int) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI.TabbedPaneLayout
 
NotificationButton - Class in org.hkijena.jipipe.ui.notifications
UI that monitors the queue
NotificationButton(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.ui.notifications.NotificationButton
 
NotificationUISettings - Class in org.hkijena.jipipe.extensions.settings
 
NotificationUISettings() - Constructor for class org.hkijena.jipipe.extensions.settings.NotificationUISettings
 
NucleiSegmentation3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.segmentation
 
NucleiSegmentation3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.NucleiSegmentation3DAlgorithm
 
NucleiSegmentation3DAlgorithm(NucleiSegmentation3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.NucleiSegmentation3DAlgorithm
 
NullConstant - Class in org.hkijena.jipipe.extensions.expressions.constants
 
NullConstant() - Constructor for class org.hkijena.jipipe.extensions.expressions.constants.NullConstant
 
nullTerminate(String) - Static method in class org.hkijena.jipipe.utils.StringUtils
Applies a \0 termination to a string.
nullToEmpty(Object) - Static method in class org.hkijena.jipipe.utils.StringUtils
Returns an empty string if s is null otherwise returns s
nullToFalseOrPredicate(T, Predicate<T>) - Static method in class org.hkijena.jipipe.utils.StreamUtils
Returns false if the nullable is null.
NumberEditor() - Constructor for class org.hkijena.jipipe.ui.tableeditor.TableEditor.NumberEditor
 
NumberParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Editor for a any numeric parameter
NumberParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.NumberParameterEditorUI
 
NumberParameterSettings - Annotation Type in org.hkijena.jipipe.extensions.parameters.library.primitives
Attached to the getter or setter of Number parameter to setup the GUI
NumberQueryExpressionVariablesInfo - Class in org.hkijena.jipipe.extensions.expressions
Variables for querying strings
NumberQueryExpressionVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.expressions.NumberQueryExpressionVariablesInfo
 
NumberRangeInvertedMode - Enum in org.hkijena.jipipe.extensions.parameters.library.ranges
 
NumberRangeParameter - Class in org.hkijena.jipipe.extensions.parameters.library.ranges
 
NumberRangeParameter(Number, Number) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameter
 
NumberRangeParameter(NumberRangeParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameter
 
NumberRangeParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.ranges
 
NumberRangeParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI
Creates new instance
NumberRangeParameterEditorUI.DisplayRangeStop - Enum in org.hkijena.jipipe.extensions.parameters.library.ranges
 
NumberRangeParameterEditorUI.ThumbRenderer - Class in org.hkijena.jipipe.extensions.parameters.library.ranges
 
NumberRangeParameterEditorUI.TrackRenderer - Class in org.hkijena.jipipe.extensions.parameters.library.ranges
 
NumberRangeParameterGenerator - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Generator that creates instances of Number.
NumberRangeParameterGenerator() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.NumberRangeParameterGenerator
 
NumberRangeParameterSettings - Annotation Type in org.hkijena.jipipe.extensions.parameters.library.ranges
 
NumericDivideFunctionOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
NumericDivideFunctionOperator(int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.NumericDivideFunctionOperator
 
NumericEulerConstant - Class in org.hkijena.jipipe.extensions.expressions.constants
 
NumericEulerConstant() - Constructor for class org.hkijena.jipipe.extensions.expressions.constants.NumericEulerConstant
 
NumericExponentFunctionOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
NumericExponentFunctionOperator() - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.NumericExponentFunctionOperator
 
NumericFunctionExpression - Class in org.hkijena.jipipe.extensions.expressions
A parameter that is intended to set or scale an integer
NumericFunctionExpression() - Constructor for class org.hkijena.jipipe.extensions.expressions.NumericFunctionExpression
 
NumericFunctionExpression(String) - Constructor for class org.hkijena.jipipe.extensions.expressions.NumericFunctionExpression
 
NumericFunctionExpression(NumericFunctionExpression) - Constructor for class org.hkijena.jipipe.extensions.expressions.NumericFunctionExpression
 
NumericFunctionExpression.VariablesInfo - Class in org.hkijena.jipipe.extensions.expressions
 
NumericFunctionOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
NumericFunctionOperator(String, int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.NumericFunctionOperator
 
NumericGreaterThanOrEqualPredicateOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
NumericGreaterThanOrEqualPredicateOperator(int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.NumericGreaterThanOrEqualPredicateOperator
 
NumericGreaterThanPredicateOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
NumericGreaterThanPredicateOperator(int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.NumericGreaterThanPredicateOperator
 
NumericInfinityConstant - Class in org.hkijena.jipipe.extensions.expressions.constants
 
NumericInfinityConstant() - Constructor for class org.hkijena.jipipe.extensions.expressions.constants.NumericInfinityConstant
 
NumericLessThanOrEqualPredicateOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
NumericLessThanOrEqualPredicateOperator(int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.NumericLessThanOrEqualPredicateOperator
 
NumericLessThanPredicateOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
NumericLessThanPredicateOperator(int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.NumericLessThanPredicateOperator
 
NumericModuloFunctionOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
NumericModuloFunctionOperator(int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.NumericModuloFunctionOperator
 
NumericMultiplyFunctionOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
NumericMultiplyFunctionOperator(int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.NumericMultiplyFunctionOperator
 
NumericNaNInfinityConstant - Class in org.hkijena.jipipe.extensions.expressions.constants
 
NumericNaNInfinityConstant() - Constructor for class org.hkijena.jipipe.extensions.expressions.constants.NumericNaNInfinityConstant
 
NumericNegativeInfinityConstant - Class in org.hkijena.jipipe.extensions.expressions.constants
 
NumericNegativeInfinityConstant() - Constructor for class org.hkijena.jipipe.extensions.expressions.constants.NumericNegativeInfinityConstant
 
NumericOrStringFunctionOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
NumericOrStringFunctionOperator(String, int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.NumericOrStringFunctionOperator
 
NumericPiConstant - Class in org.hkijena.jipipe.extensions.expressions.constants
 
NumericPiConstant() - Constructor for class org.hkijena.jipipe.extensions.expressions.constants.NumericPiConstant
 
NumericPredicateOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
NumericPredicateOperator(String, int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.NumericPredicateOperator
 
NumericTauConstant - Class in org.hkijena.jipipe.extensions.expressions.constants
 
NumericTauConstant() - Constructor for class org.hkijena.jipipe.extensions.expressions.constants.NumericTauConstant
 
numPoints - Variable in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines
 

O

objectListToNumericVector(Collection<?>) - Static method in class org.hkijena.jipipe.utils.VectorUtils
 
objectToBase64(Object) - Static method in class org.hkijena.jipipe.utils.SerializationUtils
Serializes a Java object into its binary representation (via ObjectOutputStream) as base64
objectToBinaryFile(Object, Path) - Static method in class org.hkijena.jipipe.utils.SerializationUtils
Serializes a Java object into a file via ObjectOutputStream
objectToDouble(Object) - Static method in class org.hkijena.jipipe.utils.StringUtils
 
objectToJsonString(Object) - Static method in class org.hkijena.jipipe.utils.SerializationUtils
Serializes an object to a JSON string Must be serializable via the Jackson JSON library.
objectToPython(Object) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
Converts the object into valid Python code
OccurrencesColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Converts each entry into a the number of occurrences within the column
OccurrencesColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.OccurrencesColumnOperation
 
OCEAN_BLACK - Static variable in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
 
OCEAN_BLACK - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
OCEAN_DROP - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
offset - Variable in class org.hkijena.jipipe.extensions.ilastik.utils.GridCoordinates.Block
 
ok - Variable in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
OKCancelDialog - Class in org.hkijena.jipipe.utils
 
OKCancelDialog(Component, String, Component, String) - Constructor for class org.hkijena.jipipe.utils.OKCancelDialog
 
OME_ACCESSOR_STORAGE - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.ImageJAlgorithmsPlugin
Contains registered OME accessors
OMEAccessorParameter - Class in org.hkijena.jipipe.extensions.imagejalgorithms.parameters
 
OMEAccessorParameter() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OMEAccessorParameter
 
OMEAccessorParameter(OMEAccessorParameter) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OMEAccessorParameter
 
OMEAccessorParameterEditorUI - Class in org.hkijena.jipipe.extensions.imagejalgorithms.parameters
 
OMEAccessorParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OMEAccessorParameterEditorUI
Creates new instance
OMEAccessorStorage - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
OMEAccessorStorage() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.OMEAccessorStorage
 
OMEAccessorTemplate - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
OMEAccessorTemplate(String, String, Method, JIPipeDynamicParameterCollection, List<String>) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.OMEAccessorTemplate
 
OMEAccessorTypeEnumParameter - Class in org.hkijena.jipipe.extensions.imagejalgorithms.parameters
 
OMEAccessorTypeEnumParameter() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OMEAccessorTypeEnumParameter
 
OMEAccessorTypeEnumParameter(OMEAccessorTypeEnumParameter) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OMEAccessorTypeEnumParameter
 
OMEColorMode - Enum in org.hkijena.jipipe.extensions.imagejdatatypes.parameters
Wrapper around Bioformats color modes
OMEExport(OMEImageData, Path, OMEExporterSettings) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.OMEImageData
Copy of the run method in Exporter that allows configuration via a parameter object
OMEExporterSettings - Class in org.hkijena.jipipe.extensions.imagejdatatypes.parameters
 
OMEExporterSettings() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEExporterSettings
 
OMEExporterSettings(OMEExporterSettings) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEExporterSettings
 
OMEImageData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes
Data that is a representation of all information saved in Bio-Formats
OMEImageData(ImagePlus, ROIListData, OMEXMLMetadata) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.OMEImageData
 
OMEImageDataPreview - Class in org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis
 
OMEImageDataPreview(JIPipeProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableMetadataRow, JIPipeExportedDataAnnotation) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.OMEImageDataPreview
Creates a new renderer
OMEImageFromImagePlus - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources
 
OMEImageFromImagePlus(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.OMEImageFromImagePlus
 
OMEImageFromImagePlus(OMEImageFromImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.OMEImageFromImagePlus
 
OMEImageFromImageWindowImageJImporter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.compat
 
OMEImageFromImageWindowImageJImporter() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.compat.OMEImageFromImageWindowImageJImporter
 
OMEImageResultImportRun - Class in org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis
 
OMEImageResultImportRun(JIPipeDataSlot, JIPipeDataTableMetadataRow, Path, String, String, String, JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.OMEImageResultImportRun
 
OMEImageToImagePlusTypeConverter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms
 
OMEImageToImagePlusTypeConverter() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.OMEImageToImagePlusTypeConverter
 
OMEImageToImageWindowImageJExporter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.compat
 
OMEImageToImageWindowImageJExporter() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.compat.OMEImageToImageWindowImageJExporter
 
OmeImageToOMEXMLTypeConverter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms
 
OmeImageToOMEXMLTypeConverter() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.OmeImageToOMEXMLTypeConverter
 
OMEImageToROITypeConverter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms
 
OMEImageToROITypeConverter() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.OMEImageToROITypeConverter
 
OMEMetadataToTableAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome
 
OMEMetadataToTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm
 
OMEMetadataToTableAlgorithm(OMEMetadataToTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm
 
OMEMetadataToTableAlgorithm.Entry - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome
 
OMEROAnnotationReferenceData - Class in org.hkijena.jipipe.extensions.omero.datatypes
Data that stores a reference to an OMERO project
OMEROAnnotationReferenceData() - Constructor for class org.hkijena.jipipe.extensions.omero.datatypes.OMEROAnnotationReferenceData
 
OMEROAnnotationReferenceData(long) - Constructor for class org.hkijena.jipipe.extensions.omero.datatypes.OMEROAnnotationReferenceData
 
OMEROAnnotationReferenceData(AnnotationData, OMEROCredentialsEnvironment) - Constructor for class org.hkijena.jipipe.extensions.omero.datatypes.OMEROAnnotationReferenceData
 
OMEROCreateDatasetAlgorithm - Class in org.hkijena.jipipe.extensions.omero.nodes.manage
 
OMEROCreateDatasetAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.manage.OMEROCreateDatasetAlgorithm
 
OMEROCreateDatasetAlgorithm(OMEROCreateDatasetAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.manage.OMEROCreateDatasetAlgorithm
 
OMEROCredentialsEnvironment - Class in org.hkijena.jipipe.extensions.omero
 
OMEROCredentialsEnvironment() - Constructor for class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment
 
OMEROCredentialsEnvironment(OMEROCredentialsEnvironment) - Constructor for class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment
 
OMEROCredentialsEnvironment.List - Class in org.hkijena.jipipe.extensions.omero
 
OMERODatasetReferenceData - Class in org.hkijena.jipipe.extensions.omero.datatypes
 
OMERODatasetReferenceData() - Constructor for class org.hkijena.jipipe.extensions.omero.datatypes.OMERODatasetReferenceData
 
OMERODatasetReferenceData(long) - Constructor for class org.hkijena.jipipe.extensions.omero.datatypes.OMERODatasetReferenceData
 
OMERODatasetReferenceData(DatasetData, OMEROCredentialsEnvironment) - Constructor for class org.hkijena.jipipe.extensions.omero.datatypes.OMERODatasetReferenceData
 
OMERODatasetReferenceDataSource - Class in org.hkijena.jipipe.extensions.omero.nodes.datasources
 
OMERODatasetReferenceDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMERODatasetReferenceDataSource
 
OMERODatasetReferenceDataSource(OMERODatasetReferenceDataSource) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMERODatasetReferenceDataSource
 
OMEROGateway - Class in org.hkijena.jipipe.extensions.omero.util
 
OMEROGateway(LoginCredentials, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.util.OMEROGateway
 
OMEROGroupReferenceData - Class in org.hkijena.jipipe.extensions.omero.datatypes
Data that stores a reference to an OMERO project
OMEROGroupReferenceData() - Constructor for class org.hkijena.jipipe.extensions.omero.datatypes.OMEROGroupReferenceData
 
OMEROGroupReferenceData(long) - Constructor for class org.hkijena.jipipe.extensions.omero.datatypes.OMEROGroupReferenceData
 
OMEROGroupReferenceDataSource - Class in org.hkijena.jipipe.extensions.omero.nodes.datasources
 
OMEROGroupReferenceDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROGroupReferenceDataSource
 
OMEROGroupReferenceDataSource(OMEROGroupReferenceDataSource) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROGroupReferenceDataSource
 
OMEROImageReferenceData - Class in org.hkijena.jipipe.extensions.omero.datatypes
 
OMEROImageReferenceData() - Constructor for class org.hkijena.jipipe.extensions.omero.datatypes.OMEROImageReferenceData
 
OMEROImageReferenceData(long) - Constructor for class org.hkijena.jipipe.extensions.omero.datatypes.OMEROImageReferenceData
 
OMEROImageReferenceData(ImageData, OMEROCredentialsEnvironment) - Constructor for class org.hkijena.jipipe.extensions.omero.datatypes.OMEROImageReferenceData
 
OMEROImageReferenceDataSource - Class in org.hkijena.jipipe.extensions.omero.nodes.datasources
 
OMEROImageReferenceDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROImageReferenceDataSource
 
OMEROImageReferenceDataSource(OMEROImageReferenceDataSource) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROImageReferenceDataSource
 
OMEROImageUploader - Class in org.hkijena.jipipe.extensions.omero.util
 
OMEROImageUploader(LoginCredentials, String, long, SecurityContext, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.util.OMEROImageUploader
 
OMEROKeyValuePairToAnnotationImporter - Class in org.hkijena.jipipe.extensions.omero.parameters
 
OMEROKeyValuePairToAnnotationImporter() - Constructor for class org.hkijena.jipipe.extensions.omero.parameters.OMEROKeyValuePairToAnnotationImporter
 
OMEROKeyValuePairToAnnotationImporter(OMEROKeyValuePairToAnnotationImporter) - Constructor for class org.hkijena.jipipe.extensions.omero.parameters.OMEROKeyValuePairToAnnotationImporter
 
OMEROListDatasetsAlgorithm - Class in org.hkijena.jipipe.extensions.omero.nodes.navigate
 
OMEROListDatasetsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListDatasetsAlgorithm
 
OMEROListDatasetsAlgorithm(OMEROListDatasetsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListDatasetsAlgorithm
 
OMEROListGroupsAlgorithm - Class in org.hkijena.jipipe.extensions.omero.nodes.navigate
 
OMEROListGroupsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListGroupsAlgorithm
 
OMEROListGroupsAlgorithm(OMEROListGroupsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListGroupsAlgorithm
 
OMEROListImagesAlgorithm - Class in org.hkijena.jipipe.extensions.omero.nodes.navigate
 
OMEROListImagesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListImagesAlgorithm
 
OMEROListImagesAlgorithm(OMEROListImagesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListImagesAlgorithm
 
OMEROListProjectsAlgorithm - Class in org.hkijena.jipipe.extensions.omero.nodes.navigate
 
OMEROListProjectsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListProjectsAlgorithm
 
OMEROListProjectsAlgorithm(OMEROListProjectsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListProjectsAlgorithm
 
OMEROPlugin - Class in org.hkijena.jipipe.extensions.omero
Provides data types dor handling strings
OMEROPlugin() - Constructor for class org.hkijena.jipipe.extensions.omero.OMEROPlugin
 
OMEROProjectReferenceData - Class in org.hkijena.jipipe.extensions.omero.datatypes
Data that stores a reference to an OMERO project
OMEROProjectReferenceData() - Constructor for class org.hkijena.jipipe.extensions.omero.datatypes.OMEROProjectReferenceData
 
OMEROProjectReferenceData(long) - Constructor for class org.hkijena.jipipe.extensions.omero.datatypes.OMEROProjectReferenceData
 
OMEROProjectReferenceData(ProjectData, OMEROCredentialsEnvironment) - Constructor for class org.hkijena.jipipe.extensions.omero.datatypes.OMEROProjectReferenceData
 
OMEROProjectReferenceDataSource - Class in org.hkijena.jipipe.extensions.omero.nodes.datasources
 
OMEROProjectReferenceDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROProjectReferenceDataSource
 
OMEROProjectReferenceDataSource(OMEROProjectReferenceDataSource) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROProjectReferenceDataSource
 
OMEROSettings - Class in org.hkijena.jipipe.extensions.omero
 
OMEROSettings() - Constructor for class org.hkijena.jipipe.extensions.omero.OMEROSettings
 
OMEROTagToAnnotationImporter - Class in org.hkijena.jipipe.extensions.omero.parameters
 
OMEROTagToAnnotationImporter() - Constructor for class org.hkijena.jipipe.extensions.omero.parameters.OMEROTagToAnnotationImporter
 
OMEROTagToAnnotationImporter(OMEROTagToAnnotationImporter) - Constructor for class org.hkijena.jipipe.extensions.omero.parameters.OMEROTagToAnnotationImporter
 
OMEROToJIPipeLogger - Class in org.hkijena.jipipe.extensions.omero.util
 
OMEROToJIPipeLogger(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.util.OMEROToJIPipeLogger
 
OMEROUploadToJIPipeLogger - Class in org.hkijena.jipipe.extensions.omero.util
 
OMEROUploadToJIPipeLogger(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.util.OMEROUploadToJIPipeLogger
 
OMEROUtils - Class in org.hkijena.jipipe.extensions.omero.util
 
OMEROUtils() - Constructor for class org.hkijena.jipipe.extensions.omero.util.OMEROUtils
 
OMETIFFCompression - Enum in org.hkijena.jipipe.extensions.imagejdatatypes.parameters
Available compression methods
OmniposeAlgorithm - Class in org.hkijena.jipipe.extensions.omnipose.algorithms
 
OmniposeAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
OmniposeAlgorithm(OmniposeAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
OmniposeEasyInstaller - Class in org.hkijena.jipipe.extensions.omnipose.installers
 
OmniposeEasyInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.omnipose.installers.OmniposeEasyInstaller
 
OmniposeModel - Enum in org.hkijena.jipipe.extensions.omnipose
 
OmniposePlugin - Class in org.hkijena.jipipe.extensions.omnipose
 
OmniposePlugin() - Constructor for class org.hkijena.jipipe.extensions.omnipose.OmniposePlugin
 
OmniposePretrainedModel - Enum in org.hkijena.jipipe.extensions.omnipose
 
OmniposeSegmentationThresholdSettings - Class in org.hkijena.jipipe.extensions.omnipose.parameters
 
OmniposeSegmentationThresholdSettings() - Constructor for class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationThresholdSettings
 
OmniposeSegmentationThresholdSettings(OmniposeSegmentationThresholdSettings) - Constructor for class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationThresholdSettings
 
OmniposeSegmentationTweaksSettings - Class in org.hkijena.jipipe.extensions.omnipose.parameters
 
OmniposeSegmentationTweaksSettings() - Constructor for class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationTweaksSettings
 
OmniposeSegmentationTweaksSettings(OmniposeSegmentationTweaksSettings) - Constructor for class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationTweaksSettings
 
OmniposeSettings - Class in org.hkijena.jipipe.extensions.omnipose
 
OmniposeSettings() - Constructor for class org.hkijena.jipipe.extensions.omnipose.OmniposeSettings
 
OmniposeTrainingAlgorithm - Class in org.hkijena.jipipe.extensions.omnipose.algorithms
 
OmniposeTrainingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
OmniposeTrainingAlgorithm(OmniposeTrainingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
OmniposeTrainingTweaksSettings - Class in org.hkijena.jipipe.extensions.omnipose.parameters
 
OmniposeTrainingTweaksSettings() - Constructor for class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeTrainingTweaksSettings
 
OmniposeTrainingTweaksSettings(OmniposeTrainingTweaksSettings) - Constructor for class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeTrainingTweaksSettings
 
onAlgorithmCacheOutputSelectedEvent(JIPipeAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEvent) - Method in interface org.hkijena.jipipe.ui.cache.JIPipeAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEventListener
 
onBaseDirectoryChanged(JIPipeGraphNode.BaseDirectoryChangedEvent) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeGraphNode.BaseDirectoryChangedEventListener
 
onCacheClearedEvent(JIPipeCache.ClearedEvent) - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache.ClearedEventListener
 
onCacheModified(JIPipeCache.ModifiedEvent) - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache.ModifiedEventListener
 
onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantUI
Triggered when the cache was updated
onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.ui.cache.JIPipeAlgorithmCacheBrowserUI
 
onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheBrowserUI
Triggered when the cache was updated
onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
 
onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheManagerUI
Triggered when the cache was updated
onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableUI
Triggered when the cache was updated
onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableUI
Triggered when the cache was updated
onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerUI
 
onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties.JIPipePipelineSingleAlgorithmSelectionOverviewPanelUI
 
onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.properties.JIPipeSingleCompartmentSelectionOverviewPanelUI
 
onCacheModified(JIPipeCache.ModifiedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
onCacheStoredEvent(JIPipeCache.StoredEvent) - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache.StoredEventListener
 
onCancelled(ProcessUtils.RunCancellationWatchdog.CancelledEvent) - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationExecuteWatchdog
 
onCancelled(ProcessUtils.RunCancellationWatchdog.CancelledEvent) - Method in interface org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog.CancelledEventListener
 
onColorButtonColorChosen(ColorChooserButton.ColorChosenEvent) - Method in interface org.hkijena.jipipe.ui.components.ColorChooserButton.ColorChosenEventListener
 
onComponentMouseClicked(MouseClickedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.EllipseMaskDrawer2DTool
 
onComponentMouseClicked(MouseClickedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.FloodFillMaskDrawer2DTool
 
onComponentMouseClicked(MouseClickedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PencilMaskDrawer2DTool
 
onComponentMouseClicked(MouseClickedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PolygonMaskDrawer2DTool
 
onComponentMouseClicked(MouseClickedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.RectangleMaskDrawer2DTool
 
onComponentMouseClicked(MouseClickedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIPicker2DTool
 
onComponentMouseClicked(MouseClickedEvent) - Method in interface org.hkijena.jipipe.utils.ui.events.MouseClickedEventListener
 
onComponentMouseDragged(MouseDraggedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PencilMaskDrawer2DTool
 
onComponentMouseDragged(MouseDraggedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIPicker2DTool
 
onComponentMouseDragged(MouseDraggedEvent) - Method in interface org.hkijena.jipipe.utils.ui.events.MouseDraggedEventListener
 
onComponentMouseEntered(MouseEnteredEvent) - Method in interface org.hkijena.jipipe.utils.ui.events.MouseEnteredEventListener
 
onComponentMouseExited(MouseExitedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.EllipseMaskDrawer2DTool
 
onComponentMouseExited(MouseExitedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PencilMaskDrawer2DTool
 
onComponentMouseExited(MouseExitedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PolygonMaskDrawer2DTool
 
onComponentMouseExited(MouseExitedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.RectangleMaskDrawer2DTool
 
onComponentMouseExited(MouseExitedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIPicker2DTool
 
onComponentMouseExited(MouseExitedEvent) - Method in interface org.hkijena.jipipe.utils.ui.events.MouseExitedEventListener
 
onComponentMouseMoved(MouseMovedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.EllipseMaskDrawer2DTool
 
onComponentMouseMoved(MouseMovedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PencilMaskDrawer2DTool
 
onComponentMouseMoved(MouseMovedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PolygonMaskDrawer2DTool
 
onComponentMouseMoved(MouseMovedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.RectangleMaskDrawer2DTool
 
onComponentMouseMoved(MouseMovedEvent) - Method in interface org.hkijena.jipipe.utils.ui.events.MouseMovedEventListener
 
onComponentMousePressed(MousePressedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PencilMaskDrawer2DTool
 
onComponentMousePressed(MousePressedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIPicker2DTool
 
onComponentMousePressed(MousePressedEvent) - Method in interface org.hkijena.jipipe.utils.ui.events.MousePressedEventListener
 
onComponentMouseReleased(MouseReleasedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PencilMaskDrawer2DTool
 
onComponentMouseReleased(MouseReleasedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIPicker2DTool
 
onComponentMouseReleased(MouseReleasedEvent) - Method in interface org.hkijena.jipipe.utils.ui.events.MouseReleasedEventListener
 
onDataTypePickerDataTypeDeselected(JIPipeDataTypePicker.DataTypeDeselectedEvent) - Method in interface org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.DataTypeDeselectedEventListener
 
onDataTypePickerDataTypeSelected(JIPipeDataTypePicker.DataTypeSelectedEvent) - Method in interface org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.DataTypeSelectedEventListener
 
onDataTypePickerSelectedDataTypesChanged(JIPipeDataTypePicker.SelectedDataTypesChangedEvent) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRefParameterEditorUI
 
onDataTypePickerSelectedDataTypesChanged(JIPipeDataTypePicker.SelectedDataTypesChangedEvent) - Method in interface org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.SelectedDataTypesChangedEventListener
 
onDefaultNodeUIActionRequested(JIPipeGraphNodeUI.DefaultNodeUIActionRequestedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.JIPipePipelineGraphEditorUI
 
onDefaultNodeUIActionRequested(JIPipeGraphNodeUI.DefaultNodeUIActionRequestedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.JIPipeCompartmentsGraphEditorUI
Should be triggered when a user double-clicks a graph node to open it in the graph editor
onDefaultNodeUIActionRequested(JIPipeGraphNodeUI.DefaultNodeUIActionRequestedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
onDefaultNodeUIActionRequested(JIPipeGraphNodeUI.DefaultNodeUIActionRequestedEvent) - Method in interface org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI.DefaultNodeUIActionRequestedEventListener
 
onDeserialized(JsonNode, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
 
onDeserialized(JsonNode, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Override this method to add operations to be run after deserialization from JSON
onDeserialized(JsonNode, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
onDeserialized(JsonNode, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
onDeserialized(JsonNode, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
onDeserialized(JsonNode, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
onDeserialized(JsonNode, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
onDeserialized(JsonNode, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
onDeserialized(JsonNode, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingPythonScriptAlgorithm
 
onDeserialized(JsonNode, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingPythonScriptAlgorithm
 
onDeserialized(JsonNode, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.extensions.python.algorithms.PythonScriptAlgorithm
 
onDeserialized(JsonNode, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm
 
onDeserialized(JsonNode, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.extensions.r.algorithms.IteratingRScriptAlgorithm
 
onDeserialized(JsonNode, JIPipeValidationReport, JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.extensions.r.algorithms.MergingRScriptAlgorithm
 
onDocumentTabRenamed(DocumentTabPane.TabRenamedEvent) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.DocumentTabComponent
 
onDocumentTabRenamed(DocumentTabPane.TabRenamedEvent) - Method in interface org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.TabRenamedEventListener
 
onDynamicParameterCollectionBeforeAddParameter(JIPipeDynamicParameterCollection.BeforeAddParameterEvent) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.BeforeAddParameterEventListener
 
oneSliceIndexToOneStackIndex(int, int, int, ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Stack index (one-based)
oneSliceIndexToOneStackIndex(int, int, int, int, int, int) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Stack index (one-based)
oneSliceIndexToOneStackIndex(ImagePlus) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
Interprets this index as one-based index and returns the appropriate stack index
oneSliceIndexToOneStackIndex(int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
Interprets this index as one-based index and returns the appropriate stack index
oneToZero() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
 
onFinished(JIPipeRunnable.FinishedEvent) - Method in interface org.hkijena.jipipe.api.JIPipeRunnable
Called when this runnable finishes
onFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToFilesByMetadataExporterRun
 
onFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToOutputExporterRun
 
onFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToZIPExporterRun
 
onFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun
 
onFormPanelHoverHelp(FormPanel.HoverHelpEvent) - Method in interface org.hkijena.jipipe.ui.components.FormPanel.HoverHelpEventListener
 
onGCEvent(JIPipeGraphRunGCGraph.GCEvent) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun
 
onGCEvent(JIPipeGraphRunGCGraph.GCEvent) - Method in interface org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph.GCEventListener
 
onGraphCanvasNodeSelectionChanged(JIPipeGraphCanvasUI.NodeSelectionChangedEvent) - Method in interface org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.NodeSelectionChangedEventListener
 
onGraphCanvasNodeSelectionChanged(JIPipeGraphCanvasUI.NodeSelectionChangedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
onGraphCanvasUpdated(JIPipeGraphCanvasUI.GraphCanvasUpdatedEvent) - Method in interface org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.GraphCanvasUpdatedEventListener
 
onGraphCanvasUpdated(JIPipeGraphCanvasUI.GraphCanvasUpdatedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorMinimap
 
onGraphChanged(JIPipeGraph.GraphChangedEvent) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
Triggered when the wrapped graph changed
onGraphChanged(JIPipeGraph.GraphChangedEvent) - Method in class org.hkijena.jipipe.api.JIPipeProject
Triggered when the compartment graph is changed
onGraphChanged(JIPipeGraph.GraphChangedEvent) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeGraph.GraphChangedEventListener
 
onGraphChanged(JIPipeGraph.GraphChangedEvent) - Method in class org.hkijena.jipipe.ui.bookmarks.BookmarkListPanel
 
onGraphChanged(JIPipeGraph.GraphChangedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
onGraphChanged(JIPipeGraph.GraphChangedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
onGraphChanged(JIPipeGraph.GraphChangedEvent) - Method in class org.hkijena.jipipe.ui.parameterreference.GraphNodeParameterReferenceGroupCollectionEditorUI
 
onHighlightColorChanged() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawer2DTool
Triggered when the highlight color was changed
onHighlightColorChanged() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PencilMaskDrawer2DTool
 
onHistoryChangedEvent(JIPipeHistoryJournal.HistoryChangedEvent) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal.HistoryChangedEventListener
 
onHistoryChangedEvent(JIPipeHistoryJournal.HistoryChangedEvent) - Method in class org.hkijena.jipipe.ui.history.HistoryJournalUI
 
onImageChanged() - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
onImageChanged() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
onImageChanged() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin
Called when the current image is changed
onImageChanged() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.AnnotationInfoPlugin2D
 
onImageChanged() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.CalibrationPlugin2D
 
onImageChanged() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.LUTManagerPlugin2D
 
onImageChanged() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
onImageChanged() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
onImageChanged() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.AnnotationInfoPlugin3D
 
onImageChanged() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.CalibrationPlugin3D
 
onImageChanged() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.LUTManagerPlugin3D
 
onImageChanged() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.OpacityManagerPlugin3D
 
onImageChanged() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D
 
onImageContentReady(List<Content>) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
onImageContentReady(List<Content>) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
onImageContentReady(List<Content>) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin3D
 
onImageContentReady(List<Content>) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.OpacityManagerPlugin3D
 
onImageContentReady(List<Content>) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D
 
onImageViewerCanvasPixelHover(ImageViewerPanelCanvas2D.PixelHoverEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.PixelInfoPlugin2D
 
onImageViewerCanvasPixelHover(ImageViewerPanelCanvas2D.PixelHoverEvent) - Method in interface org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.PixelHoverEventListener
 
onImageViewerCanvasToolChanged(ImageViewerPanelCanvas2D.ToolChangedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
onImageViewerCanvasToolChanged(ImageViewerPanelCanvas2D.ToolChangedEvent) - Method in interface org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.ToolChangedEventListener
 
onInterrupted(JIPipeRunnable.InterruptedEvent) - Method in interface org.hkijena.jipipe.api.JIPipeRunnable
Called when this runnable is interrupted
onInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataExporterRun
 
onInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToFilesByMetadataExporterRun
 
onInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToOutputExporterRun
 
onInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToZIPExporterRun
 
onInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun
 
onJIPipeDatatypeRegistered(JIPipeService.DatatypeRegisteredEvent) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Triggered when a datatype was registered.
onJIPipeDatatypeRegistered(JIPipeService.DatatypeRegisteredEvent) - Method in class org.hkijena.jipipe.extensions.plots.PlotsPlugin
 
onJIPipeDatatypeRegistered(JIPipeService.DatatypeRegisteredEvent) - Method in interface org.hkijena.jipipe.JIPipeService.DatatypeRegisteredEventListener
 
onJIPipeExtensionContentAdded(JIPipeService.ExtensionContentAddedEvent) - Method in interface org.hkijena.jipipe.JIPipeService.ExtensionContentAddedEventListener
 
onJIPipeExtensionContentAdded(JIPipeService.ExtensionContentAddedEvent) - Method in class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExtensionContentListUI
 
onJIPipeExtensionContentRemoved(JIPipeService.ExtensionContentRemovedEvent) - Method in interface org.hkijena.jipipe.JIPipeService.ExtensionContentRemovedEventListener
 
onJIPipeExtensionContentRemoved(JIPipeService.ExtensionContentRemovedEvent) - Method in class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExtensionContentListUI
Triggered when content was removed
onJIPipeExtensionContentRemoved(JIPipeService.ExtensionContentRemovedEvent) - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWorkbench
 
onJIPipeExtensionDiscovered(JIPipeService.ExtensionDiscoveredEvent) - Method in interface org.hkijena.jipipe.JIPipeService.ExtensionDiscoveredEventListener
 
onJIPipeExtensionDiscovered(JIPipeService.ExtensionDiscoveredEvent) - Method in class org.hkijena.jipipe.ui.components.SplashScreen
 
onJIPipeExtensionRegistered(JIPipeService.ExtensionRegisteredEvent) - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionLoaderPlugin
 
onJIPipeExtensionRegistered(JIPipeService.ExtensionRegisteredEvent) - Method in interface org.hkijena.jipipe.JIPipeService.ExtensionRegisteredEventListener
 
onJIPipeExtensionRegistered(JIPipeService.ExtensionRegisteredEvent) - Method in class org.hkijena.jipipe.ui.extensions.JIPipePluginValidityCheckerPanel
 
onJIPipeExtensionRegistered(JIPipeService.ExtensionRegisteredEvent) - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWorkbench
Informs the user about registered extensions.
onJIPipeExtensionRegistered(JIPipeService.ExtensionRegisteredEvent) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
onJIPipeNodeInfoRegistered(JIPipeService.NodeInfoRegisteredEvent) - Method in interface org.hkijena.jipipe.JIPipeService.NodeInfoRegisteredEventListener
 
onJIPipeNodeInfoRegistered(JIPipeService.NodeInfoRegisteredEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
onJIPipeNodeTemplatesRefreshed(NodeTemplatesRefreshedEvent) - Method in class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplateBox
 
onJIPipeNodeTemplatesRefreshed(NodeTemplatesRefreshedEvent) - Method in class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplateMenu
 
onJIPipeNodeTemplatesRefreshed(NodeTemplatesRefreshedEvent) - Method in interface org.hkijena.jipipe.extensions.nodetemplate.NodeTemplatesRefreshedEventListener
 
onJIPipeNodeTemplatesRefreshed(NodeTemplatesRefreshedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties.NodeExamplesUI
 
onJIPipeTemplatesUpdated(JIPipeProjectTemplateRegistry.TemplatesUpdatedEvent) - Method in interface org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry.TemplatesUpdatedEventListener
 
onJIPipeTemplatesUpdated(JIPipeProjectTemplateRegistry.TemplatesUpdatedEvent) - Method in class org.hkijena.jipipe.ui.documentation.WelcomePanel
 
onJIPipeTemplatesUpdated(JIPipeProjectTemplateRegistry.TemplatesUpdatedEvent) - Method in class org.hkijena.jipipe.ui.project.JIPipeTemplateSelectionDialog
 
onLogCleared(JIPipeRunnableLogsCollection.LogClearedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeLogViewer
 
onLogCleared(JIPipeRunnableLogsCollection.LogClearedEvent) - Method in interface org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection.LogClearedEventListener
 
onLogEntryAdded(JIPipeRunnableLogsCollection.LogEntryAddedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeLogViewer
 
onLogEntryAdded(JIPipeRunnableLogsCollection.LogEntryAddedEvent) - Method in interface org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection.LogEntryAddedEventListener
 
onLogUpdated(JIPipeRunnableLogsCollection.LogUpdatedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeLogViewer
 
onLogUpdated(JIPipeRunnableLogsCollection.LogUpdatedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsButton
 
onLogUpdated(JIPipeRunnableLogsCollection.LogUpdatedEvent) - Method in interface org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection.LogUpdatedEventListener
 
onMaskDrawerPluginMaskChanged(MaskDrawerPlugin2D.MaskChangedEvent) - Method in interface org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D.MaskChangedEventListener
 
onMaskDrawerPluginMaskChanged(MaskDrawerPlugin2D.MaskChangedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MeasurementDrawerPlugin2D
 
onNodeAdded(JIPipeGraph.NodeAddedEvent) - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseUpdater
 
onNodeAdded(JIPipeGraph.NodeAddedEvent) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeAddedEventListener
 
onNodeConnected(JIPipeGraph.NodeConnectedEvent) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeConnectedEventListener
 
onNodeConnected(JIPipeGraph.NodeConnectedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
onNodeConnected(JIPipeGraph.NodeConnectedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
onNodeDisconnected(JIPipeGraph.NodeDisconnectedEvent) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeDisconnectedEventListener
 
onNodeDisconnected(JIPipeGraph.NodeDisconnectedEvent) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantUI
 
onNodeDisconnected(JIPipeGraph.NodeDisconnectedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
onNodeInfoPickerNodeInfoDeselectedEvent(JIPipeNodeInfoPicker.NodeInfoDeselectedEvent) - Method in interface org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.NodeInfoDeselectedEventListener
 
onNodeInfoPickerNodeInfoSelectedEvent(JIPipeNodeInfoPicker.NodeInfoSelectedEvent) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeNodeInfoRefParameterEditorUI
 
onNodeInfoPickerNodeInfoSelectedEvent(JIPipeNodeInfoPicker.NodeInfoSelectedEvent) - Method in interface org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.NodeInfoSelectedEventListener
 
onNodeInfoPickerSelectedInfosChanged(JIPipeNodeInfoPicker.SelectedInfosChangedEvent) - Method in interface org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.SelectedInfosChangedEventListener
 
onNodeRemoved(JIPipeGraph.NodeRemovedEvent) - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseUpdater
 
onNodeRemoved(JIPipeGraph.NodeRemovedEvent) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeGraph.NodeRemovedEventListener
 
onNodeSlotsChanged(JIPipeGraphNode.NodeSlotsChangedEvent) - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration
 
onNodeSlotsChanged(JIPipeGraphNode.NodeSlotsChangedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Should be triggered when an JIPipeGraphNode's slots are changed.
onNodeSlotsChanged(JIPipeGraphNode.NodeSlotsChangedEvent) - Method in interface org.hkijena.jipipe.api.nodes.JIPipeGraphNode.NodeSlotsChangedEventListener
 
onNodeSlotsChanged(JIPipeGraphNode.NodeSlotsChangedEvent) - Method in class org.hkijena.jipipe.extensions.parameters.api.graph.SlotMapParameterCollection
Triggered when algorithm slots are changed
onNodeSlotsChanged(JIPipeGraphNode.NodeSlotsChangedEvent) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantUI
Triggered when the slots were changed
onNodeSlotsChanged(JIPipeGraphNode.NodeSlotsChangedEvent) - Method in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmSettingsPanelIOEditor
 
onNodeSlotsChanged(JIPipeGraphNode.NodeSlotsChangedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
onNodeSlotsChanged(JIPipeGraphNode.NodeSlotsChangedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.properties.JIPipeSlotEditorUI
Triggered when the algorithm slots are changed
onNodeUIActionRequested(JIPipeGraphNodeUI.NodeUIActionRequestedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.JIPipePipelineGraphEditorUI
Listens to events of algorithms requesting some action
onNodeUIActionRequested(JIPipeGraphNodeUI.NodeUIActionRequestedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.JIPipeCompartmentsGraphEditorUI
Listens to events of algorithms requesting some action
onNodeUIActionRequested(JIPipeGraphNodeUI.NodeUIActionRequestedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
onNodeUIActionRequested(JIPipeGraphNodeUI.NodeUIActionRequestedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
onNodeUIActionRequested(JIPipeGraphNodeUI.NodeUIActionRequestedEvent) - Method in interface org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI.NodeUIActionRequestedEventListener
 
onNodeUISelected(JIPipeGraphCanvasUI.NodeUISelectedEvent) - Method in interface org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.NodeUISelectedEventListener
 
onNodeUISelected(JIPipeGraphCanvasUI.NodeUISelectedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
onNotificationDismissed(JIPipeNotificationInbox.DismissedEvent) - Method in interface org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.DismissedEventListener
 
onNotificationDismissed(JIPipeNotificationInbox.DismissedEvent) - Method in class org.hkijena.jipipe.ui.notifications.GenericNotificationInboxUI
 
onNotificationDismissed(JIPipeNotificationInbox.DismissedEvent) - Method in class org.hkijena.jipipe.ui.notifications.WorkbenchNotificationInboxUI
 
onNotificationInboxUpdated(JIPipeNotificationInbox.UpdatedEvent) - Method in interface org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.UpdatedEventListener
 
onNotificationInboxUpdated(JIPipeNotificationInbox.UpdatedEvent) - Method in class org.hkijena.jipipe.ui.notifications.GenericNotificationButton
 
onNotificationInboxUpdated(JIPipeNotificationInbox.UpdatedEvent) - Method in class org.hkijena.jipipe.ui.notifications.NotificationButton
 
onNotificationPushed(JIPipeNotificationInbox.PushedEvent) - Method in interface org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.PushedEventListener
 
onNotificationPushed(JIPipeNotificationInbox.PushedEvent) - Method in class org.hkijena.jipipe.ui.notifications.GenericNotificationInboxUI
 
onNotificationPushed(JIPipeNotificationInbox.PushedEvent) - Method in class org.hkijena.jipipe.ui.notifications.WorkbenchNotificationInboxUI
 
onOverlayAdded(Object) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
onOverlayAdded(Object) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D
 
onOverlayAdded(Object) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
onOverlayAdded(Object) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D
 
onOverlayAdded(Object) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D
 
onOverlayAdded(Object) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin
Called if an overlay was added
onOverlayAdded(Object) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
onOverlayRemoved(Object) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
onOverlayRemoved(Object) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D
 
onOverlayRemoved(Object) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
onOverlayRemoved(Object) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D
 
onOverlayRemoved(Object) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D
 
onOverlayRemoved(Object) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin
Called if an overlay was removed
onOverlayRemoved(Object) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
onOverlaysCleared() - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
onOverlaysCleared() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
onOverlaysCleared() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin
Called if the overlays were cleared
onOverlaysCleared() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseUpdater
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Triggered when a parameter is changed within the slot configuration.
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection
Triggered when a parameter of this collection was changed
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterChangedEventListener
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.StringOrDoubleParameterEditorUI
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantDataTableUI
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantUI
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.bookmarks.BookmarkListPanel
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.cache.JIPipeCachedDataDisplayCacheControl
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.components.DataPreviewControlUI
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.components.RecentJsonExtensionsMenu
Triggered when the list should be changed
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.components.RecentProjectsMenu
Triggered when the list should be changed
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableUI
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableUI
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableUI
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerDataTableUI
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.documentation.RecentProjectsListPanel
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExtensionContentListUI
Triggered when a name was changed
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties.JIPipePipelineSingleAlgorithmSelectionOverviewPanelUI
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.properties.JIPipeSingleCompartmentSelectionOverviewPanelUI
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeAnnotationGraphNodeUI
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
Should be triggered when an algorithm's name parameter is changed
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.properties.JIPipeSlotEditorUI
Triggered when the custom name of the slot definition is changed
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionInfoUI
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.parameterreference.GraphNodeParameterReferenceGroupCollectionEditorUI
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.parameters.DynamicParameterEditorDialog
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
Listens for changes in parameters
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.parameters.ParameterExplorerWindow
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotAvailableDataManagerUI
Triggered when a plot builder parameter is changed
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesBuilder
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesListEditorUI
Triggered when the plot builder's parameters are changed
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
Triggered when a parameter was changed
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeMergedResultDataSlotTableUI
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotTableUI
 
onParameterChanged(JIPipeParameterCollection.ParameterChangedEvent) - Method in class org.hkijena.jipipe.ui.settings.JIPipeProjectOverviewUI
 
onParameterReferencesChanged(ParameterReferencesChangedEvent) - Method in interface org.hkijena.jipipe.api.grouping.events.ParameterReferencesChangedEventListener
 
onParameterReferencesChanged(ParameterReferencesChangedEvent) - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
onParameterReferencesChanged(ParameterReferencesChangedEvent) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection
 
onParameterReferencesChanged(ParameterReferencesChangedEvent) - Method in class org.hkijena.jipipe.ui.parameterreference.GraphNodeParameterReferenceGroupCollectionEditorUI
 
onParameterReferencesChanged(ParameterReferencesChangedEvent) - Method in class org.hkijena.jipipe.ui.settings.JIPipeProjectInfoParameters
 
onParameterStructureChanged(JIPipeParameterCollection.ParameterStructureChangedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Should be triggered when an JIPipeGraphNode's parameter structure is changed.
onParameterStructureChanged(JIPipeParameterCollection.ParameterStructureChangedEvent) - Method in class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection
Triggered when the parameter structure of this collection was changed
onParameterStructureChanged(JIPipeParameterCollection.ParameterStructureChangedEvent) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterStructureChangedEventListener
 
onParameterStructureChanged(JIPipeParameterCollection.ParameterStructureChangedEvent) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
 
onParameterStructureChanged(JIPipeParameterCollection.ParameterStructureChangedEvent) - Method in class org.hkijena.jipipe.ui.parameterreference.GraphNodeParameterReferenceGroupCollectionEditorUI
Triggered when the parameter structure was changed
onParameterStructureChanged(JIPipeParameterCollection.ParameterStructureChangedEvent) - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
Triggered when the parameter structure was changed
onParameterTableModelChangedEvent(ParameterTable.ModelChangedEvent) - Method in interface org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ModelChangedEventListener
 
onParameterTableModelChangedEvent(ParameterTable.ModelChangedEvent) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableEditorUI
 
onParameterUIChanged(JIPipeParameterCollection.ParameterUIChangedEvent) - Method in class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection
Triggered when the parameter UI structure of this collection was changed
onParameterUIChanged(JIPipeParameterCollection.ParameterUIChangedEvent) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterUIChangedEventListener
 
onParameterUIChanged(JIPipeParameterCollection.ParameterUIChangedEvent) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
 
onParameterUIChanged(JIPipeParameterCollection.ParameterUIChangedEvent) - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
Triggered when the parameter UI should be updated
onPluginManagerUpdateSitesFailed(JIPipeModernPluginManager.UpdateSitesFailedEvent) - Method in interface org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager.UpdateSitesFailedEventListener
 
onPluginManagerUpdateSitesFailed(JIPipeModernPluginManager.UpdateSitesFailedEvent) - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManagerUI
 
onPluginManagerUpdateSitesReady(JIPipeModernPluginManager.UpdateSitesReadyEvent) - Method in interface org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager.UpdateSitesReadyEventListener
 
onPluginManagerUpdateSitesReady(JIPipeModernPluginManager.UpdateSitesReadyEvent) - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManagerUI
 
onPluginManagerUpdateSitesReady(JIPipeModernPluginManager.UpdateSitesReadyEvent) - Method in class org.hkijena.jipipe.ui.ijupdater.MissingRegistrationUpdateSiteResolver
 
onPluginManagerUpdateSitesReady(JIPipeModernPluginManager.UpdateSitesReadyEvent) - Method in class org.hkijena.jipipe.ui.project.InvalidProjectDependenciesInfoDialog
 
onProgressStatusUpdated(JIPipeProgressInfo.StatusUpdatedEvent) - Method in interface org.hkijena.jipipe.api.JIPipeProgressInfo.StatusUpdatedEventListener
 
onProgressStatusUpdated(JIPipeProgressInfo.StatusUpdatedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunWorker
 
onProjectCompartmentAdded(JIPipeProject.CompartmentAddedEvent) - Method in interface org.hkijena.jipipe.api.JIPipeProject.CompartmentAddedEventListener
 
onProjectCompartmentRemoved(JIPipeProject.CompartmentRemovedEvent) - Method in interface org.hkijena.jipipe.api.JIPipeProject.CompartmentRemovedEventListener
 
onProjectCompartmentRemoved(JIPipeProject.CompartmentRemovedEvent) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
Triggered when a compartment is deleted.
onRecentProjectListProjectOpened(RecentProjectsListPanel.ProjectOpenedEvent) - Method in interface org.hkijena.jipipe.ui.documentation.RecentProjectsListPanel.ProjectOpenedEventListener
 
onRunnableEnqueued(JIPipeRunnable.EnqueuedEvent) - Method in interface org.hkijena.jipipe.api.JIPipeRunnable.EnqeuedEventListener
 
onRunnableEnqueued(JIPipeRunnable.EnqueuedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
 
onRunnableEnqueued(JIPipeRunnable.EnqueuedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton.RunMenuItem
Triggered when a worker is enqueued
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.api.environments.ExternalEnvironmentParameterEditorUI
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in interface org.hkijena.jipipe.api.JIPipeRunnable.FinishedEventListener
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceParameterEditorUI
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.backups.BackupManagerPanel
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantUI
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.cache.JIPipeAlgorithmCacheBrowserUI
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.cache.JIPipeCachedDataDisplayCacheControl
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.components.icons.JIPipeRunnerQueueThrobberIcon
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerUI
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.extensions.ExtensionItemActionButton
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.extensions.ExtensionItemLogoPanel
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties.QuickRunSetupUI
Triggered when a worker is finished
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeImageJPluginManager
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.ijupdater.MissingRegistrationUpdateSiteResolver
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunExecuterUI
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
Triggered when a worker is finished
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
 
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton.RunMenuItem
Triggered when a worker is finished
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunQueueNotifier
Triggered when a worker is finished
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunQueuePanelUI
Triggered when a scheduled worker is finished
onRunnableFinished(JIPipeRunnable.FinishedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunSettingsUI
Triggered when the run is finished
onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in interface org.hkijena.jipipe.api.JIPipeRunnable.InterruptedEventListener
 
onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantUI
 
onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.cache.JIPipeAlgorithmCacheBrowserUI
 
onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.cache.JIPipeCachedDataDisplayCacheControl
 
onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.components.icons.JIPipeRunnerQueueThrobberIcon
 
onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerUI
 
onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager
 
onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties.QuickRunSetupUI
Triggered when a worker is interrupted
onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeImageJPluginManager
 
onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.ijupdater.MissingRegistrationUpdateSiteResolver
 
onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunExecuterUI
 
onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection
 
onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
Triggered when a worker is interrupted
onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
 
onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton.RunMenuItem
Triggered when a worker is interrupted
onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunQueueNotifier
Triggered when a worker is interrupted
onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunQueuePanelUI
 
onRunnableInterrupted(JIPipeRunnable.InterruptedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunSettingsUI
Triggered when the run is interrupted
onRunnableProgress(JIPipeRunnable.ProgressEvent) - Method in interface org.hkijena.jipipe.api.JIPipeRunnable.ProgressEventListener
 
onRunnableProgress(JIPipeRunnable.ProgressEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunExecuterUI
 
onRunnableProgress(JIPipeRunnable.ProgressEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
Triggered when a worker reports progress
onRunnableProgress(JIPipeRunnable.ProgressEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
 
onRunnableProgress(JIPipeRunnable.ProgressEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton.RunMenuItem
Triggered when a worker reports progress
onRunnableProgress(JIPipeRunnable.ProgressEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunQueuePanelUI
Triggered when a worker reports progress
onRunnableStarted(JIPipeRunnable.StartedEvent) - Method in interface org.hkijena.jipipe.api.JIPipeRunnable.StartedEventListener
 
onRunnableStarted(JIPipeRunnable.StartedEvent) - Method in class org.hkijena.jipipe.ui.cache.JIPipeCachedDataDisplayCacheControl
 
onRunnableStarted(JIPipeRunnable.StartedEvent) - Method in class org.hkijena.jipipe.ui.components.icons.JIPipeRunnerQueueThrobberIcon
 
onRunnableStarted(JIPipeRunnable.StartedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunExecuterUI
 
onRunnableStarted(JIPipeRunnable.StartedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
 
onRunnableStarted(JIPipeRunnable.StartedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton.RunMenuItem
Triggered when a worker is started
onRunnableStarted(JIPipeRunnable.StartedEvent) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunQueuePanelUI
 
onScheduledActivateExtension(JIPipeExtensionRegistry.ScheduledActivateExtensionEvent) - Method in interface org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry.ScheduledActivateExtensionEventListener
 
onScheduledActivateExtension(JIPipeExtensionRegistry.ScheduledActivateExtensionEvent) - Method in class org.hkijena.jipipe.ui.extensions.ExtensionItemActionButton
 
onScheduledActivateExtension(JIPipeExtensionRegistry.ScheduledActivateExtensionEvent) - Method in class org.hkijena.jipipe.ui.extensions.ExtensionItemLogoPanel
 
onScheduledActivateExtension(JIPipeExtensionRegistry.ScheduledActivateExtensionEvent) - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager
 
onScheduledDeactivateExtension(JIPipeExtensionRegistry.ScheduledDeactivateExtensionEvent) - Method in interface org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry.ScheduledDeactivateExtensionEventListener
 
onScheduledDeactivateExtension(JIPipeExtensionRegistry.ScheduledDeactivateExtensionEvent) - Method in class org.hkijena.jipipe.ui.extensions.ExtensionItemActionButton
 
onScheduledDeactivateExtension(JIPipeExtensionRegistry.ScheduledDeactivateExtensionEvent) - Method in class org.hkijena.jipipe.ui.extensions.ExtensionItemLogoPanel
 
onScheduledDeactivateExtension(JIPipeExtensionRegistry.ScheduledDeactivateExtensionEvent) - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager
 
onSearchBoxSelectedEvent(NodeDatabaseSearchBox.SelectedEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
onSearchBoxSelectedEvent(NodeDatabaseSearchBox.SelectedEvent) - Method in interface org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox.SelectedEventListener
 
onSliceChanged(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D
 
onSliceChanged(boolean) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D
 
onSliceChanged(boolean) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D
 
onSliceChanged(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin2D
Called when the current slice is changed
onSliceChanged(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.CalibrationPlugin2D
 
onSliceChanged(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
onSliceChanged(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
onSlotConfigurationChanged(JIPipeSlotConfiguration.SlotConfigurationChangedEvent) - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration.SlotConfigurationChangedEventListener
 
onSlotConfigurationChanged(JIPipeSlotConfiguration.SlotConfigurationChangedEvent) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Should be triggered when a slot is added to the slot configuration
onThumbnailGenerated(JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEvent) - Method in interface org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEventListener
 
onThumbnailGenerated(JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEvent) - Method in class org.hkijena.jipipe.ui.cache.JIPipeCachedDataPreview
 
onToolActivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.EllipseMaskDrawer2DTool
 
onToolActivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.FloodFillMaskDrawer2DTool
 
onToolActivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MouseMaskDrawer2DTool
 
onToolActivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PencilMaskDrawer2DTool
 
onToolActivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PolygonMaskDrawer2DTool
 
onToolActivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.RectangleMaskDrawer2DTool
 
onToolActivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIPicker2DTool
 
onToolActivate(ImageViewerPanelCanvas2D) - Method in interface org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2DTool
Executed on activation of this tool
onToolDeactivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.EllipseMaskDrawer2DTool
 
onToolDeactivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.FloodFillMaskDrawer2DTool
 
onToolDeactivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MouseMaskDrawer2DTool
 
onToolDeactivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PencilMaskDrawer2DTool
 
onToolDeactivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PolygonMaskDrawer2DTool
 
onToolDeactivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.RectangleMaskDrawer2DTool
 
onToolDeactivate(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIPicker2DTool
 
onToolDeactivate(ImageViewerPanelCanvas2D) - Method in interface org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2DTool
Executed on deactivation of this tool
onViewerActivated() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin3D
 
onViewerUniverseReady() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin3D
 
onViewPortZoomChanged(ZoomViewPort.ZoomChangedEvent) - Method in interface org.hkijena.jipipe.ui.components.ZoomViewPort.ZoomChangedEventListener
 
onWindowClosed(WindowClosedEvent) - Method in class org.hkijena.jipipe.JIPipeLauncher.WindowWatcher
 
onWindowClosed(WindowClosedEvent) - Method in interface org.hkijena.jipipe.ui.events.WindowClosedEventListener
 
onWindowOpened(WindowOpenedEvent) - Method in class org.hkijena.jipipe.JIPipeLauncher.WindowWatcher
 
onWindowOpened(WindowOpenedEvent) - Method in interface org.hkijena.jipipe.ui.events.WindowOpenedEventListener
 
OpacityManagerPlugin3D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins3d
 
OpacityManagerPlugin3D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins3d.OpacityManagerPlugin3D
 
open(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage
 
open(String) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage
Opens the specified file element as stream.
open(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage
Opens the specified file element as stream.
open(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage
 
openApplicationSettings(String) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
openAuthorInfoWindow(Component, Collection<JIPipeAuthorMetadata>, JIPipeAuthorMetadata) - Static method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
Opens a list of authors in a window that displays information about them.
openCacheBrowser() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
OpenCacheBrowserInWindowUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
OpenCacheBrowserInWindowUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.OpenCacheBrowserInWindowUIContextAction
 
OpenCLKernelScript - Class in org.hkijena.jipipe.extensions.clij2.parameters
A OpenCL kernel script
OpenCLKernelScript() - Constructor for class org.hkijena.jipipe.extensions.clij2.parameters.OpenCLKernelScript
Creates a new instance
OpenCLKernelScript(OpenCLKernelScript) - Constructor for class org.hkijena.jipipe.extensions.clij2.parameters.OpenCLKernelScript
Makes a copy
OpenContainingFolderDataImportOperation - Class in org.hkijena.jipipe.extensions.core.data
Import operation that opens the containing folder.
OpenContainingFolderDataImportOperation() - Constructor for class org.hkijena.jipipe.extensions.core.data.OpenContainingFolderDataImportOperation
 
openContextMenu(Point) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Opens the context menu at the location.
OpenContextMenuAction - Class in org.hkijena.jipipe.ui.grapheditor.general.actions
 
OpenContextMenuAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.actions.OpenContextMenuAction
 
openDirectories(Component, FileChooserSettings.LastDirectoryKey, String) - Static method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
Lets the user choose multiple directories
openDirectory(Component, FileChooserSettings.LastDirectoryKey, String) - Static method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
Lets the user choose a directory
openErrorDialog(JIPipeWorkbench, Component, Exception) - Static method in class org.hkijena.jipipe.utils.UIUtils
Opens a dialog showing an exception
openFile(Component, FileChooserSettings.LastDirectoryKey, String, FileNameExtensionFilter...) - Static method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
Lets the user choose a file
openFileInNative(Path) - Static method in class org.hkijena.jipipe.utils.UIUtils
Opens a website with given URL
openFiles(Component, FileChooserSettings.LastDirectoryKey, String) - Static method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
Lets the user choose multiple files
openGroupNodeGraph(JIPipeWorkbench, NodeGroup, boolean) - Static method in class org.hkijena.jipipe.ui.grouping.JIPipeNodeGroupUI
Opens the graph editor for specified compartment
OpenImageJConsoleTool - Class in org.hkijena.jipipe.extensions.tools
 
OpenImageJConsoleTool(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.tools.OpenImageJConsoleTool
Creates a new instance
OpenImageJTool - Class in org.hkijena.jipipe.extensions.tools
 
OpenImageJTool(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.tools.OpenImageJTool
Creates a new instance
OpenInImageJDataDisplay - Class in org.hkijena.jipipe.extensions.imagejdatatypes.display
 
OpenInImageJDataDisplay() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.display.OpenInImageJDataDisplay
 
OpenInNativeApplicationDataImportOperation - Class in org.hkijena.jipipe.extensions.core.data
 
OpenInNativeApplicationDataImportOperation(String, String, String[]) - Constructor for class org.hkijena.jipipe.extensions.core.data.OpenInNativeApplicationDataImportOperation
 
OpenInNativeApplicationDataImportOperation(String...) - Constructor for class org.hkijena.jipipe.extensions.core.data.OpenInNativeApplicationDataImportOperation
 
openInNewTab(JIPipeWorkbench, String) - Static method in class org.hkijena.jipipe.ui.texteditor.JIPipeTextEditor
 
openNewToolBoxWindow(JIPipeWorkbench) - Static method in class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplateBox
 
openNewToolBoxWindow(JIPipeWorkbench, Component) - Static method in class org.hkijena.jipipe.extensions.nodetoolboxtool.NodeToolBox
 
openNewWindow(JIPipeWorkbench) - Static method in class org.hkijena.jipipe.ui.backups.BackupManagerPanel
 
openNotificationsDialog(JIPipeWorkbench, Component, JIPipeNotificationInbox, String, String, boolean) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
openPath(Component, FileChooserSettings.LastDirectoryKey, String) - Static method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
Lets the user choose a file or directory
OpenPathDataOperation - Class in org.hkijena.jipipe.extensions.filesystem.resultanalysis
 
OpenPathDataOperation() - Constructor for class org.hkijena.jipipe.extensions.filesystem.resultanalysis.OpenPathDataOperation
 
openPaths(Component, FileChooserSettings.LastDirectoryKey, String) - Static method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
Lets the user choose multiple files or directories
OpenPlotInJIPipeDataOperation - Class in org.hkijena.jipipe.extensions.plots.ui.resultanalysis
 
OpenPlotInJIPipeDataOperation() - Constructor for class org.hkijena.jipipe.extensions.plots.ui.resultanalysis.OpenPlotInJIPipeDataOperation
 
openProject(Path) - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
Opens a project from a file Asks the user if it should be opened in this or a new window
openProject() - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
Displays a file chooser where the user can open a project.
openProject(Path, boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
Opens a project from a file or folder Asks the user if it should replace the currently displayed project
openProject() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
Opens a file chooser where the user can select a project file
openProjectAndOutput() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
Opens a file chooser where the user can select a result folder
openProjectReport() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
OpenResultsTableInImageJDataOperation - Class in org.hkijena.jipipe.extensions.tables.display
 
OpenResultsTableInImageJDataOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.display.OpenResultsTableInImageJDataOperation
 
OpenResultsTableInJIPipeTabDataOperation - Class in org.hkijena.jipipe.extensions.tables.display
 
OpenResultsTableInJIPipeTabDataOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.display.OpenResultsTableInJIPipeTabDataOperation
 
openROIs(IMetadata, ImagePlus[]) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIHandler
Look for ROIs in the given OMEXMLMetadata; if any are present, apply them to the given images and display them in the ROI manager.
openROIs(IMetadata, ImagePlus[], boolean) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIHandler
Opens the rois and converts them into ImageJ Rois.
OpenTextInJIPipeDataOperation - Class in org.hkijena.jipipe.extensions.core.data
 
OpenTextInJIPipeDataOperation(String...) - Constructor for class org.hkijena.jipipe.extensions.core.data.OpenTextInJIPipeDataOperation
 
openValidityReportDialog(JIPipeWorkbench, Component, JIPipeValidationReport, String, String, boolean) - Static method in class org.hkijena.jipipe.utils.UIUtils
Opens a dialog showing a validity report
openWebsite(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Opens a website with given URL
openWindow(JIPipeProjectWorkbench, String) - Static method in class org.hkijena.jipipe.ui.datatracer.DataTracerUI
 
openWindow(JIPipeWorkbench, String) - Static method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
Creates a new plot editor in a new window
openWindow(JIPipeWorkbench, ResultsTableData, String) - Static method in class org.hkijena.jipipe.ui.tableeditor.TableEditor
Shows table data in a new window
OPERATOR_AND_SYMBOL - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_AND_TEXT - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_ELEMENT_ACCESS_SYMBOL - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_ELEMENT_ACCESS_TEXT - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_NEGATE_SYMBOL - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_NEGATE_TEXT - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_NUMERIC_DIVIDE - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_NUMERIC_EQUALS - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_NUMERIC_EQUALS_TEXT - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_NUMERIC_EXPONENT - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_NUMERIC_GREATER_THAN - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_NUMERIC_GREATER_THAN_OR_EQUAL - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_NUMERIC_LESS_THAN - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_NUMERIC_LESS_THAN_OR_EQUAL - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_NUMERIC_MINUS - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_NUMERIC_MODULO - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_NUMERIC_MULTIPLY - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_NUMERIC_NEGATE - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_NUMERIC_NEGATE_HIGH - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_NUMERIC_STRING_PLUS - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_NUMERIC_UNEQUALS - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_NUMERIC_UNEQUALS_TEXT - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_OR_SYMBOL - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_OR_TEXT - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_PAIR - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_STATEMENT - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_STRING_CONTAINS - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_STRING_CONTAINS2 - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_VARIABLE_EXISTS - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_VARIABLE_RESOLVE - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OPERATOR_XOR_TEXT - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
OperatorSelectorList - Class in org.hkijena.jipipe.extensions.expressions
Panel that allows the user to select an ExpressionOperator
OperatorSelectorList(ExpressionEvaluator) - Constructor for class org.hkijena.jipipe.extensions.expressions.OperatorSelectorList
 
OperatorSelectorList.ExpressionOperatorRenderer - Class in org.hkijena.jipipe.extensions.expressions
 
opticFlow(FloatProcessor, FloatProcessor, FloatProcessor, FloatProcessor) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm
 
opticFlow(FloatProcessor, FloatProcessor, FloatProcessor, FloatProcessor) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm
 
opticFlow(FloatProcessor, FloatProcessor, FloatProcessor, FloatProcessor) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm
 
optional() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeInputSlot
 
OptionalBitDepth - Enum in org.hkijena.jipipe.extensions.imagejdatatypes.util
Enum of ImageJ bit depths
OptionalBitDepthEnumItemInfo - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
 
OptionalBitDepthEnumItemInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.OptionalBitDepthEnumItemInfo
 
OptionalBooleanParameter - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.optional
Optional Boolean
OptionalBooleanParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalBooleanParameter
Creates a new instance
OptionalBooleanParameter(OptionalBooleanParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalBooleanParameter
Creates a copy
OptionalByteParameter - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.optional
Optional Byte
OptionalByteParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalByteParameter
Creates a new instance
OptionalByteParameter(OptionalByteParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalByteParameter
Creates a copy
OptionalColorMapParameter - Class in org.hkijena.jipipe.extensions.parameters.library.colors
Optional ColorMap
OptionalColorMapParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.colors.OptionalColorMapParameter
Creates a new instance
OptionalColorMapParameter(OptionalColorMapParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.colors.OptionalColorMapParameter
Creates a copy
OptionalColorParameter - Class in org.hkijena.jipipe.extensions.parameters.library.colors
Optional Color
OptionalColorParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.colors.OptionalColorParameter
Creates a new instance
OptionalColorParameter(Color, boolean) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.colors.OptionalColorParameter
 
OptionalColorParameter(OptionalColorParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.colors.OptionalColorParameter
Creates a copy
OptionalDataAnnotationNameParameter - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.optional
Parameter used for creating annotations
OptionalDataAnnotationNameParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalDataAnnotationNameParameter
 
OptionalDataAnnotationNameParameter(OptionalStringParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalDataAnnotationNameParameter
 
OptionalDataAnnotationNameParameter(String, boolean) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalDataAnnotationNameParameter
 
OptionalDataInfoRefParameter - Class in org.hkijena.jipipe.extensions.parameters.library.references
 
OptionalDataInfoRefParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.OptionalDataInfoRefParameter
 
OptionalDataInfoRefParameter(boolean, JIPipeDataInfoRef) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.OptionalDataInfoRefParameter
 
OptionalDataInfoRefParameter(OptionalDataInfoRefParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.OptionalDataInfoRefParameter
 
OptionalDoubleParameter - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.optional
Optional Double
OptionalDoubleParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalDoubleParameter
Creates a new instance
OptionalDoubleParameter(OptionalDoubleParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalDoubleParameter
Creates a copy
OptionalDoubleParameter(double, boolean) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalDoubleParameter
 
OptionalFloatParameter - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.optional
Optional Float
OptionalFloatParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalFloatParameter
Creates a new instance
OptionalFloatParameter(boolean, float) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalFloatParameter
Creates a new instance
OptionalFloatParameter(OptionalFloatParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalFloatParameter
Creates a copy
OptionalIntegerParameter - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.optional
Optional Integer
OptionalIntegerParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalIntegerParameter
Creates a new instance
OptionalIntegerParameter(boolean, int) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalIntegerParameter
 
OptionalIntegerParameter(OptionalIntegerParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalIntegerParameter
Creates a copy
OptionalIntegerRange - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.optional
 
OptionalIntegerRange() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalIntegerRange
 
OptionalIntegerRange(IntegerRange, boolean) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalIntegerRange
 
OptionalIntegerRange(OptionalIntegerRange) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalIntegerRange
 
OptionalIntModificationParameter - Class in org.hkijena.jipipe.extensions.parameters.library.roi
OptionalIntModificationParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.OptionalIntModificationParameter
 
OptionalIntModificationParameter(OptionalIntModificationParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.OptionalIntModificationParameter
 
OptionalJIPipeExpressionParameter - Class in org.hkijena.jipipe.extensions.expressions
 
OptionalJIPipeExpressionParameter() - Constructor for class org.hkijena.jipipe.extensions.expressions.OptionalJIPipeExpressionParameter
 
OptionalJIPipeExpressionParameter(boolean, String) - Constructor for class org.hkijena.jipipe.extensions.expressions.OptionalJIPipeExpressionParameter
 
OptionalJIPipeExpressionParameter(OptionalParameter<JIPipeExpressionParameter>) - Constructor for class org.hkijena.jipipe.extensions.expressions.OptionalJIPipeExpressionParameter
 
OptionalJIPipePythonAdapterLibraryEnvironment - Class in org.hkijena.jipipe.extensions.python.adapter
OptionalJIPipePythonAdapterLibraryEnvironment() - Constructor for class org.hkijena.jipipe.extensions.python.adapter.OptionalJIPipePythonAdapterLibraryEnvironment
 
OptionalJIPipePythonAdapterLibraryEnvironment(JIPipePythonAdapterLibraryEnvironment) - Constructor for class org.hkijena.jipipe.extensions.python.adapter.OptionalJIPipePythonAdapterLibraryEnvironment
 
OptionalJIPipePythonAdapterLibraryEnvironment(OptionalJIPipePythonAdapterLibraryEnvironment) - Constructor for class org.hkijena.jipipe.extensions.python.adapter.OptionalJIPipePythonAdapterLibraryEnvironment
 
OptionalLongParameter - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.optional
Optional Long
OptionalLongParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalLongParameter
Creates a new instance
OptionalLongParameter(OptionalLongParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalLongParameter
Creates a copy
OptionalNodeInfoRefParameter - Class in org.hkijena.jipipe.extensions.parameters.library.references
 
OptionalNodeInfoRefParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.OptionalNodeInfoRefParameter
 
OptionalNodeInfoRefParameter(OptionalNodeInfoRefParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.OptionalNodeInfoRefParameter
 
OptionalOMEROCredentialsEnvironment - Class in org.hkijena.jipipe.extensions.omero
 
OptionalOMEROCredentialsEnvironment() - Constructor for class org.hkijena.jipipe.extensions.omero.OptionalOMEROCredentialsEnvironment
 
OptionalOMEROCredentialsEnvironment(OptionalParameter<OMEROCredentialsEnvironment>) - Constructor for class org.hkijena.jipipe.extensions.omero.OptionalOMEROCredentialsEnvironment
 
OptionalParameter<T> - Class in org.hkijena.jipipe.extensions.parameters.api.optional
A parameter that is optional
OptionalParameter(Class<T>) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameter
 
OptionalParameter(OptionalParameter<T>) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameter
Produces a shallow copy You have to implement deep content copying yourself
OptionalParameter.Deserializer<T> - Class in org.hkijena.jipipe.extensions.parameters.api.optional
Deserializes the parameter
OptionalParameter.Serializer - Class in org.hkijena.jipipe.extensions.parameters.api.optional
Serializes the parameter
OptionalParameterContentAccess<T> - Class in org.hkijena.jipipe.extensions.parameters.api.optional
Parameter access for the key entry in PairParameter
OptionalParameterContentAccess(JIPipeParameterAccess, OptionalParameter<T>) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
Creates a new instance
OptionalParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.api.optional
Generic parameter for OptionalParameter
OptionalParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterEditorUI
Creates new instance
OptionalPathParameter - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.optional
Optional Path
OptionalPathParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalPathParameter
Creates a new instance
OptionalPathParameter(Path, boolean) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalPathParameter
 
OptionalPathParameter(OptionalPathParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalPathParameter
Creates a copy
OptionalProcessEnvironment - Class in org.hkijena.jipipe.extensions.processes
An optional ProcessEnvironment
OptionalProcessEnvironment() - Constructor for class org.hkijena.jipipe.extensions.processes.OptionalProcessEnvironment
 
OptionalProcessEnvironment(ProcessEnvironment) - Constructor for class org.hkijena.jipipe.extensions.processes.OptionalProcessEnvironment
 
OptionalProcessEnvironment(OptionalProcessEnvironment) - Constructor for class org.hkijena.jipipe.extensions.processes.OptionalProcessEnvironment
 
OptionalPythonEnvironment - Class in org.hkijena.jipipe.extensions.python
An optional PythonEnvironment
OptionalPythonEnvironment() - Constructor for class org.hkijena.jipipe.extensions.python.OptionalPythonEnvironment
 
OptionalPythonEnvironment(PythonEnvironment) - Constructor for class org.hkijena.jipipe.extensions.python.OptionalPythonEnvironment
 
OptionalPythonEnvironment(OptionalPythonEnvironment) - Constructor for class org.hkijena.jipipe.extensions.python.OptionalPythonEnvironment
 
OptionalQuantity - Class in org.hkijena.jipipe.extensions.parameters.library.quantities
 
OptionalQuantity() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.quantities.OptionalQuantity
 
OptionalQuantity(Quantity, boolean) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.quantities.OptionalQuantity
 
OptionalQuantity(OptionalQuantity) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.quantities.OptionalQuantity
 
OptionalREnvironment - Class in org.hkijena.jipipe.extensions.r
An optional REnvironment
OptionalREnvironment() - Constructor for class org.hkijena.jipipe.extensions.r.OptionalREnvironment
 
OptionalREnvironment(REnvironment) - Constructor for class org.hkijena.jipipe.extensions.r.OptionalREnvironment
 
OptionalREnvironment(OptionalREnvironment) - Constructor for class org.hkijena.jipipe.extensions.r.OptionalREnvironment
 
OptionalShortParameter - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.optional
Optional Short
OptionalShortParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalShortParameter
Creates a new instance
OptionalShortParameter(OptionalShortParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalShortParameter
Creates a copy
OptionalStringParameter - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.optional
Optional String
OptionalStringParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalStringParameter
Creates a new instance
OptionalStringParameter(OptionalStringParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalStringParameter
Creates a copy
OptionalStringParameter(String, boolean) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalStringParameter
 
OptionalTextAnnotationNameParameter - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.optional
Parameter used for creating annotations
OptionalTextAnnotationNameParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter
 
OptionalTextAnnotationNameParameter(OptionalStringParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter
 
OptionalTextAnnotationNameParameter(String, boolean) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter
 
OPTIONS - Static variable in class org.hkijena.jipipe.ui.components.markdown.MarkdownReader
 
orElse(double) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalDoubleParameter
 
orElse(int) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalIntegerParameter
 
orElse(Path, Path) - Static method in class org.hkijena.jipipe.utils.PathUtils
Returns the first path if it exists or the alternative path if it doesn't
orElse(Object, String) - Static method in class org.hkijena.jipipe.utils.StringUtils
Returns the string if its not null or empty or the alternative
org.hkijena.jipipe - package org.hkijena.jipipe
 
org.hkijena.jipipe.api - package org.hkijena.jipipe.api
 
org.hkijena.jipipe.api.annotation - package org.hkijena.jipipe.api.annotation
 
org.hkijena.jipipe.api.backups - package org.hkijena.jipipe.api.backups
 
org.hkijena.jipipe.api.cache - package org.hkijena.jipipe.api.cache
 
org.hkijena.jipipe.api.compartments - package org.hkijena.jipipe.api.compartments
 
org.hkijena.jipipe.api.compartments.algorithms - package org.hkijena.jipipe.api.compartments.algorithms
 
org.hkijena.jipipe.api.compartments.datatypes - package org.hkijena.jipipe.api.compartments.datatypes
 
org.hkijena.jipipe.api.compat - package org.hkijena.jipipe.api.compat
 
org.hkijena.jipipe.api.compat.ui - package org.hkijena.jipipe.api.compat.ui
 
org.hkijena.jipipe.api.data - package org.hkijena.jipipe.api.data
 
org.hkijena.jipipe.api.data.context - package org.hkijena.jipipe.api.data.context
 
org.hkijena.jipipe.api.data.serialization - package org.hkijena.jipipe.api.data.serialization
 
org.hkijena.jipipe.api.data.sources - package org.hkijena.jipipe.api.data.sources
 
org.hkijena.jipipe.api.data.storage - package org.hkijena.jipipe.api.data.storage
 
org.hkijena.jipipe.api.data.thumbnails - package org.hkijena.jipipe.api.data.thumbnails
 
org.hkijena.jipipe.api.data.utils - package org.hkijena.jipipe.api.data.utils
 
org.hkijena.jipipe.api.environments - package org.hkijena.jipipe.api.environments
 
org.hkijena.jipipe.api.events - package org.hkijena.jipipe.api.events
 
org.hkijena.jipipe.api.grapheditortool - package org.hkijena.jipipe.api.grapheditortool
 
org.hkijena.jipipe.api.grouping - package org.hkijena.jipipe.api.grouping
 
org.hkijena.jipipe.api.grouping.events - package org.hkijena.jipipe.api.grouping.events
 
org.hkijena.jipipe.api.grouping.parameters - package org.hkijena.jipipe.api.grouping.parameters
 
org.hkijena.jipipe.api.history - package org.hkijena.jipipe.api.history
 
org.hkijena.jipipe.api.looping - package org.hkijena.jipipe.api.looping
 
org.hkijena.jipipe.api.nodes - package org.hkijena.jipipe.api.nodes
 
org.hkijena.jipipe.api.nodes.algorithm - package org.hkijena.jipipe.api.nodes.algorithm
 
org.hkijena.jipipe.api.nodes.annotation - package org.hkijena.jipipe.api.nodes.annotation
 
org.hkijena.jipipe.api.nodes.categories - package org.hkijena.jipipe.api.nodes.categories
 
org.hkijena.jipipe.api.nodes.database - package org.hkijena.jipipe.api.nodes.database
 
org.hkijena.jipipe.api.nodes.infos - package org.hkijena.jipipe.api.nodes.infos
 
org.hkijena.jipipe.api.nodes.iterationstep - package org.hkijena.jipipe.api.nodes.iterationstep
 
org.hkijena.jipipe.api.notifications - package org.hkijena.jipipe.api.notifications
 
org.hkijena.jipipe.api.parameters - package org.hkijena.jipipe.api.parameters
 
org.hkijena.jipipe.api.registries - package org.hkijena.jipipe.api.registries
 
org.hkijena.jipipe.api.run - package org.hkijena.jipipe.api.run
 
org.hkijena.jipipe.api.runtimepartitioning - package org.hkijena.jipipe.api.runtimepartitioning
 
org.hkijena.jipipe.api.validation - package org.hkijena.jipipe.api.validation
 
org.hkijena.jipipe.api.validation.contexts - package org.hkijena.jipipe.api.validation.contexts
 
org.hkijena.jipipe.extensions - package org.hkijena.jipipe.extensions
 
org.hkijena.jipipe.extensions.annotation - package org.hkijena.jipipe.extensions.annotation
 
org.hkijena.jipipe.extensions.annotation.algorithms - package org.hkijena.jipipe.extensions.annotation.algorithms
 
org.hkijena.jipipe.extensions.annotation.datasources - package org.hkijena.jipipe.extensions.annotation.datasources
 
org.hkijena.jipipe.extensions.batchassistant - package org.hkijena.jipipe.extensions.batchassistant
 
org.hkijena.jipipe.extensions.cellpose - package org.hkijena.jipipe.extensions.cellpose
 
org.hkijena.jipipe.extensions.cellpose.algorithms - package org.hkijena.jipipe.extensions.cellpose.algorithms
 
org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated - package org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated
 
org.hkijena.jipipe.extensions.cellpose.compat - package org.hkijena.jipipe.extensions.cellpose.compat
 
org.hkijena.jipipe.extensions.cellpose.datatypes - package org.hkijena.jipipe.extensions.cellpose.datatypes
 
org.hkijena.jipipe.extensions.cellpose.installers - package org.hkijena.jipipe.extensions.cellpose.installers
 
org.hkijena.jipipe.extensions.cellpose.parameters - package org.hkijena.jipipe.extensions.cellpose.parameters
 
org.hkijena.jipipe.extensions.cellpose.parameters.deprecated - package org.hkijena.jipipe.extensions.cellpose.parameters.deprecated
 
org.hkijena.jipipe.extensions.clij2 - package org.hkijena.jipipe.extensions.clij2
 
org.hkijena.jipipe.extensions.clij2.algorithms - package org.hkijena.jipipe.extensions.clij2.algorithms
 
org.hkijena.jipipe.extensions.clij2.compat - package org.hkijena.jipipe.extensions.clij2.compat
 
org.hkijena.jipipe.extensions.clij2.datatypes - package org.hkijena.jipipe.extensions.clij2.datatypes
 
org.hkijena.jipipe.extensions.clij2.parameters - package org.hkijena.jipipe.extensions.clij2.parameters
 
org.hkijena.jipipe.extensions.clij2.ui - package org.hkijena.jipipe.extensions.clij2.ui
 
org.hkijena.jipipe.extensions.core - package org.hkijena.jipipe.extensions.core
 
org.hkijena.jipipe.extensions.core.data - package org.hkijena.jipipe.extensions.core.data
 
org.hkijena.jipipe.extensions.core.nodes - package org.hkijena.jipipe.extensions.core.nodes
 
org.hkijena.jipipe.extensions.dev - package org.hkijena.jipipe.extensions.dev
 
org.hkijena.jipipe.extensions.expressions - package org.hkijena.jipipe.extensions.expressions
 
org.hkijena.jipipe.extensions.expressions.constants - package org.hkijena.jipipe.extensions.expressions.constants
 
org.hkijena.jipipe.extensions.expressions.custom - package org.hkijena.jipipe.extensions.expressions.custom
 
org.hkijena.jipipe.extensions.expressions.functions - package org.hkijena.jipipe.extensions.expressions.functions
 
org.hkijena.jipipe.extensions.expressions.functions.collections - package org.hkijena.jipipe.extensions.expressions.functions.collections
 
org.hkijena.jipipe.extensions.expressions.functions.color - package org.hkijena.jipipe.extensions.expressions.functions.color
 
org.hkijena.jipipe.extensions.expressions.functions.control - package org.hkijena.jipipe.extensions.expressions.functions.control
 
org.hkijena.jipipe.extensions.expressions.functions.convert - package org.hkijena.jipipe.extensions.expressions.functions.convert
 
org.hkijena.jipipe.extensions.expressions.functions.datetime - package org.hkijena.jipipe.extensions.expressions.functions.datetime
 
org.hkijena.jipipe.extensions.expressions.functions.filesystem - package org.hkijena.jipipe.extensions.expressions.functions.filesystem
 
org.hkijena.jipipe.extensions.expressions.functions.functions - package org.hkijena.jipipe.extensions.expressions.functions.functions
 
org.hkijena.jipipe.extensions.expressions.functions.math - package org.hkijena.jipipe.extensions.expressions.functions.math
 
org.hkijena.jipipe.extensions.expressions.functions.quantities - package org.hkijena.jipipe.extensions.expressions.functions.quantities
 
org.hkijena.jipipe.extensions.expressions.functions.scripts - package org.hkijena.jipipe.extensions.expressions.functions.scripts
 
org.hkijena.jipipe.extensions.expressions.functions.statistics - package org.hkijena.jipipe.extensions.expressions.functions.statistics
 
org.hkijena.jipipe.extensions.expressions.functions.string - package org.hkijena.jipipe.extensions.expressions.functions.string
 
org.hkijena.jipipe.extensions.expressions.functions.util - package org.hkijena.jipipe.extensions.expressions.functions.util
 
org.hkijena.jipipe.extensions.expressions.functions.variables - package org.hkijena.jipipe.extensions.expressions.functions.variables
 
org.hkijena.jipipe.extensions.expressions.functions.vector - package org.hkijena.jipipe.extensions.expressions.functions.vector
 
org.hkijena.jipipe.extensions.expressions.operators - package org.hkijena.jipipe.extensions.expressions.operators
 
org.hkijena.jipipe.extensions.expressions.ui - package org.hkijena.jipipe.extensions.expressions.ui
 
org.hkijena.jipipe.extensions.expressions.variables - package org.hkijena.jipipe.extensions.expressions.variables
 
org.hkijena.jipipe.extensions.filesystem - package org.hkijena.jipipe.extensions.filesystem
 
org.hkijena.jipipe.extensions.filesystem.algorithms - package org.hkijena.jipipe.extensions.filesystem.algorithms
 
org.hkijena.jipipe.extensions.filesystem.compat - package org.hkijena.jipipe.extensions.filesystem.compat
 
org.hkijena.jipipe.extensions.filesystem.datasources - package org.hkijena.jipipe.extensions.filesystem.datasources
 
org.hkijena.jipipe.extensions.filesystem.dataypes - package org.hkijena.jipipe.extensions.filesystem.dataypes
 
org.hkijena.jipipe.extensions.filesystem.resultanalysis - package org.hkijena.jipipe.extensions.filesystem.resultanalysis
 
org.hkijena.jipipe.extensions.forms - package org.hkijena.jipipe.extensions.forms
 
org.hkijena.jipipe.extensions.forms.algorithms - package org.hkijena.jipipe.extensions.forms.algorithms
 
org.hkijena.jipipe.extensions.forms.algorithms.generators - package org.hkijena.jipipe.extensions.forms.algorithms.generators
 
org.hkijena.jipipe.extensions.forms.datatypes - package org.hkijena.jipipe.extensions.forms.datatypes
 
org.hkijena.jipipe.extensions.forms.ui - package org.hkijena.jipipe.extensions.forms.ui
 
org.hkijena.jipipe.extensions.forms.utils - package org.hkijena.jipipe.extensions.forms.utils
 
org.hkijena.jipipe.extensions.graphannotation - package org.hkijena.jipipe.extensions.graphannotation
 
org.hkijena.jipipe.extensions.graphannotation.nodes - package org.hkijena.jipipe.extensions.graphannotation.nodes
 
org.hkijena.jipipe.extensions.graphannotation.tools - package org.hkijena.jipipe.extensions.graphannotation.tools
 
org.hkijena.jipipe.extensions.ij3d - package org.hkijena.jipipe.extensions.ij3d
 
org.hkijena.jipipe.extensions.ij3d.compat - package org.hkijena.jipipe.extensions.ij3d.compat
 
org.hkijena.jipipe.extensions.ij3d.datatypes - package org.hkijena.jipipe.extensions.ij3d.datatypes
 
org.hkijena.jipipe.extensions.ij3d.display - package org.hkijena.jipipe.extensions.ij3d.display
 
org.hkijena.jipipe.extensions.ij3d.imageviewer - package org.hkijena.jipipe.extensions.ij3d.imageviewer
 
org.hkijena.jipipe.extensions.ij3d.nodes - package org.hkijena.jipipe.extensions.ij3d.nodes
 
org.hkijena.jipipe.extensions.ij3d.nodes.binary - package org.hkijena.jipipe.extensions.ij3d.nodes.binary
 
org.hkijena.jipipe.extensions.ij3d.nodes.features - package org.hkijena.jipipe.extensions.ij3d.nodes.features
 
org.hkijena.jipipe.extensions.ij3d.nodes.filters - package org.hkijena.jipipe.extensions.ij3d.nodes.filters
 
org.hkijena.jipipe.extensions.ij3d.nodes.overlay - package org.hkijena.jipipe.extensions.ij3d.nodes.overlay
 
org.hkijena.jipipe.extensions.ij3d.nodes.roi3d - package org.hkijena.jipipe.extensions.ij3d.nodes.roi3d
 
org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert - package org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert
 
org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter - package org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter
 
org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate - package org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate
 
org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure - package org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure
 
org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.merge - package org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.merge
 
org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata - package org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata
 
org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify - package org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify
 
org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process - package org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process
 
org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split - package org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split
 
org.hkijena.jipipe.extensions.ij3d.nodes.segmentation - package org.hkijena.jipipe.extensions.ij3d.nodes.segmentation
 
org.hkijena.jipipe.extensions.ij3d.utils - package org.hkijena.jipipe.extensions.ij3d.utils
 
org.hkijena.jipipe.extensions.ijfilaments - package org.hkijena.jipipe.extensions.ijfilaments
 
org.hkijena.jipipe.extensions.ijfilaments.datatypes - package org.hkijena.jipipe.extensions.ijfilaments.datatypes
 
org.hkijena.jipipe.extensions.ijfilaments.display - package org.hkijena.jipipe.extensions.ijfilaments.display
 
org.hkijena.jipipe.extensions.ijfilaments.nodes.convert - package org.hkijena.jipipe.extensions.ijfilaments.nodes.convert
 
org.hkijena.jipipe.extensions.ijfilaments.nodes.filter - package org.hkijena.jipipe.extensions.ijfilaments.nodes.filter
 
org.hkijena.jipipe.extensions.ijfilaments.nodes.generate - package org.hkijena.jipipe.extensions.ijfilaments.nodes.generate
 
org.hkijena.jipipe.extensions.ijfilaments.nodes.measure - package org.hkijena.jipipe.extensions.ijfilaments.nodes.measure
 
org.hkijena.jipipe.extensions.ijfilaments.nodes.merge - package org.hkijena.jipipe.extensions.ijfilaments.nodes.merge
 
org.hkijena.jipipe.extensions.ijfilaments.nodes.modify - package org.hkijena.jipipe.extensions.ijfilaments.nodes.modify
 
org.hkijena.jipipe.extensions.ijfilaments.nodes.process - package org.hkijena.jipipe.extensions.ijfilaments.nodes.process
 
org.hkijena.jipipe.extensions.ijfilaments.nodes.split - package org.hkijena.jipipe.extensions.ijfilaments.nodes.split
 
org.hkijena.jipipe.extensions.ijfilaments.parameters - package org.hkijena.jipipe.extensions.ijfilaments.parameters
 
org.hkijena.jipipe.extensions.ijfilaments.settings - package org.hkijena.jipipe.extensions.ijfilaments.settings
 
org.hkijena.jipipe.extensions.ijfilaments.util - package org.hkijena.jipipe.extensions.ijfilaments.util
 
org.hkijena.jipipe.extensions.ijmultitemplatematching - package org.hkijena.jipipe.extensions.ijmultitemplatematching
 
org.hkijena.jipipe.extensions.ijtrackmate - package org.hkijena.jipipe.extensions.ijtrackmate
 
org.hkijena.jipipe.extensions.ijtrackmate.datatypes - package org.hkijena.jipipe.extensions.ijtrackmate.datatypes
 
org.hkijena.jipipe.extensions.ijtrackmate.display.algorithms - package org.hkijena.jipipe.extensions.ijtrackmate.display.algorithms
 
org.hkijena.jipipe.extensions.ijtrackmate.display.spots - package org.hkijena.jipipe.extensions.ijtrackmate.display.spots
 
org.hkijena.jipipe.extensions.ijtrackmate.display.tracks - package org.hkijena.jipipe.extensions.ijtrackmate.display.tracks
 
org.hkijena.jipipe.extensions.ijtrackmate.display.trackscheme - package org.hkijena.jipipe.extensions.ijtrackmate.display.trackscheme
 
org.hkijena.jipipe.extensions.ijtrackmate.io - package org.hkijena.jipipe.extensions.ijtrackmate.io
 
org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters - package org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters
 
org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors - package org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors
 
org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots - package org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots
 
org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks - package org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks
 
org.hkijena.jipipe.extensions.ijtrackmate.parameters - package org.hkijena.jipipe.extensions.ijtrackmate.parameters
 
org.hkijena.jipipe.extensions.ijtrackmate.settings - package org.hkijena.jipipe.extensions.ijtrackmate.settings
 
org.hkijena.jipipe.extensions.ijtrackmate.utils - package org.hkijena.jipipe.extensions.ijtrackmate.utils
 
org.hkijena.jipipe.extensions.ijweka - package org.hkijena.jipipe.extensions.ijweka
 
org.hkijena.jipipe.extensions.ijweka.datatypes - package org.hkijena.jipipe.extensions.ijweka.datatypes
 
org.hkijena.jipipe.extensions.ijweka.nodes - package org.hkijena.jipipe.extensions.ijweka.nodes
 
org.hkijena.jipipe.extensions.ijweka.parameters - package org.hkijena.jipipe.extensions.ijweka.parameters
 
org.hkijena.jipipe.extensions.ijweka.parameters.collections - package org.hkijena.jipipe.extensions.ijweka.parameters.collections
 
org.hkijena.jipipe.extensions.ijweka.parameters.features - package org.hkijena.jipipe.extensions.ijweka.parameters.features
 
org.hkijena.jipipe.extensions.ilastik - package org.hkijena.jipipe.extensions.ilastik
 
org.hkijena.jipipe.extensions.ilastik.datatypes - package org.hkijena.jipipe.extensions.ilastik.datatypes
 
org.hkijena.jipipe.extensions.ilastik.installers - package org.hkijena.jipipe.extensions.ilastik.installers
 
org.hkijena.jipipe.extensions.ilastik.nodes - package org.hkijena.jipipe.extensions.ilastik.nodes
 
org.hkijena.jipipe.extensions.ilastik.parameters - package org.hkijena.jipipe.extensions.ilastik.parameters
 
org.hkijena.jipipe.extensions.ilastik.utils - package org.hkijena.jipipe.extensions.ilastik.utils
 
org.hkijena.jipipe.extensions.ilastik.utils.hdf5 - package org.hkijena.jipipe.extensions.ilastik.utils.hdf5
 
org.hkijena.jipipe.extensions.imagej2 - package org.hkijena.jipipe.extensions.imagej2
 
org.hkijena.jipipe.extensions.imagej2.algorithms - package org.hkijena.jipipe.extensions.imagej2.algorithms
 
org.hkijena.jipipe.extensions.imagej2.compat - package org.hkijena.jipipe.extensions.imagej2.compat
 
org.hkijena.jipipe.extensions.imagej2.converters - package org.hkijena.jipipe.extensions.imagej2.converters
 
org.hkijena.jipipe.extensions.imagej2.datatypes - package org.hkijena.jipipe.extensions.imagej2.datatypes
 
org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds - package org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds
 
org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant - package org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant
 
org.hkijena.jipipe.extensions.imagej2.datatypes.shapes - package org.hkijena.jipipe.extensions.imagej2.datatypes.shapes
 
org.hkijena.jipipe.extensions.imagej2.io - package org.hkijena.jipipe.extensions.imagej2.io
 
org.hkijena.jipipe.extensions.imagej2.io.data - package org.hkijena.jipipe.extensions.imagej2.io.data
 
org.hkijena.jipipe.extensions.imagej2.io.data.input - package org.hkijena.jipipe.extensions.imagej2.io.data.input
 
org.hkijena.jipipe.extensions.imagej2.io.data.output - package org.hkijena.jipipe.extensions.imagej2.io.data.output
 
org.hkijena.jipipe.extensions.imagej2.io.parameters - package org.hkijena.jipipe.extensions.imagej2.io.parameters
 
org.hkijena.jipipe.extensions.imagej2.io.parameters.input - package org.hkijena.jipipe.extensions.imagej2.io.parameters.input
 
org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays - package org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays
 
org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives - package org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives
 
org.hkijena.jipipe.extensions.imagej2.io.parameters.output - package org.hkijena.jipipe.extensions.imagej2.io.parameters.output
 
org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives - package org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives
 
org.hkijena.jipipe.extensions.imagej2.util - package org.hkijena.jipipe.extensions.imagej2.util
 
org.hkijena.jipipe.extensions.imagejalgorithms - package org.hkijena.jipipe.extensions.imagejalgorithms
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.fft - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.fft
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.misc - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.misc
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.register - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.register
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.split - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.split
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.sharpen - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.sharpen
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local
 
org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform - package org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
 
org.hkijena.jipipe.extensions.imagejalgorithms.parameters - package org.hkijena.jipipe.extensions.imagejalgorithms.parameters
 
org.hkijena.jipipe.extensions.imagejalgorithms.utils - package org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
org.hkijena.jipipe.extensions.imagejdatatypes - package org.hkijena.jipipe.extensions.imagejdatatypes
 
org.hkijena.jipipe.extensions.imagejdatatypes.algorithms - package org.hkijena.jipipe.extensions.imagejdatatypes.algorithms
 
org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color - package org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color
 
org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources - package org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources
 
org.hkijena.jipipe.extensions.imagejdatatypes.colorspace - package org.hkijena.jipipe.extensions.imagejdatatypes.colorspace
 
org.hkijena.jipipe.extensions.imagejdatatypes.compat - package org.hkijena.jipipe.extensions.imagejdatatypes.compat
 
org.hkijena.jipipe.extensions.imagejdatatypes.datatypes - package org.hkijena.jipipe.extensions.imagejdatatypes.datatypes
 
org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color - package org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color
 
org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2 - package org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2
 
org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color - package org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color
 
org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale - package org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale
 
org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3 - package org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3
 
org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color - package org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color
 
org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale - package org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale
 
org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4 - package org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4
 
org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color - package org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color
 
org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale - package org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale
 
org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5 - package org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5
 
org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color - package org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color
 
org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale - package org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale
 
org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft - package org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft
 
org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale - package org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale
 
org.hkijena.jipipe.extensions.imagejdatatypes.display - package org.hkijena.jipipe.extensions.imagejdatatypes.display
 
org.hkijena.jipipe.extensions.imagejdatatypes.filters - package org.hkijena.jipipe.extensions.imagejdatatypes.filters
 
org.hkijena.jipipe.extensions.imagejdatatypes.parameters - package org.hkijena.jipipe.extensions.imagejdatatypes.parameters
 
org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis - package org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis
 
org.hkijena.jipipe.extensions.imagejdatatypes.settings - package org.hkijena.jipipe.extensions.imagejdatatypes.settings
 
org.hkijena.jipipe.extensions.imagejdatatypes.tools - package org.hkijena.jipipe.extensions.imagejdatatypes.tools
 
org.hkijena.jipipe.extensions.imagejdatatypes.util - package org.hkijena.jipipe.extensions.imagejdatatypes.util
 
org.hkijena.jipipe.extensions.imagejdatatypes.util.measure - package org.hkijena.jipipe.extensions.imagejdatatypes.util.measure
 
org.hkijena.jipipe.extensions.imageviewer - package org.hkijena.jipipe.extensions.imageviewer
 
org.hkijena.jipipe.extensions.imageviewer.plugins2d - package org.hkijena.jipipe.extensions.imageviewer.plugins2d
 
org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer - package org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer
 
org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager - package org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager
 
org.hkijena.jipipe.extensions.imageviewer.plugins3d - package org.hkijena.jipipe.extensions.imageviewer.plugins3d
 
org.hkijena.jipipe.extensions.imageviewer.runs - package org.hkijena.jipipe.extensions.imageviewer.runs
 
org.hkijena.jipipe.extensions.imageviewer.settings - package org.hkijena.jipipe.extensions.imageviewer.settings
 
org.hkijena.jipipe.extensions.imageviewer.utils - package org.hkijena.jipipe.extensions.imageviewer.utils
 
org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d - package org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d
 
org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d - package org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d
 
org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe - package org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe
 
org.hkijena.jipipe.extensions.imp - package org.hkijena.jipipe.extensions.imp
 
org.hkijena.jipipe.extensions.imp.datatypes - package org.hkijena.jipipe.extensions.imp.datatypes
 
org.hkijena.jipipe.extensions.imp.nodes - package org.hkijena.jipipe.extensions.imp.nodes
 
org.hkijena.jipipe.extensions.imp.utils - package org.hkijena.jipipe.extensions.imp.utils
 
org.hkijena.jipipe.extensions.jsonextensionloader - package org.hkijena.jipipe.extensions.jsonextensionloader
 
org.hkijena.jipipe.extensions.multiparameters - package org.hkijena.jipipe.extensions.multiparameters
 
org.hkijena.jipipe.extensions.multiparameters.converters - package org.hkijena.jipipe.extensions.multiparameters.converters
 
org.hkijena.jipipe.extensions.multiparameters.datatypes - package org.hkijena.jipipe.extensions.multiparameters.datatypes
 
org.hkijena.jipipe.extensions.multiparameters.nodes - package org.hkijena.jipipe.extensions.multiparameters.nodes
 
org.hkijena.jipipe.extensions.nodeexamples - package org.hkijena.jipipe.extensions.nodeexamples
 
org.hkijena.jipipe.extensions.nodetemplate - package org.hkijena.jipipe.extensions.nodetemplate
 
org.hkijena.jipipe.extensions.nodetemplate.templatedownloader - package org.hkijena.jipipe.extensions.nodetemplate.templatedownloader
 
org.hkijena.jipipe.extensions.nodetoolboxtool - package org.hkijena.jipipe.extensions.nodetoolboxtool
 
org.hkijena.jipipe.extensions.omero - package org.hkijena.jipipe.extensions.omero
 
org.hkijena.jipipe.extensions.omero.datatypes - package org.hkijena.jipipe.extensions.omero.datatypes
 
org.hkijena.jipipe.extensions.omero.nodes.annotate - package org.hkijena.jipipe.extensions.omero.nodes.annotate
 
org.hkijena.jipipe.extensions.omero.nodes.datasources - package org.hkijena.jipipe.extensions.omero.nodes.datasources
 
org.hkijena.jipipe.extensions.omero.nodes.download - package org.hkijena.jipipe.extensions.omero.nodes.download
 
org.hkijena.jipipe.extensions.omero.nodes.manage - package org.hkijena.jipipe.extensions.omero.nodes.manage
 
org.hkijena.jipipe.extensions.omero.nodes.navigate - package org.hkijena.jipipe.extensions.omero.nodes.navigate
 
org.hkijena.jipipe.extensions.omero.nodes.upload - package org.hkijena.jipipe.extensions.omero.nodes.upload
 
org.hkijena.jipipe.extensions.omero.parameters - package org.hkijena.jipipe.extensions.omero.parameters
 
org.hkijena.jipipe.extensions.omero.util - package org.hkijena.jipipe.extensions.omero.util
 
org.hkijena.jipipe.extensions.omnipose - package org.hkijena.jipipe.extensions.omnipose
 
org.hkijena.jipipe.extensions.omnipose.algorithms - package org.hkijena.jipipe.extensions.omnipose.algorithms
 
org.hkijena.jipipe.extensions.omnipose.installers - package org.hkijena.jipipe.extensions.omnipose.installers
 
org.hkijena.jipipe.extensions.omnipose.parameters - package org.hkijena.jipipe.extensions.omnipose.parameters
 
org.hkijena.jipipe.extensions.parameters - package org.hkijena.jipipe.extensions.parameters
 
org.hkijena.jipipe.extensions.parameters.api.collections - package org.hkijena.jipipe.extensions.parameters.api.collections
 
org.hkijena.jipipe.extensions.parameters.api.enums - package org.hkijena.jipipe.extensions.parameters.api.enums
 
org.hkijena.jipipe.extensions.parameters.api.functions - package org.hkijena.jipipe.extensions.parameters.api.functions
 
org.hkijena.jipipe.extensions.parameters.api.graph - package org.hkijena.jipipe.extensions.parameters.api.graph
 
org.hkijena.jipipe.extensions.parameters.api.matrix - package org.hkijena.jipipe.extensions.parameters.api.matrix
 
org.hkijena.jipipe.extensions.parameters.api.optional - package org.hkijena.jipipe.extensions.parameters.api.optional
 
org.hkijena.jipipe.extensions.parameters.api.pairs - package org.hkijena.jipipe.extensions.parameters.api.pairs
 
org.hkijena.jipipe.extensions.parameters.api.scripts - package org.hkijena.jipipe.extensions.parameters.api.scripts
 
org.hkijena.jipipe.extensions.parameters.library.auth - package org.hkijena.jipipe.extensions.parameters.library.auth
 
org.hkijena.jipipe.extensions.parameters.library.collections - package org.hkijena.jipipe.extensions.parameters.library.collections
 
org.hkijena.jipipe.extensions.parameters.library.colors - package org.hkijena.jipipe.extensions.parameters.library.colors
 
org.hkijena.jipipe.extensions.parameters.library.editors - package org.hkijena.jipipe.extensions.parameters.library.editors
 
org.hkijena.jipipe.extensions.parameters.library.filesystem - package org.hkijena.jipipe.extensions.parameters.library.filesystem
 
org.hkijena.jipipe.extensions.parameters.library.graph - package org.hkijena.jipipe.extensions.parameters.library.graph
 
org.hkijena.jipipe.extensions.parameters.library.images - package org.hkijena.jipipe.extensions.parameters.library.images
 
org.hkijena.jipipe.extensions.parameters.library.jipipe - package org.hkijena.jipipe.extensions.parameters.library.jipipe
 
org.hkijena.jipipe.extensions.parameters.library.markup - package org.hkijena.jipipe.extensions.parameters.library.markup
 
org.hkijena.jipipe.extensions.parameters.library.matrix - package org.hkijena.jipipe.extensions.parameters.library.matrix
 
org.hkijena.jipipe.extensions.parameters.library.pairs - package org.hkijena.jipipe.extensions.parameters.library.pairs
 
org.hkijena.jipipe.extensions.parameters.library.patterns - package org.hkijena.jipipe.extensions.parameters.library.patterns
 
org.hkijena.jipipe.extensions.parameters.library.primitives - package org.hkijena.jipipe.extensions.parameters.library.primitives
 
org.hkijena.jipipe.extensions.parameters.library.primitives.list - package org.hkijena.jipipe.extensions.parameters.library.primitives.list
 
org.hkijena.jipipe.extensions.parameters.library.primitives.optional - package org.hkijena.jipipe.extensions.parameters.library.primitives.optional
 
org.hkijena.jipipe.extensions.parameters.library.primitives.ranges - package org.hkijena.jipipe.extensions.parameters.library.primitives.ranges
 
org.hkijena.jipipe.extensions.parameters.library.quantities - package org.hkijena.jipipe.extensions.parameters.library.quantities
 
org.hkijena.jipipe.extensions.parameters.library.ranges - package org.hkijena.jipipe.extensions.parameters.library.ranges
 
org.hkijena.jipipe.extensions.parameters.library.references - package org.hkijena.jipipe.extensions.parameters.library.references
 
org.hkijena.jipipe.extensions.parameters.library.roi - package org.hkijena.jipipe.extensions.parameters.library.roi
 
org.hkijena.jipipe.extensions.parameters.library.scripts - package org.hkijena.jipipe.extensions.parameters.library.scripts
 
org.hkijena.jipipe.extensions.parameters.library.table - package org.hkijena.jipipe.extensions.parameters.library.table
 
org.hkijena.jipipe.extensions.parameters.library.util - package org.hkijena.jipipe.extensions.parameters.library.util
 
org.hkijena.jipipe.extensions.pipelinerender - package org.hkijena.jipipe.extensions.pipelinerender
 
org.hkijena.jipipe.extensions.plots - package org.hkijena.jipipe.extensions.plots
 
org.hkijena.jipipe.extensions.plots.converters - package org.hkijena.jipipe.extensions.plots.converters
 
org.hkijena.jipipe.extensions.plots.datatypes - package org.hkijena.jipipe.extensions.plots.datatypes
 
org.hkijena.jipipe.extensions.plots.nodes - package org.hkijena.jipipe.extensions.plots.nodes
 
org.hkijena.jipipe.extensions.plots.parameters - package org.hkijena.jipipe.extensions.plots.parameters
 
org.hkijena.jipipe.extensions.plots.ui.resultanalysis - package org.hkijena.jipipe.extensions.plots.ui.resultanalysis
 
org.hkijena.jipipe.extensions.plots.utils - package org.hkijena.jipipe.extensions.plots.utils
 
org.hkijena.jipipe.extensions.processes - package org.hkijena.jipipe.extensions.processes
 
org.hkijena.jipipe.extensions.python - package org.hkijena.jipipe.extensions.python
 
org.hkijena.jipipe.extensions.python.adapter - package org.hkijena.jipipe.extensions.python.adapter
 
org.hkijena.jipipe.extensions.python.algorithms - package org.hkijena.jipipe.extensions.python.algorithms
 
org.hkijena.jipipe.extensions.python.installers - package org.hkijena.jipipe.extensions.python.installers
 
org.hkijena.jipipe.extensions.r - package org.hkijena.jipipe.extensions.r
 
org.hkijena.jipipe.extensions.r.algorithms - package org.hkijena.jipipe.extensions.r.algorithms
 
org.hkijena.jipipe.extensions.r.installers - package org.hkijena.jipipe.extensions.r.installers
 
org.hkijena.jipipe.extensions.r.parameters - package org.hkijena.jipipe.extensions.r.parameters
 
org.hkijena.jipipe.extensions.r.ui - package org.hkijena.jipipe.extensions.r.ui
 
org.hkijena.jipipe.extensions.scene3d - package org.hkijena.jipipe.extensions.scene3d
 
org.hkijena.jipipe.extensions.scene3d.datatypes - package org.hkijena.jipipe.extensions.scene3d.datatypes
 
org.hkijena.jipipe.extensions.scene3d.model - package org.hkijena.jipipe.extensions.scene3d.model
 
org.hkijena.jipipe.extensions.scene3d.model.geometries - package org.hkijena.jipipe.extensions.scene3d.model.geometries
 
org.hkijena.jipipe.extensions.scene3d.nodes - package org.hkijena.jipipe.extensions.scene3d.nodes
 
org.hkijena.jipipe.extensions.scene3d.utils - package org.hkijena.jipipe.extensions.scene3d.utils
 
org.hkijena.jipipe.extensions.settings - package org.hkijena.jipipe.extensions.settings
 
org.hkijena.jipipe.extensions.strings - package org.hkijena.jipipe.extensions.strings
 
org.hkijena.jipipe.extensions.strings.datasources - package org.hkijena.jipipe.extensions.strings.datasources
 
org.hkijena.jipipe.extensions.strings.nodes.json - package org.hkijena.jipipe.extensions.strings.nodes.json
 
org.hkijena.jipipe.extensions.strings.nodes.text - package org.hkijena.jipipe.extensions.strings.nodes.text
 
org.hkijena.jipipe.extensions.strings.nodes.xml - package org.hkijena.jipipe.extensions.strings.nodes.xml
 
org.hkijena.jipipe.extensions.tables - package org.hkijena.jipipe.extensions.tables
 
org.hkijena.jipipe.extensions.tables.compat - package org.hkijena.jipipe.extensions.tables.compat
 
org.hkijena.jipipe.extensions.tables.datatypes - package org.hkijena.jipipe.extensions.tables.datatypes
 
org.hkijena.jipipe.extensions.tables.display - package org.hkijena.jipipe.extensions.tables.display
 
org.hkijena.jipipe.extensions.tables.nodes - package org.hkijena.jipipe.extensions.tables.nodes
 
org.hkijena.jipipe.extensions.tables.nodes.annotations - package org.hkijena.jipipe.extensions.tables.nodes.annotations
 
org.hkijena.jipipe.extensions.tables.nodes.columns - package org.hkijena.jipipe.extensions.tables.nodes.columns
 
org.hkijena.jipipe.extensions.tables.nodes.filter - package org.hkijena.jipipe.extensions.tables.nodes.filter
 
org.hkijena.jipipe.extensions.tables.nodes.merge - package org.hkijena.jipipe.extensions.tables.nodes.merge
 
org.hkijena.jipipe.extensions.tables.nodes.rows - package org.hkijena.jipipe.extensions.tables.nodes.rows
 
org.hkijena.jipipe.extensions.tables.nodes.split - package org.hkijena.jipipe.extensions.tables.nodes.split
 
org.hkijena.jipipe.extensions.tables.nodes.transform - package org.hkijena.jipipe.extensions.tables.nodes.transform
 
org.hkijena.jipipe.extensions.tables.operations.converting - package org.hkijena.jipipe.extensions.tables.operations.converting
 
org.hkijena.jipipe.extensions.tables.operations.integrating - package org.hkijena.jipipe.extensions.tables.operations.integrating
 
org.hkijena.jipipe.extensions.tables.parameters - package org.hkijena.jipipe.extensions.tables.parameters
 
org.hkijena.jipipe.extensions.tables.parameters.collections - package org.hkijena.jipipe.extensions.tables.parameters.collections
 
org.hkijena.jipipe.extensions.tables.parameters.enums - package org.hkijena.jipipe.extensions.tables.parameters.enums
 
org.hkijena.jipipe.extensions.tables.parameters.processors - package org.hkijena.jipipe.extensions.tables.parameters.processors
 
org.hkijena.jipipe.extensions.tools - package org.hkijena.jipipe.extensions.tools
 
org.hkijena.jipipe.extensions.utils - package org.hkijena.jipipe.extensions.utils
 
org.hkijena.jipipe.extensions.utils.algorithms - package org.hkijena.jipipe.extensions.utils.algorithms
 
org.hkijena.jipipe.extensions.utils.algorithms.datatable - package org.hkijena.jipipe.extensions.utils.algorithms.datatable
 
org.hkijena.jipipe.extensions.utils.algorithms.distribute - package org.hkijena.jipipe.extensions.utils.algorithms.distribute
 
org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps - package org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps
 
org.hkijena.jipipe.extensions.utils.algorithms.meta - package org.hkijena.jipipe.extensions.utils.algorithms.meta
 
org.hkijena.jipipe.extensions.utils.algorithms.processes - package org.hkijena.jipipe.extensions.utils.algorithms.processes
 
org.hkijena.jipipe.extensions.utils.contextmenu - package org.hkijena.jipipe.extensions.utils.contextmenu
 
org.hkijena.jipipe.extensions.utils.datatypes - package org.hkijena.jipipe.extensions.utils.datatypes
 
org.hkijena.jipipe.extensions.utils.display - package org.hkijena.jipipe.extensions.utils.display
 
org.hkijena.jipipe.ui - package org.hkijena.jipipe.ui
 
org.hkijena.jipipe.ui.backups - package org.hkijena.jipipe.ui.backups
 
org.hkijena.jipipe.ui.batchassistant - package org.hkijena.jipipe.ui.batchassistant
 
org.hkijena.jipipe.ui.bookmarks - package org.hkijena.jipipe.ui.bookmarks
 
org.hkijena.jipipe.ui.cache - package org.hkijena.jipipe.ui.cache
 
org.hkijena.jipipe.ui.cache.cachetree - package org.hkijena.jipipe.ui.cache.cachetree
 
org.hkijena.jipipe.ui.cache.exporters - package org.hkijena.jipipe.ui.cache.exporters
 
org.hkijena.jipipe.ui.cache.importers - package org.hkijena.jipipe.ui.cache.importers
 
org.hkijena.jipipe.ui.cache.renderers - package org.hkijena.jipipe.ui.cache.renderers
 
org.hkijena.jipipe.ui.compat - package org.hkijena.jipipe.ui.compat
 
org.hkijena.jipipe.ui.components - package org.hkijena.jipipe.ui.components
 
org.hkijena.jipipe.ui.components.html - package org.hkijena.jipipe.ui.components.html
 
org.hkijena.jipipe.ui.components.icons - package org.hkijena.jipipe.ui.components.icons
 
org.hkijena.jipipe.ui.components.layouts - package org.hkijena.jipipe.ui.components.layouts
 
org.hkijena.jipipe.ui.components.markdown - package org.hkijena.jipipe.ui.components.markdown
 
org.hkijena.jipipe.ui.components.pickers - package org.hkijena.jipipe.ui.components.pickers
 
org.hkijena.jipipe.ui.components.renderers - package org.hkijena.jipipe.ui.components.renderers
 
org.hkijena.jipipe.ui.components.ribbon - package org.hkijena.jipipe.ui.components.ribbon
 
org.hkijena.jipipe.ui.components.search - package org.hkijena.jipipe.ui.components.search
 
org.hkijena.jipipe.ui.components.tabs - package org.hkijena.jipipe.ui.components.tabs
 
org.hkijena.jipipe.ui.components.window - package org.hkijena.jipipe.ui.components.window
 
org.hkijena.jipipe.ui.data - package org.hkijena.jipipe.ui.data
 
org.hkijena.jipipe.ui.datatable - package org.hkijena.jipipe.ui.datatable
 
org.hkijena.jipipe.ui.datatracer - package org.hkijena.jipipe.ui.datatracer
 
org.hkijena.jipipe.ui.documentation - package org.hkijena.jipipe.ui.documentation
 
org.hkijena.jipipe.ui.events - package org.hkijena.jipipe.ui.events
 
org.hkijena.jipipe.ui.extension - package org.hkijena.jipipe.ui.extension
 
org.hkijena.jipipe.ui.extensionbuilder - package org.hkijena.jipipe.ui.extensionbuilder
 
org.hkijena.jipipe.ui.extensions - package org.hkijena.jipipe.ui.extensions
 
org.hkijena.jipipe.ui.grapheditor - package org.hkijena.jipipe.ui.grapheditor
 
org.hkijena.jipipe.ui.grapheditor.algorithmpipeline - package org.hkijena.jipipe.ui.grapheditor.algorithmpipeline
 
org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.actions - package org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.actions
 
org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.dragdrop - package org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.dragdrop
 
org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties - package org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties
 
org.hkijena.jipipe.ui.grapheditor.compartments - package org.hkijena.jipipe.ui.grapheditor.compartments
 
org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard - package org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard
 
org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard - package org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard
 
org.hkijena.jipipe.ui.grapheditor.compartments.dragdrop - package org.hkijena.jipipe.ui.grapheditor.compartments.dragdrop
 
org.hkijena.jipipe.ui.grapheditor.compartments.properties - package org.hkijena.jipipe.ui.grapheditor.compartments.properties
 
org.hkijena.jipipe.ui.grapheditor.general - package org.hkijena.jipipe.ui.grapheditor.general
 
org.hkijena.jipipe.ui.grapheditor.general.actions - package org.hkijena.jipipe.ui.grapheditor.general.actions
 
org.hkijena.jipipe.ui.grapheditor.general.connections - package org.hkijena.jipipe.ui.grapheditor.general.connections
 
org.hkijena.jipipe.ui.grapheditor.general.contextmenu - package org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation - package org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation
 
org.hkijena.jipipe.ui.grapheditor.general.layout - package org.hkijena.jipipe.ui.grapheditor.general.layout
 
org.hkijena.jipipe.ui.grapheditor.general.nodeui - package org.hkijena.jipipe.ui.grapheditor.general.nodeui
 
org.hkijena.jipipe.ui.grapheditor.general.properties - package org.hkijena.jipipe.ui.grapheditor.general.properties
 
org.hkijena.jipipe.ui.grapheditor.general.search - package org.hkijena.jipipe.ui.grapheditor.general.search
 
org.hkijena.jipipe.ui.grapheditor.nodefinder - package org.hkijena.jipipe.ui.grapheditor.nodefinder
 
org.hkijena.jipipe.ui.grouping - package org.hkijena.jipipe.ui.grouping
 
org.hkijena.jipipe.ui.history - package org.hkijena.jipipe.ui.history
 
org.hkijena.jipipe.ui.ijupdater - package org.hkijena.jipipe.ui.ijupdater
 
org.hkijena.jipipe.ui.notifications - package org.hkijena.jipipe.ui.notifications
 
org.hkijena.jipipe.ui.parameterreference - package org.hkijena.jipipe.ui.parameterreference
 
org.hkijena.jipipe.ui.parameters - package org.hkijena.jipipe.ui.parameters
 
org.hkijena.jipipe.ui.plotbuilder - package org.hkijena.jipipe.ui.plotbuilder
 
org.hkijena.jipipe.ui.project - package org.hkijena.jipipe.ui.project
 
org.hkijena.jipipe.ui.project.templatedownloader - package org.hkijena.jipipe.ui.project.templatedownloader
 
org.hkijena.jipipe.ui.quickrun - package org.hkijena.jipipe.ui.quickrun
 
org.hkijena.jipipe.ui.registries - package org.hkijena.jipipe.ui.registries
 
org.hkijena.jipipe.ui.resultanalysis - package org.hkijena.jipipe.ui.resultanalysis
 
org.hkijena.jipipe.ui.resultanalysis.renderers - package org.hkijena.jipipe.ui.resultanalysis.renderers
 
org.hkijena.jipipe.ui.running - package org.hkijena.jipipe.ui.running
 
org.hkijena.jipipe.ui.settings - package org.hkijena.jipipe.ui.settings
 
org.hkijena.jipipe.ui.tableeditor - package org.hkijena.jipipe.ui.tableeditor
 
org.hkijena.jipipe.ui.texteditor - package org.hkijena.jipipe.ui.texteditor
 
org.hkijena.jipipe.ui.theme - package org.hkijena.jipipe.ui.theme
 
org.hkijena.jipipe.utils - package org.hkijena.jipipe.utils
 
org.hkijena.jipipe.utils.classfilters - package org.hkijena.jipipe.utils.classfilters
 
org.hkijena.jipipe.utils.data - package org.hkijena.jipipe.utils.data
 
org.hkijena.jipipe.utils.json - package org.hkijena.jipipe.utils.json
 
org.hkijena.jipipe.utils.scripting - package org.hkijena.jipipe.utils.scripting
 
org.hkijena.jipipe.utils.search - package org.hkijena.jipipe.utils.search
 
org.hkijena.jipipe.utils.ui - package org.hkijena.jipipe.utils.ui
 
org.hkijena.jipipe.utils.ui.events - package org.hkijena.jipipe.utils.ui.events
 
org.hkijena.jipipe.utils.xml - package org.hkijena.jipipe.utils.xml
 
originInCanvas(Point2d) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Stores the canvas position of the origin of the vworld in the specified Point2d.
OrthoSliderPanel(String, SlicerControlsPlugin3D, Icon) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.OrthoSliderPanel
 
Otsu(ImageProcessor, int, int, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm
 
outline(ROI3DOutline, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
outline(RoiOutline) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Outlines all Roi in this list by the specified algorithm.
OutlineRoi3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process
Wrapper around RoiManager
OutlineRoi3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process.OutlineRoi3DAlgorithm
Instantiates a new node type.
OutlineRoi3DAlgorithm(OutlineRoi3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process.OutlineRoi3DAlgorithm
Instantiates a new node type.
OutlineRoiAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify
Wrapper around RoiManager
OutlineRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.OutlineRoiAlgorithm
Instantiates a new node type.
OutlineRoiAlgorithm(OutlineRoiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.OutlineRoiAlgorithm
Instantiates a new node type.
OutOfBoundsFactoryImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.data.input
Handling of OutOfBoundsFactory
OutOfBoundsFactoryImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.data.input.OutOfBoundsFactoryImageJ2ModuleInput
 
OUTPUT_FLOWS_D - Static variable in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
OUTPUT_FLOWS_D - Static variable in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
OUTPUT_FLOWS_XY - Static variable in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
OUTPUT_FLOWS_XY - Static variable in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
OUTPUT_FLOWS_Z - Static variable in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
OUTPUT_FLOWS_Z - Static variable in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
OUTPUT_LABELS - Static variable in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
OUTPUT_LABELS - Static variable in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
OUTPUT_PROBABILITIES - Static variable in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
OUTPUT_PROBABILITIES - Static variable in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
OUTPUT_ROI - Static variable in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
OUTPUT_ROI - Static variable in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
OUTPUT_SIZE_MODEL - Static variable in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
OUTPUT_SIZE_MODEL - Static variable in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
OUTPUT_SLOT_BLOCKWISE_OBJECT_PREDICTIONS - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
OUTPUT_SLOT_BLOCKWISE_OBJECT_PREDICTIONS - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
OUTPUT_SLOT_BLOCKWISE_OBJECT_PREDICTIONS - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
OUTPUT_SLOT_BLOCKWISE_OBJECT_PROBABILITIES - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
OUTPUT_SLOT_BLOCKWISE_OBJECT_PROBABILITIES - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
OUTPUT_SLOT_BLOCKWISE_OBJECT_PROBABILITIES - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
OUTPUT_SLOT_FEATURES - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
OUTPUT_SLOT_FEATURES - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm
 
OUTPUT_SLOT_FEATURES - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
OUTPUT_SLOT_FEATURES - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
OUTPUT_SLOT_FEATURES_STAGE_1 - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
OUTPUT_SLOT_FEATURES_STAGE_2 - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
OUTPUT_SLOT_INPUT_STAGE_1 - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
OUTPUT_SLOT_INPUT_STAGE_2 - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
OUTPUT_SLOT_LABELS - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm
 
OUTPUT_SLOT_LABELS_STAGE_1 - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
OUTPUT_SLOT_LABELS_STAGE_2 - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
OUTPUT_SLOT_MATCHED_TEMPLATES - Static variable in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
OUTPUT_SLOT_OBJECT_PREDICTIONS - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
OUTPUT_SLOT_OBJECT_PREDICTIONS - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
OUTPUT_SLOT_OBJECT_PREDICTIONS - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
OUTPUT_SLOT_OBJECT_PROBABILITIES - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
OUTPUT_SLOT_OBJECT_PROBABILITIES - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
OUTPUT_SLOT_OBJECT_PROBABILITIES - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
OUTPUT_SLOT_PIXEL_PROBABILITIES - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
OUTPUT_SLOT_PIXEL_PROBABILITIES - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
OUTPUT_SLOT_PIXEL_PROBABILITIES - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
OUTPUT_SLOT_PROBABILITIES - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm
 
OUTPUT_SLOT_PROBABILITIES_ALL_STAGES - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
OUTPUT_SLOT_PROBABILITIES_STAGE_1 - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
OUTPUT_SLOT_PROBABILITIES_STAGE_2 - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
OUTPUT_SLOT_SIMPLE_SEGMENTATION - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm
 
OUTPUT_SLOT_SIMPLE_SEGMENTATION_STAGE_1 - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
OUTPUT_SLOT_SIMPLE_SEGMENTATION_STAGE_2 - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
OUTPUT_SLOT_UNCERTAINTY - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm
 
OUTPUT_SLOT_UNCERTAINTY_STAGE_1 - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
OUTPUT_SLOT_UNCERTAINTY_STAGE_2 - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
outputDims(long[], List<AxisType>, DatasetType, int[], int[]) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.ImgUtils
Compute chunk and block dimensions suitable for writing.
OutputFolderDataSource - Class in org.hkijena.jipipe.extensions.filesystem.datasources
 
OutputFolderDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.OutputFolderDataSource
 
OutputFolderDataSource(OutputFolderDataSource) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.OutputFolderDataSource
 
OutputParameters() - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
OutputParameters(IlastikAutoContextAlgorithm.OutputParameters) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
OutputParameters() - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters
 
OutputParameters(IlastikObjectClassificationAlgorithm.OutputParameters) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters
 
OutputParameters() - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters
 
OutputParameters(IlastikPixelClassificationAlgorithm.OutputParameters) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters
 
OutputParameters() - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters
 
OutputParameters(IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters
 
OutputParameters() - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters
 
OutputParameters(IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters) - Constructor for class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters
 
OutputParameters(AnalyzeSkeleton2D3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters
 
OutputParameters(AnalyzeSkeleton2D3DAlgorithm.OutputParameters, AnalyzeSkeleton2D3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters
 
OutputSelectedEvent(JIPipeAlgorithmCacheBrowserOutputSelectorUI, String) - Constructor for class org.hkijena.jipipe.ui.cache.JIPipeAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEvent
 
OutputSelectedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.cache.JIPipeAlgorithmCacheBrowserOutputSelectorUI.OutputSelectedEventEmitter
 
OutputSettings() - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings
 
OutputSettings(JIPipeRuntimePartition.OutputSettings) - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings
 
OutputSlotMapParameterCollection - Class in org.hkijena.jipipe.extensions.parameters.library.graph
Parameter that holds a value for each data slot
OutputSlotMapParameterCollection(Class<?>, JIPipeGraphNode, Function<JIPipeDataSlotInfo, Object>, boolean) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.graph.OutputSlotMapParameterCollection
Creates a new instance
OutputSlotMapParameterCollection(Class<?>, JIPipeGraphNode, Function<JIPipeDataSlotInfo, Object>) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.graph.OutputSlotMapParameterCollection
Creates a new instance
OutputSlotMapParameterCollection(Class<?>, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.graph.OutputSlotMapParameterCollection
Creates a new instance
outputSlotsToPython(StringBuilder, List<JIPipeOutputDataSlot>, Map<String, Path>) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
 
outputSlotsToR(StringBuilder, List<JIPipeOutputDataSlot>, Map<String, Path>) - Static method in class org.hkijena.jipipe.extensions.r.RUtils
 
OutputTableColumnInfo(int, String, boolean) - Constructor for class org.hkijena.jipipe.extensions.clij2.CLIJCommandNodeInfo.OutputTableColumnInfo
 
OverlapMeasureLabelsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
OverlapMeasureLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.OverlapMeasureLabelsAlgorithm
 
OverlapMeasureLabelsAlgorithm(OverlapMeasureLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.OverlapMeasureLabelsAlgorithm
 
OverlapStatistics - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.parameters
 
OverlapStatisticsSetParameter - Class in org.hkijena.jipipe.extensions.imagejalgorithms.parameters
A DynamicSetParameter that contains image statistics measurements.
OverlapStatisticsSetParameter() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OverlapStatisticsSetParameter
 
OverlapStatisticsSetParameter(OverlapStatisticsSetParameter) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OverlapStatisticsSetParameter
 
OverlapStatisticsSetParameter(Set<OverlapStatistics>) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OverlapStatisticsSetParameter
 
OverlayColorIcon - Class in org.hkijena.jipipe.ui.components.icons
Icon that overlays a color rectangle on top of another icon
OverlayColorIcon(Icon, Rectangle, boolean, boolean) - Constructor for class org.hkijena.jipipe.ui.components.icons.OverlayColorIcon
 
OverlayImagesAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color
Deprecated.
OverlayImagesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.OverlayImagesAlgorithm
Deprecated.
 
OverlayImagesAlgorithm(OverlayImagesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.OverlayImagesAlgorithm
Deprecated.
 
OverlayImagesAlgorithm.Channel - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color
Deprecated.
 
OverwriteAnnotations - Class in org.hkijena.jipipe.extensions.annotation.algorithms
 
OverwriteAnnotations(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.OverwriteAnnotations
 
OverwriteAnnotations(OverwriteAnnotations) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.OverwriteAnnotations
 
OwningStore<T> - Class in org.hkijena.jipipe.utils.data
A store that keeps a strong reference to the data
OwningStore(T) - Constructor for class org.hkijena.jipipe.utils.data.OwningStore
 

P

packDataTable(JXTable) - Static method in class org.hkijena.jipipe.utils.UIUtils
packAll() for a data table (with a limit)
padSelectedTab(int, int) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI.TabbedPaneLayout
 
paint(Graphics) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.ThumbRenderer
 
paint(Graphics) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.TrackRenderer
 
paint(Graphics) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl.ThumbRenderer
 
paint(Graphics) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl.TrackRenderer
 
paint(Graphics) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI.ThumbRenderer
 
paint(Graphics) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI.TrackRenderer
 
paint(Graphics) - Method in class org.hkijena.jipipe.ui.components.FormPanel.FormPanelContentPanel
 
paint(Graphics, Shape) - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Paints the View.
paint(Graphics) - Method in class org.hkijena.jipipe.ui.components.ImageFrame
 
paint(Graphics) - Method in class org.hkijena.jipipe.ui.components.MessagePanel.Message
 
paint(Graphics2D, int, int, int, int) - Method in class org.hkijena.jipipe.ui.components.renderers.DropShadowRenderer
 
paint(Graphics) - Method in class org.hkijena.jipipe.ui.extensions.ExtensionItemLogoPanel
 
paint(Graphics) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
paint(Graphics) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorMinimap
 
paint(Graphics) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
 
paint(Graphics, JComponent) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
paintAfterNodesAndEdges(Graphics2D) - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeToggleableGraphEditorTool
 
paintAfterNodesAndEdges(Graphics2D) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
paintBelowNodesAfterEdges(Graphics2D) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
paintBelowNodesAfterEdges(Graphics2D) - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeToggleableGraphEditorTool
 
paintBelowNodesAndEdges(Graphics2D) - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeToggleableGraphEditorTool
 
paintBorder(Component, Graphics, int, int, int, int) - Method in class org.hkijena.jipipe.utils.ui.RoundedLineBorder
 
paintBottomTabBorder(int, Graphics, int, int, int, int, int, int, boolean) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
paintComponent(Graphics) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.CustomGradientThumbRenderer
 
paintComponent(Graphics) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.CustomGradientTrackRenderer
 
paintComponent(Graphics) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.ThumbRenderer
 
paintComponent(Graphics) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.TrackRenderer
 
paintComponent(Graphics) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
paintComponent(Graphics) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl.ThumbRenderer
 
paintComponent(Graphics) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl.TrackRenderer
 
paintComponent(Graphics) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI.ThumbRenderer
 
paintComponent(Graphics) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI.TrackRenderer
 
paintComponent(Graphics) - Method in class org.hkijena.jipipe.ui.components.FormPanel.GroupHeaderPanel
 
paintComponent(Graphics) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
paintComponent(Graphics) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
paintContentBorderBottomEdge(Graphics, int, int, int, int, int, int) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
paintContentBorderLeftEdge(Graphics, int, int, int, int, int, int) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
paintContentBorderRightEdge(Graphics, int, int, int, int, int, int) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
paintContentBorderTopEdge(Graphics, int, int, int, int, int, int) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
paintDragOverlay(Graphics2D, int, int, int, int) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
paintDragOverlay(Graphics2D, int, int, int, int) - Method in class org.hkijena.jipipe.extensions.graphannotation.tools.ArrowAnnotationGraphNodeTool
 
paintEdge(Graphics2D, Point, Rectangle, Point, JIPipeGraphEdge.Shape, double, int, int, boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Draws an edge between source point and the target point
paintFocusIndicator(Graphics, int, Rectangle[], int, Rectangle, Rectangle, boolean) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
PaintGenerator - Interface in org.hkijena.jipipe.extensions.parameters.library.ranges
 
paintHighlightBelowTab() - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelColorMapIcon
 
paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.extensions.parameters.library.colors.ColorMapIcon
 
paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.extensions.plots.utils.ColorMapIcon
 
paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.ui.components.icons.AnimatedIcon
 
paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.ui.components.icons.MonochromeColorIcon
 
paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.ui.components.icons.NewThrobberIcon
 
paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.ui.components.icons.OverlayColorIcon
 
paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.ui.components.icons.SolidColorIcon
 
paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.ui.components.icons.ZoomIcon
 
paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.utils.ui.CheckBoxIcon
 
paintIcon(Component, Graphics, int, int) - Method in class org.hkijena.jipipe.utils.ui.CheckBoxMenuItemIcon
 
paintIndex - Variable in class org.hkijena.jipipe.extensions.plots.utils.ColorMapSupplier
 
paintLeftTabBorder(int, Graphics, int, int, int, int, int, int, boolean) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
paintMinimap(Graphics2D, int, int, int, int, BasicStroke, BasicStroke, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode
 
paintMinimap(Graphics2D, int, int, int, int, BasicStroke, BasicStroke, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ArrowAnnotationGraphNode
 
paintMiniMap(Graphics2D, double, int, int) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Draws a minimap of this canvas.
paintMinimap(Graphics2D, int, int, int, int, BasicStroke, BasicStroke, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeAnnotationGraphNodeUI
 
paintMinimap(Graphics2D, int, int, int, int, BasicStroke, BasicStroke, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
paintMouse(JIPipeGraphCanvasUI, Point, int, Graphics2D) - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeToggleableGraphEditorTool
 
paintNode(Graphics2D, JIPipeAnnotationGraphNodeUI, double) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode
 
paintNode(Graphics2D, JIPipeAnnotationGraphNodeUI, double) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode
 
paintNode(Graphics2D, JIPipeAnnotationGraphNodeUI, double) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ArrowAnnotationGraphNode
 
paintNode(Graphics2D) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeAnnotationGraphNodeUI
 
paintNode(Graphics2D) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
paintRightTabBorder(int, Graphics, int, int, int, int, int, int, boolean) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
paintShape(Graphics2D, JIPipeAnnotationGraphNodeUI, double) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode
 
paintShape(Graphics2D, JIPipeAnnotationGraphNodeUI, double) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode
 
paintShape(Graphics2D, JIPipeAnnotationGraphNodeUI, double) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.TextBoxAnnotationGraphNode
 
paintTabBackground(Graphics, int, int, int, int, int, int, boolean) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
paintTabBorder(Graphics, int, int, int, int, int, int, boolean) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
paintThumb(Graphics) - Method in class org.hkijena.jipipe.ui.theme.ModernSliderUI
 
paintTopTabBorder(int, Graphics, int, int, int, int, int, int, boolean) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
paintTrack(Graphics) - Method in class org.hkijena.jipipe.ui.theme.ModernSliderUI
 
PairOfPointsImageJ2ShapeData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.shapes
 
PairOfPointsImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.PairOfPointsImageJ2ShapeData
 
PairOfPointsImageJ2ShapeData(PairOfPointsImageJ2ShapeData) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.PairOfPointsImageJ2ShapeData
 
PairOfPointsImageJ2ShapeData(PairOfPointsShape) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.PairOfPointsImageJ2ShapeData
 
PairOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
Operator that is used to make different statements The return value is the right statement
PairOperator(int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.PairOperator
 
PairParameter<K,V> - Class in org.hkijena.jipipe.extensions.parameters.api.pairs
Parameter equivalent of a map entry.
PairParameter(Class<K>, Class<V>) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameter
 
PairParameter(PairParameter<K, V>) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameter
Creates a copy.
PairParameter.Deserializer<K,V> - Class in org.hkijena.jipipe.extensions.parameters.api.pairs
Deserializes the parameter
PairParameter.Serializer - Class in org.hkijena.jipipe.extensions.parameters.api.pairs
Serializes the parameter
PairParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.api.pairs
Editor for PairParameter
PairParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterEditorUI
Creates new instance
PairParameterKeyAccess<K,V> - Class in org.hkijena.jipipe.extensions.parameters.api.pairs
Parameter access for the key entry in PairParameter
PairParameterKeyAccess(JIPipeParameterAccess, PairParameter<K, V>) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterKeyAccess
Creates a new instance
PairParameterSettings - Annotation Type in org.hkijena.jipipe.extensions.parameters.api.pairs
Allows to control the behavior of PairParameter
PairParameterValueAccess<K,V> - Class in org.hkijena.jipipe.extensions.parameters.api.pairs
Parameter access for the key entry in PairParameter
PairParameterValueAccess(JIPipeParameterAccess, PairParameter<K, V>) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterValueAccess
Creates a new instance
panel - Variable in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
PARAM_BOTTOM - Static variable in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
 
PARAM_BOTTOM - Static variable in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
PARAM_HEIGHT - Static variable in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
 
PARAM_HEIGHT - Static variable in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
PARAM_LEFT - Static variable in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
 
PARAM_LEFT - Static variable in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
PARAM_RIGHT - Static variable in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
 
PARAM_RIGHT - Static variable in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
PARAM_TOP - Static variable in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
 
PARAM_TOP - Static variable in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
PARAM_WIDTH - Static variable in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
 
PARAM_WIDTH - Static variable in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
ParameterChangedEvent(Object, String) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterChangedEvent
 
ParameterChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterChangedEventEmitter
 
ParameterCollectionList - Class in org.hkijena.jipipe.extensions.parameters.library.collections
A list of multiple JIPipeParameterCollection items (internally JIPipeDynamicParameterCollection.
ParameterCollectionList() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionList
 
ParameterCollectionList(ParameterCollectionList) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionList
 
ParameterCollectionList.Deserializer - Class in org.hkijena.jipipe.extensions.parameters.library.collections
 
ParameterCollectionList.Serializer - Class in org.hkijena.jipipe.extensions.parameters.library.collections
 
ParameterCollectionListEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.collections
Generic parameter for ListParameter
ParameterCollectionListEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionListEditorUI
Creates new instance
ParameterCollectionListTemplate - Annotation Type in org.hkijena.jipipe.extensions.parameters.library.collections
Sets the template class for ParameterCollectionList.
parameterCollectionToJsonString(JIPipeParameterCollection) - Static method in class org.hkijena.jipipe.utils.SerializationUtils
Serializes a JIPipeParameterCollection into a JSON string
ParameterColumn() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ParameterColumn
Creates a new instance.
ParameterColumn(ParameterTable.ParameterColumn) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ParameterColumn
Creates a copy
ParameterColumn(String, String, Class<?>) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ParameterColumn
Creates a new instance
ParameterEntry(Set<Class<?>>) - Constructor for class org.hkijena.jipipe.ui.parameters.DynamicParameterEditorDialog.ParameterEntry
 
ParameterEntryListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.parameters.DynamicParameterEditorDialog.ParameterEntryListCellRenderer
Creates a new renderer
ParameterExplorerContextMenuAction - Class in org.hkijena.jipipe.extensions.utils.contextmenu
 
ParameterExplorerContextMenuAction() - Constructor for class org.hkijena.jipipe.extensions.utils.contextmenu.ParameterExplorerContextMenuAction
 
ParameterExplorerWindow - Class in org.hkijena.jipipe.ui.parameters
 
ParameterExplorerWindow(JIPipeWorkbench, JIPipeParameterCollection) - Constructor for class org.hkijena.jipipe.ui.parameters.ParameterExplorerWindow
 
ParameterFormData - Class in org.hkijena.jipipe.extensions.forms.datatypes
FormData that is put into a FormPanel
ParameterFormData() - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.ParameterFormData
 
ParameterFormData(ParameterFormData) - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.ParameterFormData
 
ParameterImageJ2ModuleInput<ModuleType,JIPipeType> - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.input
Handles input parameters (passed from/to JIPipe parameters)
ParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.ParameterImageJ2ModuleInput
 
ParameterImageJ2ModuleOutput<ModuleType,JIPipeType> - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.output
Handles input parameters (passed from/to JIPipe parameters)
ParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput
 
ParameterInfo - Class in org.hkijena.jipipe.extensions.expressions
Information about the parameters
ParameterInfo(String, String, Class<?>...) - Constructor for class org.hkijena.jipipe.extensions.expressions.ParameterInfo
 
ParameterModuleIO - Interface in org.hkijena.jipipe.extensions.imagej2.io.parameters
 
ParameterPanel - Class in org.hkijena.jipipe.ui.parameters
ParameterPanel(JIPipeWorkbench, JIPipeParameterCollection, JIPipeParameterTree, MarkdownDocument, int) - Constructor for class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
ParameterPanel(JIPipeWorkbench, JIPipeParameterCollection, MarkdownDocument, int) - Constructor for class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
ParameterReferenceGroupCollectionTreeCellRenderer - Class in org.hkijena.jipipe.ui.parameterreference
Renders an JIPipeDataSlot in a JTree
ParameterReferenceGroupCollectionTreeCellRenderer(GraphNodeParameterReferenceGroupCollectionEditorUI) - Constructor for class org.hkijena.jipipe.ui.parameterreference.ParameterReferenceGroupCollectionTreeCellRenderer
Creates a new renderer
ParameterReferencesChangedEvent - Class in org.hkijena.jipipe.api.grouping.events
Triggered by GraphNodeParameterReferenceGroupCollection and related classes
ParameterReferencesChangedEvent(Object) - Constructor for class org.hkijena.jipipe.api.grouping.events.ParameterReferencesChangedEvent
 
ParameterReferencesChangedEventEmitter - Class in org.hkijena.jipipe.api.grouping.events
 
ParameterReferencesChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.grouping.events.ParameterReferencesChangedEventEmitter
 
ParameterReferencesChangedEventListener - Interface in org.hkijena.jipipe.api.grouping.events
 
ParametersData - Class in org.hkijena.jipipe.extensions.multiparameters.datatypes
Stores the parameters of an algorithm
ParametersData() - Constructor for class org.hkijena.jipipe.extensions.multiparameters.datatypes.ParametersData
 
ParametersData.Deserializer - Class in org.hkijena.jipipe.extensions.multiparameters.datatypes
 
ParametersData.Serializer - Class in org.hkijena.jipipe.extensions.multiparameters.datatypes
Serializes ParametersData
ParametersDataToResultsTableDataConverter - Class in org.hkijena.jipipe.extensions.multiparameters.converters
 
ParametersDataToResultsTableDataConverter() - Constructor for class org.hkijena.jipipe.extensions.multiparameters.converters.ParametersDataToResultsTableDataConverter
 
ParametersDataViewer - Class in org.hkijena.jipipe.extensions.multiparameters.datatypes
 
ParametersDataViewer(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.datatypes.ParametersDataViewer
 
ParametersToAnnotationsAlgorithm - Class in org.hkijena.jipipe.extensions.multiparameters.nodes
 
ParametersToAnnotationsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.ParametersToAnnotationsAlgorithm
 
ParametersToAnnotationsAlgorithm(ParametersToAnnotationsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.nodes.ParametersToAnnotationsAlgorithm
 
parametersToPython(StringBuilder, JIPipeParameterCollection) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
Converts parameters into Python code.
parametersToR(StringBuilder, JIPipeParameterCollection) - Static method in class org.hkijena.jipipe.extensions.r.RUtils
Converts parameters into R code.
ParameterStructureChangedEvent(JIPipeParameterCollection) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterStructureChangedEvent
 
ParameterStructureChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterStructureChangedEventEmitter
 
parametersWereEdited() - Method in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderInserterUI
Checks if parameters were edited.
ParameterTable - Class in org.hkijena.jipipe.extensions.parameters.library.table
Table of other parameters
ParameterTable() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
Creates a new table
ParameterTable(ParameterTable) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
Creates a copy
ParameterTable.Deserializer - Class in org.hkijena.jipipe.extensions.parameters.library.table
Deserializes a ParameterTable
ParameterTable.ModelChangedEvent - Class in org.hkijena.jipipe.extensions.parameters.library.table
 
ParameterTable.ModelChangedEventEmitter - Class in org.hkijena.jipipe.extensions.parameters.library.table
 
ParameterTable.ModelChangedEventListener - Interface in org.hkijena.jipipe.extensions.parameters.library.table
 
ParameterTable.ParameterColumn - Class in org.hkijena.jipipe.extensions.parameters.library.table
Column in the parameter table
ParameterTable.Serializer - Class in org.hkijena.jipipe.extensions.parameters.library.table
Serializes a ParameterTable
ParameterTableCellAccess - Class in org.hkijena.jipipe.extensions.parameters.library.table
Implements the access to table cell
ParameterTableCellAccess(JIPipeParameterAccess, ParameterTable, int, int) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableCellAccess
Creates a new instance
ParameterTableEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.table
ParameterTableEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableEditorUI
Creates new instance
ParameterTableEditorWindow - Class in org.hkijena.jipipe.extensions.parameters.library.table
 
ParameterTesterJIPipeMenuExtension - Class in org.hkijena.jipipe.extensions.parameters
Adds an entry "New table" to the JIPipe menu
ParameterTesterJIPipeMenuExtension(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.parameters.ParameterTesterJIPipeMenuExtension
Creates a new instance
parameterToSetting(Object) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.io.DefaultSettingsIO
 
parameterToSetting(Object) - Method in interface org.hkijena.jipipe.extensions.ijtrackmate.io.SettingsIO
 
parameterToSetting(Object) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.io.SpotFeaturePenaltyParameterListSettingsIO
 
ParameterTreeUI - Class in org.hkijena.jipipe.ui.components
Displays the contents of JIPipeParameterTree.
ParameterTreeUI() - Constructor for class org.hkijena.jipipe.ui.components.ParameterTreeUI
Creates a new empty instance
ParameterTreeUI(JIPipeParameterTree) - Constructor for class org.hkijena.jipipe.ui.components.ParameterTreeUI
Creates a new instance
ParameterTreeUI.Renderer - Class in org.hkijena.jipipe.ui.components
Renders the entries
ParameterUIChangedEvent(JIPipeParameterCollection) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterUIChangedEvent
 
ParameterUIChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterUIChangedEventEmitter
 
ParameterUITester - Class in org.hkijena.jipipe.utils
UI that shows all parameter types
ParameterUITester(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.utils.ParameterUITester
Creates a new instance
ParameterUtils - Class in org.hkijena.jipipe.utils
 
ParameterValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts
 
ParameterValidationReportContext(JIPipeParameterCollection, String, String) - Constructor for class org.hkijena.jipipe.api.validation.contexts.ParameterValidationReportContext
 
ParameterValidationReportContext(JIPipeValidationReportContext, JIPipeParameterCollection, String, String) - Constructor for class org.hkijena.jipipe.api.validation.contexts.ParameterValidationReportContext
 
parse(String) - Static method in class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
Parses a quantity from a string
PARSE_COLOR_DESCRIPTION - Static variable in class org.hkijena.jipipe.utils.ColorUtils
 
PARSE_QUANTITY_PATTERN - Static variable in class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 
parseColor(String) - Static method in class org.hkijena.jipipe.utils.ColorUtils
Parses a color
parseDouble(String) - Static method in class org.hkijena.jipipe.utils.StringUtils
 
parseFloat(String) - Static method in class org.hkijena.jipipe.utils.StringUtils
 
parseJsonAxes(String) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.ImgUtils
Parse axes from JSON string.
ParseJsonFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
ParseJsonFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.ParseJsonFunction
 
parseVariableAssignment(JIPipeExpressionVariablesMap, JIPipeExpressionVariablesMap, String) - Static method in class org.hkijena.jipipe.extensions.expressions.functions.EvaluateFunction
 
passParametersToPython(PythonInterpreter, JIPipeCustomParameterCollection) - Static method in class org.hkijena.jipipe.utils.scripting.JythonUtils
 
PasswordParameter - Class in org.hkijena.jipipe.extensions.parameters.library.auth
A parameter that stores a password
PasswordParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.auth.PasswordParameter
 
PasswordParameter(String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.auth.PasswordParameter
 
PasswordParameter(PasswordParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.auth.PasswordParameter
 
PasswordParameter.Deserializer - Class in org.hkijena.jipipe.extensions.parameters.library.auth
 
PasswordParameter.Serializer - Class in org.hkijena.jipipe.extensions.parameters.library.auth
 
PasswordParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.auth
Parameter editor for String
PasswordParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.auth.PasswordParameterEditorUI
 
pasteNodes(String) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
pasteNodes(JIPipeGraph) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
path - Variable in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetDescription
Internal dataset path in a file.
path - Variable in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetEntryProvider.DatasetEntry
 
PathCombineFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.filesystem
 
PathCombineFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.filesystem.PathCombineFunction
 
PathData - Class in org.hkijena.jipipe.extensions.filesystem.dataypes
Encapsulates a Path
PathData(Path) - Constructor for class org.hkijena.jipipe.extensions.filesystem.dataypes.PathData
Initializes file data from a file
PathData(String) - Constructor for class org.hkijena.jipipe.extensions.filesystem.dataypes.PathData
 
PathData() - Constructor for class org.hkijena.jipipe.extensions.filesystem.dataypes.PathData
 
PathDataFromTableImageJImporter - Class in org.hkijena.jipipe.extensions.filesystem.compat
 
PathDataFromTableImageJImporter(Class<? extends PathData>) - Constructor for class org.hkijena.jipipe.extensions.filesystem.compat.PathDataFromTableImageJImporter
 
PathDataImporterUI - Class in org.hkijena.jipipe.extensions.filesystem.compat
Imports PathData
PathDataImporterUI(JIPipeWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.extensions.filesystem.compat.PathDataImporterUI
 
PathDataSource - Class in org.hkijena.jipipe.extensions.filesystem.datasources
Provides an input file
PathDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.PathDataSource
Initializes the algorithm
PathDataSource(PathDataSource) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.PathDataSource
Copies the algorithm
PathDataToJIPipeOutputConverter - Class in org.hkijena.jipipe.extensions.utils.datatypes
 
PathDataToJIPipeOutputConverter() - Constructor for class org.hkijena.jipipe.extensions.utils.datatypes.PathDataToJIPipeOutputConverter
 
PathDataToTableImageJExporter - Class in org.hkijena.jipipe.extensions.filesystem.compat
 
PathDataToTableImageJExporter() - Constructor for class org.hkijena.jipipe.extensions.filesystem.compat.PathDataToTableImageJExporter
 
PathEditor - Class in org.hkijena.jipipe.ui.components
Text field with a file selection
PathEditor() - Constructor for class org.hkijena.jipipe.ui.components.PathEditor
Creates a new file selection that opens a file
PathEditor(PathIOMode, PathType) - Constructor for class org.hkijena.jipipe.ui.components.PathEditor
 
PathExistsFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.filesystem
 
PathExistsFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.filesystem.PathExistsFunction
 
PathFilterExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.expressions.variables
ExpressionParameterVariablesInfo that defines one variable 'x' that references a filesystem path or file name.
PathFilterExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.expressions.variables.PathFilterExpressionParameterVariablesInfo
 
PathFormData - Class in org.hkijena.jipipe.extensions.forms.datatypes
 
PathFormData() - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
PathFormData(PathFormData) - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
PathFormGeneratorAlgorithm - Class in org.hkijena.jipipe.extensions.forms.algorithms.generators
 
PathFormGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.generators.PathFormGeneratorAlgorithm
 
PathFormGeneratorAlgorithm(PathFormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.generators.PathFormGeneratorAlgorithm
 
PathFromUserDataSource - Class in org.hkijena.jipipe.extensions.filesystem.datasources
 
PathFromUserDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.PathFromUserDataSource
 
PathFromUserDataSource(PathFromUserDataSource) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.PathFromUserDataSource
 
PathImageJDataExporterUI - Class in org.hkijena.jipipe.api.compat.ui
 
PathImageJDataExporterUI(JIPipeWorkbench, ImageJDataExportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ui.PathImageJDataExporterUI
 
PathImageJDataImporterUI - Class in org.hkijena.jipipe.api.compat.ui
 
PathImageJDataImporterUI(JIPipeWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.api.compat.ui.PathImageJDataImporterUI
 
PathIOMode - Enum in org.hkijena.jipipe.utils
Determines if a path is opened or saved
PathList - Class in org.hkijena.jipipe.extensions.parameters.library.filesystem
Collection of paths.
PathList() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.filesystem.PathList
Creates a new instance
PathList(Collection<Path>) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.filesystem.PathList
Creates a copy
PathListCellRenderer - Class in org.hkijena.jipipe.ui.components.renderers
 
PathListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.components.renderers.PathListCellRenderer
 
PathListDataSource - Class in org.hkijena.jipipe.extensions.filesystem.datasources
Provides an input folder
PathListDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.PathListDataSource
Creates a new instance
PathListDataSource(PathListDataSource) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.PathListDataSource
Copies the algorithm
PathParameterSettings - Annotation Type in org.hkijena.jipipe.extensions.parameters.library.filesystem
Attached to the getter or setter of Path parameter to setup the GUI
PathQueryExpression - Class in org.hkijena.jipipe.extensions.expressions
Expression for querying strings
PathQueryExpression() - Constructor for class org.hkijena.jipipe.extensions.expressions.PathQueryExpression
 
PathQueryExpression(String) - Constructor for class org.hkijena.jipipe.extensions.expressions.PathQueryExpression
 
PathQueryExpression(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.extensions.expressions.PathQueryExpression
 
PathsToJIPipeProjectParametersAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms.meta
 
PathsToJIPipeProjectParametersAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.meta.PathsToJIPipeProjectParametersAlgorithm
 
PathsToJIPipeProjectParametersAlgorithm(PathsToJIPipeProjectParametersAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.meta.PathsToJIPipeProjectParametersAlgorithm
 
PathType - Enum in org.hkijena.jipipe.utils
Determines the type of selected path
PathUtils - Class in org.hkijena.jipipe.utils
Utilities for handling paths
PencilMaskDrawer2DTool - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer
 
PencilMaskDrawer2DTool(MaskDrawerPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PencilMaskDrawer2DTool
 
PencilMaskDrawer2DTool.PencilShape - Enum in org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer
 
percentage(String) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
PercentageFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.math
 
PercentageFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.math.PercentageFunction
 
PercentileFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
PercentileFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.PercentileFunction
 
PercentileThreshold8U2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
Wrapper around ImageProcessor
PercentileThreshold8U2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.PercentileThreshold8U2DAlgorithm
Instantiates a new node type.
PercentileThreshold8U2DAlgorithm(PercentileThreshold8U2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.PercentileThreshold8U2DAlgorithm
Instantiates a new node type.
PeriodicImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds
 
PeriodicImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.PeriodicImageJ2OutOfBoundsFactoryData
 
PeriodicImageJ2OutOfBoundsFactoryData(OutOfBoundsPeriodicFactory<?, ?>) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.PeriodicImageJ2OutOfBoundsFactoryData
 
PeriodicImageJ2OutOfBoundsFactoryData(PeriodicImageJ2OutOfBoundsFactoryData) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.PeriodicImageJ2OutOfBoundsFactoryData
 
PeriodicLineImageJ2ShapeData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.shapes
 
PeriodicLineImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData
 
PeriodicLineImageJ2ShapeData(PeriodicLineImageJ2ShapeData) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData
 
PeriodicLineImageJ2ShapeData(PeriodicLineShape) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData
 
Phansalkar(ImageProcessor, int, double, double, double, double, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm
 
PhansalkarLocalAutoThreshold2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local
Segmenter node that thresholds via an auto threshold Based on code from Auto_Local_Threshold
PhansalkarLocalAutoThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm
 
PhansalkarLocalAutoThreshold2DAlgorithm(PhansalkarLocalAutoThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm
 
pickAddSlotAtMousePosition(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
PickDynamicEnumValueDialog<T> - Class in org.hkijena.jipipe.ui.components
UI that adds slots to an algorithm
PickDynamicEnumValueDialog(Window, DynamicEnumParameter<T>, T) - Constructor for class org.hkijena.jipipe.ui.components.PickDynamicEnumValueDialog
 
PickEnumValueDialog - Class in org.hkijena.jipipe.ui.components
UI that adds slots to an algorithm
PickEnumValueDialog(Window, List<Object>, EnumItemInfo, Object) - Constructor for class org.hkijena.jipipe.ui.components.PickEnumValueDialog
 
PickerDialog<T> - Class in org.hkijena.jipipe.ui.components.pickers
UI for picking a set of values
PickerDialog(Window) - Constructor for class org.hkijena.jipipe.ui.components.pickers.PickerDialog
 
PickNodeDialog - Class in org.hkijena.jipipe.ui.components.pickers
UI that adds slots to an algorithm
PickNodeDialog(Window, Set<JIPipeGraphNode>, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.ui.components.pickers.PickNodeDialog
 
pickNodeUI(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
pickOrGenerateColumn(ResultsTableData) - Method in class org.hkijena.jipipe.extensions.expressions.TableColumnSourceExpressionParameter
Picks or generates a table column based on selecting by name, matching one column by boolean expressions, or using a mathematical expression.
pickSlotAtMousePosition(MouseEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
pickSlotAtMousePosition(Point) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
Pie2DPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
Generates a Pie chart Series table columns: Amount (Double), Category (String) Multiple series: No
Pie2DPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.Pie2DPlotData
Creates a new instance
Pie2DPlotData(Pie2DPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.Pie2DPlotData
Creates a copy
Pie3DPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
Generates a Pie chart Series table columns: Amount (Double), Category (String) Multiple series: No
Pie3DPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.Pie3DPlotData
Creates a new instance
Pie3DPlotData(Pie3DPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.Pie3DPlotData
Creates a copy
PiePlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
Contains data for pie plots.
PiePlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.PiePlotData
Creates a new instance
PiePlotData(PiePlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.PiePlotData
Creates a copy
PipelineRenderPlugin - Class in org.hkijena.jipipe.extensions.pipelinerender
Extension containing some additional tools
PipelineRenderPlugin() - Constructor for class org.hkijena.jipipe.extensions.pipelinerender.PipelineRenderPlugin
 
PipelineRenderTool - Class in org.hkijena.jipipe.extensions.pipelinerender
 
PipelineRenderTool(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.pipelinerender.PipelineRenderTool
Creates a new instance
PixelCoordinate2DExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
Variable source that allows to address x, y
PixelCoordinate2DExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.PixelCoordinate2DExpressionParameterVariablesInfo
 
PixelCoordinate5DExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
Variable source that allows to address x, y
PixelCoordinate5DExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.PixelCoordinate5DExpressionParameterVariablesInfo
 
PixelHoverEvent(ImageViewerPanelCanvas2D, Point, MouseEvent) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.PixelHoverEvent
 
PixelHoverEventEmitter() - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.PixelHoverEventEmitter
 
PixelInfoPlugin2D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d
 
PixelInfoPlugin2D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.PixelInfoPlugin2D
 
pixelsToUnit(Quantity, Quantity, Quantity, String) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.Point3d
 
place(Rectangle, Rectangle, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
Generates the rectangle defined by the definition.
placeInside(Rectangle, Rectangle) - Method in enum org.hkijena.jipipe.extensions.parameters.library.roi.Anchor
Places the inner rectangle into the outer rectangle according to the anchor
PlotColumn - Annotation Type in org.hkijena.jipipe.extensions.plots.datatypes
Defines that a PlotData has
PlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
Contains all necessary data to generate a plot
PlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
Creates a new empty instance
PlotData(PlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
Creates a copy of the provided data
PlotData.Serializer - Class in org.hkijena.jipipe.extensions.plots.datatypes
Serializes the metadata of PlotData
PlotDataClassFilter - Class in org.hkijena.jipipe.ui.plotbuilder
 
PlotDataClassFilter() - Constructor for class org.hkijena.jipipe.ui.plotbuilder.PlotDataClassFilter
 
PlotDataSeries - Class in org.hkijena.jipipe.extensions.plots.datatypes
A data series (table) that is rendered as plot series
PlotDataSeries() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.PlotDataSeries
Creates a new instance with a null table
PlotDataSeries(ResultsTable) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.PlotDataSeries
Creates a new instance from a ResultsTable
PlotDataSeries(PlotDataSeries) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.PlotDataSeries
Creates a copy
PlotDataSeries.Deserializer - Class in org.hkijena.jipipe.extensions.plots.datatypes
 
PlotDataSeries.Serializer - Class in org.hkijena.jipipe.extensions.plots.datatypes
 
PlotDataSeriesColumnListCellRenderer - Class in org.hkijena.jipipe.ui.plotbuilder
Renders entries
PlotDataSeriesColumnListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.plotbuilder.PlotDataSeriesColumnListCellRenderer
Creates a new renderer
PlotDataSlotPreview - Class in org.hkijena.jipipe.extensions.plots.ui.resultanalysis
Renders a plot data as table cell
PlotDataSlotPreview(JIPipeProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableMetadataRow, JIPipeExportedDataAnnotation) - Constructor for class org.hkijena.jipipe.extensions.plots.ui.resultanalysis.PlotDataSlotPreview
Creates a new renderer
PlotEditor - Class in org.hkijena.jipipe.ui.plotbuilder
User interface for displaying and creating plots
PlotEditor(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
 
PlotExporterDialog - Class in org.hkijena.jipipe.ui.components
Dialog that exports plots as image
PlotExporterDialog(JFreeChart) - Constructor for class org.hkijena.jipipe.ui.components.PlotExporterDialog
 
PlotMetadata - Annotation Type in org.hkijena.jipipe.extensions.plots.datatypes
Annotates a PlotData with information about plots
PlotReader - Class in org.hkijena.jipipe.ui.components
Displays a plot
PlotReader(PlotEditor) - Constructor for class org.hkijena.jipipe.ui.components.PlotReader
Creates a new instance
PlotsPlugin - Class in org.hkijena.jipipe.extensions.plots
Provides a standard selection of plots
PlotsPlugin() - Constructor for class org.hkijena.jipipe.extensions.plots.PlotsPlugin
 
PlotTables2Algorithm - Class in org.hkijena.jipipe.extensions.plots.nodes
Algorithm that creates PlotData from ResultsTableData This is an improved version of PlotTables2Algorithm that is linked directly to a specific plot
PlotTables2Algorithm(PlotTables2AlgorithmInfo) - Constructor for class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2Algorithm
Creates a new instance
PlotTables2Algorithm(PlotTables2Algorithm) - Constructor for class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2Algorithm
Creates a copy
PlotTables2AlgorithmInfo - Class in org.hkijena.jipipe.extensions.plots.nodes
 
PlotTables2AlgorithmInfo(JIPipeDataInfo) - Constructor for class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2AlgorithmInfo
 
PlotTablesAlgorithm - Class in org.hkijena.jipipe.extensions.plots.nodes
Deprecated.
Instead, the new dynamically generated plotting should be utilized
PlotTablesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.plots.nodes.PlotTablesAlgorithm
Deprecated.
Creates a new instance
PlotTablesAlgorithm(PlotTablesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.plots.nodes.PlotTablesAlgorithm
Deprecated.
Creates a copy
PlotTablesAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.plots.nodes
Deprecated.
 
PlotToImageTypeConverter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms
 
PlotToImageTypeConverter() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.PlotToImageTypeConverter
 
PlotToTableConverter - Class in org.hkijena.jipipe.extensions.plots.converters
 
PlotToTableConverter() - Constructor for class org.hkijena.jipipe.extensions.plots.converters.PlotToTableConverter
 
PluginCategoriesEnumParameter - Class in org.hkijena.jipipe.extensions.parameters.library.jipipe
Categories enum (editable) that is used in metadata
PluginCategoriesEnumParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
PluginCategoriesEnumParameter(DynamicStringEnumParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
PluginCategoriesEnumParameter(String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter
 
PluginCategoriesEnumParameter.List - Class in org.hkijena.jipipe.extensions.parameters.library.jipipe
 
PMCCBlockFlowAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow
Adapted from PMCCBlockFlow, as the methods there are all protected/private
PMCCBlockFlowAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm
 
PMCCBlockFlowAlgorithm(PMCCBlockFlowAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm
 
Point3d - Class in org.hkijena.jipipe.extensions.ijfilaments.util
 
Point3d() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.util.Point3d
 
Point3d(double, double, double) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.util.Point3d
 
Point3d(Point3d) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.util.Point3d
 
pointInCanvas(Point3d, Point2d) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Calculates where the specified point in the vworld space is placed on the canvas and stores the result in the specified Point2d.
PointRange - Class in org.hkijena.jipipe.utils
Stores three points, representing the center point, and an area around it All values are absolute.
PointRange() - Constructor for class org.hkijena.jipipe.utils.PointRange
Creates a new point range at 0, 0 without areas around them
PointRange(PointRange) - Constructor for class org.hkijena.jipipe.utils.PointRange
 
PointRange(int, int) - Constructor for class org.hkijena.jipipe.utils.PointRange
Creates a new point range without margins around it
PointRange(Point, Point, Point) - Constructor for class org.hkijena.jipipe.utils.PointRange
Creates a point range and initializes all values
PolygonMaskDrawer2DTool - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer
Polygon drawing Allows left-click canvas dragging
PolygonMaskDrawer2DTool(MaskDrawerPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PolygonMaskDrawer2DTool
 
PortableCellposeEnvInstaller - Class in org.hkijena.jipipe.extensions.cellpose.installers
 
PortableCellposeEnvInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.cellpose.installers.PortableCellposeEnvInstaller
 
PortableCellposeEnvInstaller.Configuration - Class in org.hkijena.jipipe.extensions.cellpose.installers
 
PortableCellposeGPUEnvInstaller - Class in org.hkijena.jipipe.extensions.cellpose.installers
 
PortableCellposeGPUEnvInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.cellpose.installers.PortableCellposeGPUEnvInstaller
 
PortableCellposeGPUEnvInstaller.Configuration - Class in org.hkijena.jipipe.extensions.cellpose.installers
 
PortableEnvPythonInstaller - Class in org.hkijena.jipipe.extensions.python.installers
 
PortableEnvPythonInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.python.installers.PortableEnvPythonInstaller
 
PortableEnvPythonInstaller.Configuration - Class in org.hkijena.jipipe.extensions.python.installers
 
postMaskChangedEvent() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawer2DTool
Posts a mask changed event to the viewer' canvas event bus
postprocess(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.cellpose.CellposePlugin
 
postprocess(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ilastik.IlastikPlugin
 
postprocess(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.ImageJAlgorithmsPlugin
 
postprocess(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omnipose.OmniposePlugin
 
postprocess(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.plots.PlotsPlugin
 
postprocess(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.python.PythonPlugin
 
postprocess(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.r.RPlugin
 
postprocess(JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.JIPipeJavaPlugin
Called after registration.
postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D
 
postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D
 
postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D
 
postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin2D
Called after the image has been drawn after the image has been drawn
postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.EllipseMaskDrawer2DTool
 
postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PencilMaskDrawer2DTool
 
postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PolygonMaskDrawer2DTool
 
postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.RectangleMaskDrawer2DTool
 
postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIPicker2DTool
 
postprocessDraw(Graphics2D, Rectangle, ImageSliceIndex) - Method in interface org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2DTool
Called after the image has been drawn after the image has been drawn
postprocessDrawForExport(BufferedImage, ImageSliceIndex, double) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D
 
postprocessDrawForExport(BufferedImage, ImageSliceIndex, double) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D
 
postprocessDrawForExport(BufferedImage, ImageSliceIndex, double) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D
 
postprocessDrawForExport(BufferedImage, ImageSliceIndex, double) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin2D
Called while exporting the image slice.
postprocessDrawForExport(BufferedImage, ImageSliceIndex, double) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
postprocessDrawForExport(BufferedImage, ImageSliceIndex, double) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
postprocessInstall() - Method in class org.hkijena.jipipe.extensions.cellpose.installers.MinicondaCellposeEnvInstaller
 
postprocessInstall() - Method in class org.hkijena.jipipe.extensions.cellpose.installers.MinicondaCellposeGPUEnvInstaller
 
postprocessInstall() - Method in class org.hkijena.jipipe.extensions.cellpose.installers.PortableCellposeEnvInstaller
 
postprocessInstall() - Method in class org.hkijena.jipipe.extensions.cellpose.installers.PortableCellposeGPUEnvInstaller
 
postprocessInstall() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
Applies postprocessing for the installation
postprocessInstall() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller
Applies postprocessing for the installation
postprocessInstall() - Method in class org.hkijena.jipipe.extensions.python.installers.MinicondaEnvPythonInstaller
 
postprocessInstall() - Method in class org.hkijena.jipipe.extensions.python.installers.PortableEnvPythonInstaller
 
preferredLayoutSize(Container) - Method in class org.hkijena.jipipe.ui.components.layouts.ModifiedFlowLayout
 
preferredLayoutSize(Container) - Method in class org.hkijena.jipipe.ui.components.WrapLayout
Returns the preferred dimensions for this layout given the visible components in the specified target container.
PrefixedIconListCellRenderer - Class in org.hkijena.jipipe.ui.components.renderers
Renders entries in JIPipeIconPickerDialog
PrefixedIconListCellRenderer(String) - Constructor for class org.hkijena.jipipe.ui.components.renderers.PrefixedIconListCellRenderer
 
preprocess(ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin3D
 
PrettifyXMLAlgorithm - Class in org.hkijena.jipipe.extensions.strings.nodes.xml
 
PrettifyXMLAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.xml.PrettifyXMLAlgorithm
 
PrettifyXMLAlgorithm(PrettifyXMLAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.xml.PrettifyXMLAlgorithm
 
prettyPrint(String, int, boolean) - Static method in class org.hkijena.jipipe.utils.xml.XmlUtils
 
preview(int, int) - Method in interface org.hkijena.jipipe.api.data.JIPipeData
Deprecated.
preview(int, int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
preview(int, int) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeWeakDataReferenceData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.filesystem.dataypes.PathData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.FormData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotsCollectionData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.ImageJ2DatasetData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorHSBData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorLABData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorHSBData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorLABData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorHSBData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorLABData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorHSBData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorLABData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorHSBData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorLABData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.LUTData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.OMEImageData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
preview(int, int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
previousSlide() - Method in class org.hkijena.jipipe.utils.ui.DotSlideshow
 
PRIMARY1 - Static variable in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
 
PRIMARY1 - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
PRIMARY2 - Static variable in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
 
PRIMARY2 - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
PRIMARY3 - Static variable in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
 
PRIMARY3 - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
PRIMARY4 - Static variable in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
 
PRIMARY4 - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
PRIMARY5 - Static variable in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
 
PRIMARY5 - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
PRIMARY6 - Static variable in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
 
PRIMARY6 - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
print() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReport
Prints messages to the standard error
PrintFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.util
 
PrintFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.util.PrintFunction
 
process(ImagePlus, Morphology.Operation, Strel3D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm
 
process(List<String>) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Hough_Circle
 
process(List<Object>) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunWorker
 
processComponentKeyEvent(KeyEvent) - Method in class org.hkijena.jipipe.ui.components.RSyntaxTextField
 
ProcessEnvironment - Class in org.hkijena.jipipe.extensions.processes
 
ProcessEnvironment() - Constructor for class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
ProcessEnvironment(ProcessEnvironment) - Constructor for class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
ProcessEnvironment.List - Class in org.hkijena.jipipe.extensions.processes
ProcessEnvironment.VariablesInfo - Class in org.hkijena.jipipe.extensions.processes
 
ProcessEnvironmentVariablesInfo - Class in org.hkijena.jipipe.extensions.utils.algorithms.processes
 
ProcessEnvironmentVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.processes.ProcessEnvironmentVariablesInfo
 
ProcessesExtensionSettings - Class in org.hkijena.jipipe.extensions.processes
 
ProcessesExtensionSettings() - Constructor for class org.hkijena.jipipe.extensions.processes.ProcessesExtensionSettings
 
ProcessesPlugin - Class in org.hkijena.jipipe.extensions.processes
 
ProcessesPlugin() - Constructor for class org.hkijena.jipipe.extensions.processes.ProcessesPlugin
 
processMouseEvent(MouseEvent) - Method in class org.hkijena.jipipe.utils.ui.ViewOnlyMenuItem
 
ProcessTextDataAlgorithm - Class in org.hkijena.jipipe.extensions.strings.nodes.text
 
ProcessTextDataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.text.ProcessTextDataAlgorithm
 
ProcessTextDataAlgorithm(ProcessTextDataAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.text.ProcessTextDataAlgorithm
 
ProcessTree(Process, JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree
 
ProcessUtils - Class in org.hkijena.jipipe.utils
 
ProcessUtils.ExtendedExecutor - Class in org.hkijena.jipipe.utils
 
ProcessUtils.ProcessTree - Class in org.hkijena.jipipe.utils
Wrapper around an existing process that models a process tree
ProcessUtils.RunCancellationExecuteWatchdog - Class in org.hkijena.jipipe.utils
Based on ExecuteWatchdog.
ProcessUtils.RunCancellationWatchdog - Class in org.hkijena.jipipe.utils
A watchdog that monitors a sub-process of a JIPipeRunnable and watches for the JIPipeRunnable to be cancelled.
ProcessUtils.RunCancellationWatchdog.CancelledEvent - Class in org.hkijena.jipipe.utils
 
ProcessUtils.RunCancellationWatchdog.CancelledEventEmitter - Class in org.hkijena.jipipe.utils
 
ProcessUtils.RunCancellationWatchdog.CancelledEventListener - Interface in org.hkijena.jipipe.utils
 
ProgressAdapter - Class in org.hkijena.jipipe.ui.ijupdater
Adapter between JIPipe and ImageJ progress implementations
ProgressAdapter(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.ui.ijupdater.ProgressAdapter
 
ProgressEvent(JIPipeRunWorker, JIPipeProgressInfo.StatusUpdatedEvent) - Constructor for class org.hkijena.jipipe.api.JIPipeRunnable.ProgressEvent
 
ProgressEventEmitter() - Constructor for class org.hkijena.jipipe.api.JIPipeRunnable.ProgressEventEmitter
 
PROJECT_TYPE - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
PROJECT_TYPE - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm
 
PROJECT_TYPES - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
PROJECT_TYPES - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
PROJECT_TYPES - Static variable in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
ProjectOpenedEvent(Path) - Constructor for class org.hkijena.jipipe.ui.documentation.RecentProjectsListPanel.ProjectOpenedEvent
 
ProjectOpenedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.documentation.RecentProjectsListPanel.ProjectOpenedEventEmitter
 
ProjectsSettings - Class in org.hkijena.jipipe.extensions.settings
Remembers the last projects
ProjectsSettings() - Constructor for class org.hkijena.jipipe.extensions.settings.ProjectsSettings
 
ProjectsSettings.ProjectTemplateEnum - Class in org.hkijena.jipipe.extensions.settings
An enum of strings that point to JIPipeProjectTemplate
projectSupports(Path, String) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.IlastikUtils
 
ProjectTemplateDownloaderDialog - Class in org.hkijena.jipipe.ui.project.templatedownloader
 
ProjectTemplateDownloaderDialog(ProjectTemplateDownloaderRun) - Constructor for class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderDialog
 
ProjectTemplateDownloaderPackage - Class in org.hkijena.jipipe.ui.project.templatedownloader
 
ProjectTemplateDownloaderPackage() - Constructor for class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderPackage
 
ProjectTemplateDownloaderRepository - Class in org.hkijena.jipipe.ui.project.templatedownloader
 
ProjectTemplateDownloaderRepository() - Constructor for class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderRepository
 
ProjectTemplateDownloaderRun - Class in org.hkijena.jipipe.ui.project.templatedownloader
 
ProjectTemplateDownloaderRun(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderRun
 
ProjectTemplateEnum() - Constructor for class org.hkijena.jipipe.extensions.settings.ProjectsSettings.ProjectTemplateEnum
 
ProjectTemplateEnum(ProjectsSettings.ProjectTemplateEnum) - Constructor for class org.hkijena.jipipe.extensions.settings.ProjectsSettings.ProjectTemplateEnum
 
ProjectUserFolderDataSource - Class in org.hkijena.jipipe.extensions.filesystem.datasources
 
ProjectUserFolderDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.ProjectUserFolderDataSource
 
ProjectUserFolderDataSource(ProjectUserFolderDataSource) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.ProjectUserFolderDataSource
 
propertyChange(PropertyChangeEvent) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
PruneBackupsRun - Class in org.hkijena.jipipe.api.backups
 
PruneBackupsRun(boolean, boolean) - Constructor for class org.hkijena.jipipe.api.backups.PruneBackupsRun
 
pruneEmptySessions(Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.api.backups.PruneBackupsRun
 
pull() - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageData
Extracts ImagePlusData from the GPU memory
PullDataTableAnnotations - Class in org.hkijena.jipipe.extensions.utils.algorithms.datatable
 
PullDataTableAnnotations(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PullDataTableAnnotations
 
PullDataTableAnnotations(PullDataTableAnnotations) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PullDataTableAnnotations
 
push(JIPipeNotification) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox
 
PushDataTableAnnotations - Class in org.hkijena.jipipe.extensions.utils.algorithms.datatable
 
PushDataTableAnnotations(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PushDataTableAnnotations
 
PushDataTableAnnotations(PushDataTableAnnotations) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PushDataTableAnnotations
 
PushedEvent(JIPipeNotificationInbox, JIPipeNotification) - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.PushedEvent
 
PushedEventEmitter() - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.PushedEventEmitter
 
pushToLog(JIPipeRunnableLogEntry) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogsCollection
 
put(ImageSliceIndex, BufferedImage) - Method in class org.hkijena.jipipe.extensions.imp.utils.ImpImageDataBuilder
 
put(int, int, int, BufferedImage) - Method in class org.hkijena.jipipe.extensions.imp.utils.ImpImageDataBuilder
 
putAnnotations(Map<String, JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionVariablesMap
Puts annotations into the variables
putAnnotations(List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionVariablesMap
Puts annotations into the variables
putColumn(ImageProcessor, int, int, float[], int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Reslicer
 
putCustomVariables(JIPipeCustomExpressionVariablesParameter) - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionVariablesMap
Puts custom expression parameters (with default settings)
putProjectDirectories(Path, Map<String, Path>) - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionVariablesMap
Puts the project-related directories into the variables
putRow(ImageProcessor, int, int, float[], int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Reslicer
 
putToMap(ImageHandler, int, int, Map<ImageSliceIndex, ImageProcessor>) - Static method in class org.hkijena.jipipe.extensions.ij3d.IJ3DUtils
 
PythonAdapterExtensionSettings - Class in org.hkijena.jipipe.extensions.python.adapter
 
PythonAdapterExtensionSettings() - Constructor for class org.hkijena.jipipe.extensions.python.adapter.PythonAdapterExtensionSettings
 
PythonArgumentsVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.python.PythonEnvironment.PythonArgumentsVariablesInfo
 
PythonEasyInstaller - Class in org.hkijena.jipipe.extensions.python.installers
 
PythonEasyInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.python.installers.PythonEasyInstaller
 
PythonEnvironment - Class in org.hkijena.jipipe.extensions.python
Parameter that describes a Python environment
PythonEnvironment() - Constructor for class org.hkijena.jipipe.extensions.python.PythonEnvironment
 
PythonEnvironment(PythonEnvironmentType, JIPipeExpressionParameter, Path) - Constructor for class org.hkijena.jipipe.extensions.python.PythonEnvironment
 
PythonEnvironment(PythonEnvironment) - Constructor for class org.hkijena.jipipe.extensions.python.PythonEnvironment
 
PythonEnvironment.List - Class in org.hkijena.jipipe.extensions.python
PythonEnvironment.PythonArgumentsVariablesInfo - Class in org.hkijena.jipipe.extensions.python
 
PythonEnvironmentType - Enum in org.hkijena.jipipe.extensions.python
The supported Python environment types
PythonExtensionSettings - Class in org.hkijena.jipipe.extensions.python
 
PythonExtensionSettings() - Constructor for class org.hkijena.jipipe.extensions.python.PythonExtensionSettings
 
PythonPackageLibraryEnvironment - Class in org.hkijena.jipipe.extensions.python
An environment-like type that points to a package
PythonPackageLibraryEnvironment() - Constructor for class org.hkijena.jipipe.extensions.python.PythonPackageLibraryEnvironment
 
PythonPackageLibraryEnvironment(PythonPackageLibraryEnvironment) - Constructor for class org.hkijena.jipipe.extensions.python.PythonPackageLibraryEnvironment
 
PythonPlugin - Class in org.hkijena.jipipe.extensions.python
Python nodes
PythonPlugin() - Constructor for class org.hkijena.jipipe.extensions.python.PythonPlugin
 
PythonScript - Class in org.hkijena.jipipe.extensions.parameters.library.scripts
Encapsulates ImageJ macro code to be detected by the parameter system
PythonScript() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.scripts.PythonScript
 
PythonScript(PythonScript) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.scripts.PythonScript
 
PythonScriptAlgorithm - Class in org.hkijena.jipipe.extensions.python.algorithms
An algorithm that allows to run Python code
PythonScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.python.algorithms.PythonScriptAlgorithm
Creates a new instance
PythonScriptAlgorithm(PythonScriptAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.python.algorithms.PythonScriptAlgorithm
Creates a copy
pythonSettingsAreValid() - Static method in class org.hkijena.jipipe.extensions.cellpose.CellposeSettings
Checks the Python settings
pythonSettingsAreValid() - Static method in class org.hkijena.jipipe.extensions.omnipose.OmniposeSettings
Checks the Python settings
pythonSettingsAreValid() - Static method in class org.hkijena.jipipe.extensions.python.adapter.PythonAdapterExtensionSettings
Checks the Python settings
pythonSettingsAreValid(JIPipeValidationReportContext) - Static method in class org.hkijena.jipipe.extensions.python.PythonExtensionSettings
Checks the Python settings
PythonUtils - Class in org.hkijena.jipipe.extensions.python
 
PythonUtils.RawPythonCode - Class in org.hkijena.jipipe.extensions.python
 

Q

Quantity - Class in org.hkijena.jipipe.extensions.parameters.library.quantities
A double with a unit
Quantity() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 
Quantity(double, String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 
Quantity(Quantity) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 
Quantity.LengthUnit - Enum in org.hkijena.jipipe.extensions.parameters.library.quantities
Enum of image dimension units
QuantityConvertFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.quantities
 
QuantityConvertFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.quantities.QuantityConvertFunction
 
QuantityGetUnitFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.quantities
 
QuantityGetUnitFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.quantities.QuantityGetUnitFunction
 
QuantityGetValueFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.quantities
 
QuantityGetValueFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.quantities.QuantityGetValueFunction
 
QuantityParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.quantities
 
QuantityParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.quantities.QuantityParameterEditorUI
Creates new instance
QuantityParameterSettings - Annotation Type in org.hkijena.jipipe.extensions.parameters.library.quantities
 
query(JIPipeGraphNode, UUID, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache
 
query(JIPipeGraphNode, UUID, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache
 
query(String, JIPipeNodeDatabaseRole, boolean, boolean) - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase
 
query(String, JIPipeNodeDatabaseRole, boolean, boolean, JIPipeSlotType, Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase
 
query(JIPipeDataSlot) - Method in class org.hkijena.jipipe.extensions.expressions.DataRowQueryExpression
Returns matching rows
query(JIPipeDataSlot, Collection<Integer>) - Method in class org.hkijena.jipipe.extensions.expressions.DataRowQueryExpression
Returns matching rows
query(Map<String, String>) - Method in class org.hkijena.jipipe.extensions.expressions.NamedStringQueryExpression.List
Filters only the named strings where the query applies.
queryAll(Collection<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.expressions.AnnotationQueryExpression
Returns all annotations that match the query
queryAll(Collection<JIPipeDataAnnotation>) - Method in class org.hkijena.jipipe.extensions.expressions.DataAnnotationQueryExpression
Returns all annotations that match the query
queryAll(Collection<Path>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.PathQueryExpression
Generates an annotation value
queryAll(Collection<String>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.StringQueryExpression
Generates an annotation value
queryFast(Path, JIPipeProgressInfo, String...) - Static method in class org.hkijena.jipipe.utils.ProcessUtils
Queries standard output with a timeout.
queryFirst(Collection<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.expressions.AnnotationQueryExpression
Generates an annotation value
queryFirst(Collection<JIPipeDataAnnotation>) - Method in class org.hkijena.jipipe.extensions.expressions.DataAnnotationQueryExpression
Generates an annotation value
queryFirst(Collection<Path>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.PathQueryExpression
Queries a string out of the list
queryFirst(Collection<String>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.StringQueryExpression
Queries a string out of the list
queryTextRanking(JIPipeNodeDatabaseEntry, String, List<String>) - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase
 
QuickRun - Class in org.hkijena.jipipe.ui.quickrun
Allows to test one algorithm with multiple parameters
QuickRun(JIPipeProject, JIPipeGraphNode, QuickRunSettings) - Constructor for class org.hkijena.jipipe.ui.quickrun.QuickRun
 
QuickRunSettings - Class in org.hkijena.jipipe.ui.quickrun
Settings for QuickRun
QuickRunSettings() - Constructor for class org.hkijena.jipipe.ui.quickrun.QuickRunSettings
Creates a new instance
QuickRunSetupUI - Class in org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties
UI for generating QuickRun
QuickRunSetupUI(JIPipeProjectWorkbench, JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties.QuickRunSetupUI
 

R

r - Variable in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines.HoughLine
 
RadiansToDegreeColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a abs(x) function
RadiansToDegreeColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.RadiansToDegreeColumnOperation
 
raiseSelection(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
RaiseUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
RaiseUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RaiseUIContextAction
 
RANDOM - Static variable in class org.hkijena.jipipe.extensions.expressions.functions.math.RandomFunction
 
RandomAccessibleImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.data.input
Handling of RandomAccessible, assumed to be ImgPlus It is assumed that these refer to images (conversion to ImageJ2DatasetData)
RandomAccessibleImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.data.input.RandomAccessibleImageJ2ModuleInput
 
RandomAccessibleImageJ2ModuleOutput - Class in org.hkijena.jipipe.extensions.imagej2.io.data.output
Handling of RandomAccessible, assumed to be ImgPlus It is assumed that these refer to images (conversion to ImageJ2DatasetData)
RandomAccessibleImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.data.output.RandomAccessibleImageJ2ModuleOutput
 
RandomFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.math
 
RandomFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.math.RandomFunction
 
rank(Object, String[]) - Method in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderUI.EntryRankingFunction
 
rank - Variable in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetEntryProvider.DatasetEntry
 
rank(UpdateSite, String[]) - Method in class org.hkijena.jipipe.ui.ijupdater.UpdateSiteListUI.Ranking
 
rank(T, String[]) - Method in interface org.hkijena.jipipe.utils.search.RankingFunction
Ranks the value in conjunction with the filter strings
RankedData<T> - Class in org.hkijena.jipipe.utils.search
 
RankedData(T, String, int[]) - Constructor for class org.hkijena.jipipe.utils.search.RankedData
 
Ranking() - Constructor for class org.hkijena.jipipe.ui.ijupdater.UpdateSiteListUI.Ranking
 
RankingFunction<T> - Interface in org.hkijena.jipipe.utils.search
Models a search ranking function
RArgumentsVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.r.REnvironment.RArgumentsVariablesInfo
 
RATIO_1_TO_1 - Static variable in class org.hkijena.jipipe.utils.AutoResizeSplitPane
 
RATIO_1_TO_3 - Static variable in class org.hkijena.jipipe.utils.AutoResizeSplitPane
 
RATIO_3_TO_1 - Static variable in class org.hkijena.jipipe.utils.AutoResizeSplitPane
 
RawImage2DExporterRun - Class in org.hkijena.jipipe.extensions.imageviewer.runs
 
RawImage2DExporterRun(ImagePlus, Path) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.runs.RawImage2DExporterRun
 
rawPythonCode(String) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
 
RawPythonCode(String) - Constructor for class org.hkijena.jipipe.extensions.python.PythonUtils.RawPythonCode
 
read(Path, boolean) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils
 
read() - Method in class org.hkijena.jipipe.utils.UnclosableInputStream
 
readBytes(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage
Reads a file as byte array
readCalibration(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
readDataset(File, String) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.Hdf5
Hdf5.readDataset(java.io.File, java.lang.String) with Ilastik ImgUtils DEFAULT_AXES and without callback.
readDataset(File, String, List<AxisType>) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.Hdf5
readDataset(File, String, List<AxisType>, LongConsumer) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.Hdf5
Read HDF5 dataset contents.
ReadException(String, HDF5Exception) - Constructor for exception org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetEntryProvider.ReadException
 
readFromFile(Path, Class<T>) - Static method in class org.hkijena.jipipe.utils.json.JsonUtils
 
readFromString(String, Class<T>) - Static method in class org.hkijena.jipipe.utils.json.JsonUtils
 
readFromString(String) - Static method in class org.hkijena.jipipe.utils.xml.XmlUtils
 
readImageFrom(Path, boolean, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ImagePlusFromFile
Loads an image from a file path
readJSON(Path, Class<?>) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage
Read data from a JSON file
ReadonlyCopyableTextField - Class in org.hkijena.jipipe.ui.components
 
ReadonlyCopyableTextField(String, boolean) - Constructor for class org.hkijena.jipipe.ui.components.ReadonlyCopyableTextField
 
readText(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage
Reads a text from a file
realLocationToGrid(Point, double) - Method in enum org.hkijena.jipipe.ui.grapheditor.JIPipeGraphViewMode
 
RealTypeParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.input
 
RealTypeParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.RealTypeParameterImageJ2ModuleInput
 
RealTypeParameterImageJ2ModuleOutput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.output
 
RealTypeParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.RealTypeParameterImageJ2ModuleOutput
 
REasyInstaller - Class in org.hkijena.jipipe.extensions.r.installers
 
REasyInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.r.installers.REasyInstaller
 
rebuildAliasIds(boolean) - Method in class org.hkijena.jipipe.api.JIPipeProject
Re-assigns graph node Ids based on their name
rebuildAliasIds(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Recreates the alias Ids based on their name
RebuildAliasIdsTool - Class in org.hkijena.jipipe.extensions.tools
 
RebuildAliasIdsTool(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.tools.RebuildAliasIdsTool
Creates a new instance
rebuildCompartmentsFromGraph() - Method in class org.hkijena.jipipe.api.JIPipeProject
Rebuilds the compartment list from the current state of the compartment graph
rebuildImageLater() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
rebuildImmediately() - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase
 
rebuildLater() - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseUpdater
 
rebuildLayout() - Method in class org.hkijena.jipipe.ui.components.FlexContentPanel
 
rebuildModel() - Method in class org.hkijena.jipipe.ui.components.ParameterTreeUI
Recreates the tree model
rebuildPlot() - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
Attempts to rebuild the current plot
RebuildReportRun(JIPipeProject, JIPipeProjectReportUI.ReportSettings) - Constructor for class org.hkijena.jipipe.ui.JIPipeProjectReportUI.RebuildReportRun
 
rebuildRibbon() - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon
 
recalculateEdgeFeatureRange() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
 
recalculateMaskPreview() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
recalculateSpotFeatureRange() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotsCollectionData
 
recalculateTrackFeatureRanges() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
 
RecentJsonExtensionsMenu - Class in org.hkijena.jipipe.ui.components
Menu that displays recently opened JIPipeJsonPlugin
RecentJsonExtensionsMenu(String, Icon, JIPipeJsonExtensionWindow) - Constructor for class org.hkijena.jipipe.ui.components.RecentJsonExtensionsMenu
 
RecentProjectListCellRenderer - Class in org.hkijena.jipipe.ui.components
Renders a recent project
RecentProjectListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.components.RecentProjectListCellRenderer
 
RecentProjectsListPanel - Class in org.hkijena.jipipe.ui.documentation
 
RecentProjectsListPanel(JIPipeProjectWorkbench) - Constructor for class org.hkijena.jipipe.ui.documentation.RecentProjectsListPanel
 
RecentProjectsListPanel.ProjectOpenedEvent - Class in org.hkijena.jipipe.ui.documentation
 
RecentProjectsListPanel.ProjectOpenedEventEmitter - Class in org.hkijena.jipipe.ui.documentation
 
RecentProjectsListPanel.ProjectOpenedEventListener - Interface in org.hkijena.jipipe.ui.documentation
 
RecentProjectsMenu - Class in org.hkijena.jipipe.ui.components
Menu that displays recently opened JIPipeProject
RecentProjectsMenu(String, Icon, JIPipeProjectWindow) - Constructor for class org.hkijena.jipipe.ui.components.RecentProjectsMenu
 
recheckValidity() - Method in class org.hkijena.jipipe.ui.components.ReloadableValidityChecker
Revalidates the object
RectangleDeserializer - Class in org.hkijena.jipipe.extensions.parameters.library.roi
Deserializer for Color
RectangleDeserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.RectangleDeserializer
 
RectangleImageJ2ShapeData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.shapes
 
RectangleImageJ2ShapeData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.RectangleImageJ2ShapeData
 
RectangleImageJ2ShapeData(RectangleShape) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.RectangleImageJ2ShapeData
 
RectangleImageJ2ShapeData(RectangleImageJ2ShapeData) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.RectangleImageJ2ShapeData
 
RectangleList - Class in org.hkijena.jipipe.extensions.parameters.library.roi
List parameter of Rectangle
RectangleList() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.RectangleList
Creates a new instance
RectangleList(RectangleList) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.RectangleList
Creates a copy
RectangleMaskDrawer2DTool - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer
Rectangle drawing Allows left-click canvas dragging
RectangleMaskDrawer2DTool(MaskDrawerPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.RectangleMaskDrawer2DTool
 
RectangleParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.roi
Editor for a any numeric parameter
RectangleParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.RectangleParameterEditorUI
 
RectangleSerializer - Class in org.hkijena.jipipe.extensions.parameters.library.roi
Serializer for Rectangle
RectangleSerializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.roi.RectangleSerializer
 
RectangularLine - Class in org.hkijena.jipipe.ui.grapheditor.general.connections
Contains coordinates of a line that is rectangular This abstracts away x and y for horizontal and vertical implementations
RectangularLine(int, int, int, int) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.connections.RectangularLine
 
red - Variable in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
redirectDragEvents(Component, Component) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
redo(UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Redo the last undo operation
redrawPlot() - Method in class org.hkijena.jipipe.ui.components.PlotReader
Redraws the plot
REFERENCE_INPUT_SLOT - Static variable in class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.SkeletonToSimplifiedFilamentsFijiAlgorithm
 
REFERENCE_INPUT_SLOT - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm
 
ReferencedAppendRectangularRoiAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate
Deprecated.
ReferencedAppendRectangularRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.ReferencedAppendRectangularRoiAlgorithm
Deprecated.
Instantiates a new node type.
ReferencedAppendRectangularRoiAlgorithm(ReferencedAppendRectangularRoiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.ReferencedAppendRectangularRoiAlgorithm
Deprecated.
Instantiates a new node type.
ReferencedDefineRectangularRoiAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate
Deprecated.
ReferencedDefineRectangularRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.ReferencedDefineRectangularRoiAlgorithm
Deprecated.
Instantiates a new node type.
ReferencedDefineRectangularRoiAlgorithm(ReferencedDefineRectangularRoiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.ReferencedDefineRectangularRoiAlgorithm
Deprecated.
Instantiates a new node type.
reflectionAccess(JIPipeParameterCollection, Method, Method) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
Sets up access via reflection The field class is extracted from the getter return type
ReflectionUtils - Class in org.hkijena.jipipe.utils
Utilities around reflection
refreshContent(boolean, Object) - Method in class org.hkijena.jipipe.ui.parameterreference.GraphNodeParameterReferenceGroupCollectionEditorUI
 
refreshDataInfoList() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker
Refreshes the list
refreshForm() - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
Recreates the UI elements.
refreshFormPanel() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
refreshFormPanel() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
refreshImageInfo() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
refreshList() - Method in class org.hkijena.jipipe.ui.ijupdater.UpdateSiteListUI
 
refreshNodeInfoList() - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker
Refreshes the list
RefreshRepositoryRun - Class in org.hkijena.jipipe.ui.ijupdater
A run that is used for the updater
RefreshRepositoryRun() - Constructor for class org.hkijena.jipipe.ui.ijupdater.RefreshRepositoryRun
 
refreshSlice() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
refreshTable() - Method in class org.hkijena.jipipe.ui.cache.JIPipeAlgorithmCacheBrowserUI
 
refreshTable() - Method in class org.hkijena.jipipe.ui.ijupdater.ManagerUI
 
refreshTable() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotPreview
Rebuilds the table to show the updated preview
refreshTree() - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchTree
Rebuilds the tree
refreshTree() - Method in class org.hkijena.jipipe.ui.cache.cachetree.JIPipeCacheTreePanel
Rebuilds the tree
refreshUpdater() - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeImageJPluginManager
 
RegexStringPredicateFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
RegexStringPredicateFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.RegexStringPredicateFunction
 
RegionalMaxima2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local
 
RegionalMaxima2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMaxima2DAlgorithm
Instantiates a new node type.
RegionalMaxima2DAlgorithm(RegionalMaxima2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMaxima2DAlgorithm
Instantiates a new node type.
RegionalMaxima3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local
 
RegionalMaxima3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMaxima3DAlgorithm
Instantiates a new node type.
RegionalMaxima3DAlgorithm(RegionalMaxima3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMaxima3DAlgorithm
Instantiates a new node type.
RegionalMinima2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local
 
RegionalMinima2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMinima2DAlgorithm
Instantiates a new node type.
RegionalMinima2DAlgorithm(RegionalMinima2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMinima2DAlgorithm
Instantiates a new node type.
RegionalMinima3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local
 
RegionalMinima3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMinima3DAlgorithm
Instantiates a new node type.
RegionalMinima3DAlgorithm(RegionalMinima3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMinima3DAlgorithm
Instantiates a new node type.
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compartments.JIPipeCompartmentsPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.grouping.GroupingPlugin
 
register() - Method in class org.hkijena.jipipe.api.grouping.JsonNodeRegistrationTask
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.looping.LoopingPlugin
 
register(String, Class<? extends JIPipeData>, JIPipeDependency) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Registers a data type
register(Class<? extends JIPipeGraphEditorTool>) - Method in class org.hkijena.jipipe.api.registries.JIPipeGraphEditorToolRegistry
 
register(String, ImageJDataImporter, Class<? extends ImageJDataImporterUI>) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry
Registers an importer
register(String, ImageJDataExporter, Class<? extends ImageJDataExporterUI>) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry
Registers an importer
register() - Method in class org.hkijena.jipipe.api.registries.JIPipeJavaNodeRegistrationTask
 
register() - Method in interface org.hkijena.jipipe.api.registries.JIPipeNodeRegistrationTask
Runs the registration
register(JIPipeNodeInfo, JIPipeDependency) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Registers an algorithm info
register(JIPipeParameterTypeInfo) - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry
Registers a new parameter type
register(JIPipeProjectTemplate) - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry
 
register(Path) - Method in class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry
 
register(String, String, Icon, String, Icon, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry
Registers a new settings sheet
register(String, String, String, Icon, String, Icon, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry
Registers a new settings sheet
register(Class<?>, Class<?>) - Method in class org.hkijena.jipipe.api.registries.JIPipeUtilityRegistry
Registers a new utility associated to the category
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.AnnotationsPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.batchassistant.BatchAssistantPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.cellpose.CellposePlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.clij2.CLIJPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.core.CorePlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.dev.DevelopmentPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.FilesystemPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.forms.FormsPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.graphannotation.GraphAnnotationPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.IJ3DPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.TrackMatePlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijweka.WekaPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ilastik.IlastikPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2Plugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.ImageJAlgorithmsPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imp.ImpPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionLoaderPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.multiparameters.MultiParameterAlgorithmsPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.multiparameters.MultiParametersPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.nodetemplate.NodeTemplateBoxToolPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.OMEROPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omnipose.OmniposePlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.parameters.StandardParametersPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.pipelinerender.PipelineRenderPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.plots.PlotsPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.processes.ProcessesPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.python.PythonPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.r.RPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.scene3d.Scene3DPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.settings.StandardSettingsPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.StringsPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.TablesPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tools.ToolsPlugin
 
register(JIPipe, Context, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.UtilitiesPlugin
 
register(JIPipeJsonPlugin, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.JIPipe
Registers a JSON extension
register(JIPipe, Context, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.JIPipeJavaPlugin
Registers custom modules into JIPipe
register() - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
Registers the content.
registerAnnotationNodeType(String, Class<T>, Class<? extends JIPipeAnnotationGraphNodeTool<T>>, URL) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a new annotation node type and associated JIPipeGraphEditorTool
registerCategory(JIPipeNodeTypeCategory) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Registers a category
registerColumnOperation(String, ColumnOperation, String, String, String) - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry
Registers a new operation.
registerContextMenuAction(NodeUIContextAction) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a custom context menu action
registerContextMenuAction(NodeUIContextAction) - Method in class org.hkijena.jipipe.ui.registries.JIPipeCustomMenuRegistry
Registers a new context menu action.
registerConversion(JIPipeDataConverter) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Registers a data converter that allows implicit conversion between data types
registerDatatype(String, Class<? extends JIPipeData>, URL, Class<? extends JIPipeResultDataSlotRowUI>, Class<? extends JIPipeResultDataSlotPreview>, JIPipeDataOperation...) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a new data type
registerDatatype(String, Class<? extends JIPipeData>, URL, JIPipeDataOperation...) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a new data type
registerDatatypeConversion(JIPipeDataConverter) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a non-trivial conversion between data types.
registerDatatypeDisplayOperation(String, JIPipeDataDisplayOperation) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers an additional non-default display operation for the data type.
registerDatatypeImportOperation(String, JIPipeDataImportOperation) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers an import operation for the data type.
registerDatatypeOperation(String, JIPipeDataOperation...) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Shortcut for registering import and display operations.
registerDefaultPlugin(Class<? extends JIPipeImageViewerPlugin>) - Static method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
registerDisplayOperation(String, JIPipeDataDisplayOperation) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Registers an operation that will be available to users in the cache view
registerEdgeFeatures(JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackMateUtils
 
registerEnumParameterType(String, Class<? extends Enum<?>>, String, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers an Enum as parameter
registerEnvironment(Class<? extends JIPipeEnvironment>, ExternalEnvironmentSettings) - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry
Registers an environment and its corresponding settings
registerEnvironment(Class<T>, Class<U>, ExternalEnvironmentSettings, String, String, String, Icon) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a new environment type.
registerEnvironmentInstaller(Class<? extends JIPipeEnvironment>, Class<? extends ExternalEnvironmentInstaller>, Icon) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers an installer for a given environment
registerExample(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Registers a node template as example Will reject if the template does not contain exactly one node
registerExpressionFunction(ExpressionFunction, String, String) - Method in class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry
Registers an new function that will be usable within expressions.
registerExpressionFunction(ExpressionFunction, String, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a function that can be used within expressions.
registerExpressionFunction(ExpressionFunction) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a function that can be used within expressions.
registerGenerator(Class<?>, JIPipeParameterGenerator) - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry
Registers a UI that can generate parameters
registerGraphEditorTool(Class<? extends JIPipeGraphEditorTool>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
 
registerGraphEditorToolBarButton(Class<? extends GraphEditorToolBarButtonExtension>) - Method in class org.hkijena.jipipe.ui.registries.JIPipeCustomMenuRegistry
Registers a new button for the graph editor.
registerGraphEditorToolBarButtonExtension(Class<? extends GraphEditorToolBarButtonExtension>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a custom button for the graph editor toolbar
registerHyperlinkHandler(JTextPane) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
registerIcon(Class<? extends JIPipeData>, URL) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Registers a custom icon for a datatype
registerIcon(JIPipeNodeInfo, URL) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Registers a custom icon for a node
registerImageJDataExporter(String, ImageJDataExporter, Class<? extends ImageJDataExporterUI>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers an importer for data from ImageJ
registerImageJDataImporter(String, ImageJDataImporter, Class<? extends ImageJDataImporterUI>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers an importer for data from ImageJ
registerImportOperation(String, JIPipeDataImportOperation) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Registers an operation that will be available to users in the results view (after runs).
registerInstaller(Class<? extends JIPipeEnvironment>, Class<? extends ExternalEnvironmentInstaller>, Icon) - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry
Registers an installer
registerJsonExtensionFromFile(Path) - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionLoaderPlugin
Schedules a registration task for the file path
registerJsonExtensionFromResource(String) - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionLoaderPlugin
Schedules a registration task for a resource path
registerKnownExtension(JIPipePlugin) - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
Registers an extension as known to the extension registry.
registerMenu(Class<? extends JIPipeMenuExtension>) - Method in class org.hkijena.jipipe.ui.registries.JIPipeCustomMenuRegistry
Registers a new extension
registerMenuExtension(Class<? extends JIPipeMenuExtension>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a custom menu entry.
registerNodeExample(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a node template as example for a node.
registerNodeExample(Class<T>, String, Consumer<T>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a node as node example based on a node instance The configurator function is run prior to the registration Must be run within postprocess()
registerNodeExample(JIPipeGraphNode) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a node example based on the node instance The name of the example is taken from the node custom name Must be run within postprocess()
registerNodeExamplesFromResources(JIPipeResourceManager, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers node examples from plugin resources via a JIPipeResourceManager.
registerNodeExamplesFromResources(Class<?>, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers node examples from plugin resources.
registerNodeTemplate(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a node template
registerNodeTemplatesFromResources(JIPipeResourceManager, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers node templates from plugin resources via a JIPipeResourceManager.
registerNodeTemplatesFromResources(Class<?>, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers node examples from plugin resources.
registerNodeType(String, Class<? extends JIPipeGraphNode>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a new node type.
registerNodeType(String, Class<? extends JIPipeGraphNode>, URL) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a new node type.
registerNodeType(JIPipeNodeInfo) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a new node type.
registerNodeType(JIPipeNodeInfo, URL) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a new node type.
registerNodeType(JIPipeNodeRegistrationTask) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a new node type with additional dependencies.
registerNodeTypeCategory(JIPipeNodeTypeCategory) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a node type category
registerParameterEditor(Class<?>, Class<? extends JIPipeParameterEditorUI>) - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry
Registers a new parameter type
registerParameterEditor(Class<?>, Class<? extends JIPipeParameterEditorUI>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers an editor for any parameter type that inherits from the provided parameter class.
registerParameterGenerator(Class<?>, JIPipeParameterGenerator) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a UI that can generate parameters
registerParameterType(String, Class<?>, Supplier<Object>, Function<Object, Object>, String, String, Class<? extends JIPipeParameterEditorUI>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a new parameter type and respective editors
registerParameterType(String, Class<?>, String, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a new parameter type that already has an existing editor.
registerParameterType(String, Class<?>, String, String, Class<? extends JIPipeParameterEditorUI>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a new parameter type.
registerParameterType(String, Class<T>, Class<? extends ListParameter<T>>, Supplier<Object>, Function<Object, Object>, String, String, Class<? extends JIPipeParameterEditorUI>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a new parameter type and respective editors
registerParameterType(JIPipeParameterTypeInfo, Class<? extends JIPipeParameterEditorUI>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a new parameter type and respective editor
registerParameterType(JIPipeParameterTypeInfo, Class<?>, Class<? extends JIPipeParameterEditorUI>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a new parameter type and respective editor
registerProjectTemplatesFromResources(JIPipeResourceManager, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers project templates from plugin resources via a JIPipeResourceManager.
registerProjectTemplatesFromResources(Class<?>, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers project templates from plugin resources Will detect *.jip files and attempt to load them (fails silently)
registerResultSlotUI(Class<? extends JIPipeData>, Class<? extends JIPipeResultDataSlotRowUI>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Registers a custom UI for a result data slot
registerResultTableCellUI(Class<? extends JIPipeData>, Class<? extends JIPipeResultDataSlotPreview>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Registers a custom renderer for the data displayed in the dataslot result table
RegisterRoiToImageByBrightnessAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.register
 
RegisterRoiToImageByBrightnessAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.register.RegisterRoiToImageByBrightnessAlgorithm
 
RegisterRoiToImageByBrightnessAlgorithm(RegisterRoiToImageByBrightnessAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.register.RegisterRoiToImageByBrightnessAlgorithm
 
registerSettingsSheet(String, String, Icon, String, Icon, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a new settings sheet
registerSettingsSheet(String, String, String, Icon, String, Icon, JIPipeParameterCollection) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a new settings sheet
registerSingletonTab(String, String, Icon, Supplier<Component>, DocumentTabPane.SingletonTabMode) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Adds a tab that can be silently closed and brought up again
registerSingletonTab(String, String, Icon, Supplier<Component>, DocumentTabPane.CloseMode, DocumentTabPane.SingletonTabMode) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Adds a tab that can be silently closed and brought up again
registerSpotDetectors(TrackMatePlugin, JIPipeProgressInfo, PluginService) - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackMateUtils
 
registerSpotFeatures(JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackMateUtils
 
registerSpotTrackers(TrackMatePlugin, JIPipeProgressInfo, PluginService) - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackMateUtils
 
registerSubParameter(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection
Registers a sub-parameter instance to pass ParameterStructureChangedEvent via this algorithm's events
registerSubParameters(JIPipeParameterCollection...) - Method in class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection
Registers a sub-parameter instance to pass ParameterStructureChangedEvent via this algorithm's events
registerTableColumnOperation(String, ColumnOperation, String, String, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a table column operation.
registerTableColumnOperationAndExpressionFunction(String, ColumnOperation, String, String, String) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers a table column operation.
registerTemplate(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Registers a node template as example Will reject
registerTrackFeatures(JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackMateUtils
 
registerUtility(Class<?>, Class<?>) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
Registers an arbitrary utility associated to a category class.
RelabeledTableColumn - Class in org.hkijena.jipipe.extensions.tables.datatypes
 
RelabeledTableColumn(TableColumn, String) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.RelabeledTableColumn
 
relativeJIPipeUserDirToAbsolute(Path) - Static method in class org.hkijena.jipipe.utils.PathUtils
Converts relative paths to absolute paths, relative to the ImageJ directory Absolute paths are left unchanged
relativeToAbsolute(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeDataStorage
Converts a path relative to this storage into a path that is relative to the root storage.
relativeToAbsoluteResourcePath(String) - Method in class org.hkijena.jipipe.utils.JIPipeResourceManager
Converts a relative resource path to an absolute resource path
RelativizeByParameter - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Applies subfolder navigation to each input folder
RelativizeByParameter(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.RelativizeByParameter
 
RelativizeByParameter(RelativizeByParameter) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.RelativizeByParameter
Copies the algorithm
RelativizePaths - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Applies subfolder navigation to each input folder
RelativizePaths(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.RelativizePaths
 
RelativizePaths(RelativizePaths) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.RelativizePaths
Copies the algorithm
reload() - Method in class org.hkijena.jipipe.api.environments.ExternalEnvironmentParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollectionParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContentsParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry
Reloads the settings from the default file if it exists
reload() - Method in class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.expressions.ui.JIPipeExpressionParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.WekaClassifierParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.imagej2.io.DefaultImageJ2JIPipeModuleIOService
 
reload() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OMEAccessorParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.nodetemplate.JIPipeNodeTemplateParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicEnumParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2DParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.auth.PasswordParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionListEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.colors.ColorParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.editors.JIPipeParameterCollectionVisibilitiesParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.filesystem.FileParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.filesystem.FilePathParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.images.ImageParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.JIPipeAuthorMetadataParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.JIPipeParameterCollectionParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.markup.HTMLTextParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtractionParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.BooleanParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.NumberParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRangeParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.StringOrDoubleParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.StringParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.quantities.QuantityParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.IconRefParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExporterRefParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRefParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImporterRefParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRefParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRefParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeNodeInfoRefParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeParameterTypeInfoRefParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.AnchorParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMarginEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.InnerMarginEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.MarginParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.RectangleParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.scripts.LargeScriptParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.plots.parameters.UIPlotDataSeriesColumnEnumParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnGeneratorParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.extensions.tables.parameters.ResultsTableDataParameterEditorUI
 
reload() - Method in class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
Reloads the value from the stored parameter
ReloadableValidityChecker - Class in org.hkijena.jipipe.ui.components
Panel that encapsulates a JIPipeValidityReportUI and an JIPipeValidatable.
ReloadableValidityChecker(JIPipeWorkbench, JIPipeValidatable) - Constructor for class org.hkijena.jipipe.ui.components.ReloadableValidityChecker
 
ReloadableValidityChecker(JIPipeWorkbench, JIPipeValidatable, MarkdownDocument) - Constructor for class org.hkijena.jipipe.ui.components.ReloadableValidityChecker
 
reloadDisplayedData() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
 
reloadEntries() - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesListEditorUI
Reloads entries in this panel
reloadForm() - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
Reloads the form.
reloadList() - Method in class org.hkijena.jipipe.ui.documentation.JIPipeCompendiumUI
 
reloadList() - Method in class org.hkijena.jipipe.ui.grapheditor.general.properties.JIPipeSlotEditorUI
Reloads the list
reloadList() - Method in class org.hkijena.jipipe.ui.history.HistoryJournalUI
 
reloadList() - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotAvailableDataManagerUI
Reloads the list of data sources
ReloadListRun(NodeToolBox) - Constructor for class org.hkijena.jipipe.extensions.nodetoolboxtool.NodeToolBox.ReloadListRun
 
ReloadListRun(JIPipeNodeFinderDialogUI) - Constructor for class org.hkijena.jipipe.ui.grapheditor.nodefinder.JIPipeNodeFinderDialogUI.ReloadListRun
 
reloadMenuBar() - Method in class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExtensionGraphUI
Reloads the menu bar
reloadMenuBar() - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.JIPipePipelineGraphEditorUI
 
reloadMenuBar() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.JIPipeCompartmentsGraphEditorUI
 
reloadMenuBar() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
Reloads the menu bar
RemapLabelsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
RemapLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.RemapLabelsAlgorithm
 
RemapLabelsAlgorithm(RemapLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.RemapLabelsAlgorithm
 
remove(Object) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
remove(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
remove(int) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration
 
remove(Object) - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
remove(int) - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
removeActionListener(ActionListener) - Method in class org.hkijena.jipipe.ui.components.PathEditor
 
removeAdaptiveParameter(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
removeAlgorithm(JsonNodeInfo) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
Removes an algorithm
removeAll(Collection<?>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
removeAll(Collection<?>) - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
removeAllAnnotationsFromData(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Removes an annotation column from the data
removeAllWithDispose(JComponent) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
RemoveAnnotationAlgorithm - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Removes a specified annotation
RemoveAnnotationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveAnnotationAlgorithm
 
RemoveAnnotationAlgorithm(RemoveAnnotationAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveAnnotationAlgorithm
Copies the algorithm
RemoveArrayAnnotationsAlgorithm - Class in org.hkijena.jipipe.extensions.annotation.algorithms
 
RemoveArrayAnnotationsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveArrayAnnotationsAlgorithm
 
RemoveArrayAnnotationsAlgorithm(RemoveArrayAnnotationsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveArrayAnnotationsAlgorithm
 
removeAttachment(Class<?>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Removes an attachment Warning: Attachments are not serialized
RemoveBookmarkNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
RemoveBookmarkNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RemoveBookmarkNodeUIContextAction
 
RemoveBorderFilaments - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.filter
 
RemoveBorderFilaments(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.RemoveBorderFilaments
 
RemoveBorderFilaments(RemoveBorderFilaments) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.RemoveBorderFilaments
 
RemoveBorderLabelsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter
 
RemoveBorderLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.RemoveBorderLabelsAlgorithm
 
RemoveBorderLabelsAlgorithm(RemoveBorderLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.RemoveBorderLabelsAlgorithm
 
RemoveBorderRoi3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process
 
RemoveBorderRoi3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm
 
RemoveBorderRoi3DAlgorithm(RemoveBorderRoi3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm
 
RemoveBorderRoisAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter
Wrapper around RoiManager
RemoveBorderRoisAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.RemoveBorderRoisAlgorithm
Instantiates a new node type.
RemoveBorderRoisAlgorithm(RemoveBorderRoisAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.RemoveBorderRoisAlgorithm
Instantiates a new node type.
removeColumn(int) - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
Removes a column
removeColumn(int) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
Removes the specified column
removeColumn(String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Removes a column with given name
RemoveColumnAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.columns
Algorithm that removes columns
RemoveColumnAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.RemoveColumnAlgorithm
Creates a new instance
RemoveColumnAlgorithm(RemoveColumnAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.RemoveColumnAlgorithm
Creates a copy
removeColumnAt(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Removes the column with the specified index
removeColumns(Collection<String>) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Removes the columns with given headings
removeCompartment(JIPipeProjectCompartment) - Method in class org.hkijena.jipipe.api.JIPipeProject
Removes a compartment
removeCompartment(UUID) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Removes a whole compartment from the graph.
removeComponentsAtBorder(ImagePlus, boolean, boolean, boolean, boolean, double) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
removeContent(GraphNodeParameterReference) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup
Adds a new element into the group
removeData(List<TableColumn>) - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
Removes the data
RemoveDataAnnotations - Class in org.hkijena.jipipe.extensions.annotation.algorithms
 
RemoveDataAnnotations(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveDataAnnotations
 
RemoveDataAnnotations(RemoveDataAnnotations) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveDataAnnotations
 
removeDuplicateDelimiters(String, String) - Static method in class org.hkijena.jipipe.utils.StringUtils
 
RemoveDuplicatesFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
RemoveDuplicatesFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.RemoveDuplicatesFunction
 
removeDuplicateVertices(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
RemoveDuplicateVerticesAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.process
 
RemoveDuplicateVerticesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.RemoveDuplicateVerticesAlgorithm
 
RemoveDuplicateVerticesAlgorithm(RemoveDuplicateVerticesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.RemoveDuplicateVerticesAlgorithm
 
removeFromSelection(JIPipeGraphNodeUI) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Removes an algorithm from the selection
removeFromSelection(JIPipeGraphNodeUI) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
Removes an algorithm from the selection
removeGroup(GraphNodeParameterReferenceGroup) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection
Removes the group
removeHighlightedComponents(Set<Component>) - Method in class org.hkijena.jipipe.ui.components.FormPanel.FormPanelContentPanel
 
removeHTMLRoot(String) - Static method in class org.hkijena.jipipe.utils.StringUtils
Removes the HTML root from HTML
RemoveImageMetadataAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata
 
RemoveImageMetadataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.RemoveImageMetadataAlgorithm
 
RemoveImageMetadataAlgorithm(RemoveImageMetadataAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.RemoveImageMetadataAlgorithm
 
removeInputSlot(String, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Removes the slot with given name
removeInputSlot(String, boolean) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
removeInputSlot(String, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeIOSlotConfiguration
 
removeInputToNodeEdge(JIPipeAlgorithm, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph
 
removeLabelsExcept(ImageProcessor, int[]) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.ImageJAlgorithmUtils
 
RemoveLargestLabelAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter
 
RemoveLargestLabelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.RemoveLargestLabelAlgorithm
 
RemoveLargestLabelAlgorithm(RemoveLargestLabelAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.RemoveLargestLabelAlgorithm
 
RemoveLargestRegionAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary
 
RemoveLargestRegionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.RemoveLargestRegionAlgorithm
Instantiates a new node type.
RemoveLargestRegionAlgorithm(RemoveLargestRegionAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.RemoveLargestRegionAlgorithm
Instantiates a new node type.
removeLastRow() - Method in class org.hkijena.jipipe.ui.components.FormPanel
Removes the last row.
removeLUT(ImagePlus, Set<Integer>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
RemoveLUTAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut
 
RemoveLUTAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.RemoveLUTAlgorithm
 
RemoveLUTAlgorithm(RemoveLUTAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.RemoveLUTAlgorithm
 
removeMergedDataAnnotation(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Removes a data annotation
removeMergedTextAnnotation(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Removes an annotation of provided type
removeMergedTextAnnotation(String) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Removes an annotation of provided type
removeMessage(MessagePanel.Message) - Method in class org.hkijena.jipipe.ui.components.MessagePanel
 
RemoveNAAnnotationColumnsAlgorithm - Class in org.hkijena.jipipe.extensions.annotation.algorithms
 
RemoveNAAnnotationColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveNAAnnotationColumnsAlgorithm
 
RemoveNAAnnotationColumnsAlgorithm(RemoveNAAnnotationColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveNAAnnotationColumnsAlgorithm
 
RemoveNaNColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Sets NaN values to zero
RemoveNaNColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.RemoveNaNColumnOperation
 
RemoveNaNFilter2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
Wrapper around RankFilters
RemoveNaNFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.RemoveNaNFilter2DAlgorithm
Instantiates a new node type.
RemoveNaNFilter2DAlgorithm(RemoveNaNFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.RemoveNaNFilter2DAlgorithm
Instantiates a new node type.
removeNode(JIPipeGraphNode, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Removes an algorithm.
removeNodes(Set<JIPipeGraphNode>, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Removes multiple nodes at once
removeNodeToOutputEdge(JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph
 
RemoveOutliersFilter2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise
Wrapper around RankFilters
RemoveOutliersFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm
Instantiates a new node type.
RemoveOutliersFilter2DAlgorithm(RemoveOutliersFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm
Instantiates a new node type.
RemoveOutliersFilter2DAlgorithm.Mode - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise
The two different modes of this filter
removeOutputSlot(String, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Removes the slot with given name
removeOutputSlot(String, boolean) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
removeOutputSlot(String, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeIOSlotConfiguration
 
removeOutputToInputEdge(JIPipeDataSlot, JIPipeInputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph
Removes a connection from the targeted output slot to the input, which will free up the output slot at some point
removeOverlay(JIPipeData) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
removeOverlay(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
RemoveOverlay3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.overlay
 
RemoveOverlay3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.overlay.RemoveOverlay3DAlgorithm
 
RemoveOverlay3DAlgorithm(RemoveOverlay3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.overlay.RemoveOverlay3DAlgorithm
 
RemoveOverlayAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay
 
RemoveOverlayAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RemoveOverlayAlgorithm
 
RemoveOverlayAlgorithm(RemoveOverlayAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RemoveOverlayAlgorithm
 
removeOverlaysOfType(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
removeParameter(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Removes a parameter
removeParameterByKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Removes a parameter by key
RemoveROI3DMetadataAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata
 
RemoveROI3DMetadataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.RemoveROI3DMetadataAlgorithm
 
RemoveROI3DMetadataAlgorithm(RemoveROI3DMetadataAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.RemoveROI3DMetadataAlgorithm
 
RemoveROIMetadataAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties
 
RemoveROIMetadataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.RemoveROIMetadataAlgorithm
 
RemoveROIMetadataAlgorithm(RemoveROIMetadataAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.RemoveROIMetadataAlgorithm
 
removeRow(int) - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
Removes a row
removeRow(int) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
Removes the row with the specified index
removeRow(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
removeRows(Collection<Integer>) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
removeSelectedFilaments() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
removeSelectedROIs() - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
removeSelectedROIs(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
removeSelectedSpots(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D
 
removeSelectedSpots(boolean) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D
 
removeSelectedTracks(boolean) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D
 
removeSelectionContextPanel(ROIManagerPlugin3DSelectionContextPanel) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
removeSelectionContextPanel(FilamentsManagerPlugin2D.SelectionContextPanel) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D
 
removeSelectionContextPanel(FilamentsManagerPlugin3D.SelectionContextPanel) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
removeSelectionContextPanel(SpotsManagerPlugin2D.SelectionContextPanel) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D
 
removeSelectionContextPanel(TracksManagerPlugin2D.SelectionContextPanel) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D
 
removeSelectionContextPanel(ROIManagerPlugin2DSelectionContextPanel) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
removeSelfEdges() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
removeSeries(PlotDataSeries) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
Removes a series
removeSeries(JIPipePlotSeriesBuilder) - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
Removes a series from the series builder
removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableMetadata
 
removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
 
removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
 
removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantTableModel
 
removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableModel
 
removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableModel
 
removeTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerTableModel
 
removeUpdate(DocumentEvent) - Method in class org.hkijena.jipipe.ui.components.DocumentChangeListener
 
removeUpdateSite(UpdateSite) - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeImageJPluginManager
 
removeUser(Object) - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore
Un-marks the provided objects as user of this data
removeVertexIf(Predicate<FilamentVertex>) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
RenameAnnotation - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Generates annotations from filenames
RenameAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.RenameAnnotation
New instance
RenameAnnotation(RenameAnnotation) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.RenameAnnotation
Copies the algorithm
RenameByString - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Applies subfolder navigation to each input folder
RenameByString(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.RenameByString
 
RenameByString(RenameByString) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.RenameByString
Copies the algorithm
renameColumn(String, String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Renames a column
renameCompartments(Map<String, String>) - Method in class org.hkijena.jipipe.ui.grapheditor.NodeHotKeyStorage
Renames the internal compartment mappings
RenameDataAnnotation - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Generates annotations from filenames
RenameDataAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.RenameDataAnnotation
New instance
RenameDataAnnotation(RenameDataAnnotation) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.RenameDataAnnotation
Copies the algorithm
renamedCopy(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
renameNodeIds(Map<String, String>) - Method in class org.hkijena.jipipe.ui.grapheditor.NodeHotKeyStorage
Renames a node to another Id
RenameSingleColumnsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.columns
Algorithm that removes columns
RenameSingleColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameSingleColumnsAlgorithm
Creates a new instance
RenameSingleColumnsAlgorithm(RenameSingleColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameSingleColumnsAlgorithm
Creates a copy
RenameTableColumns2Algorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.columns
Algorithm that removes columns
RenameTableColumns2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumns2Algorithm
Creates a new instance
RenameTableColumns2Algorithm(RenameTableColumns2Algorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumns2Algorithm
Creates a copy
RenameTableColumns2Algorithm.RenamingEntry - Class in org.hkijena.jipipe.extensions.tables.nodes.columns
 
RenameTableColumnsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.columns
Deprecated.
RenameTableColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumnsAlgorithm
Deprecated.
Creates a new instance
RenameTableColumnsAlgorithm(RenameTableColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumnsAlgorithm
Deprecated.
Creates a copy
RenameTableColumnsToAnnotationAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.columns
Algorithm that removes columns
RenameTableColumnsToAnnotationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm
Creates a new instance
RenameTableColumnsToAnnotationAlgorithm(RenameTableColumnsToAnnotationAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm
Creates a copy
RenamingEntry() - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumns2Algorithm.RenamingEntry
 
RenamingEntry(RenameTableColumns2Algorithm.RenamingEntry) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumns2Algorithm.RenamingEntry
 
render() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo.StatusUpdatedEvent
 
Renderer(DynamicEnumParameter<Object>) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicEnumParameterEditorUI.Renderer
 
Renderer(EnumItemInfo) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterEditorUI.Renderer
 
Renderer() - Constructor for class org.hkijena.jipipe.ui.cache.JIPipeCachedDataViewerAnnotationInfoPanel.Renderer
Creates a new renderer
Renderer() - Constructor for class org.hkijena.jipipe.ui.components.ParameterTreeUI.Renderer
Creates a new instance
Renderer() - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.Renderer
Creates a new renderer
Renderer() - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.Renderer
Creates a new renderer
renderGradient(List<ColorUtils.GradientStop>, int) - Static method in class org.hkijena.jipipe.utils.ColorUtils
 
renderIcon() - Method in class org.hkijena.jipipe.api.validation.contexts.APIErrorValidationReportContext
 
renderIcon() - Method in class org.hkijena.jipipe.api.validation.contexts.CustomValidationReportContext
 
renderIcon() - Method in class org.hkijena.jipipe.api.validation.contexts.GraphNodeValidationReportContext
 
renderIcon() - Method in class org.hkijena.jipipe.api.validation.contexts.GraphValidationReportContext
 
renderIcon() - Method in class org.hkijena.jipipe.api.validation.contexts.InternalErrorValidationReportContext
 
renderIcon() - Method in class org.hkijena.jipipe.api.validation.contexts.JavaExtensionValidationReportContext
 
renderIcon() - Method in class org.hkijena.jipipe.api.validation.contexts.JsonNodeInfoValidationReportContext
 
renderIcon() - Method in class org.hkijena.jipipe.api.validation.contexts.ParameterValidationReportContext
 
renderIcon() - Method in class org.hkijena.jipipe.api.validation.contexts.UnspecifiedValidationReportContext
 
renderIcon() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportContext
 
renderIcon(T) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicEnumParameter
Function that renders the icon.
renderIcon(T) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameter
Function that renders the icon.
renderIcon(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicCategoryEnumParameter
 
renderIcon(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter
 
renderIcon(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter
 
renderIcon(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.FontFamilyParameter
 
renderIcon(String) - Method in class org.hkijena.jipipe.extensions.settings.ProjectsSettings.ProjectTemplateEnum
 
renderIcon(Object) - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnConversionParameter
 
renderIcon(Object) - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnIntegrationParameter
 
RenderImageToRGBAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color
 
RenderImageToRGBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.RenderImageToRGBAlgorithm
 
RenderImageToRGBAlgorithm(RenderImageToRGBAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.RenderImageToRGBAlgorithm
 
renderInputName() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter
 
renderInputName() - Method in class org.hkijena.jipipe.extensions.tables.parameters.processors.ConvertingTableColumnProcessorParameter
 
renderInputName() - Method in class org.hkijena.jipipe.extensions.tables.parameters.processors.ExpressionTableColumnProcessorParameter
 
renderInputName() - Method in class org.hkijena.jipipe.extensions.tables.parameters.processors.IntegratingTableColumnProcessorParameter
 
renderInputSlots() - Method in class org.hkijena.jipipe.api.grouping.GraphWrapperAlgorithmInput
 
renderInputSlots() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Controls whether to render input slots.
RenderJIPipeProjectAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.misc
 
RenderJIPipeProjectAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.misc.RenderJIPipeProjectAlgorithm
 
RenderJIPipeProjectAlgorithm(RenderJIPipeProjectAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.misc.RenderJIPipeProjectAlgorithm
 
renderLabel(String) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.EdgeFeature
 
renderLabel(String) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeature
 
renderLabel(String) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeature
 
renderLabel(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OMEAccessorTypeEnumParameter
 
renderLabel(Measurement) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.ImageStatisticsSetParameter
 
renderLabel(T) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicEnumParameter
Function that renders the label.
renderLabel(T) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameter
Function that renders the label.
renderLabel(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicCategoryEnumParameter
 
renderLabel(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter
 
renderLabel(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter
 
renderLabel(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.FontFamilyParameter
 
renderLabel(String) - Method in class org.hkijena.jipipe.extensions.settings.ProjectsSettings.ProjectTemplateEnum
 
renderLabel(Object) - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnConversionParameter
 
renderLabel(Object) - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnIntegrationParameter
 
renderName() - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItemCollection
 
renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.APIErrorValidationReportContext
 
renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.CustomValidationReportContext
 
renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.GraphNodeSlotValidationReportContext
 
renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.GraphNodeValidationReportContext
 
renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.GraphValidationReportContext
 
renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.InternalErrorValidationReportContext
 
renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.JavaExtensionValidationReportContext
 
renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.JsonNodeInfoValidationReportContext
 
renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.ParameterValidationReportContext
 
renderName() - Method in class org.hkijena.jipipe.api.validation.contexts.UnspecifiedValidationReportContext
 
renderName() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportContext
 
renderOutputName() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter
 
renderOutputName() - Method in class org.hkijena.jipipe.extensions.tables.parameters.processors.ConvertingTableColumnProcessorParameter
 
renderOutputName() - Method in class org.hkijena.jipipe.extensions.tables.parameters.processors.ExpressionTableColumnProcessorParameter
 
renderOutputName() - Method in class org.hkijena.jipipe.extensions.tables.parameters.processors.IntegratingTableColumnProcessorParameter
 
renderOutputSlots() - Method in class org.hkijena.jipipe.api.grouping.GraphWrapperAlgorithmOutput
 
renderOutputSlots() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Controls whether to render output slots.
RenderOverlay3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.overlay
Wrapper around RoiDrawer
RenderOverlay3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.overlay.RenderOverlay3DAlgorithm
Instantiates a new node type.
RenderOverlay3DAlgorithm(RenderOverlay3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.overlay.RenderOverlay3DAlgorithm
Instantiates a new node type.
RenderOverlayAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay
Wrapper around RoiDrawer
RenderOverlayAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
Instantiates a new node type.
RenderOverlayAlgorithm(RenderOverlayAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
Instantiates a new node type.
renderParameterName() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter
 
renderParameterName() - Method in class org.hkijena.jipipe.extensions.tables.parameters.processors.ConvertingTableColumnProcessorParameter
 
renderParameterName() - Method in class org.hkijena.jipipe.extensions.tables.parameters.processors.ExpressionTableColumnProcessorParameter
 
renderParameterName() - Method in class org.hkijena.jipipe.extensions.tables.parameters.processors.IntegratingTableColumnProcessorParameter
 
RenderPipelineRun - Class in org.hkijena.jipipe.extensions.pipelinerender
 
RenderPipelineRun(JIPipeProject, Path, RenderPipelineRunSettings) - Constructor for class org.hkijena.jipipe.extensions.pipelinerender.RenderPipelineRun
 
RenderPipelineRunSettings - Class in org.hkijena.jipipe.extensions.pipelinerender
 
RenderPipelineRunSettings() - Constructor for class org.hkijena.jipipe.extensions.pipelinerender.RenderPipelineRunSettings
 
RenderPipelineRunSettings(RenderPipelineRunSettings) - Constructor for class org.hkijena.jipipe.extensions.pipelinerender.RenderPipelineRunSettings
 
renderPreview() - Method in class org.hkijena.jipipe.extensions.filesystem.resultanalysis.FilesystemDataSlotPreview
 
renderPreview() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCachedDataPreview
Renders the preview if it is not already rendered
renderPreview() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeAsyncResultDataSlotPreview
 
renderPreview() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeDefaultResultDataSlotPreview
 
renderPreview() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultDataSlotPreview
This function is called from outside to render the preview.
RenderSettingsPlugin3D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins3d
 
RenderSettingsPlugin3D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins3d.RenderSettingsPlugin3D
 
renderToComponent(int, int) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeEmptyThumbnailData
 
renderToComponent(int, int) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeGridThumbnailData
 
renderToComponent(int, int) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData
 
renderToComponent(int, int) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeImageThumbnailData
 
renderToComponent(int, int) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeTextThumbnailData
 
renderToComponent(int, int) - Method in interface org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailData
Creates a Swing component that represents the thumbnail
renderTooltip(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OMEAccessorTypeEnumParameter
 
renderTooltip(T) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicEnumParameter
Function that renders the tooltip.
renderTooltip(T) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameter
Function that renders the tooltip.
renderTooltip(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter
 
renderTooltip(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter
 
renderTooltip(Object) - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnConversionParameter
 
renderTooltip(Object) - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnIntegrationParameter
 
renderToRGBWithLUTIfNeeded(ImagePlus, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Renders a non-RGB image to RGB, including LUT
REnvInstaller - Class in org.hkijena.jipipe.extensions.r.installers
 
REnvInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.r.installers.REnvInstaller
 
REnvInstaller.Configuration - Class in org.hkijena.jipipe.extensions.r.installers
 
REnvironment - Class in org.hkijena.jipipe.extensions.r
 
REnvironment() - Constructor for class org.hkijena.jipipe.extensions.r.REnvironment
 
REnvironment(REnvironment) - Constructor for class org.hkijena.jipipe.extensions.r.REnvironment
 
REnvironment.List - Class in org.hkijena.jipipe.extensions.r
A list of REnvironment
REnvironment.RArgumentsVariablesInfo - Class in org.hkijena.jipipe.extensions.r
 
ReorderDimensionsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions
Algorithm that reorders Hyperstack dimensions
ReorderDimensionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm
 
ReorderDimensionsAlgorithm(ReorderDimensionsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm
 
ReorderHyperstackSlicesExpressionAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions
 
ReorderHyperstackSlicesExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ReorderHyperstackSlicesExpressionAlgorithm
 
ReorderHyperstackSlicesExpressionAlgorithm(ReorderHyperstackSlicesExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ReorderHyperstackSlicesExpressionAlgorithm
 
ReorderRoiDimensionsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify
Algorithm that reorders Hyperstack dimensions
ReorderRoiDimensionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ReorderRoiDimensionsAlgorithm
 
ReorderRoiDimensionsAlgorithm(ReorderRoiDimensionsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ReorderRoiDimensionsAlgorithm
 
reorderTasks(List<String>) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon
Reorders the tasks according to the list of IDs.
repaintLowLag() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
repairGraph() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Repairs the graph by removing old nodes and adding missing ones
replaceCompartmentOutput(JIPipeCompartmentOutput) - Static method in class org.hkijena.jipipe.api.compartments.algorithms.IOInterfaceAlgorithm
Replaces a JIPipeCompartmentOutput by an equivalent interface
ReplaceLabelsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
ReplaceLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ReplaceLabelsAlgorithm
 
ReplaceLabelsAlgorithm(ReplaceLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ReplaceLabelsAlgorithm
 
ReplaceLabelsByTableAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
ReplaceLabelsByTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm
 
ReplaceLabelsByTableAlgorithm(ReplaceLabelsByTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm
 
replaceNode(JIPipeGraphNode, JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Replaces a node with another.
replaceWith(JIPipeGraph) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Replaces all contents with the ones in the other graph Does not apply copying!
report(JIPipeValidationReportEntry) - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReport
Reports an issue
report(JIPipeValidationReportContext, JIPipeValidatable) - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReport
Reports a JIPipeValidatable into this report
ReportSettings() - Constructor for class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.JIPipeProject
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport, JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.JIPipeProject
Reports the validity for the target node and its dependencies
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport, JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Reports the validity for the target node and its dependencies
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport, JIPipeGraphNode, Set<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Reports the validity for the target node and its dependencies
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.parameters.DefaultJIPipeParameterGenerator
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in interface org.hkijena.jipipe.api.validation.JIPipeValidatable
Generates a validity report
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ModifyAnnotationScript
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SplitByAnnotationScript
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelIterating
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelSimpleIterating
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.core.nodes.JIPipeCommentNode
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataRowFolder
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileDataSource
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileListDataSource
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderDataSource
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderListDataSource
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathDataSource
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathListDataSource
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.BooleanFormData
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.DoubleFormData
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.EnumFormData
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.GroupHeaderFormData
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.IntegerFormData
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.StringFormData
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingROI2DAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingROI3DAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.MergeChannelsAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsAlgorithm
Deprecated.
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve.ConvolveByParameter2DAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.MaskDrawerFormData
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.ROIDrawerFormData
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.ImageFromMatrix2DAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.RunImageJExporterAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.RunImageJImporterAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.MacroWrapperAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.misc.DataToPreviewAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.MontageToStackAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsScriptAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge.FilterAndMergeRoiByStatisticsScriptAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionLoaderPlugin
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionRegistrationTask
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROImageAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROTableAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.omero.nodes.manage.OMEROCreateDatasetAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListDatasetsAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListGroupsAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListImagesAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListProjectsAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROImageAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROTableAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameter
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameter
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtraction
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.NumberRangeParameterGenerator
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalDataAnnotationNameParameter
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalTextAnnotationNameParameter
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExporterRef
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImporterRef
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRef
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRef
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeNodeInfoRef
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeParameterTypeInfoRef
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2Algorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTablesAlgorithm
Deprecated.
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingJythonScriptAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingPythonScriptAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.python.algorithms.JythonScriptAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingJythonScriptAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingPythonScriptAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.python.algorithms.PythonScriptAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.python.algorithms.SimpleIteratingJythonScriptAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.python.PythonEnvironment
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.python.PythonPackageLibraryEnvironment
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.r.algorithms.IteratingRScriptAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.r.algorithms.MergingRScriptAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.r.REnvironment
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ApplyExpressionToColumnsAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameSingleColumnsAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumnsAlgorithm
Deprecated.
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.tables.nodes.GenerateColumnAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.tables.nodes.GenerateTableFromExpressionAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.tables.nodes.IntegrateColumnsAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.tables.nodes.ModifyAndMergeTablesScript
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.tables.nodes.ModifyTablesScript
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.SortTableRowsAlgorithm
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.tables.nodes.TablesFromScript
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnGeneratorParameter
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.JIPipe
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in interface org.hkijena.jipipe.JIPipeDependency
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.JIPipeMutableDependency
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.JIPipeRegistryIssues
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExtensionProjectValidation
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.ui.extensions.UpdateSitePlugin
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesBuilder
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
 
reportValidity(JIPipeValidationReportContext, JIPipeValidationReport) - Method in class org.hkijena.jipipe.ui.quickrun.QuickRun
 
requestCancelRun() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunExecuterUI
Cancels the run
requestCancelRun() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunQueuePanelUI
Cancels the run
requestFocusInWindow() - Method in class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox
 
requestGCImmediatelyAfterCall() - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter.LambdaSubscriber
 
requestGCImmediatelyAfterCall() - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter.StrongObjectSubscriber
 
requestGCImmediatelyAfterCall() - Method in interface org.hkijena.jipipe.api.events.JIPipeEventEmitter.Subscriber
 
requestGCImmediatelyAfterCall() - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter.WeakObjectSubscriber
 
resetCustomName() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder
 
resetInheritedSlot() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder
Deprecated.
resetLUT() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerOpacityLUTEditor
 
resetParameters() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OMEAccessorParameter
 
resetSearch() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableUI
 
resetView(StandardView) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
 
resetZoom() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
reslice(ImagePlus) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Reslicer
 
ResliceAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions
 
ResliceAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ResliceAlgorithm
 
ResliceAlgorithm(ResliceAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ResliceAlgorithm
 
Reslicer - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
Copy of Slicer that has a proper API
Reslicer() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Reslicer
 
Reslicer.Direction - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
resolve(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage
 
resolve(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage
 
resolve(String) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage
Returns a new storage that resolves to a path inside this storage
resolve(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeReadDataStorage
Returns a new storage that resolves to a path inside this storage
resolve(String) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeWriteDataStorage
Returns a new storage that resolves to a path inside this storage
resolve(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeWriteDataStorage
Returns a new storage that resolves to a path inside this storage
resolve(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPReadDataStorage
 
resolve(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPWriteDataStorage
 
resolve(JIPipeParameterTree) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference
Tries to resolve the path
resolve(String) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
Creates a sub-progress that has the same cancellation and progress, but shows the new category in front of sub-messages
resolve(String, int, int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
Creates a sub-progress that has the same cancellation and progress, but shows the new category in front of sub-messages.
resolve() - Method in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
resolveAndLog(String) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
Applies resolve(logPrepend) and then logs an empty message
resolveAndLog(String, int, int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
Creates a sub-progress that has the same cancellation and progress, but shows the new category in front of sub-messages.
resolveAndLogForEach(String, Collection<T>, BiConsumer<T, JIPipeProgressInfo>) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
Applies a for-each operation where the progress is logged
resolveAndLogForEach(String, T[], BiConsumer<T, JIPipeProgressInfo>) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
Applies a for-each operation where the progress is logged
resolveAndLogForEach(String, int[], BiConsumer<Integer, JIPipeProgressInfo>) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
Applies a for-each operation where the progress is logged
resolveAndLogForEach(String, byte[], BiConsumer<Byte, JIPipeProgressInfo>) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
Applies a for-each operation where the progress is logged
resolveAndLogForEach(String, long[], BiConsumer<Long, JIPipeProgressInfo>) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
Applies a for-each operation where the progress is logged
resolveAndLogForEach(String, short[], BiConsumer<Short, JIPipeProgressInfo>) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
Applies a for-each operation where the progress is logged
resolveAndLogForEach(String, float[], BiConsumer<Float, JIPipeProgressInfo>) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
Applies a for-each operation where the progress is logged
resolveAndLogForEach(String, double[], BiConsumer<Double, JIPipeProgressInfo>) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
Applies a for-each operation where the progress is logged
resolveAndMakeSubDirectory(Path, String) - Static method in class org.hkijena.jipipe.utils.PathUtils
 
resolveAndMakeSubDirectory(Path, Path) - Static method in class org.hkijena.jipipe.utils.PathUtils
 
resolveConflicts() - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager
 
ResolveDependencies - Class in org.hkijena.jipipe.ui.ijupdater
 
ResolveDependencies(Window, FilesCollection) - Constructor for class org.hkijena.jipipe.ui.ijupdater.ResolveDependencies
 
ResolveDependencies(Window, FilesCollection, boolean) - Constructor for class org.hkijena.jipipe.ui.ijupdater.ResolveDependencies
 
ResolveVariableOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
ResolveVariableOperator(int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.ResolveVariableOperator
 
RESOURCE_BASE_PATH - Static variable in class org.hkijena.jipipe.extensions.ij3d.IJ3DPlugin
 
RESOURCE_BASE_PATH - Static variable in class org.hkijena.jipipe.extensions.ijweka.WekaPlugin
 
RESOURCE_BASE_PATH - Static variable in class org.hkijena.jipipe.utils.ResourceUtils
 
RESOURCES - Static variable in class org.hkijena.jipipe.extensions.annotation.AnnotationsPlugin
 
RESOURCES - Static variable in class org.hkijena.jipipe.extensions.cellpose.CellposePlugin
 
RESOURCES - Static variable in class org.hkijena.jipipe.extensions.clij2.CLIJPlugin
 
RESOURCES - Static variable in class org.hkijena.jipipe.extensions.filesystem.FilesystemPlugin
 
RESOURCES - Static variable in class org.hkijena.jipipe.extensions.ij3d.IJ3DPlugin
 
RESOURCES - Static variable in class org.hkijena.jipipe.extensions.ijfilaments.FilamentsPlugin
 
RESOURCES - Static variable in class org.hkijena.jipipe.extensions.ijtrackmate.TrackMatePlugin
 
RESOURCES - Static variable in class org.hkijena.jipipe.extensions.ilastik.IlastikPlugin
 
RESOURCES - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.ImageJAlgorithmsPlugin
 
RESOURCES - Static variable in class org.hkijena.jipipe.extensions.imp.ImpPlugin
 
RESOURCES - Static variable in class org.hkijena.jipipe.extensions.omero.OMEROPlugin
 
RESOURCES - Static variable in class org.hkijena.jipipe.extensions.omnipose.OmniposePlugin
 
RESOURCES - Static variable in class org.hkijena.jipipe.extensions.python.PythonPlugin
 
RESOURCES - Static variable in class org.hkijena.jipipe.extensions.r.RPlugin
 
RESOURCES - Static variable in class org.hkijena.jipipe.extensions.scene3d.Scene3DPlugin
 
RESOURCES - Static variable in class org.hkijena.jipipe.extensions.tables.TablesPlugin
 
RESOURCES - Static variable in class org.hkijena.jipipe.extensions.utils.UtilitiesPlugin
 
RESOURCES - Static variable in class org.hkijena.jipipe.JIPipe
Resource manager for core JIPipe
ResourceUtils - Class in org.hkijena.jipipe.utils
Functions for resource access
ResourceUtils() - Constructor for class org.hkijena.jipipe.utils.ResourceUtils
 
restartGUI() - Static method in class org.hkijena.jipipe.JIPipe
 
RestartJIPipeTool - Class in org.hkijena.jipipe.extensions.tools
 
RestartJIPipeTool(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.tools.RestartJIPipeTool
Creates a new instance
restore() - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal.Snapshot
 
restore() - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournalSnapshot
 
restore() - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal.Snapshot
 
restore() - Method in class org.hkijena.jipipe.ui.history.CurrentStateSnapshot
 
restore(JIPipeProjectWorkbench) - Method in class org.hkijena.jipipe.ui.project.JIPipeProjectTabMetadata
 
restoreCacheFromZIPOrDirectory() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
restoreStandardTabs(boolean, boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
restoreStoragePaths(JIPipeProject, Path) - Static method in class org.hkijena.jipipe.api.run.JIPipeGraphRun
Writes node internal storage paths and output slot storage paths into the graph of the project Used for the legacy result viewer
restrictInputSlotCount(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Restrict the number of input slots
restrictInputTo(Class<? extends JIPipeData>...) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Restricts the slot to specified data types
restrictInputTo(Collection<Class<? extends JIPipeData>>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Restricts the slot to specified data types
restrictOutputSlotCount(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Restrict the number output slots
restrictOutputTo(Class<? extends JIPipeData>...) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Restricts the slot to specified data types
restrictOutputTo(Collection<Class<? extends JIPipeData>>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Restricts the slot to specified data types
resultsTable(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Hough_Circle
 
ResultsTableData - Class in org.hkijena.jipipe.extensions.tables.datatypes
Data containing a ResultsTable
ResultsTableData() - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Creates a new instance
ResultsTableData(Map<String, TableColumn>) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Creates a table from a map of column name to column data
ResultsTableData(Collection<TableColumn>) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Creates a table from a list of columns.
ResultsTableData(ResultsTable) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Wraps a results table
ResultsTableData(ResultsTableData) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Creates a copy
ResultsTableData.Deserializer - Class in org.hkijena.jipipe.extensions.tables.datatypes
 
ResultsTableData.Index - Class in org.hkijena.jipipe.extensions.tables.datatypes
Points to a cell in the table
ResultsTableData.IntegratingColumnOperationEntry - Class in org.hkijena.jipipe.extensions.tables.datatypes
An entry for obtaining statistics/integrated values
ResultsTableData.RowBuilder - Class in org.hkijena.jipipe.extensions.tables.datatypes
Helper class for adding a row into the table
ResultsTableData.Serializer - Class in org.hkijena.jipipe.extensions.tables.datatypes
 
ResultsTableDataImageJExporter - Class in org.hkijena.jipipe.extensions.tables.compat
 
ResultsTableDataImageJExporter() - Constructor for class org.hkijena.jipipe.extensions.tables.compat.ResultsTableDataImageJExporter
 
ResultsTableDataImageJImporter - Class in org.hkijena.jipipe.extensions.tables.compat
 
ResultsTableDataImageJImporter() - Constructor for class org.hkijena.jipipe.extensions.tables.compat.ResultsTableDataImageJImporter
 
ResultsTableDataList - Class in org.hkijena.jipipe.extensions.tables.parameters.collections
ResultsTableDataList() - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.collections.ResultsTableDataList
Creates a new instance
ResultsTableDataList(ResultsTableDataList) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.collections.ResultsTableDataList
Creates a copy
ResultsTableDataListCellRenderer - Class in org.hkijena.jipipe.ui.components.renderers
ResultsTableDataListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.components.renderers.ResultsTableDataListCellRenderer
Creates new instance
ResultsTableDataParameterEditorUI - Class in org.hkijena.jipipe.extensions.tables.parameters
Editor for ResultsTableData
ResultsTableDataParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.ResultsTableDataParameterEditorUI
Creates new instance
ResultsTableDataPreview - Class in org.hkijena.jipipe.extensions.tables
 
ResultsTableDataPreview(JIPipeProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableMetadataRow, JIPipeExportedDataAnnotation) - Constructor for class org.hkijena.jipipe.extensions.tables.ResultsTableDataPreview
Creates a new renderer
ResultsTableFromFile - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources
Imports ResultsTableData from a file
ResultsTableFromFile(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ResultsTableFromFile
 
ResultsTableFromFile(ResultsTableFromFile) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ResultsTableFromFile
 
ResultsTableFromFile.FileFormat - Enum in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources
 
ResultsTableFromGUI - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
Imports ImagePlusData from the GUI
ResultsTableFromGUI(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ResultsTableFromGUI
 
ResultsTableFromGUI(ResultsTableFromGUI) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ResultsTableFromGUI
 
ResultsTableToGUI - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
Imports ImagePlusData from the GUI
ResultsTableToGUI(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ResultsTableToGUI
 
ResultsTableToGUI(ResultsTableToGUI) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ResultsTableToGUI
 
retainAll(Collection<?>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
retainAll(Collection<?>) - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
reverse(byte[]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils
 
reverse(short[]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils
 
reverse(int[]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils
 
reverse(long[]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils
 
reverse(float[]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils
 
reverse(double[]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils
 
reverse(T[]) - Static method in class org.hkijena.jipipe.utils.ArrayUtils
 
reversed(int[]) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.ImgUtils
Return a new reversed array.
reversed(long[]) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.ImgUtils
Return a new reversed array.
reversed(String) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.ImgUtils
Return a reversed string.
RewireConnectionsToolUI - Class in org.hkijena.jipipe.ui.grapheditor.general.nodeui
 
RewireConnectionsToolUI(JIPipeGraphCanvasUI, JIPipeDataSlot, Set<JIPipeDataSlot>) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.nodeui.RewireConnectionsToolUI
 
RExtensionSettings - Class in org.hkijena.jipipe.extensions.r
 
RExtensionSettings() - Constructor for class org.hkijena.jipipe.extensions.r.RExtensionSettings
 
RGBBlueTrackBackground - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
RGBBlueTrackBackground() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.RGBBlueTrackBackground
 
RGBColorSpace - Class in org.hkijena.jipipe.extensions.imagejdatatypes.colorspace
 
RGBColorSpace() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.RGBColorSpace
 
RGBGreenTrackBackground - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
RGBGreenTrackBackground() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.RGBGreenTrackBackground
 
rgbPixelLerp(int, int, double) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
RGBRedTrackBackground - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
RGBRedTrackBackground() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.RGBRedTrackBackground
 
rgbToChannels(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Convert a RGB image to a grayscale image where the RGB channels are split into individual planes
RGBToHexFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.color
 
RGBToHexFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.color.RGBToHexFunction
 
RGBToHSBFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.color
 
RGBToHSBFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.color.RGBToHSBFunction
 
RGBToLABFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.color
 
RGBToLABFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.color.RGBToLABFunction
 
Ribbon - Class in org.hkijena.jipipe.ui.components.ribbon
A simple Ribbon-style panel
Ribbon(Ribbon.Task...) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.Ribbon
 
Ribbon(int, Ribbon.Task...) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.Ribbon
 
Ribbon.Action - Class in org.hkijena.jipipe.ui.components.ribbon
An action within the ribbon
Ribbon.Band - Class in org.hkijena.jipipe.ui.components.ribbon
Secondary organization within one task Creates a label at the bottom of the current tak tab Separated from other bands via a separator line
Ribbon.Task - Class in org.hkijena.jipipe.ui.components.ribbon
The highest-order organization of a ribbon.
RidgeDetector2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment
 
RidgeDetector2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
RidgeDetector2DAlgorithm(RidgeDetector2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
ROI2DRelationMeasurement - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi
 
ROI2DRelationMeasurementColumn - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi
Measurements defined by Measurements.
ROI2DRelationMeasurementExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi
A variable source that contains the ImageJ measurements.
ROI2DRelationMeasurementExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementExpressionParameterVariablesInfo
 
ROI2DRelationMeasurementSetParameter - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi
 
ROI2DRelationMeasurementSetParameter() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementSetParameter
 
ROI2DRelationMeasurementSetParameter(DynamicSetParameter<ROI2DRelationMeasurement>) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementSetParameter
 
ROI2DRelationMeasurementSetParameter(Set<ROI2DRelationMeasurement>) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementSetParameter
 
roi2DtoRoi3D(ROIListData, boolean, boolean, Neighborhood3D, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.ij3d.IJ3DUtils
Converts 2D ROI to 3D ROI
Roi2DToRoi3DConverterAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert
 
Roi2DToRoi3DConverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi2DToRoi3DConverterAlgorithm
 
Roi2DToRoi3DConverterAlgorithm(Roi2DToRoi3DConverterAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi2DToRoi3DConverterAlgorithm
 
ROI3D - Class in org.hkijena.jipipe.extensions.ij3d.datatypes
Wrapper around an Object3D that also provides additional information and methods found within Roi
ROI3D() - Constructor for class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
ROI3D(ROI3D) - Constructor for class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
ROI3D(Object3D) - Constructor for class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
ROI3DCalculatorAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify
 
ROI3DCalculatorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ROI3DCalculatorAlgorithm
 
ROI3DCalculatorAlgorithm(ROI3DCalculatorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ROI3DCalculatorAlgorithm
 
Roi3DDrawer - Class in org.hkijena.jipipe.extensions.ij3d.utils
 
Roi3DDrawer() - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.Roi3DDrawer
 
Roi3DDrawer(Roi3DDrawer) - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.Roi3DDrawer
 
Roi3DFromLabelsAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate
 
Roi3DFromLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm
 
Roi3DFromLabelsAlgorithm(Roi3DFromLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm
 
ROI3DImageJExporter - Class in org.hkijena.jipipe.extensions.ij3d.compat
 
ROI3DImageJExporter() - Constructor for class org.hkijena.jipipe.extensions.ij3d.compat.ROI3DImageJExporter
 
ROI3DImageJImporter - Class in org.hkijena.jipipe.extensions.ij3d.compat
 
ROI3DImageJImporter() - Constructor for class org.hkijena.jipipe.extensions.ij3d.compat.ROI3DImageJImporter
 
ROI3DListCellRenderer - Class in org.hkijena.jipipe.extensions.ij3d.imageviewer
 
ROI3DListCellRenderer() - Constructor for class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROI3DListCellRenderer
 
ROI3DListData - Class in org.hkijena.jipipe.extensions.ij3d.datatypes
 
ROI3DListData() - Constructor for class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
ROI3DListData(ROI3DListData) - Constructor for class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
ROI3DMeasurement - Enum in org.hkijena.jipipe.extensions.ij3d.utils
 
ROI3DMeasurementColumn - Enum in org.hkijena.jipipe.extensions.ij3d.utils
Measurements defined by Measurements.
ROI3DMeasurementExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.ij3d.utils
A variable source that contains the ImageJ measurements.
ROI3DMeasurementExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurementExpressionParameterVariablesInfo
 
ROI3DMeasurementSetParameter - Class in org.hkijena.jipipe.extensions.ij3d.utils
 
ROI3DMeasurementSetParameter() - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurementSetParameter
 
ROI3DMeasurementSetParameter(DynamicSetParameter<ROI3DMeasurement>) - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurementSetParameter
 
ROI3DMeasurementSetParameter(Set<ROI3DMeasurement>) - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurementSetParameter
 
ROI3DOutline - Enum in org.hkijena.jipipe.extensions.ij3d.utils
 
ROI3DRelationMeasurement - Enum in org.hkijena.jipipe.extensions.ij3d.utils
 
ROI3DRelationMeasurementColumn - Enum in org.hkijena.jipipe.extensions.ij3d.utils
Measurements defined by Measurements.
ROI3DRelationMeasurementExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.ij3d.utils
A variable source that contains the ImageJ measurements.
ROI3DRelationMeasurementExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurementExpressionParameterVariablesInfo
 
ROI3DRelationMeasurementSetParameter - Class in org.hkijena.jipipe.extensions.ij3d.utils
 
ROI3DRelationMeasurementSetParameter() - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurementSetParameter
 
ROI3DRelationMeasurementSetParameter(DynamicSetParameter<ROI3DRelationMeasurement>) - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurementSetParameter
 
ROI3DRelationMeasurementSetParameter(Set<ROI3DRelationMeasurement>) - Constructor for class org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurementSetParameter
 
Roi3DTo3DMeshAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert
 
Roi3DTo3DMeshAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm
 
Roi3DTo3DMeshAlgorithm(Roi3DTo3DMeshAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm
 
Roi3DToLabelsAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert
 
Roi3DToLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DToLabelsAlgorithm
 
Roi3DToLabelsAlgorithm(Roi3DToLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DToLabelsAlgorithm
 
Roi3DToMaskAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert
 
Roi3DToMaskAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DToMaskAlgorithm
 
Roi3DToMaskAlgorithm(Roi3DToMaskAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DToMaskAlgorithm
 
Roi3DToRGBAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert
 
Roi3DToRGBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DToRGBAlgorithm
 
Roi3DToRGBAlgorithm(Roi3DToRGBAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DToRGBAlgorithm
 
Roi3DToRoi2DConverterAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert
 
Roi3DToRoi2DConverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DToRoi2DConverterAlgorithm
 
Roi3DToRoi2DConverterAlgorithm(Roi3DToRoi2DConverterAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DToRoi2DConverterAlgorithm
 
ROI_INPUT_SLOT - Static variable in class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.SkeletonToSimplifiedFilamentsFijiAlgorithm
 
ROI_INPUT_SLOT - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm
 
RoiCalculatorAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi
Wrapper around RoiManager
RoiCalculatorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiCalculatorAlgorithm
Instantiates a new node type.
RoiCalculatorAlgorithm(RoiCalculatorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiCalculatorAlgorithm
Instantiates a new node type.
ROIDataFromFile - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources
Loads ROI data from a file via IJ.openFile()
ROIDataFromFile(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ROIDataFromFile
 
ROIDataFromFile(ROIDataFromFile) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ROIDataFromFile
Copies the algorithm
ROIDataFromOMEImage - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources
Loads ROI data from a file via IJ.openFile()
ROIDataFromOMEImage(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ROIDataFromOMEImage
 
ROIDataFromOMEImage(ROIDataFromOMEImage) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ROIDataFromOMEImage
Copies the algorithm
ROIDataPreview - Class in org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis
 
ROIDataPreview(JIPipeProjectWorkbench, JTable, JIPipeDataSlot, JIPipeDataTableMetadataRow, JIPipeExportedDataAnnotation) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ROIDataPreview
Creates a new renderer
RoiDrawer - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
Advanced ROI drawing algorithm with better flexibility compared to the methods of ROIListData
RoiDrawer() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
RoiDrawer(RoiDrawer) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
ROIDrawerFormData - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms
Structural FormData for drawing ROIs
ROIDrawerFormData(List<JIPipeMultiIterationStep>, DrawROIAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.ROIDrawerFormData
 
ROIEditor - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
Parameters to edit ROI and transform Roi via the settings (no-destructive)
ROIEditor() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
ROIEditor(Roi) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
ROIElementDrawingMode - Enum in org.hkijena.jipipe.extensions.imagejdatatypes.util
Determines how elements of ROI are drawn
ROIFilterSettings() - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
ROIFilterSettings(FilterRoi3DByOverlapAlgorithm.ROIFilterSettings) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
ROIFilterSettings() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
ROIFilterSettings(FilterROIByOverlapAlgorithm.ROIFilterSettings) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
RoiFloodFillAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify
Wrapper around RoiManager
RoiFloodFillAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm
Instantiates a new node type.
RoiFloodFillAlgorithm(RoiFloodFillAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm
Instantiates a new node type.
RoiFloodFillAlgorithm.Mode - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify
 
ROIFromGUI - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
Imports ImagePlusData from the GUI
ROIFromGUI(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ROIFromGUI
 
ROIFromGUI(ROIFromGUI) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ROIFromGUI
 
ROIHandler - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
Copy of ROIHandler to
ROIHandler() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIHandler
 
RoiLabel - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi
Moved out of the ImageJ algorithms extension
RoiListCellRenderer - Class in org.hkijena.jipipe.extensions.imageviewer.utils
 
RoiListCellRenderer() - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.RoiListCellRenderer
 
ROIListData - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes
Contains Roi
ROIListData() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Creates an empty set of ROI
ROIListData(List<Roi>) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Creates a deep copy
ROIListData(RoiManager) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Initializes from a RoiManager
RoiManagerImageJExporter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.compat
 
RoiManagerImageJExporter() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.compat.RoiManagerImageJExporter
 
RoiManagerImageJImporter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.compat
 
RoiManagerImageJImporter() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.compat.RoiManagerImageJImporter
 
RoiManagerImageJImporterUI - Class in org.hkijena.jipipe.extensions.imagejdatatypes.compat
Importer around RoiManagerImageJImporter
RoiManagerImageJImporterUI(JIPipeWorkbench, ImageJDataImportOperation) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.compat.RoiManagerImageJImporterUI
 
ROIManagerPlugin2D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager
 
ROIManagerPlugin2D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
ROIManagerPlugin2DInfoContextPanel - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager
 
ROIManagerPlugin2DInfoContextPanel(ROIManagerPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2DInfoContextPanel
 
ROIManagerPlugin2DSelectionContextPanel - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager
 
ROIManagerPlugin2DSelectionContextPanel(ROIManagerPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2DSelectionContextPanel
 
ROIManagerPlugin3D - Class in org.hkijena.jipipe.extensions.ij3d.imageviewer
 
ROIManagerPlugin3D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
ROIManagerPlugin3DInfoContextPanel - Class in org.hkijena.jipipe.extensions.ij3d.imageviewer
 
ROIManagerPlugin3DInfoContextPanel(ROIManagerPlugin3D) - Constructor for class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3DInfoContextPanel
 
ROIManagerPlugin3DSelectionContextPanel - Class in org.hkijena.jipipe.extensions.ij3d.imageviewer
 
ROIManagerPlugin3DSelectionContextPanel(ROIManagerPlugin3D) - Constructor for class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3DSelectionContextPanel
 
ROINameToLabelEntry() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm.ROINameToLabelEntry
 
ROINameToLabelEntry(ROIToLabelsByNameAlgorithm.ROINameToLabelEntry) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm.ROINameToLabelEntry
 
RoiNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories
 
RoiNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory
 
RoiOutline - Enum in org.hkijena.jipipe.extensions.imagejdatatypes.util
Available ways to address the shape of a Roi
RoiOverlapStatisticsVariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi
 
RoiOverlapStatisticsVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiOverlapStatisticsVariablesInfo
 
ROIPicker2DTool - Class in org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager
 
ROIPicker2DTool(ROIManagerPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIPicker2DTool
 
ROIProperties - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw
Limited version of ROIEditor that only contains properties for creating ROI
ROIProperties() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.ROIProperties
 
ROIProperties(ROIProperties) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.ROIProperties
 
RoiPropertiesToAnnotationsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations
 
RoiPropertiesToAnnotationsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
RoiPropertiesToAnnotationsAlgorithm(RoiPropertiesToAnnotationsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
RoiRelationMeasurement - Enum in org.hkijena.jipipe.extensions.imagejdatatypes.util.measure
 
RoiRelationMeasurementSet - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util.measure
 
RoiRelationMeasurementSet() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.RoiRelationMeasurementSet
 
RoiRelationMeasurementSet(RoiRelationMeasurementSet) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.RoiRelationMeasurementSet
 
RoiRelationMeasurementSet(Set<RoiRelationMeasurement>) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.RoiRelationMeasurementSet
 
RoiStatisticsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure
Wrapper around RoiManager
RoiStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm
Instantiates a new node type.
RoiStatisticsAlgorithm(RoiStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm
Instantiates a new node type.
RoiToCentroidAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify
Wrapper around RoiManager
RoiToCentroidAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RoiToCentroidAlgorithm
Instantiates a new node type.
RoiToCentroidAlgorithm(RoiToCentroidAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RoiToCentroidAlgorithm
Instantiates a new node type.
ROIToGUI - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
Imports ImagePlusData from the GUI
ROIToGUI(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ROIToGUI
 
ROIToGUI(ROIToGUI) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ROIToGUI
 
ROIToLabelsByNameAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert
 
ROIToLabelsByNameAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm
 
ROIToLabelsByNameAlgorithm(ROIToLabelsByNameAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm
 
ROIToLabelsByNameAlgorithm.ROINameToLabelEntry - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert
 
ROIToLabelsByNameAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert
 
ROIToLabelsExpressionAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert
 
ROIToLabelsExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm
 
ROIToLabelsExpressionAlgorithm(ROIToLabelsExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm
 
ROIToLabelsExpressionAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert
 
RoiToMaskAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert
Wrapper around RoiManager
RoiToMaskAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm
Instantiates a new node type.
RoiToMaskAlgorithm(RoiToMaskAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm
Instantiates a new node type.
RoiToRGBAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert
Wrapper around RoiDrawer
RoiToRGBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
Instantiates a new node type.
RoiToRGBAlgorithm(RoiToRGBAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
Instantiates a new node type.
role() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeInputSlot
 
role() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeOutputSlot
 
RollingBallBackgroundEstimator2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background
Wrapper around RankFilters
RollingBallBackgroundEstimator2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm
Instantiates a new node type.
RollingBallBackgroundEstimator2DAlgorithm(RollingBallBackgroundEstimator2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm
Instantiates a new node type.
RollingBallBackgroundEstimator2DAlgorithm.BackgroundType - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background
Available background types
RollingBallBackgroundEstimator2DAlgorithm.Method - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background
Available methods
rootPanel - Variable in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
rotate(double, Point2D) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Rotates the ROI around the center Does not change the ROIs in this list
rotate(ImagePlus, double, boolean, Color, boolean, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Rotates the image by a specified amount of degrees to the right
rotate(Vector3d, double) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Rotates the view around the center of view by the specified angle around the given axis (of the image plate).
rotate(MouseEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
This method should be called during the mouse is dragged, if the mouse event should result in a rotation.
RotateRoiAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify
Wrapper around RoiManager
RotateRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RotateRoiAlgorithm
 
RotateRoiAlgorithm(RotateRoiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RotateRoiAlgorithm
 
rotateTabRuns(int, int) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI.TabbedPaneLayout
 
rotateX(double) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Rotates the view around the global rotation center by the specified angle around the x axis (of the image plate).
rotateXY(double, double) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Rotates the view around the center of view by the specified angles around the x and y axis (of the image plate).
rotateY(double) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Rotates the view around the global rotation center by the specified angle around the y axis (of the image plate).
rotateZ(double) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Rotates the view around the global rotation center by the specified angle around the z axis (of the image plate).
rotCenter - Variable in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
 
RoundColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a floor function
RoundColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.RoundColumnOperation
 
RoundedButtonUI - Class in org.hkijena.jipipe.ui.components
 
RoundedButtonUI(int, Color, Color) - Constructor for class org.hkijena.jipipe.ui.components.RoundedButtonUI
 
RoundedLineBorder - Class in org.hkijena.jipipe.utils.ui
Rounded line border that actually works ...
RoundedLineBorder(Paint, int, int) - Constructor for class org.hkijena.jipipe.utils.ui.RoundedLineBorder
 
RoundedLineBorder(Paint, int, int, boolean) - Constructor for class org.hkijena.jipipe.utils.ui.RoundedLineBorder
 
RoundFloatImageAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math
 
RoundFloatImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.RoundFloatImageAlgorithm
 
RoundFloatImageAlgorithm(RoundFloatImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.RoundFloatImageAlgorithm
 
RoundToDecimalsFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.math
 
RoundToDecimalsFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.math.RoundToDecimalsFunction
 
row - Variable in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.Index
 
RowBuilder(ResultsTableData, int) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.RowBuilder
 
RowIndexTableColumn - Class in org.hkijena.jipipe.extensions.tables.datatypes
Generates numbers from 0 to row count
RowIndexTableColumn() - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.RowIndexTableColumn
 
rowToFile - Variable in class org.hkijena.jipipe.ui.ijupdater.FileTableModel
 
RPlugin - Class in org.hkijena.jipipe.extensions.r
 
RPlugin() - Constructor for class org.hkijena.jipipe.extensions.r.RPlugin
 
RScriptParameter - Class in org.hkijena.jipipe.extensions.r.parameters
 
RScriptParameter() - Constructor for class org.hkijena.jipipe.extensions.r.parameters.RScriptParameter
 
RScriptParameter(ScriptParameter) - Constructor for class org.hkijena.jipipe.extensions.r.parameters.RScriptParameter
 
RScriptParameter(String) - Constructor for class org.hkijena.jipipe.extensions.r.parameters.RScriptParameter
 
RSettingsAreValid() - Static method in class org.hkijena.jipipe.extensions.r.RExtensionSettings
Checks the R settings
RSyntaxTextField - Class in org.hkijena.jipipe.ui.components
 
RSyntaxTextField() - Constructor for class org.hkijena.jipipe.ui.components.RSyntaxTextField
 
RSyntaxTextField(RSyntaxDocument) - Constructor for class org.hkijena.jipipe.ui.components.RSyntaxTextField
 
RSyntaxTextField(String) - Constructor for class org.hkijena.jipipe.ui.components.RSyntaxTextField
 
RSyntaxTextField(int, int) - Constructor for class org.hkijena.jipipe.ui.components.RSyntaxTextField
 
RSyntaxTextField(String, int, int) - Constructor for class org.hkijena.jipipe.ui.components.RSyntaxTextField
 
RSyntaxTextField(RSyntaxDocument, String, int, int) - Constructor for class org.hkijena.jipipe.ui.components.RSyntaxTextField
 
RSyntaxTextField(int) - Constructor for class org.hkijena.jipipe.ui.components.RSyntaxTextField
 
RTokenMaker - Class in org.hkijena.jipipe.extensions.r.ui
 
RTokenMaker() - Constructor for class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
Constructor.
RTokenMaker(Reader) - Constructor for class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
Creates a new scanner There is also a java.io.InputStream version of this constructor.
RTokenMaker(InputStream) - Constructor for class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
Creates a new scanner.
run() - Method in class org.hkijena.jipipe.api.backups.CollectBackupsRun
 
run() - Method in class org.hkijena.jipipe.api.backups.PruneBackupsRun
 
run() - Method in class org.hkijena.jipipe.api.cache.JIPipeCacheClearAllRun
 
run() - Method in class org.hkijena.jipipe.api.cache.JIPipeCacheClearOutdatedRun
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compartments.algorithms.IOInterfaceAlgorithm
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
 
run() - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation.ImportDataRun
 
run() - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGenerationRun
 
run() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstaller
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode
 
run() - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseBuilderRun
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Runs the workload
run() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction
 
run() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.FilterByAnnotation
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.MergeDataSlots
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ModifyAnnotationScript
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SplitByAnnotation
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SplitByAnnotationScript
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNode
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.core.nodes.JIPipeCommentNode
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileDataSource
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileListDataSource
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderDataSource
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderListDataSource
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.OutputFolderDataSource
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathDataSource
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathListDataSource
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.forms.algorithms.FormGeneratorAlgorithm
 
run(JIPipeDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.forms.algorithms.FormGeneratorAlgorithm
This method should add new FormData elements into the combined slot.
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.forms.algorithms.IteratingFormProcessorAlgorithm
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.forms.algorithms.MergingFormProcessorAlgorithm
 
run(JIPipeDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.forms.algorithms.SimpleFormGeneratorAlgorithm
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.forms.algorithms.SimpleIteratingFormProcessorAlgorithm
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsScriptAlgorithm
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.DefineRectangularRoiAlgorithm
Deprecated.
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge.FilterAndMergeRoiByStatisticsScriptAlgorithm
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm
Deprecated.
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
run() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImagePlusResultImportRun
 
run() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.OMEImageResultImportRun
 
run() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D.ImageLoaderRun
 
run() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D.UniverseInitializerRun
 
run() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D.UpdateLutAndCalibrationRun
 
run() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.ApplyMultiOrthoSlicerRun
 
run() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.ApplyOrthoSlicerRun
 
run() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.RawImage2DExporterRun
 
run() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Stack2DExporterRun
 
run() - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Video2DExporterRun
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersAlgorithm
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersTableAlgorithm
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.ExtractParametersAlgorithm
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.extensions.nodeexamples.LoadExampleContextMenuAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.extensions.nodetemplate.AddTemplateContextMenuAction
 
run() - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderRun
 
run() - Method in class org.hkijena.jipipe.extensions.nodetoolboxtool.NodeToolBox.ReloadListRun
 
run() - Method in class org.hkijena.jipipe.extensions.pipelinerender.RenderPipelineRun
 
run() - Method in class org.hkijena.jipipe.extensions.python.adapter.JIPipePythonAdapterUpdateChecker
 
run() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
 
run() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller
 
run() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectCondaEnvPythonInstaller
 
run() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectSystemPythonInstaller
 
run() - Method in class org.hkijena.jipipe.extensions.python.installers.SelectVirtualEnvPythonInstaller
 
run() - Method in class org.hkijena.jipipe.extensions.r.installers.REnvInstaller
 
run() - Method in class org.hkijena.jipipe.extensions.scene3d.utils.Scene3DToColladaExporter
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.DefineTablesAlgorithm
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.ModifyAndMergeTablesScript
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.ModifyTablesScript
 
run(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.TablesFromScript
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.extensions.utils.contextmenu.ParameterExplorerContextMenuAction
 
run() - Method in class org.hkijena.jipipe.JIPipeGUICommand
 
run() - Method in class org.hkijena.jipipe.JIPipeRunAlgorithmCommand
 
run() - Method in class org.hkijena.jipipe.JIPipeRunCommand
 
run() - Method in class org.hkijena.jipipe.JIPipeRunCustomAlgorithmCommand
 
run() - Method in class org.hkijena.jipipe.ui.ArchiveProjectToDirectoryRun
 
run() - Method in class org.hkijena.jipipe.ui.ArchiveProjectToZIPRun
 
run() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataExporterRun
 
run() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToFilesByMetadataExporterRun
 
run() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToOutputExporterRun
 
run() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToZIPExporterRun
 
run() - Method in class org.hkijena.jipipe.ui.cache.importers.JIPipeImportCachedSlotOutputRun
 
run() - Method in class org.hkijena.jipipe.ui.datatracer.CollectTraceRun
 
run() - Method in class org.hkijena.jipipe.ui.documentation.DownloadOfflineManualRun
 
run() - Method in class org.hkijena.jipipe.ui.extensions.ActivateAndApplyUpdateSiteRun
 
run() - Method in class org.hkijena.jipipe.ui.extensions.DeactivateAndApplyUpdateSiteRun
 
run() - Method in class org.hkijena.jipipe.ui.ExtractTemplateZipFileRun
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphCopyNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphCutNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphDuplicateNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphPasteNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentCopyNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentCutNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentPasteNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddBookmarkNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddNewCompartmentUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.AddNewNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ClearCacheNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.CollapseIOInterfaceNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DeleteCompartmentUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DeleteNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisablePassThroughNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableSaveOutputsNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.DisableVirtualOutputNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnablePassThroughNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableSaveOutputsNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.EnableVirtualOutputsNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ExportCompartmentAsJsonNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ExportCompartmentToNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.ExportNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.GroupNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.InvertSelectionNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.IsolateNodesUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.JsonAlgorithmToGroupNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.LockNodeLocationSizeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.LowerUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIDownContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUILeftContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIRightContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.navigation.MoveNodeUIUpContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeContextActionWrapperUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in interface org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeUIContextAction
Runs the workload
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.OpenCacheBrowserInWindowUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RaiseUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RemoveBookmarkNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RunAndShowIntermediateResultsNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RunAndShowResultsNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SelectAllNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SelectAndMoveNodeHereNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SendToBackgroundUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SendToForegroundUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SetNodeHotkeyContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UnlockNodeLocationSizeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheOnlyPredecessorsNodeUIContextAction
 
run(JIPipeGraphCanvasUI, Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheShowIntermediateNodeUIContextAction
 
run() - Method in class org.hkijena.jipipe.ui.grapheditor.nodefinder.JIPipeNodeFinderDialogUI.ReloadListRun
 
run() - Method in class org.hkijena.jipipe.ui.ijupdater.ActivateUpdateSiteRun
 
run() - Method in class org.hkijena.jipipe.ui.ijupdater.ApplyRun
 
run() - Method in class org.hkijena.jipipe.ui.ijupdater.RefreshRepositoryRun
 
run() - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.RebuildReportRun
 
run() - Method in class org.hkijena.jipipe.ui.project.LoadResultDirectoryIntoCacheRun
 
run() - Method in class org.hkijena.jipipe.ui.project.LoadResultZipIntoCacheRun
 
run() - Method in class org.hkijena.jipipe.ui.project.SaveProjectAndCacheToDirectoryRun
 
run() - Method in class org.hkijena.jipipe.ui.project.SaveProjectAndCacheToZipRun
 
run() - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderRun
 
run() - Method in class org.hkijena.jipipe.ui.quickrun.QuickRun
 
run() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun
 
run() - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog
 
RUN_NODE_CONTEXT_MENU_ENTRIES - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
RunAndShowIntermediateResultsNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
RunAndShowIntermediateResultsNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RunAndShowIntermediateResultsNodeUIContextAction
 
RunAndShowResultsAction - Class in org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.actions
 
RunAndShowResultsAction(boolean) - Constructor for class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.actions.RunAndShowResultsAction
 
RunAndShowResultsNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
RunAndShowResultsNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.RunAndShowResultsNodeUIContextAction
 
runCacheIntermediateResults(JIPipeGraphNode) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
RunCancellationExecuteWatchdog(long, JIPipeProgressInfo, ProcessUtils.ExtendedExecutor) - Constructor for class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationExecuteWatchdog
Creates a new watchdog with a given timeout.
RunCancellationWatchdog(JIPipeProgressInfo) - Constructor for class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog
 
runColocalization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.CustomColoc2
 
runConda(String...) - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
Runs the conda executable (for postprocessing)
RunExpressionAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms
 
RunExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.RunExpressionAlgorithm
 
RunExpressionAlgorithm(RunExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.RunExpressionAlgorithm
 
RunExpressionAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.utils.algorithms
 
RunFunctionFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
RunFunctionFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.RunFunctionFunction
 
runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm
Generates data and puts the output into the specified output slot
runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm
Generates data and puts the output into the specified output slot
runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawMaskAlgorithm
 
runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawROIAlgorithm
 
runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
 
runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm
Deprecated.
 
runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm2
 
runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingZeroImage
 
runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.GenerateMissingRoiListsAlgorithm
 
runGenerator(JIPipeMultiIterationStep, JIPipeInputDataSlot, JIPipeOutputDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.UsePlaceholderForMissingDataAlgorithm
 
runIlastik(ProcessEnvironment, List<String>, JIPipeProgressInfo, boolean) - Static method in class org.hkijena.jipipe.extensions.ilastik.IlastikPlugin
Runs Ilastik
RunIlastikMenuExtension - Class in org.hkijena.jipipe.extensions.ilastik
 
RunIlastikMenuExtension(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.ilastik.RunIlastikMenuExtension
Creates a new instance
RunImageJExporterAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
 
RunImageJExporterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.RunImageJExporterAlgorithm
 
RunImageJExporterAlgorithm(RunImageJExporterAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.RunImageJExporterAlgorithm
 
RunImageJImporterAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io
 
RunImageJImporterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.RunImageJImporterAlgorithm
 
RunImageJImporterAlgorithm(RunImageJImporterAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.RunImageJImporterAlgorithm
 
runInDialog(JIPipeWorkbench, Component, JIPipeRunnable) - Static method in class org.hkijena.jipipe.ui.running.JIPipeRunExecuterUI
 
runInDialog(JIPipeWorkbench, Component, JIPipeRunnable, JIPipeRunnerQueue) - Static method in class org.hkijena.jipipe.ui.running.JIPipeRunExecuterUI
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm
Runs code on one data row
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm
Runs code on one data row
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm
Runs code on one data row
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm
Runs code on one data row
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm
Runs code on one data row
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm
Runs code on one data row
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm
Runs code on one data row
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByExpression
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByProjectPaths
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithData
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithDataString
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithSourceSlot
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ConvertToAnnotationTable
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.DataAnnotationToStringAnnotation
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractAndReplaceAnnotation
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractDataAnnotation
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.FilterByAnnotationIfElse
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.GenerateUniqueAnnotation
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.MergeAnnotations
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ModifyAnnotationScript
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.OverwriteAnnotations
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveAnnotationAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveDataAnnotations
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RenameAnnotation
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RenameDataAnnotation
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SetSingleAnnotation
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SimplifyAnnotationsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SplitByAnnotationScript
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.datasources.AnnotationTableFromFile
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.ImportCellposeModelAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.ImportCellposeSizeModelAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelIterating
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelSimpleIterating
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2PullAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2PushAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotateWithPathProperties
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotationTableToPaths
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotationToPath
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ConcatenateByParameter
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ConcatenatePaths
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ConvertDataToOutputPath
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ConvertToExportedPath
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.CopyPath
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.CreateDirectory
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportData
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter2
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataTable
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataTableByParameter
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExtractFileName
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExtractParent
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.FilterPaths
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataRowFolder
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableArchive
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableDirectory
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ListFiles
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ListSubfolders
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ModifyPath
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ModifyPathWithExpression
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.RelativizeByParameter
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.RelativizePaths
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.RenameByString
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.SimpleFileAnnotationGenerator
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.SimpleFolderAnnotationGenerator
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.SimplePathAnnotationGenerator
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.DownloadFilesDataSource
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathFromUserDataSource
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.ProjectUserFolderDataSource
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.binary.DistanceMap3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.binary.ErodedVolumeFraction3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.binary.Voronoi3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.binary.Watershed3DSplittingAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.EdgeFilter3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.FindMaxima3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.SymmetryFilter3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.ImportROI3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.overlay.ExtractOverlay3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.overlay.RemoveOverlay3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.overlay.RenderOverlay3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.overlay.SetOverlay3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi2DToRoi3DConverterAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DToLabelsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DToMaskAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DToRGBAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DToRoi2DConverterAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.ExportROI3DAlgorithm
Deprecated.
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.ExportROI3DAlgorithm2
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DStatisticsAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.merge.MergeROI3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.ExtractROI3DMetadataAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.RemoveROI3DMetadataAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.SetROI3DMetadataFromTableAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ColorRoi3DByNameAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ColorRoi3DByStatisticsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ROI3DCalculatorAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process.OutlineRoi3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.ExplodeRoi3DListAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.HysteresisSegmentation3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.NucleiSegmentation3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.Watershed3DSegmentationAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRGBAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.FilterFilamentEdgesByProperties
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.FilterFilamentsByProperties
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.FilterFilamentVerticesByProperties
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.RemoveBorderFilaments
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.ImportFilamentsFromJsonAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.SkeletonToFilaments2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.SkeletonToFilaments3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.SkeletonToSimplifiedFilamentsFijiAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.measure.MeasureEdgesAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.measure.MeasureFilamentsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.measure.MeasureVerticesAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.merge.MergeFilamentsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ErodeEndVerticesAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.SetVertexIntensityFromImageAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.SetVertexMetadataFromImageAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.SetVertexPhysicalSizeFromImageAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.SetVertexRadiusFromImageAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.RemoveDuplicateVerticesAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.SimplifyFilamentsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.SmoothFilamentsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.split.SplitFilamentsIntoConnectedComponentsAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertTracksToRoiNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotDetectorNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.detectors.CreateSpotTrackerNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.MeasureSpotsNode
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.MergeSpotsNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SplitSpotsNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SpotDetectorNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SpotFilterNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SpotsToRGBNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.MeasureBranchesNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.MeasureEdgesNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.MeasureTracksNode
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.MergeTracksNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.SplitTracksNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TrackFilterNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TrackingNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TrackSchemeRendererNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TracksToRGBNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.ImportWekaModelFromFileAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaClassification2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaClassification3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingLabels2DAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingLabels2DAlgorithm2
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingMask2DAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingMask2DAlgorithm2
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingROI2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingROI3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.ExportIlastikHDF5ImageAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.ImportIlastikHDF5ImageAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.ImportIlastikModel
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.algorithms.CreateIJ2OutOfBoundsFactoryAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.algorithms.CreateIJ2ShapeAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.ImageJ2OpNode
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnnotateByImageStatisticsExpressionAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.BinarizeAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.BitwiseLogicalOperationAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConditionalInverterAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConvexifyAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.DistanceTransformWatershed2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.KeepLargestRegionAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.RemoveLargestRegionAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.UltimateErodedPoints2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.VolumeOpening2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.VolumeOpening3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.Voronoi2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.BoxFilter2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.GaussianBlur2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurFilter2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurGreyscale8U2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurRGB2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.CopyPhysicalDimensionsBetweenImagesAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.BlendImagesAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.ColorToGreyscaleExpression2D
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.CombineChannelsToRGBAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.InvertColorsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.MergeChannelsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.OverlayImagesAlgorithm
Deprecated.
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.RenderImageToRGBAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SetToColorAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SetToValueAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsAlgorithm
Deprecated.
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitRGBChannelsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.IlluminationCorrection2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageTo16BitAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageTo32BitAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageTo8BitAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageToHSBAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageToLABAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageToRGBAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ImageToMatrixAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ImageToTableAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ImageToTableColumnAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.MatrixToImageAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableColumnToImageAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableToImageAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve.ConvolveByImage2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve.ConvolveByParameter2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.OMEImageFromImagePlus
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.CreateStackAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.Merge2DToHyperstackAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ReorderHyperstackSlicesExpressionAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ResliceAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackCombinerAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackInverterAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackToDimensionMerger2Algorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackToDimensionMergerAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.SobelEdgeDetectorAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.FrangiVesselnessFeatures
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LaplacianOfGaussian2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.fft.FFT2DForwardTransform
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.fft.FFT2DInverseTransform
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.fft.FFT2DSwapQuadrants
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateStructureElement2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateStructureElement3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateZeroImage
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.ImageFromMatrix2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImage2Algorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportROIAlgorithm
Deprecated.
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportROIAlgorithm2
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm
Deprecated.
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm2
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm
Deprecated.
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ImagePlusFromGUI
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ImagePlusToGUI
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ResultsTableFromGUI
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ResultsTableToGUI
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ROIFromGUI
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ROIToGUI
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.RunImageJExporterAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.RunImageJImporterAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.CropLabelsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.DilateLabelsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ExpandLabelsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ExtractLabelStatisticsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByIdAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByMaskAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByThicknessAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.RemoveBorderLabelsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.RemoveLargestLabelAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.GetLabelBoundariesAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.KeepLargestLabelAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToMaskAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToRGBAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.OverlapMeasureLabelsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.RemapLabelsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ReplaceLabelsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.SeparateLabelsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.ApplyLUTAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.LUTInverterAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.RemoveLUTAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorMapAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromImageAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.MacroWrapperAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyColorMathExpression2DExpression
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyMath2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyMathExpression2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyTransform2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ApplyDistanceTransform2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.GeodesicDistanceMap2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.LabelChamferDistanceMap3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.DivideByMaximumAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateFromMathExpression2D
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.Hessian2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DExpression
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DMergingAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMaxima2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMaxima3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMinima2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMinima3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ImposeMaxima2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ImposeMaxima3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMaximumFilter2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMinimumFilter2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalVarianceFilter2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMaxima2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMaxima3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMinima2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMinima3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.RemoveNaNFilter2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.RoundFloatImageAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.ChangeImageMetadataFromExpressionsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.ExtractImageMetadataAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.RemoveImageMetadataAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.SetImageMetadataFromTableAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.misc.DataToPreviewAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.misc.RenderJIPipeProjectAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage2
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.MontageToStackAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontage2Algorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.FindHoles2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologicalReconstruction2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologicalReconstruction3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyFillHoles2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyInternalGradient2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyOutline2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologySkeletonize2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologySkeletonize3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.AddNoise2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.AddSaltAndPepperNoise2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.DespeckleFilter2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.ExtractOMEROIAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.ExtractOMEXMLAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.ExtractOverlayAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RemoveOverlayAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.SetOverlayAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.CropToRoiAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawOvalRoiAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsScriptAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.RemoveBorderRoisAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.SliceROIListAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.AppendRectangularRoiAlgorithm
Deprecated.
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.MaskToRoiAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.ReferencedAppendRectangularRoiAlgorithm
Deprecated.
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.ReferencedDefineRectangularRoiAlgorithm
Deprecated.
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.GetRoiImageAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.CountROIAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge.AddRoiListsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge.FilterAndMergeRoiByStatisticsScriptAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge.MergeRoiListsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByNameAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.OutlineRoiAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ReorderRoiDimensionsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RoiToCentroidAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RotateRoiAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ScaleRoiAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.ExtractROIMetadataAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.RemoveROIMetadataAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetROIMetadataFromTableAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.register.RegisterRoiToImageByBrightnessAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiCalculatorAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SetRoiImageAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm
Deprecated.
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.split.ExplodeRoiAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.split.SplitRoiAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.UnsetRoiImageAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.sharpen.LaplacianSharpen2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.HistogramGenerator
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ColorThresholdExpression2D
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.FastCircularHoughSegmentation2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.LinesHoughDetection2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.PercentileThreshold8U2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ThresholdByAnnotation2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.MergeImagesAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformFlip2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.Warp2DAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ApplyDisplayContrastAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.BioFormatsExporter
Deprecated.
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.BioFormatsExporter2
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color.ColorSpaceConverterAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ImagePlusFromFile
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ImportLUTAsRGBFromFile
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ResultsTableFromFile
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ROIDataFromFile
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ROIDataFromOMEImage
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImageTypeConverter
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.SetBioFormatsExporterSettings
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imp.nodes.ConvertImpImageToImagePlusAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imp.nodes.ExportImpImageAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imp.nodes.ImportImpImageAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imp.nodes.SetImpAlphaChannelAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imp.nodes.SplitImpAlphaChannelAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.AnnotationsToParametersAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.ConvertParametersToTableAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersFromTableAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.MergeParametersAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.ParametersToAnnotationsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMERODatasetReferenceDataSource
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROGroupReferenceDataSource
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROImageReferenceDataSource
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROProjectReferenceDataSource
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROImageAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROTableAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.nodes.manage.OMEROCreateDatasetAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListDatasetsAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListGroupsAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListImagesAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListProjectsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROImageAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROTableAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2Algorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTablesAlgorithm
Deprecated.
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingJythonScriptAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingPythonScriptAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingJythonScriptAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingPythonScriptAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.python.algorithms.SimpleIteratingJythonScriptAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.r.algorithms.IteratingRScriptAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.r.algorithms.MergingRScriptAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.CreateLineMeshAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.CreateSphereMeshAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.ExportScene3DToColladaAlgorithm
Deprecated.
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.ExportScene3DToColladaAlgorithm2
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.GroupSceneAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.MaskTo3DMeshAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.MergeScenesAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.datasources.ImportJsonAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.datasources.ImportStringAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.datasources.ImportXMLAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.datasources.StringDefinitionDataSource
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.AnnotateWithJsonDataAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.ExtractJsonDataAsTableAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.ExtractTextFromJsonAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.AnnotateWithTextDataAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.ProcessTextDataAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.TableToCSVTextAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.TextDataToTableAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.AnnotateWithXPathDataAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractTextFromXMLAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.PrettifyXMLAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AddAnnotationColumnsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateDataWithTableValues
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.ConvertAnnotationTableToAnnotatedTables
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ApplyExpressionToColumnsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnsToAnnotationsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnToNumericAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnToStringAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ConvertColumnsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RemoveColumnAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameSingleColumnsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumns2Algorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumnsAlgorithm
Deprecated.
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.SortTableColumnsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.filter.FilterTableRowsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.filter.FilterTablesAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.filter.SliceTableRowsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.GenerateColumnAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.GenerateTableFromExpressionAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.IntegrateColumnsAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeColumnsAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSimpleAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableRowsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.ModifyTableColumnNamesAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.ModifyTablesScript
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm
Deprecated.
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.SortTableRowsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableByColumnsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableIntoColumnsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableIntoRowsAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.MeltTableAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.UnMeltTableAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.ConverterAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.AnnotateWithDataTableProperties
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.MergeDataToTableAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PullDataTableAnnotations
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PushDataTableAnnotations
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.distribute.DistributeDataRandomlyByCountAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.distribute.DistributeDataRandomlyByPercentageAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.DuplicateDataAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.ImportJIPipeSlotFolderAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.CrasherAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.IterationStepSlicer
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.PathsToJIPipeProjectParametersAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.RunJIPipeProjectAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessIteratingAlgorithm
 
runIteration(JIPipeMultiIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessMergingAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.RunExpressionAlgorithm
 
runIteration(JIPipeSingleIterationStep, JIPipeIterationContext, JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.ToDataStringAlgorithm
 
RunJIPipeProjectAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms.meta
Runs a JIPipe project
RunJIPipeProjectAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.meta.RunJIPipeProjectAlgorithm
 
RunJIPipeProjectAlgorithm(RunJIPipeProjectAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.meta.RunJIPipeProjectAlgorithm
 
RunMenuItem(JIPipeRunnerQueue, JIPipeRunWorker) - Constructor for class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton.RunMenuItem
 
runOnImage(ImagePlus, String, Object...) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Runs a command on an ImageJ image
runOnImage(ImagePlus, PlugIn, Object...) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Runs a command on a copy of an ImageJ image
runOnNewImage(ImagePlus, String, Object...) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Runs a command on a copy of an ImageJ image
runOnNewImage(ImagePlus, PlugIn, Object...) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Runs a command on a copy of an ImageJ image
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm
Runs a parameter set iteration
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithAnnotationTable
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.GenerateRandomUniqueAnnotation
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveArrayAnnotationsAlgorithm
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveNAAnnotationColumnsAlgorithm
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelIterating
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelSimpleIterating
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.TemporaryFileDataSource
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.TemporaryFolderDataSource
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.ExportROI3DAlgorithm
Deprecated.
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawMaskAlgorithm
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawROIAlgorithm
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportROIAlgorithm
Deprecated.
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm
Deprecated.
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.CountROIAlgorithm
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.BioFormatsExporter
Deprecated.
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.python.algorithms.JythonScriptAlgorithm
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.python.algorithms.PythonScriptAlgorithm
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.ExportScene3DToColladaAlgorithm
Deprecated.
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.DataSlicer
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.ExtractTableAlgorithm
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SelectDataTableRowsAlgorithm
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SleepAlgorithm
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByAnnotationsAlgorithm
 
runParameterSet(JIPipeGraphNodeRunContext, JIPipeProgressInfo, List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByExpressionAlgorithm
 
runPassThrough(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.compartments.algorithms.IOInterfaceAlgorithm
 
runPassThrough(JIPipeProgressInfo, JIPipeSingleIterationStep) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm
A pass-through variant for iterating algorithms.
runPassThrough(JIPipeProgressInfo, JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm
A pass-through variant for merging algorithms.
runPassThrough(JIPipeProgressInfo, JIPipeSingleIterationStep) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm
A pass-through variant for iterating algorithms.
runPassThrough(JIPipeProgressInfo, JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm
A pass-through variant for merging algorithms.
runPassThrough(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
Runs the pass through.
runPassThrough(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithAnnotationTable
 
runPassThrough(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.MergeAnnotations
 
runPassThrough(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
runPassThrough(JIPipeGraphNodeRunContext, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.CountROIAlgorithm
 
runPip(String...) - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller
 
runProcess(ProcessEnvironment, JIPipeExpressionVariablesMap, Map<String, String>, boolean, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.ProcessUtils
Runs a process
RunProcessIteratingAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms.processes
 
RunProcessIteratingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessIteratingAlgorithm
 
RunProcessIteratingAlgorithm(RunProcessIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessIteratingAlgorithm
 
RunProcessMergingAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms.processes
 
RunProcessMergingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessMergingAlgorithm
 
RunProcessMergingAlgorithm(RunProcessMergingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessMergingAlgorithm
 
runProject(JIPipeProject, Path, int) - Static method in class org.hkijena.jipipe.JIPipe
Runs a project in the current thread.
runProject(JIPipeProject, JIPipeGraphRunConfiguration) - Static method in class org.hkijena.jipipe.JIPipe
Runs a project in the current thread.
runPython(String, PythonEnvironment, List<Path>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
 
runPython(Path, PythonEnvironment, List<Path>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
Runs a Python script file
runPython(String[], PythonEnvironment, List<Path>, Map<String, String>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
Runs Python with a set of arguments
runR(String, REnvironment, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.r.RUtils
 
runR(Path, REnvironment, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.r.RUtils
 
runRegistrationTask(JsonExtensionRegistrationTask) - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionLoaderPlugin
Immediately runs a registration task.
runRegistrationTasks() - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Attempts to run registration tasks that have registered dependencies
RunSingleAlgorithmSettingsPanel - Class in org.hkijena.jipipe.ui.compat
 
RunSingleAlgorithmSettingsPanel(JIPipeWorkbench, JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmSettingsPanel
 
RunSingleAlgorithmSettingsPanelIOEditor - Class in org.hkijena.jipipe.ui.compat
 
RunSingleAlgorithmSettingsPanelIOEditor(RunSingleAlgorithmSettingsPanel) - Constructor for class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmSettingsPanelIOEditor
 
RunSingleAlgorithmSettingsPanelIOEditorInputUI - Class in org.hkijena.jipipe.ui.compat
 
RunSingleAlgorithmSettingsPanelIOEditorInputUI(RunSingleAlgorithmSettingsPanelIOEditor, String) - Constructor for class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmSettingsPanelIOEditorInputUI
 
RunSingleAlgorithmSettingsPanelIOEditorOutputUI - Class in org.hkijena.jipipe.ui.compat
 
RunSingleAlgorithmSettingsPanelIOEditorOutputUI(RunSingleAlgorithmSettingsPanelIOEditor, String) - Constructor for class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmSettingsPanelIOEditorOutputUI
 
RunSingleAlgorithmWindow - Class in org.hkijena.jipipe.ui.compat
RunSingleAlgorithmWindow(Context) - Constructor for class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmWindow
 
RunSingleAlgorithmWindow(Context, JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmWindow
 
RunSingleAlgorithmWindow(Context, Class<? extends JIPipeGraphNode>) - Constructor for class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmWindow
 
runtimePartitionEquals(JIPipeGraphNode, JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRun
 
RuntimePartitionReferenceParameter - Class in org.hkijena.jipipe.api.runtimepartitioning
 
RuntimePartitionReferenceParameter() - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceParameter
 
RuntimePartitionReferenceParameter(int) - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceParameter
 
RuntimePartitionReferenceParameter(RuntimePartitionReferenceParameter) - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceParameter
 
RuntimePartitionReferenceParameterEditorUI - Class in org.hkijena.jipipe.api.runtimepartitioning
 
RuntimePartitionReferenceParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceParameterEditorUI
Creates new instance
RuntimeSettings - Class in org.hkijena.jipipe.extensions.settings
Settings related to how algorithms are executed
RuntimeSettings() - Constructor for class org.hkijena.jipipe.extensions.settings.RuntimeSettings
Creates a new instance
runUpdateCache(JIPipeGraphNode) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
runUpdateCacheLater(JIPipeGraphNode) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
RUtils - Class in org.hkijena.jipipe.extensions.r
 
RUtils() - Constructor for class org.hkijena.jipipe.extensions.r.RUtils
 

S

safeJsonify(String) - Static method in class org.hkijena.jipipe.utils.StringUtils
Removes all spaces, and filesystem-unsafe characters from the string and replaces them with dashes Duplicate dashes are removed
sameChannel(int) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
sameFrame(int) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
Sauvola(ImageProcessor, int, double, double, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm
 
SauvolaLocalAutoThreshold2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local
Segmenter node that thresholds via an auto threshold Based on code from Auto_Local_Threshold
SauvolaLocalAutoThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm
 
SauvolaLocalAutoThreshold2DAlgorithm(SauvolaLocalAutoThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm
Copies the algorithm
save(Path) - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
Saves the settings to the specified file
save() - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
Saves the settings to the default settings file
save(Path) - Method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry
Saves the settings to the specified file
save() - Method in class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry
Saves the settings to the default settings file
save(Path) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
save(Path) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Saves the ROI list into the selected path
saveAsCSV(Path) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
Saves the table to CSV
saveAsCSV(Path) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Saves the table as CSV
saveAsJson(Path) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
Saves the table to JSON
saveAsXLSX(Path) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Saves the table as Excel file
saveDataAnnotationRow_(JIPipeWriteDataStorage, JIPipeProgressInfo, int, List<Dimension>, JIPipeProgressInfo, JIPipeDataAnnotation, Map<String, String>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
NOT THREAD-SAFE
saveDirectory(Component, FileChooserSettings.LastDirectoryKey, String) - Static method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
Lets the user choose a directory
saveFile(Component, FileChooserSettings.LastDirectoryKey, String, FileNameExtensionFilter...) - Static method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
Lets the user choose a file
saveObjectsToStream(OutputStream, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
saveObjectToStream(OutputStream) - Method in class org.hkijena.jipipe.extensions.ij3d.utils.ExtendedObject3DVoxels
Saves the voxels to a stream
savePath(Component, FileChooserSettings.LastDirectoryKey, String) - Static method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
Lets the user choose a file or directory
saveProject(Path) - Method in class org.hkijena.jipipe.api.JIPipeProject
Saves the project
saveProject(Writer) - Method in class org.hkijena.jipipe.api.JIPipeProject
Saves the project
saveProject(OutputStream) - Method in class org.hkijena.jipipe.api.JIPipeProject
Saves the project
saveProject(Path) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
Saves the extension
saveProjectAndCache(String, boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
saveProjectAndCacheToDirectory(String, boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
Saves the project and cache
saveProjectAndCacheToDirectory(String, boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
SaveProjectAndCacheToDirectoryRun - Class in org.hkijena.jipipe.ui.project
 
SaveProjectAndCacheToDirectoryRun(JIPipeWorkbench, JIPipeProject, Path, boolean) - Constructor for class org.hkijena.jipipe.ui.project.SaveProjectAndCacheToDirectoryRun
 
saveProjectAndCacheToZIP(String) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
Saves the project and cache
saveProjectAndCacheToZIP(String) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
SaveProjectAndCacheToZipRun - Class in org.hkijena.jipipe.ui.project
 
SaveProjectAndCacheToZipRun(JIPipeWorkbench, JIPipeProject, Path) - Constructor for class org.hkijena.jipipe.ui.project.SaveProjectAndCacheToZipRun
 
saveProjectAs(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
Saves the project
saveProjectAs(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
Saves the project
saveROIs(MetadataStore, ROIListData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIHandler
Save ROIs in the ROI manager to the given MetadataStore.
saveSingleRoi(Roi, Path) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Saves a single ROI to a file
saveToFile(Object, Path) - Static method in class org.hkijena.jipipe.utils.json.JsonUtils
 
saveToJson(Path) - Method in class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment
Saves the exported compartment to JSON
saveToRoiOrZip(Path) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Saves all ROIs in this list as *.roi or *.zip file depending on how many ROIs are stored in the list If the extension of the output file is .zip and there is one ROI in the list, the output will still be saved as zip!
saveToXLSXSheet(Sheet) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Saves the table data to an Excel sheet
saveToZip(Path) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Saves all ROIs in this list as ZIP file
scalarProduct(List<Double>, List<Double>) - Static method in class org.hkijena.jipipe.utils.VectorUtils
 
scale(double, double, boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Scales the ROI in this list and returns a new list containing the scaled instances Does not change the ROIs in this list
ScaleBarGenerator - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration
Copy of ScaleBar where extended access to parameters is given
ScaleBarGenerator(ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator
 
ScaleBarGenerator.ScaleBarConfiguration - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration
 
ScaleBarGenerator.ScaleBarPosition - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration
 
scaleHSV(Color, float, float, float) - Static method in class org.hkijena.jipipe.utils.ColorUtils
Applies scaling in HSV space
scaleImageToFit(BufferedImage, int, int) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils
 
ScaleMode - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
 
scaleProcessor(ImageProcessor, int, int, InterpolationMethod, boolean, ScaleMode, Anchor, Color) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
 
ScaleRoiAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify
Wrapper around RoiManager
ScaleRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ScaleRoiAlgorithm
Instantiates a new node type.
ScaleRoiAlgorithm(ScaleRoiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ScaleRoiAlgorithm
 
ScatterXYPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
A scatter XY plot Series table columns: X (Double), Y (Double) Multiple series: Yes
ScatterXYPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.ScatterXYPlotData
Creates a new instance
ScatterXYPlotData(ScatterXYPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.ScatterXYPlotData
Creates a copy
Scene3DData - Class in org.hkijena.jipipe.extensions.scene3d.datatypes
 
Scene3DData() - Constructor for class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
Scene3DData(Scene3DData) - Constructor for class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
Scene3DGeometry - Interface in org.hkijena.jipipe.extensions.scene3d.model
 
Scene3DGroupNode - Class in org.hkijena.jipipe.extensions.scene3d.model
 
Scene3DGroupNode() - Constructor for class org.hkijena.jipipe.extensions.scene3d.model.Scene3DGroupNode
 
Scene3DGroupNode(Scene3DGroupNode) - Constructor for class org.hkijena.jipipe.extensions.scene3d.model.Scene3DGroupNode
 
Scene3DIndexedMeshGeometry - Class in org.hkijena.jipipe.extensions.scene3d.model.geometries
 
Scene3DIndexedMeshGeometry(float[], float[], int[], int[]) - Constructor for class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DIndexedMeshGeometry
Creates a mesh object
Scene3DIndexedMeshGeometry(Scene3DIndexedMeshGeometry) - Constructor for class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DIndexedMeshGeometry
 
Scene3DLineGeometry - Class in org.hkijena.jipipe.extensions.scene3d.model.geometries
 
Scene3DLineGeometry() - Constructor for class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry
 
Scene3DLineGeometry(Scene3DLineGeometry) - Constructor for class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry
 
Scene3DLineGeometry.LineEndPoint - Class in org.hkijena.jipipe.extensions.scene3d.model.geometries
 
Scene3DMeshGeometry - Interface in org.hkijena.jipipe.extensions.scene3d.model.geometries
 
Scene3DNode - Interface in org.hkijena.jipipe.extensions.scene3d.model
A node in the 3D scene
Scene3DPlugin - Class in org.hkijena.jipipe.extensions.scene3d
 
Scene3DPlugin() - Constructor for class org.hkijena.jipipe.extensions.scene3d.Scene3DPlugin
 
Scene3DSphereGeometry - Class in org.hkijena.jipipe.extensions.scene3d.model.geometries
 
Scene3DSphereGeometry() - Constructor for class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
Scene3DSphereGeometry(Scene3DSphereGeometry) - Constructor for class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
Scene3DToColladaExporter - Class in org.hkijena.jipipe.extensions.scene3d.utils
 
Scene3DToColladaExporter(Scene3DData, Path) - Constructor for class org.hkijena.jipipe.extensions.scene3d.utils.Scene3DToColladaExporter
 
Scene3DUnindexedMeshGeometry - Class in org.hkijena.jipipe.extensions.scene3d.model.geometries
 
Scene3DUnindexedMeshGeometry(float[], float[]) - Constructor for class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DUnindexedMeshGeometry
Creates a mesh object
Scene3DUnindexedMeshGeometry(Scene3DUnindexedMeshGeometry) - Constructor for class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DUnindexedMeshGeometry
 
Scene3DUtils - Class in org.hkijena.jipipe.extensions.scene3d.utils
 
Scene3DUtils() - Constructor for class org.hkijena.jipipe.extensions.scene3d.utils.Scene3DUtils
 
schedule(Runnable) - Method in class org.hkijena.jipipe.api.JIPipeFixedThreadPool
Schedules a runnable
scheduleActivateExtension(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
scheduleBatches(List<Runnable>, int) - Method in class org.hkijena.jipipe.api.JIPipeFixedThreadPool
Schedules multiple tasks at once, split into batches.
ScheduledActivateExtensionEvent(JIPipeExtensionRegistry, String) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry.ScheduledActivateExtensionEvent
 
ScheduledActivateExtensionEventEmitter() - Constructor for class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry.ScheduledActivateExtensionEventEmitter
 
ScheduledDeactivateExtensionEvent(JIPipeExtensionRegistry, String) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry.ScheduledDeactivateExtensionEvent
 
ScheduledDeactivateExtensionEventEmitter() - Constructor for class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry.ScheduledDeactivateExtensionEventEmitter
 
scheduleDeactivateExtension(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
scheduleRegister(JIPipeNodeRegistrationTask) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Schedules registration after all dependencies of the registration task are satisfied
scheduleRegisterExample(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
 
scheduleRegisterJsonExtension(Path, JsonNode) - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionLoaderPlugin
Schedules the registration of an extension Invalid JSON data is skipped
scheduleRegisterTemplate(JIPipeNodeTemplate) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
 
scheduleUpdateLutAndCalibration() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
score - Variable in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines.HoughLine
 
ScoreParameters() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ScoreParameters
 
ScoreParameters(IterativeThresholdByROIStatistics2DAlgorithm.ScoreParameters) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ScoreParameters
 
ScreenImage - Class in org.hkijena.jipipe.utils.ui
Convenience class to create and optionally save to a file a BufferedImage of an area on the screen.
ScreenImage() - Constructor for class org.hkijena.jipipe.utils.ui.ScreenImage
 
ScreenImageSVG - Class in org.hkijena.jipipe.utils.ui
Convenience class to create and optionally save to a file a BufferedImage of an area on the screen.
ScreenImageSVG() - Constructor for class org.hkijena.jipipe.utils.ui.ScreenImageSVG
 
screenToImageCoordinate(Point, boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
Converts screen coordinates into image pixel coordinates
screenToImageSubPixelCoordinate(Point, boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
Converts screen coordinates into image pixel coordinates
ScriptParameter - Class in org.hkijena.jipipe.extensions.parameters.api.scripts
A parameter that contains some kind of script
ScriptParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameter
Creates a new empty code
ScriptParameter(ScriptParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameter
Copies the code
ScriptParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.api.scripts
Parameter editor for ScriptParameter
ScriptParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameterEditorUI
 
ScriptParameterEditorUI.ExternalEditor - Class in org.hkijena.jipipe.extensions.parameters.api.scripts
 
ScriptParameterEditorUI.ExternalFileExternalEditor - Class in org.hkijena.jipipe.extensions.parameters.api.scripts
 
ScriptParameterEditorUI.TabExternalEditor - Class in org.hkijena.jipipe.extensions.parameters.api.scripts
 
ScriptParameterEditorUI.WindowExternalEditor - Class in org.hkijena.jipipe.extensions.parameters.api.scripts
 
scrollToAlgorithm(JIPipeGraphNodeUI) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
Scrolls to the specified algorithm UI
seal() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Seals input and output
sealInput() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Seals input
sealOutput() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Seals output
SearchSettings() - Constructor for class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings.SearchSettings
 
SearchTextField - Class in org.hkijena.jipipe.ui.components.search
A JXTextField designed for searching
SearchTextField() - Constructor for class org.hkijena.jipipe.ui.components.search.SearchTextField
Creates a new instance
SearchTextFieldTableRowFilter - Class in org.hkijena.jipipe.ui.components.search
Filters string entries via a SearchTextField
SearchTextFieldTableRowFilter(SearchTextField) - Constructor for class org.hkijena.jipipe.ui.components.search.SearchTextFieldTableRowFilter
 
SECONDARY1 - Static variable in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
 
SECONDARY1 - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
SECONDARY2 - Static variable in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
 
SECONDARY2 - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
SECONDARY3 - Static variable in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
 
SECONDARY3 - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
SeededWatershedSegmentationAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment
 
SeededWatershedSegmentationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm
 
SeededWatershedSegmentationAlgorithm(SeededWatershedSegmentationAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm
 
SeedSegmentationSettings - Class in org.hkijena.jipipe.extensions.ij3d.nodes.segmentation
 
SeedSegmentationSettings() - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SeedSegmentationSettings
 
SeedSegmentationSettings(SeedSegmentationSettings) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SeedSegmentationSettings
 
SELECT_ALL_OUTPUTS - Static variable in class org.hkijena.jipipe.ui.cache.JIPipeAlgorithmCacheBrowserOutputSelectorUI
 
selectAll() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
SelectAllNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
SelectAllNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SelectAllNodeUIContextAction
 
SelectAndMoveNodeHereNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
SelectAndMoveNodeHereNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SelectAndMoveNodeHereNodeUIContextAction
 
selectBestThumbnail(Dimension) - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata
Selects the best fitting thumbnail entry with respect to the size
selectColor - Variable in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
SelectCondaEnvPythonInstaller - Class in org.hkijena.jipipe.extensions.python.installers
 
SelectCondaEnvPythonInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.python.installers.SelectCondaEnvPythonInstaller
 
SelectCondaEnvPythonInstaller.Configuration - Class in org.hkijena.jipipe.extensions.python.installers
 
selectDataSlot(JIPipeDataSlot) - Method in class org.hkijena.jipipe.ui.cache.cachetree.JIPipeCacheTreePanel
Selects a node by state and slot
SelectDataTableRowsAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms
 
SelectDataTableRowsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.SelectDataTableRowsAlgorithm
 
SelectDataTableRowsAlgorithm(SelectDataTableRowsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.SelectDataTableRowsAlgorithm
 
selectDefaultTool() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
SelectedDataTypesChangedEvent(JIPipeDataTypePicker) - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.SelectedDataTypesChangedEvent
 
SelectedDataTypesChangedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.SelectedDataTypesChangedEventEmitter
 
SelectedEvent(NodeDatabaseSearchBox, JIPipeNodeDatabaseEntry) - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox.SelectedEvent
 
SelectedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox.SelectedEventEmitter
 
SelectedInfosChangedEvent(JIPipeNodeInfoPicker) - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.SelectedInfosChangedEvent
 
SelectedInfosChangedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.SelectedInfosChangedEventEmitter
 
selectEnd() - Method in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
selectHighlight - Variable in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
SelectionContextPanel(FilamentsManagerPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D.SelectionContextPanel
 
SelectionContextPanel(FilamentsManagerPlugin3D) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D.SelectionContextPanel
 
SelectionContextPanel(SpotsManagerPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D.SelectionContextPanel
 
SelectionContextPanel(TracksManagerPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D.SelectionContextPanel
 
SelectionInfoContextPanel(FilamentsManagerPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D.SelectionInfoContextPanel
 
SelectionInfoContextPanel(FilamentsManagerPlugin3D) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D.SelectionInfoContextPanel
 
SelectionInfoContextPanel(SpotsManagerPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D.SelectionInfoContextPanel
 
SelectionInfoContextPanel(TracksManagerPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D.SelectionInfoContextPanel
 
selectionIsAlignCenter() - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
selectionIsAlignJustified() - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
selectionIsAlignLeft() - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
selectionIsAlignRight() - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
selectionIsBold() - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
selectionIsItalic() - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
selectionIsStrikeThrough() - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
selectionIsSubscript() - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
selectionIsSuperscript() - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
selectionIsUnderline() - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
selectionUpdated(ROI3DListData, List<ROI3D>) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3DInfoContextPanel
 
selectionUpdated(ROI3DListData, List<ROI3D>) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3DSelectionContextPanel
 
selectionUpdated(List<Filaments3DData>, List<Filaments3DData>) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D.SelectionContextPanel
 
selectionUpdated(List<Filaments3DData>, List<Filaments3DData>) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin2D.SelectionInfoContextPanel
 
selectionUpdated(List<Filaments3DData>, List<Filaments3DData>) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D.SelectionContextPanel
 
selectionUpdated(List<Filaments3DData>, List<Filaments3DData>) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D.SelectionInfoContextPanel
 
selectionUpdated(SpotsCollectionData, List<Spot>) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D.SelectionContextPanel
 
selectionUpdated(SpotsCollectionData, List<Spot>) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D.SelectionInfoContextPanel
 
selectionUpdated(TrackCollectionData, List<Integer>) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D.SelectionContextPanel
 
selectionUpdated(TrackCollectionData, List<Integer>) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D.SelectionInfoContextPanel
 
selectionUpdated(ROIListData, List<Roi>) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2DInfoContextPanel
 
selectionUpdated(ROIListData, List<Roi>) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2DSelectionContextPanel
 
selectItem(T) - Method in class org.hkijena.jipipe.ui.documentation.JIPipeCompendiumUI
Displays the documentation of the specified algorithm
selectMulti(Component, FileChooserSettings.LastDirectoryKey, String, PathIOMode, PathType) - Static method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
Generic open method for multiple paths.
selectNode(String) - Method in class org.hkijena.jipipe.ui.settings.JIPipeApplicationSettingsUI
 
selectOnly(JIPipeGraphNodeUI) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
Selects only the specified algorithm
selectOnly(JIPipeGraphNodeUI) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
Selects only the specified algorithm
selectOutput(String) - Method in class org.hkijena.jipipe.ui.cache.JIPipeAlgorithmCacheBrowserOutputSelectorUI
Selects an output
selectSingle(Component, FileChooserSettings.LastDirectoryKey, String, PathIOMode, PathType, FileNameExtensionFilter...) - Static method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
Generic open/save method for single paths
selectSingletonTab(String) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Re-opens or selects a singleton tab
SelectSystemPythonInstaller - Class in org.hkijena.jipipe.extensions.python.installers
 
SelectSystemPythonInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.python.installers.SelectSystemPythonInstaller
 
SelectSystemPythonInstaller.Configuration - Class in org.hkijena.jipipe.extensions.python.installers
 
selectTask(String) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon
 
selectTool(JIPipeGraphEditorTool) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
SelectVirtualEnvPythonInstaller - Class in org.hkijena.jipipe.extensions.python.installers
 
SelectVirtualEnvPythonInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.python.installers.SelectVirtualEnvPythonInstaller
 
SelectVirtualEnvPythonInstaller.Configuration - Class in org.hkijena.jipipe.extensions.python.installers
 
sendSelectionToBackground(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
sendSelectionToForeground(Set<JIPipeGraphNodeUI>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
sendStatusBarText(String) - Method in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmWindow
 
sendStatusBarText(String) - Method in class org.hkijena.jipipe.ui.ijupdater.MissingRegistrationUpdateSiteResolver
 
sendStatusBarText(String) - Method in class org.hkijena.jipipe.ui.JIPipeDummyWorkbench
 
sendStatusBarText(String) - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWorkbench
Sends a text to the status bar
sendStatusBarText(String) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
Sends a text to the status bar
sendStatusBarText(String) - Method in interface org.hkijena.jipipe.ui.JIPipeWorkbench
Sends a text to the status bar
SendToBackgroundUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
SendToBackgroundUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SendToBackgroundUIContextAction
 
SendToForegroundUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
SendToForegroundUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SendToForegroundUIContextAction
 
sendTrayNotification(String, String, TrayIcon.MessageType) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
SeparateLabelsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels
 
SeparateLabelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.SeparateLabelsAlgorithm
 
SeparateLabelsAlgorithm(SeparateLabelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.SeparateLabelsAlgorithm
 
SEPARATOR - Static variable in interface org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeUIContextAction
Indicates that a separator is created
SequenceFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
SequenceFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.SequenceFunction
 
SerializationUtils - Class in org.hkijena.jipipe.utils
Utils for serializing objects
SerializationUtils() - Constructor for class org.hkijena.jipipe.utils.SerializationUtils
 
serialize(JIPipeExportedCompartment, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment.Serializer
 
serialize(JIPipeDataInfo, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo.Serializer
 
serialize(JIPipeDataSlotInfo, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Serializer
 
serialize(JIPipeSlotConfiguration, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.data.JIPipeSlotConfiguration.Serializer
 
serialize(JIPipeSerializedParameterCollectionData, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData.Serializer
 
serialize(EasyInstallExternalEnvironmentInstallerPackage, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage.Serializer
 
serialize(NodeGroupContents, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents.Serializer
 
serialize(JIPipeProject, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.JIPipeProject.Serializer
 
serialize(JIPipeEmptyNodeInfo, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo.Serializer
 
serialize(JIPipeJavaNodeInfo, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo.Serializer
 
serialize(JIPipeGraph, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph.Serializer
 
serialize(JIPipeGraphNode, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.Serializer
 
serialize(FormData, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.FormData.Serializer
 
serialize(Filaments3DData, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDataSerializer
 
serialize(WekaClassifierParameter, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.WekaClassifierParameter.Serializer
 
serialize(ParametersData, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.multiparameters.datatypes.ParametersData.Serializer
 
serialize(ListParameter<?>, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameter.Serializer
 
serialize(FunctionParameter<?, ?, ?>, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter.Serializer
 
serialize(Matrix2D<?>, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D.Serializer
 
serialize(OptionalParameter<?>, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameter.Serializer
 
serialize(PairParameter<?, ?>, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameter.Serializer
 
serialize(PasswordParameter, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.library.auth.PasswordParameter.Serializer
 
serialize(ParameterCollectionList, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionList.Serializer
 
serialize(Color, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.library.colors.ColorSerializer
 
serialize(ImageParameter, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.library.images.ImageParameter.Serializer
 
serialize(DynamicCategoryEnumParameter, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicCategoryEnumParameter.Serializer
 
serialize(DynamicDataDisplayOperationIdEnumParameter, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter.Serializer
 
serialize(DynamicDataImportOperationIdEnumParameter, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter.Serializer
 
serialize(HTMLText, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.library.markup.HTMLText.Serializer
 
serialize(DynamicStringEnumParameter, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.DynamicStringEnumParameter.Serializer
 
serialize(FontFamilyParameter, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.FontFamilyParameter.Serializer
 
serialize(IconRef, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.IconRef.Serializer
 
serialize(ImageJDataExporterRef, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExporterRef.Serializer
 
serialize(ImageJDataImporterRef, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImporterRef.Serializer
 
serialize(JIPipeDataInfoRef, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRef.Serializer
 
serialize(JIPipeNodeInfoRef, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeNodeInfoRef.Serializer
 
serialize(JIPipeParameterTypeInfoRef, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeParameterTypeInfoRef.Serializer
 
serialize(Rectangle, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.RectangleSerializer
 
serialize(ParameterTable, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.Serializer
 
serialize(PlotData, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData.Serializer
 
serialize(PlotDataSeries, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotDataSeries.Serializer
 
serialize(ResultsTableData, JsonGenerator, SerializerProvider) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.Serializer
 
serializeParametersToJson(JIPipeParameterCollection, JsonGenerator) - Static method in class org.hkijena.jipipe.utils.ParameterUtils
Serializes parameters to JSON using a generator
serializeParametersToJson(JIPipeParameterCollection, JsonGenerator, Predicate<Map.Entry<String, JIPipeParameterAccess>>) - Static method in class org.hkijena.jipipe.utils.ParameterUtils
Serializes parameters to JSON using a generator
Serializer() - Constructor for class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataInfo.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.api.data.JIPipeSlotConfiguration.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.api.data.utils.JIPipeSerializedParameterCollectionData.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.api.JIPipeProject.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.api.nodes.infos.JIPipeEmptyNodeInfo.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.api.nodes.infos.JIPipeJavaNodeInfo.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraph.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeGraphNode.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.FormData.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.WekaClassifierParameter.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.multiparameters.datatypes.ParametersData.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameter.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameter.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameter.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.auth.PasswordParameter.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionList.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.images.ImageParameter.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicCategoryEnumParameter.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.markup.HTMLText.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.DynamicStringEnumParameter.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.FontFamilyParameter.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.IconRef.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExporterRef.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImporterRef.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRef.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeNodeInfoRef.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeParameterTypeInfoRef.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.PlotData.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.PlotDataSeries.Serializer
 
Serializer() - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.Serializer
 
ServiceImageJ2ModuleIO - Class in org.hkijena.jipipe.extensions.imagej2.io
Dummy IO for service parameters
ServiceImageJ2ModuleIO() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.ServiceImageJ2ModuleIO
 
set(int, JIPipeDataTableMetadataRow) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
set(T) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceAccess
 
set(T) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
 
set(T) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMultiParameterAccess
 
set(T) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
set(T) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Sets the parameter value
set(T) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
set(String, Object) - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionVariablesMap
Sets a variable value.
set(U) - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameterItemParameterAccess
 
set(T) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterInputAccess
 
set(T) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterOutputAccess
 
set(T) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameterParameterAccess
 
set(U) - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameterContentAccess
 
set(T) - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterKeyAccess
 
set(T) - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameterValueAccess
 
set(T) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTableCellAccess
 
set(int, Scene3DNode) - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
set(String, Object) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.RowBuilder
 
set(int, Object) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.RowBuilder
 
set3DFeatures(WekaSegmentation, Set<WekaFeature3D>) - Static method in class org.hkijena.jipipe.extensions.ijweka.WekaUtils
Reliably sets the 3D features
setAbove(boolean) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeatureFilterParameter
 
setAbove(boolean) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeatureFilterParameter
 
setAbsoluteCoordinates(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.Warp2DAlgorithm
 
setAcceptedDataType(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Sets the accepted slot type Please note that this method can cause issues when running the graph
setAcceptedDataTypeId(String) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
Sets the accepted datatype ID
setAccessAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ModifyPath
 
setAccessor(OMEAccessorParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm.Entry
 
setAccessor(OMEAccessorParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm.Entry
 
setAccessorId(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OMEAccessorParameter
 
setAccessPixels(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm
 
setAccessPixels(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm
 
setAccessPixels(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm
 
setAccessPixels(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm
 
setAccessPixels(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm
 
setAccessPixels(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm
 
setAccumulationFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
setAccumulatorThreshold(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.LinesHoughDetection2DAlgorithm
 
setAcknowledgements(JIPipeAuthorMetadata.List) - Method in class org.hkijena.jipipe.api.JIPipeMetadata
Sets the list of acknowledged authors
setAction(Consumer<JIPipeWorkbench>) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction
 
setActions(List<JIPipeNotificationAction>) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
setActions(List<JIPipeParameterCollectionContextAction>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
setActions(List<Ribbon.Action>) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Band
 
setActivate(boolean) - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters
 
setActivate(OptionalBooleanParameter) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
setActivatedExtensions(Set<String>) - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry.Settings
 
setAddableAlgorithms(Set<JIPipeNodeInfo>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
setAddAcknowledgements(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
setAddAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.CountROIAlgorithm
 
setAddAsAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableByColumnsAlgorithm
 
setAddAuthors(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
setAddBorder(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm
 
setAddCitation(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
setAddContextActionsToContextMenu(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
setAddDataToString(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ConvertToAnnotationTable
 
setAddDependencies(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
setAddDependencyCitations(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
setAddDescription(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
setAddFileExtension(boolean) - Method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
 
setAdditionalCitations(List<String>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
 
setAdditionalCitations(List<String>) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
setAdditionalData(JsonNode) - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
setAdditionalFiles(List<Path>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail
 
setAdditionalMetadata(Map<String, Object>) - Method in class org.hkijena.jipipe.api.JIPipeProject
 
setAdditionalMetadata(Map<String, Object>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
setAdditionalUIVariables(Set<JIPipeExpressionParameterVariableInfo>) - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionParameter
 
setAddLastIdentityField(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm
 
setAddLastIdentityField(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm
 
setAddLastIdentityField(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm
 
setAddLicence(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
setAddListOfUsedNodes(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
setAddNameToTable(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm
 
setAddPipelineTextDescription(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
setAddSummary(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
setAddTitle(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
setAddWebsite(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectReportUI.ReportSettings
 
setAffiliations(StringList) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
setAliases(List<JIPipeNodeMenuLocation>) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
setAllChannels(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeChannelSettings
 
setAllowCache(boolean) - Method in class org.hkijena.jipipe.extensions.settings.RuntimeSettings
 
setAllowDefaultCollapsedParameters(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
setAllowedInputSlotTypes(Set<Class<? extends JIPipeData>>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
setAllowedOutputSlotTypes(Set<Class<? extends JIPipeData>>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
setAllowedTypes(Set<Class<?>>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Sets allowed parameter types
setAllowedValues(List<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicEnumParameter
 
setAllowedValues(Set<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameter
 
setAllowedValues(List<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameter
 
setAllowExisting(boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox
 
setAllowMerging(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings
 
setAllowNew(boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox
 
setAllowSkipAlgorithmsWithoutInput(boolean) - Method in class org.hkijena.jipipe.extensions.settings.RuntimeSettings
 
setAllowUserModification(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Enabled/disables if modification by users is allowed
setAlpha(double) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.EdgeFilter3DAlgorithm
 
setAlpha(double) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.SymmetryFilter3DAlgorithm
 
setAlpha(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures
 
setAlpha(BufferedImage, BufferedImage) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils
 
setAlpha(Color, int) - Static method in class org.hkijena.jipipe.utils.ColorUtils
 
setAlwaysExportCompartmentOutputs(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings
 
setAnchor(Anchor) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters
 
setAnchor(Anchor) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
setAnchor(TableToRectangularROIAlgorithm.Anchor) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
setAnchor(Anchor) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.CanvasEqualizer
 
setAnchor(Anchor) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm
 
setAnchor(Anchor) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm
 
setAnchor(Anchor) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm
 
setAnchor(Anchor) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
 
setAnchor(Anchor) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
 
setAnchor(Anchor) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
setAngle(int) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ArrowAnnotationGraphNode
 
setAngle(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
setAngle(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RotateRoiAlgorithm
 
setAngle(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm
 
setAnisotropy(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationTweaksSettings
 
setAnisotropy(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationEnhancementSettings_Old
Deprecated.
 
setAnisotropy(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationTweaksSettings
 
setAnnotateC(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
setAnnotateC(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm
 
setAnnotateT(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
setAnnotateT(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm
 
setAnnotateWithChannelIndex(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsAlgorithm
Deprecated.
 
setAnnotateWithCurrentData(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractDataAnnotation
 
setAnnotateWithSlotName(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsAlgorithm
Deprecated.
 
setAnnotateWithValues(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableIntoRowsAlgorithm
 
setAnnotateZ(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
setAnnotateZ(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm
 
setAnnotationBoundingHeight(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
setAnnotationBoundingWidth(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
setAnnotationC(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm
 
setAnnotationC(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm
 
setAnnotationC(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
setAnnotationCLocation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
setAnnotationColumnChannelIndex(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsAlgorithm
Deprecated.
 
setAnnotationColumnFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
setAnnotationColumnSlotName(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsAlgorithm
Deprecated.
 
setAnnotationExpression(AnnotationQueryExpression) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveAnnotationAlgorithm
 
setAnnotationExpression(AnnotationQueryExpression) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotationToPath
 
setAnnotationFilter(AnnotationQueryExpression) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SimplifyAnnotationsAlgorithm
 
setAnnotationGenerator(NamedTextAnnotationGeneratorExpression.List) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertTracksToRoiNode
 
setAnnotationGenerator(NamedTextAnnotationGeneratorExpression.List) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SplitSpotsNode
 
setAnnotationGenerator(NamedTextAnnotationGeneratorExpression.List) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.SplitTracksNode
 
setAnnotationId(long) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROAnnotationReferenceData
 
setAnnotationIndex(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm
 
setAnnotationMap(Multimap<Class<? extends Annotation>, Annotation>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
setAnnotationMatchingMethod(JIPipeTextAnnotationMatchingMethod) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
setAnnotationMatchingMethod(JIPipeTextAnnotationMatchingMethod) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
setAnnotationMatchingMethod(JIPipeTextAnnotationMatchingMethod) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
setAnnotationMatchingMethod(JIPipeTextAnnotationMatchingMethod) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm
 
setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm
 
setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm
 
setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm
 
setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.AnnotateWithJsonDataAlgorithm
 
setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.AnnotateWithTextDataAlgorithm
 
setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.AnnotateWithXPathDataAlgorithm
 
setAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateDataWithTableValues
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithmIterationStepGenerationSettings
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByExpression
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithData
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithDataString
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithSourceSlot
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.DataAnnotationToStringAnnotation
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractAndReplaceAnnotation
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.GenerateRandomUniqueAnnotation
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.GenerateUniqueAnnotation
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RenameAnnotation
 
setAnnotationMergeStrategy(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RenameDataAnnotation
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.SimplePathAnnotationGenerator
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.forms.utils.SingleAnnotationIOSettings
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.ParametersToAnnotationsAlgorithm
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingPythonScriptAlgorithm
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingPythonScriptAlgorithm
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.python.algorithms.PythonScriptAlgorithm
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.r.algorithms.IteratingRScriptAlgorithm
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.r.algorithms.MergingRScriptAlgorithm
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm
 
setAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnsToAnnotationsAlgorithm
 
setAnnotationName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByProjectPaths.Entry
 
setAnnotationName(String) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithData
 
setAnnotationName(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SetSingleAnnotation
 
setAnnotationName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm.Entry
 
setAnnotationName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.omero.parameters.OMEROKeyValuePairToAnnotationImporter
 
setAnnotationName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.AnnotateWithJsonDataAlgorithm.Entry
 
setAnnotationName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.AnnotateWithTextDataAlgorithm.Entry
 
setAnnotationName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.AnnotateWithXPathDataAlgorithm.Entry
 
setAnnotationName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateDataWithTableValues.AnnotationSettings
 
setAnnotationNameFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveArrayAnnotationsAlgorithm
 
setAnnotationNameFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveNAAnnotationColumnsAlgorithm
 
setAnnotationNameFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AddAnnotationColumnsAlgorithm
 
setAnnotationNameQuery(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractDataAnnotation
 
setAnnotationPrefix(String) - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AddAnnotationColumnsAlgorithm
 
setAnnotationRemovalMode(SimplifyAnnotationsAlgorithm.AnnotationRemovalMode) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SimplifyAnnotationsAlgorithm
 
setAnnotations(List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadataRow
Compatibility function to allow reading tables in an older format
setAnnotations(NamedTextAnnotationGeneratorExpression.List) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByExpression
 
setAnnotations(StringAndStringPairParameter.List) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataRowFolder
 
setAnnotations(ExpressionTableColumnGeneratorProcessorParameterList) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnnotateByImageStatisticsExpressionAlgorithm
 
setAnnotationsFromPython(PyDictionary, Map<String, JIPipeTextAnnotation>) - Static method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
Sets annotations from a Python dictionary
setAnnotationSupplier(Function<Class<? extends Annotation>, Annotation>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
 
setAnnotationSupplier(Function<Class<? extends Annotation>, Annotation>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
 
setAnnotationT(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm
 
setAnnotationT(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm
 
setAnnotationT(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
setAnnotationTLocation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
setAnnotationType(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
setAnnotationType(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm
 
setAnnotationValue(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByProjectPaths.Entry
 
setAnnotationValue(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SetSingleAnnotation
 
setAnnotationValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.ExplodeRoi3DListAlgorithm
 
setAnnotationValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.split.ExplodeRoiAlgorithm
 
setAnnotationValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.omero.parameters.OMEROKeyValuePairToAnnotationImporter
 
setAnnotationValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateDataWithTableValues.AnnotationSettings
 
setAnnotationX(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm
 
setAnnotationX(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
setAnnotationXLocation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
setAnnotationY(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm
 
setAnnotationY(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
setAnnotationYLocation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
setAnnotationZ(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm
 
setAnnotationZ(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm
 
setAnnotationZ(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
setAnnotationZLocation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
setAntialiased(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
setAppend(boolean) - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters
 
setAppend(OptionalBooleanParameter) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
setAppend(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ApplyExpressionToColumnsAlgorithm
 
setAppend(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ConvertColumnsAlgorithm
 
setAppendDirectoryNameToTarget(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.CopyPath
 
setApplyDespeckle(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
setApplyDilation(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologicalReconstruction2DAlgorithm
 
setApplyDilation(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologicalReconstruction3DAlgorithm
 
setApplyFirstCLAHE(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
setApplyGaussian(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
setApplyInternalGradient(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
setApplyMerging(boolean) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
setApplyPerChannel(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm
 
setApplyPerChannel(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm
 
setApplyPerChannel(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm
 
setApplyPerChannel(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiCalculatorAlgorithm
 
setApplyPerFrame(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm
 
setApplyPerFrame(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm
 
setApplyPerFrame(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm
 
setApplyPerFrame(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiCalculatorAlgorithm
 
setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm
 
setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm
 
setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConditionalInverterAlgorithm
 
setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ImageToTableAlgorithm
 
setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm
 
setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiCalculatorAlgorithm
 
setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm
 
setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm
 
setApplyPerSlice(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.HistogramGenerator
 
setApplySecondCLAHE(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
setApplyTiling(boolean) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling2DSettings
 
setApplyTiling(boolean) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling3DSettings
 
setApplyToAllPlanes(boolean) - Method in class org.hkijena.jipipe.extensions.clij2.CLIJSettings.ContrastEnhancerSettings
 
setApplyToAllPlanes(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.LUTInverterAlgorithm
 
setArcHeight(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm
 
setArcWidth(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm
 
setArguments(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
setArguments(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.python.PythonEnvironment
 
setArguments(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.r.REnvironment
 
setArguments(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.settings.DownloadSettings.DownloadEnvironment
 
setArrowSize(int) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ArrowAnnotationGraphNode
 
setArtifactPaint(Paint) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Sets the paint used to color the median and average markers and sends a RendererChangeEvent to all registered listeners.
setAsActiveViewerPanel() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
setAskOnDeleteCompartment(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setAskOnDeleteNode(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setAskOnDeleteParameter(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setAssembleTemplates(boolean) - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
setAssembleTemplatesBackground(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
setAssembleTemplatesOutput(OptionalDataInfoRefParameter) - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
setAttachments(Map<Class<?>, Object>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Sets the attachments map Warning: Attachments are not serialized
setAttachOnlyNonDefaultParameterAnnotations(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings
 
setAttachOnlyNonDefaultParameterAnnotations(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
setAttachParameterAnnotations(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings
 
setAttachParameterAnnotations(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
setAttitudeExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm
 
setAttribute(GrayscaleAttributeFiltering2DAlgorithm.Attribute) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm
 
setAttribute(GrayscaleAttributeFiltering3DAlgorithm.Attribute) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm
 
setAugment(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationEnhancementSettings_Old
Deprecated.
 
setAuthors(JIPipeAuthorMetadata.List) - Method in class org.hkijena.jipipe.api.JIPipeMetadata
Sets the authors
setAutoCalibrateAfterPulling(boolean) - Method in class org.hkijena.jipipe.extensions.clij2.CLIJSettings
 
setAutoClamp(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.SliceROIListAlgorithm
 
setAutoClamp(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm
Deprecated.
 
setAutoClamp(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2
 
setAutoHideEdgeDistanceThreshold(int) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setAutoHideEdgeOverlapThreshold(double) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setAutoLabelOutputWithFileName(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.FilesystemExtensionSettings
 
setAutoLayout(GraphAutoLayout) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setAutoLayoutMovesOtherNodes(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setAutoMuteBySelection(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setAutoMuteEdges(boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
setAutoMuteEdgesEnabled(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setAutoRemoveOutdatedCachedData(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
setAutoSaveDelay(int) - Method in class org.hkijena.jipipe.extensions.settings.BackupSettings
 
setAutoSaveLastDisplay(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
setAutoSaveLastImporter(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
setAutoScale(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
setAutoScale(boolean) - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
setAutoSwitch2D3DViewer(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewerGeneralUISettings
 
setAutoThresholdMethod(AutoThresholder.Method) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.NucleiSegmentation3DAlgorithm
 
setAvailableItems(List<T>) - Method in class org.hkijena.jipipe.ui.components.pickers.PickerDialog
 
setAvailableParameters(Map<String, JIPipeParameterAccess>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionVisibilities
Sets the list of available parameters
setAvailableTypes(Set<JIPipeDataInfo>) - Method in class org.hkijena.jipipe.ui.components.AddAlgorithmSlotPanel
 
setAviCompression(AVICompression) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImage2Algorithm
 
setAviCompression(AVICompression) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
setAviCompression(AVICompression) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm
 
setAvoidGPUMemory(boolean) - Method in class org.hkijena.jipipe.extensions.clij2.CLIJCommandNode
 
setAvoidLabelOnImage(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelParameters
 
setAvoidScaling(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.ImageParameters
 
setAvoidUnnecessaryScaling(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
 
setAxes(String) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.ExportIlastikHDF5ImageAlgorithm
 
setAxes(String) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.ImportIlastikHDF5ImageAlgorithm
 
setAzimuthExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm
 
setBackground(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
 
setBackgroundColor(Color) - Method in class org.hkijena.jipipe.extensions.core.nodes.JIPipeCommentNode
 
setBackgroundColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
setBackgroundColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
setBackgroundColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
setBackgroundColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToRGBAlgorithm
 
setBackgroundColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
setBackgroundColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
setBackgroundColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
setBackgroundColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.CanvasEqualizer
 
setBackgroundColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm
 
setBackgroundColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm
 
setBackgroundColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm
 
setBackgroundColor(Color) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
setBackgroundImage(BufferedImage) - Method in class org.hkijena.jipipe.ui.components.ImageFrame
 
setBackgroundType(RollingBallBackgroundEstimator2DAlgorithm.BackgroundType) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm
 
setBackgroundValue(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ApplyDistanceTransform2DAlgorithm
 
setBackupItemList(List<JIPipeProjectBackupItem>) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItemCollection
 
setBackupTime(LocalDateTime) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItem
 
setBalanceClasses(boolean) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.WekaClassifierSettings
 
setBands(List<Ribbon.Band>) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Task
 
setBandwidth(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
setBarColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
setBarColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
setBarColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
setBarThickness(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
setBarThickness(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
setBarThicknessInPixels(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Sets the current work directory of this algorithm.
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ModifyAnnotationScript
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SplitByAnnotationScript
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelIterating
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelSimpleIterating
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileDataSource
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileListDataSource
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderDataSource
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderListDataSource
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathDataSource
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathListDataSource
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.MacroWrapperAlgorithm
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsScriptAlgorithm
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge.FilterAndMergeRoiByStatisticsScriptAlgorithm
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingJythonScriptAlgorithm
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingPythonScriptAlgorithm
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.python.algorithms.JythonScriptAlgorithm
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingJythonScriptAlgorithm
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingPythonScriptAlgorithm
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.python.algorithms.PythonScriptAlgorithm
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.python.algorithms.SimpleIteratingJythonScriptAlgorithm
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.r.algorithms.IteratingRScriptAlgorithm
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.r.algorithms.MergingRScriptAlgorithm
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.tables.nodes.ModifyAndMergeTablesScript
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.tables.nodes.ModifyTablesScript
 
setBaseDirectory(Path) - Method in class org.hkijena.jipipe.extensions.tables.nodes.TablesFromScript
 
setBaseName(String) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.GenerateUniqueAnnotation
 
setBaseName(String) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.TemporaryFolderDataSource
 
setBatchGenerationSettings(JIPipeMergingAlgorithmIterationStepGenerationSettings) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
setBatchSize(int) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
setBatchSize(int) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeTrainingTweaksSettings
 
setBatchSize(int) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationPerformanceSettings_Old
Deprecated.
 
setBatchSize(int) - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeTrainingTweaksSettings
 
setBinarize(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.Voronoi2DAlgorithm
 
setBinAxisFontSize(int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
setBinAxisLabel(String) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
setBinAxisMaximum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
setBinAxisMinimum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
setBins(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer
 
setBins(int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
setBioFormatsCompression(OMETIFFCompression) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesSettings
 
SetBioFormatsExporterSettings - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms
 
SetBioFormatsExporterSettings(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.SetBioFormatsExporterSettings
 
SetBioFormatsExporterSettings(SetBioFormatsExporterSettings) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.SetBioFormatsExporterSettings
 
setBitDepthAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
setBlackBackground(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
setBlackBackground(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
setBlackBackground(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.FindHoles2DAlgorithm
 
setBlackBackground(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyFillHoles2DAlgorithm
 
setBlackToAlpha(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel
Deprecated.
 
setBlendMode(ImageBlendMode) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
setBlendMode(ImageBlendMode) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageBlendLayer
 
setBlockedNotifications(StringList) - Method in class org.hkijena.jipipe.extensions.settings.NotificationUISettings
 
setBlockRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer
 
setBlockRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm
 
setBlockRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm
 
setBlockRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm
 
setBlueThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
setBlueYellowThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
setBookmarked(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
 
setBookmarks(FileChooserBookmarkList) - Method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
 
setBorder(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.CropLabelsAlgorithm
 
setBorderColor(Color) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
setBorderColor(Color) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
setBorderColor(Color) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.TextBoxAnnotationGraphNode.ShapeParameters
 
setBorderColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelColorMapIcon
 
setBorderColor(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm
 
setBorderColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.CanvasParameters
 
setBorderColor(Color) - Method in class org.hkijena.jipipe.extensions.parameters.library.colors.ColorMapIcon
 
setBorderColor(Color) - Method in interface org.hkijena.jipipe.ui.components.icons.ColorIcon
 
setBorderColor(Color) - Method in class org.hkijena.jipipe.ui.components.icons.OverlayColorIcon
 
setBorderColor(Color) - Method in class org.hkijena.jipipe.ui.components.icons.SolidColorIcon
 
setBorderDefinition(Margin) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.RemoveBorderRoisAlgorithm
 
setBorderDistance(double) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm
 
setBorderDistance(double) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.RemoveBorderFilaments
 
setBorderMode(BorderMode) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling2DSettings
 
setBorderMode(BorderMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm
 
setBorderMode(BorderMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
setBorderMode(BorderMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
setBorderSize(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.CanvasParameters
 
setBorderThickness(int) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
setBorderThickness(int) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.TextBoxAnnotationGraphNode.ShapeParameters
 
setBorderWidth(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
setBorderWidth(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.MontageToStackAlgorithm
 
setBorderWidth(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
setBottom(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
 
setBottom(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.InnerMargin
 
setBottom(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
setBottomIcon(ImageIcon) - Method in class org.hkijena.jipipe.ui.components.icons.AnimatedIcon
 
setBoundary(OutOfBoundsMirrorFactory.Boundary) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.MirrorImageJ2OutOfBoundsFactoryData
 
setBrightnessThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
setBuffered(boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
setC(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
 
setC(TIntList) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndices
 
setCalibrationMode(ImageJCalibrationMode) - Method in class org.hkijena.jipipe.extensions.clij2.CLIJSettings.ContrastEnhancerSettings
 
setCalibrationMode(ImageJCalibrationMode) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm
 
setCalibrationMode(ImageJCalibrationMode) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.CalibrationParameters
 
setCancelled(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.BeforeAddParameterEvent
 
setCanvas(JIPipeGraphCanvasUI) - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.dragdrop.JIPipeCreateNodesFromDraggedDataDragAndDropBehavior
 
setCanvas(JIPipeGraphCanvasUI) - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.dragdrop.JIPipeCompartmentGraphDragAndDropBehavior
 
setCanvas(JIPipeGraphCanvasUI) - Method in interface org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphDragAndDropBehavior
Sets the canvas that contains the algorithm nodes
setCanvasAnchor(Anchor) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.CanvasParameters
 
setCanvasBackgroundColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.CanvasParameters
 
setCategories(PluginCategoriesEnumParameter.List) - Method in class org.hkijena.jipipe.api.JIPipeMetadata
 
setCategory(JIPipeNodeTypeCategory) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
Sets the category
setCategoryAxisFontSize(int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CategoryPlotData
 
setCategoryAxisLabel(String) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CategoryPlotData
 
setCategoryColumns(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.UnMeltTableAlgorithm
 
setCategoryParameter(DynamicCategoryEnumParameter) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
setcAxis(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm
 
setCellProbabilityThreshold(double) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationThresholdSettings
 
setCellProbabilityThreshold(double) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationThresholdSettings_Old
Deprecated.
 
setCellRenderer(ListCellRenderer<? super T>) - Method in class org.hkijena.jipipe.ui.components.pickers.PickerDialog
 
setCenter(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawOvalRoiAlgorithm
 
setCenter(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm
 
setCenter(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
setCenter(boolean) - Method in class org.hkijena.jipipe.ui.components.ImageFrame
 
setCenterScale(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
setCenterScale(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
setCenterScale(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
setCenterScale(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ScaleRoiAlgorithm
 
setCenterScale(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
setCenterX(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
setCenterX(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
setCenterX(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RotateRoiAlgorithm
 
setCenterX(float) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
setCenterY(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
setCenterY(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
setCenterY(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RotateRoiAlgorithm
 
setCenterY(float) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
setCenterZ(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
setCenterZ(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
setCenterZ(float) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
setCentroidC(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
setCentroidT(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
setCentroidX(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
setCentroidY(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
setCentroidZ(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
setChamferWeights(ChamferWeights) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap2DAlgorithm
 
setChamferWeights(ChamferWeights3D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap3DAlgorithm
 
setChamferWeights(ChamferWeights) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.GeodesicDistanceMap2DAlgorithm
 
setChamferWeights(ChamferWeights3D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.LabelChamferDistanceMap3DAlgorithm
 
setChannel(int) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
setChannel(int) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.NonSpatialPoint3d
 
setChannel1Name(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
setChannel2Name(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
setChannelColumnFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
setChannelIndexAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm
 
setChannelIndexAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
setChannelLocation(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
setChannelLocation(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
setChannelLUT(ImagePlus, LUT[]) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
setChannelName(String) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerLUTEditor
 
setChannelName(String) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerOpacityLUTEditor
 
setChannelNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm
 
setChannelNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
setChannelNames(String, String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.CustomColoc2
 
setChannelReordering(IntegerAndIntegerPairParameter.List) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm
 
setChannelSizeAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
setCheckerboardColor1(Color) - Method in class org.hkijena.jipipe.extensions.imp.nodes.ConvertImpImageToImagePlusAlgorithm
 
setCheckerboardColor2(Color) - Method in class org.hkijena.jipipe.extensions.imp.nodes.ConvertImpImageToImagePlusAlgorithm
 
setCheckerboardSize(int) - Method in class org.hkijena.jipipe.extensions.imp.nodes.ConvertImpImageToImagePlusAlgorithm
 
setCheckForUpdates(boolean) - Method in class org.hkijena.jipipe.extensions.python.adapter.PythonAdapterExtensionSettings
 
setChildren(BiMap<String, JIPipeParameterTree.Node>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
setChildren(List<Scene3DNode>) - Method in class org.hkijena.jipipe.extensions.scene3d.model.Scene3DGroupNode
 
setCitation(String) - Method in class org.hkijena.jipipe.api.JIPipeMetadata
Sets the citation
setClass0CountColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
setClass0MeanColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
setClass0SumColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
setClass1CountColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
setClass1MeanColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
setClass1SumColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
setClassifier(Classifier) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.WekaClassifierParameter
 
setClassifier(WekaClassifierParameter) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.WekaClassifierSettings
 
setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm
 
setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingPythonScriptAlgorithm
 
setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingPythonScriptAlgorithm
 
setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.python.algorithms.PythonScriptAlgorithm
 
setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.r.algorithms.IteratingRScriptAlgorithm
 
setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.r.algorithms.MergingRScriptAlgorithm
 
setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessIteratingAlgorithm
 
setCleanUpAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessMergingAlgorithm
 
setClearBeforeWrite(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.SetROI3DMetadataFromTableAlgorithm
 
setClearBeforeWrite(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.SetImageMetadataFromTableAlgorithm
 
setClearBeforeWrite(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm
 
setClearBeforeWrite(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetROIMetadataFromTableAlgorithm
 
setCluster(boolean) - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationTweaksSettings
 
setCode(PythonScript) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ModifyAnnotationScript
 
setCode(PythonScript) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SplitByAnnotationScript
 
setCode(ImageJMacro) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.MacroWrapperAlgorithm
 
setCode(PythonScript) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsScriptAlgorithm
 
setCode(PythonScript) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.merge.FilterAndMergeRoiByStatisticsScriptAlgorithm
 
setCode(String) - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameter
 
setCode(PythonScript) - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingJythonScriptAlgorithm
 
setCode(PythonScript) - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingPythonScriptAlgorithm
 
setCode(PythonScript) - Method in class org.hkijena.jipipe.extensions.python.algorithms.JythonScriptAlgorithm
 
setCode(PythonScript) - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingJythonScriptAlgorithm
 
setCode(PythonScript) - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingPythonScriptAlgorithm
 
setCode(PythonScript) - Method in class org.hkijena.jipipe.extensions.python.algorithms.PythonScriptAlgorithm
 
setCode(PythonScript) - Method in class org.hkijena.jipipe.extensions.python.algorithms.SimpleIteratingJythonScriptAlgorithm
 
setCode(PythonScript) - Method in class org.hkijena.jipipe.extensions.tables.nodes.ModifyAndMergeTablesScript
 
setCode(PythonScript) - Method in class org.hkijena.jipipe.extensions.tables.nodes.ModifyTablesScript
 
setCode(PythonScript) - Method in class org.hkijena.jipipe.extensions.tables.nodes.TablesFromScript
 
setCollapsed(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
setCollapsed(boolean) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameter
 
setCollapsed(boolean) - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameter
 
setCollection(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
setColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
setColor(Color) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters
 
setColor(Color) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ArrowAnnotationGraphNode
 
setColor(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentEdgePropertiesAlgorithm
 
setColor(Color) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentEdge
 
setColor(Color) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
setColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel
Deprecated.
 
setColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SetToColorAlgorithm
 
setColor(Color) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DIndexedMeshGeometry
 
setColor(Color) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry
 
setColor(Color) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
setColor(Color) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DUnindexedMeshGeometry
 
setColor(Color) - Method in interface org.hkijena.jipipe.extensions.scene3d.model.Scene3DGeometry
Sets the color of this geometry
setColor(Color) - Method in class org.hkijena.jipipe.ui.components.icons.MonochromeColorIcon
 
setColor(Color) - Method in class org.hkijena.jipipe.utils.ColorUtils.GradientStop
 
setColorMap(ColorMap) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap
 
setColorMap(ColorMaps.CommonLabelMaps) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelColorMapIcon
 
setColorMap(ColorMaps.CommonLabelMaps) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToRGBAlgorithm
 
setColorMap(ColorMap) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorMapAlgorithm
 
setColorMap(ColorMap) - Method in class org.hkijena.jipipe.extensions.parameters.library.colors.ColorMapIcon
 
setColorMap(ColorMap) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
setColorMode(OMEColorMode) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
setColorMode(OMEColorMode) - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
setColorSelectedNodeEdges(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setColorSpaceAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
setColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotationTableToPaths
 
setColumn(String, TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Sets a column from another table column.
setColumn(String, TableColumn, boolean) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Sets a column from another table column.
setColumnC(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm
 
setColumnC(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
setColumnCountAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm
 
setColumnFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSimpleAlgorithm
 
setColumnFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm
 
setColumnFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableIntoColumnsAlgorithm
 
setColumnHeight(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
setColumnMatching(JIPipeColumMatching) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
setColumnMatching(JIPipeColumMatching) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
setColumnMatching(JIPipeColumMatching) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
setColumnName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm.Entry
 
setColumnName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.ExtractJsonDataAsTableAlgorithm.Entry
 
setColumnName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.TextDataToTableAlgorithm.Entry
 
setColumnName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm.Entry
 
setColumnName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2.Entry
 
setColumnNamesAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm
 
setColumnNormalization(TableColumnNormalization) - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.ExtractJsonDataAsTableAlgorithm
 
setColumnNormalization(TableColumnNormalization) - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.TextDataToTableAlgorithm
 
setColumnNormalization(TableColumnNormalization) - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm
 
setColumnNormalization(TableColumnNormalization) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.UnMeltTableAlgorithm
 
setColumnRadius(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm
 
setColumns(ExpressionTableColumnGeneratorProcessorParameterList) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm
 
setColumns(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
setColumns(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.MontageToStackAlgorithm
 
setColumns(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
setColumns(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersFromTableAlgorithm
 
setColumns(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm
 
setColumns(ExpressionTableColumnGeneratorProcessorParameterList) - Method in class org.hkijena.jipipe.extensions.tables.nodes.GenerateColumnAlgorithm
 
setColumns(ExpressionTableColumnGeneratorProcessorParameterList) - Method in class org.hkijena.jipipe.extensions.tables.nodes.GenerateTableFromExpressionAlgorithm
 
setColumns(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableByColumnsAlgorithm
 
setColumnT(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm
 
setColumnT(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
setColumnToValue(String, Object) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Sets a column to a value.
setColumnWidth(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
setColumnX1(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm
 
setColumnX1(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
setColumnX2(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
setColumnY1(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm
 
setColumnY1(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
setColumnY2(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
setColumnZ(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm
 
setColumnZ(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
setCombinationFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SimplifyAnnotationsAlgorithm
 
setCompactMode(boolean) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.DocumentTabComponent
 
setCompareAbsolute(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.Hessian2DAlgorithm
 
setCompareAbsolute(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
setCompartment(UUID, UUID) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Sets the compartment of a node
setCompartmentId(String) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm
 
setComponentDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm
 
setComponentDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
 
setComponentIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.split.SplitFilamentsIntoConnectedComponentsAlgorithm
 
setComponentNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
setComponentNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
setComponents(List<Component>) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Action
 
setComposite(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
setCompositeROI(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
setCompression(OMETIFFCompression) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEExporterSettings
 
setConcatenate(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
setConcatenate(boolean) - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
setConcatenateDownsampledLayers(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
setConcatenateDownsampledLayers(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeTrainingTweaksSettings
 
setConcatenateDownsampledLayers(boolean) - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeTrainingTweaksSettings
 
setCondaDownloadURL(String) - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller.Configuration
 
setCondaExecutable(Path) - Method in class org.hkijena.jipipe.extensions.python.installers.SelectCondaEnvPythonInstaller.Configuration
 
setCondition(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConditionalInverterAlgorithm
 
setConfiguration(BasicMinicondaEnvPythonInstaller.Configuration) - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
 
setConfiguration(BasicPortableEnvPythonInstaller.Configuration) - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller
 
setConfiguration(REnvInstaller.Configuration) - Method in class org.hkijena.jipipe.extensions.r.installers.REnvInstaller
 
setConnectAcrossC(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
setConnectAcrossC(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
setConnectAcrossT(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
setConnectAcrossT(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
setConnectHighlight(JIPipeGraphCanvasUI.ConnectHighlight) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling2DAlgorithm
 
setConnectivity(Neighborhood3D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling3DAlgorithm
 
setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm
 
setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMaxima2DAlgorithm
 
setConnectivity(Neighborhood3D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMaxima3DAlgorithm
 
setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMinima2DAlgorithm
 
setConnectivity(Neighborhood3D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMinima3DAlgorithm
 
setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMaxima2DAlgorithm
 
setConnectivity(Neighborhood3D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMaxima3DAlgorithm
 
setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMinima2DAlgorithm
 
setConnectivity(Neighborhood3D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.RegionalMinima3DAlgorithm
 
setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm
 
setConnectivity(Neighborhood3D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm
 
setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologicalReconstruction2DAlgorithm
 
setConnectivity(Neighborhood2D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologicalReconstruction3DAlgorithm
 
setConnectivity(Neighborhood2D3D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm
 
setConnectivity(Neighborhood2D3D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm
 
setConsumeOnOverlap(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
setConsumeOnOverlap(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
setContact(String) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
setContent(List<GraphNodeParameterReference>) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup
 
setContent(T) - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameter
 
setContentPane(Container) - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
 
setContents(NodeGroupContents) - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
setContentX(int) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
setContentXY(int, int) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
setContentY(int) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
setContext(Context) - Method in class org.hkijena.jipipe.ui.components.SplashScreen
 
setContext(Context) - Method in class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
 
setContext(Context) - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
setContextActions(List<NodeUIContextAction>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
setContinueOnFailure(JIPipeGraphRunPartitionInheritedBoolean) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
setContinueOnFailure(JIPipeGraphRunPartitionInheritedBoolean) - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
setContinueOnFailure(JIPipeGraphRunPartitionInheritedBoolean) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
setContinueOnFailure(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.ContinueOnFailureSettings
 
setContinueOnFailureExportFailedInputs(JIPipeGraphRunPartitionInheritedBoolean) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
setContinueOnFailureExportFailedInputs(JIPipeGraphRunPartitionInheritedBoolean) - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
setContinueOnFailureExportFailedInputs(JIPipeGraphRunPartitionInheritedBoolean) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
setContinueOnFailureSettings(JIPipeRuntimePartition.ContinueOnFailureSettings) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
setContrastHigh(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
setContrastLow(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
setContrastThreshold(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm
 
setConverter(JIPipeDataConverter) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry.DataConverterEdge
 
setCopySlices(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm
 
setCopySlices(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm
 
setCornerSize(int) - Method in class org.hkijena.jipipe.utils.ui.RoundedLineBorder
 
setCorrectCorners(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm
 
setCorrespondingAuthor(boolean) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
setCostesRandomizations(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
setCostesSignificanceTest(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
setCount(int, int) - Method in class org.hkijena.jipipe.ui.ijupdater.IJProgressAdapter
 
setCount(int, int) - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeProgressAdapter
 
setCount(int, int) - Method in class org.hkijena.jipipe.ui.ijupdater.ProgressAdapter
 
setCountAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
setCountColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator
 
setCounterAnnotation(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.CreateStackAlgorithm
 
setCountingColumn(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm
 
setCreateCheckerboard(boolean) - Method in class org.hkijena.jipipe.extensions.imp.nodes.ConvertImpImageToImagePlusAlgorithm
 
setCreateComposite(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.MergeChannelsAlgorithm
 
setCreatedDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackToDimensionMerger2Algorithm
 
setCreatedDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackToDimensionMergerAlgorithm
 
setCriteriaMethod(IterativeThreshold3DAlgorithm.CriteriaMethod) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
setCrop(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
setCrop(boolean) - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
setCropC(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.CropToRoiAlgorithm
 
setCropC(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm
 
setCropRegions(RectangleList) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
setCropRegions(RectangleList) - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
setCropT(boolean) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode
 
setCropT(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.CropToRoiAlgorithm
 
setCropT(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm
 
setCropXY(boolean) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode
 
setCropXY(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.CropToRoiAlgorithm
 
setCropXY(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm
 
setCropZ(boolean) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode
 
setCropZ(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.CropToRoiAlgorithm
 
setCropZ(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.CropRoiListAlgorithm
 
setCudaToolkitVersion(String) - Method in class org.hkijena.jipipe.extensions.cellpose.installers.MinicondaCellposeGPUEnvInstaller.Configuration
 
setCumulative(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator
 
setCumulative(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm
 
setCumulative(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
setCurrentColor(MaskDrawerPlugin2D.MaskColor) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
setCurrentConnectionDragSource(JIPipeNodeUIActiveArea) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
setCurrentConnectionDragTarget(JIPipeNodeUIActiveArea) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
setCurrentIterationStepIndex(int) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMutableIterationContext
 
setCurrentlySelectedValue(Object) - Method in class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExtensionContentListUI
Sets the selected value * * @param currentlySelectedValue The value
setCurrentRewireDragSource(JIPipeNodeUISlotActiveArea) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
setCurrentRewireDragTarget(JIPipeNodeUISlotActiveArea) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
setCurrentTool(JIPipeToggleableGraphEditorTool) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
setCustomAnnotationMatching(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
setCustomAnnotationMatching(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
setCustomAnnotationMatching(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
setCustomAnnotationMatching(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
setCustomBackupPath(OptionalPathParameter) - Method in class org.hkijena.jipipe.extensions.settings.BackupSettings
 
setCustomColorMap(ColorListParameter) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
setCustomColumns(StringQueryExpression) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
setCustomColumns(StringQueryExpression) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
setCustomColumns(StringQueryExpression) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
setCustomColumns(StringQueryExpression) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings
 
setCustomDataLoader(CachedImagePlusDataViewerWindow.CustomDataLoader) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedImagePlusDataViewerWindow
 
setCustomDescription(HTMLText) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference
 
setCustomDescription(HTMLText) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Sets a custom description.
setCustomHeight(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableToImageAlgorithm
 
setCustomHMax(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm
 
setCustomHMin(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm
 
setCustomIcon(IconRef) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
setCustomInstallerPath(OptionalPathParameter) - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller.Configuration
 
setCustomInstallerPath(OptionalPathParameter) - Method in class org.hkijena.jipipe.extensions.r.installers.REnvInstaller.Configuration
 
setCustomInstanceGenerator(Supplier<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.collections.ListParameter
 
setCustomIsParameterCollectionVisible(BiFunction<JIPipeParameterTree, JIPipeParameterCollection, Boolean>) - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
setCustomIsParameterVisible(BiFunction<JIPipeParameterTree, JIPipeParameterAccess, Boolean>) - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
setCustomMax(double) - Method in class org.hkijena.jipipe.extensions.clij2.CLIJSettings.ContrastEnhancerSettings
 
setCustomMax(double) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm
 
setCustomMax(double) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.CalibrationParameters
 
setCustomMin(double) - Method in class org.hkijena.jipipe.extensions.clij2.CLIJSettings.ContrastEnhancerSettings
 
setCustomMin(double) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.DisplayRangeCalibrationAlgorithm
 
setCustomMin(double) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.CalibrationParameters
 
setCustomMinMax(double, double) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl
 
setCustomMinMax(double, double) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl
 
setCustomName(String) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
 
setCustomName(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder
 
setCustomName(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
Overrides the name displayed in the UI
setCustomName(String) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference
 
setCustomName(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Sets a custom name.
setCustomSizeC(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableToImageAlgorithm
 
setCustomSizeT(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableToImageAlgorithm
 
setCustomSizeZ(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableToImageAlgorithm
 
setCustomText(HTMLText) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
setCustomThreshold(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.NucleiSegmentation3DAlgorithm
 
setCustomWidth(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableToImageAlgorithm
 
setDarkBackground(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologySkeletonize2DAlgorithm
 
setDarkBackground(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm
 
setDarkBackground(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm
 
setDarkBackground(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm
 
setDarkBackground(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm
 
setDarkBackground(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm
 
setDarkBackground(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm
 
setDarkBackground(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm
 
setDarkIconURL(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
setDarkLine(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
setData(int, JIPipeData) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Sets the data of a specific row
setData(String) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
setDataAnnotation(int, JIPipeDataAnnotation) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Sets a data annotation
setDataAnnotation(int, String, JIPipeData) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Sets a data annotation
setDataAnnotationFilter(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PullDataTableAnnotations
 
setDataAnnotationFilter(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PushDataTableAnnotations
 
setDataAnnotationItemStore(int, String, JIPipeDataItemStore) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Sets a virtual data annotation
setDataAnnotationItemStore_(int, String, JIPipeDataItemStore) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Sets a virtual data annotation
setDataAnnotationMergeMode(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithData
 
setDataAnnotationMergeMode(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableArchive
 
setDataAnnotationMergeMode(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableDirectory
 
setDataAnnotationMergeMode(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PullDataTableAnnotations
 
setDataAnnotationMergeMode(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PushDataTableAnnotations
 
setDataAnnotationMergeMode(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.ImportJIPipeSlotFolderAlgorithm
 
setDataAnnotationMergeStrategy(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
setDataAnnotationMergeStrategy(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
setDataAnnotationMergeStrategy(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
setDataAnnotationMergeStrategy(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings
 
setDataAnnotationMergeStrategy(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithmIterationStepGenerationSettings
 
setDataAnnotationMergeStrategy(JIPipeDataAnnotationMergeMode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
setDataAnnotations(List<JIPipeExportedDataAnnotation>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadataRow
 
setDataBatches(List<JIPipeMultiIterationStep>) - Method in class org.hkijena.jipipe.api.JIPipeDataBatchGenerationResult
 
setDataBatches(JIPipeMultiIterationStep...) - Method in class org.hkijena.jipipe.api.JIPipeDataBatchGenerationResult
 
setDataClass(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
setDataContext(int, JIPipeDataContext) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Sets the context of data in given row
setDataContext(JIPipeDataContext) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadataRow
 
setDataConverterFunction(Function<JIPipeDataItemStore, JIPipeDataItemStore>) - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
 
setDataItemStore(int, JIPipeDataItemStore) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Sets the data of a specific row
setDataset(ImportRDatasetAlgorithm.Dataset) - Method in class org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm
 
setDatasetId(long) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMERODatasetReferenceData
 
setDatasetIds(LongList) - Method in class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMERODatasetReferenceDataSource
 
setDataSetMatching(JIPipeColumMatching) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings
 
setDataSource(JIPipeDataSource) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
setDataSourceMenuLocation(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
setDataSourceRow(int) - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
 
setDataTable(JIPipeDataTable) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantBatchPanel
 
setDataTable(JIPipeDataTable) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantDataTableUI
 
setDataTable(Store<JIPipeDataTable>) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableUI
 
setDataTable(Store<JIPipeDataTable>) - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerDataTableUI
 
setDataType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataRowFolder
 
setDataType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateZeroImage
 
setDataTypeId(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataDisplayOperationIdEnumParameter
 
setDataTypeId(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.jipipe.DynamicDataImportOperationIdEnumParameter
 
setDeallocate(boolean) - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2PullAlgorithm
 
setDecimals(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.RoundFloatImageAlgorithm
 
setDeclaredFieldValue(Object, String, Object) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
 
setDeclaredFieldValue(Class<?>, Object, String, Object) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
Sets the field value
setDeduplicate(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
setDefaultAnimationFPS(double) - Method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer2DUISettings
 
setDefaultAnimationFPS(double) - Method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer3DUISettings
 
setDefaultCredentials(OMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.extensions.omero.OMEROSettings
 
setDefaultEdgeVisibility(JIPipeGraphEdge.Visibility) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setDefaultExporterFor(Class<? extends JIPipeData>, String) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry
Sets the default exporter for a data type
setDefaultImporterFor(Class<? extends JIPipeData>, String) - Method in class org.hkijena.jipipe.api.registries.JIPipeImageJAdapterRegistry
Sets the default importer for a data type
setDefaultQuickRunThreads(int) - Method in class org.hkijena.jipipe.extensions.settings.RuntimeSettings
Sets the number of threads for test bench
setDefaultRunThreads(int) - Method in class org.hkijena.jipipe.extensions.settings.RuntimeSettings
Sets the number of threads
setDefaultRuntimePartition(JIPipeRuntimePartition) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration
 
setDefaultSortOrder(SortOrder) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByAnnotationsAlgorithm
 
setDefaultValues(ExpressionTableColumnGeneratorProcessorParameterList) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm
 
setDeletedLabel(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByThicknessAlgorithm
 
setDeleteMaskedLabels(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByMaskAlgorithm
 
setDependencies(Set<JIPipeDependency>) - Method in class org.hkijena.jipipe.JIPipeMutableDependency
 
setDependencyAlgorithmIds(Set<String>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask
 
setDependencyCitations(StringList) - Method in class org.hkijena.jipipe.api.JIPipeMetadata
 
setDependencyDatatypeClasses(Set<Class<? extends JIPipeData>>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask
Sets dependency data classes.
setDependencyDatatypeIds(Set<String>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask
 
setDependencyId(String) - Method in class org.hkijena.jipipe.JIPipeMutableDependency
Sets the ID
setDependencyVersion(String) - Method in class org.hkijena.jipipe.JIPipeMutableDependency
Sets the version
setDeprecated(boolean) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
setDeprecated(boolean) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
setDepth(int) - Method in class org.hkijena.jipipe.ui.grapheditor.general.layout.MSTGraphAutoLayoutMethod.Edge
 
setDepth(int) - Method in class org.hkijena.jipipe.ui.grapheditor.general.layout.MSTGraphAutoLayoutMethod.Node
 
setDescription(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder
 
setDescription(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
setDescription(String) - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
setDescription(HTMLText) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
setDescription(HTMLText) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup
 
setDescription(HTMLText) - Method in class org.hkijena.jipipe.api.JIPipeMetadata
Sets the description
setDescription(HTMLText) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
setDescription(HTMLText) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
Sets the description
setDescription(String) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
setDescription(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
Sets the description
setDescription(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
Sets the description
setDescription(HTMLText) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
setDescription(HTMLText) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
setDescription(HTMLText) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.ParameterFormData
 
setDescription(String) - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage
 
setDescription(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ParameterColumn
 
setDescription(String) - Method in class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency
 
setDescription(HTMLText) - Method in class org.hkijena.jipipe.ui.components.AddParameterDialog.Settings
 
setDescription(String) - Method in class org.hkijena.jipipe.ui.components.FormPanel.GroupHeaderPanel
Sets the description and sets the visibility
setDescription(HTMLText) - Method in class org.hkijena.jipipe.ui.parameters.DynamicParameterEditorDialog.ParameterEntry
 
setDescription(String) - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderPackage
 
setDespeckleIterations(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
setDetailedDataString(boolean) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithDataString
 
setDetailedDataString(boolean) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.ToDataStringAlgorithm
 
setDevice(int) - Method in class org.hkijena.jipipe.extensions.clij2.CLIJSettings
 
setDialog(JDialog) - Method in class org.hkijena.jipipe.ui.components.AddAlgorithmSlotPanel
 
setDialog(JDialog) - Method in class org.hkijena.jipipe.ui.components.AddParameterDialog
 
setDialog(JDialog) - Method in class org.hkijena.jipipe.ui.components.EditAlgorithmSlotPanel
 
setDialog(JDialog) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunExecuterUI
 
setDialogTitle(String) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
setDialogType(int) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
setDiameter(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
setDiameter(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
setDiameter(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
setDiameter(int) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
setDiameter(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
setDiameter(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
setDiameterAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
setDiameterAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
setDiameterAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
setDiamThreshold(double) - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationThresholdSettings
 
setDiceCoefficientAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm
 
setDifference(float) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.DifferenceSpotSegmentation3DAlgorithm
 
setDilationErodeSteps(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm
 
setDilationIterations(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
setDimensionCOperation(SplitRoiConnectedComponentsAlgorithm.DimensionOperation) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
setDimensionOrder(DimensionOrder) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEExporterSettings
 
setDimensionTOperation(SplitRoiConnectedComponentsAlgorithm.DimensionOperation) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
setDimensionZOperation(SplitRoiConnectedComponentsAlgorithm.DimensionOperation) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
setDirectories(ParameterCollectionList) - Method in class org.hkijena.jipipe.api.JIPipeProjectDirectories
 
setDirectories(JIPipeProjectDirectories) - Method in class org.hkijena.jipipe.api.JIPipeProjectMetadata
 
setDirectoryKey(FileChooserSettings.LastDirectoryKey) - Method in class org.hkijena.jipipe.ui.components.PathEditor
 
setDisableResample(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationTweaksSettings
 
setDisableResample(boolean) - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationTweaksSettings
 
setDisableStoreToCacheNodes(Set<UUID>) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
setDisableStoreToDiskNodes(Set<UUID>) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
setDiscardExistingAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithAnnotationTable
 
setDisconnectHighlight(JIPipeGraphCanvasUI.DisconnectHighlight) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
setDismiss(boolean) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction
 
setDisplayedMax(double) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.DisplayRange
 
setDisplayedMin(double) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.DisplayRange
 
setDisplayedParameters(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
setDistanceExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm
 
setDoCorrectPosition(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
setDocument(MarkdownDocument) - Method in class org.hkijena.jipipe.ui.components.markdown.MarkdownReader
 
setDocumentation(SetJIPipeDocumentation) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
setDocumentTab(DocumentTabPane.DocumentTab) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.DocumentTabComponent
 
setDoEstimateWidth(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
setDoExtendLine(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
setDoScaling(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm
 
setDoubleValue(double) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.StringOrDouble
 
setDragAndDropBehavior(JIPipeGraphDragAndDropBehavior) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
setDrawArrowHeads(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setDrawBorder(boolean) - Method in class org.hkijena.jipipe.ui.components.icons.OverlayColorIcon
 
setDrawEdges(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
setDrawFill(boolean) - Method in class org.hkijena.jipipe.ui.components.icons.OverlayColorIcon
 
setDrawFilledOutline(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm
 
setDrawFilledOutline(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm
 
setDrawFilledOutlineMode(ROIElementDrawingMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
setDrawFilledOutlineMode(ROIElementDrawingMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
setDrawFilledOutlineMode(ROIElementDrawingMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
setDrawFilledOutlineMode(ROIElementDrawingMode) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
setDrawHorizontal(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
setDrawHorizontal(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
setDrawImprovedEdges(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setDrawLabel(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
setDrawLabel(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelParameters
 
setDrawLabels(boolean) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.DrawerLabelSettings
 
setDrawLabels(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
setDrawLabelsOnHover(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setDrawName(boolean) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer.LabelSettings
 
setDrawnFeature(SpotFeature) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer.LabelSettings
 
setDrawnLabel(RoiLabel) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
setDrawnLabel(RoiLabel) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
setDrawnLabel(RoiLabel) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
setDrawNodeShadows(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setDrawOutline(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm
 
setDrawOutline(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm
 
setDrawOutline(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm
 
setDrawOutline(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm
 
setDrawOutlineMode(ROIElementDrawingMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
setDrawOutlineMode(ROIElementDrawingMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
setDrawOutlineMode(ROIElementDrawingMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
setDrawOutlineMode(ROIElementDrawingMode) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
setDrawOutsideEdges(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setDrawOver(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.utils.Roi3DDrawer
 
setDrawOver(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm
 
setDrawOver(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
setDrawOver(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
setDrawOver(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
setDrawOverReference(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRGBAlgorithm
 
setDrawVertical(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
setDrawVertical(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
setDrawVertices(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
setDuplicate(boolean) - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters
 
setDuplicate(boolean) - Method in class org.hkijena.jipipe.api.compat.ImageJImportParameters
 
setDuplicate(OptionalBooleanParameter) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
setDuplicate(OptionalBooleanParameter) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRef
 
setDuplicateImage(boolean) - Method in class org.hkijena.jipipe.extensions.clij2.CLIJSettings.ContrastEnhancerSettings
 
setDuplicateImage(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.LUTInverterAlgorithm
 
setDuplicateImage(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.RemoveLUTAlgorithm
 
setDuplicateImage(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorMapAlgorithm
 
setDuplicateImage(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm
 
setDuplicateImage(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromImageAlgorithm
 
setDynamic(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMaxima2DAlgorithm
 
setDynamic(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMaxima3DAlgorithm
 
setDynamic(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMinima2DAlgorithm
 
setDynamic(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.ExtendedMinima3DAlgorithm
 
setEasyInstallerRepositories(StringList) - Method in class org.hkijena.jipipe.extensions.cellpose.CellposeSettings
 
setEasyInstallerRepositories(StringList) - Method in class org.hkijena.jipipe.extensions.ilastik.IlastikSettings
 
setEasyInstallerRepositories(StringList) - Method in class org.hkijena.jipipe.extensions.omnipose.OmniposeSettings
 
setEasyInstallerRepositories(StringList) - Method in class org.hkijena.jipipe.extensions.python.adapter.PythonAdapterExtensionSettings
 
setEasyInstallerRepositories(StringList) - Method in class org.hkijena.jipipe.extensions.python.PythonExtensionSettings
 
setEasyInstallerRepositories(StringList) - Method in class org.hkijena.jipipe.extensions.r.RExtensionSettings
 
setEdgesAreBackground(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ApplyDistanceTransform2DAlgorithm
 
setEigenvalueSelection(EigenvalueSelection2D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
setEigenvalueSelection2D(EigenvalueSelection2D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.Hessian2DAlgorithm
 
setElement(Strel.Shape) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateStructureElement2DAlgorithm
 
setElement(Strel3D.Shape) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateStructureElement3DAlgorithm
 
setElement(Strel.Shape) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm
 
setElement(Strel3D.Shape) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm
 
setEmail(String) - Method in class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment
 
setEmitter(JIPipeEventEmitter<?, ?>) - Method in class org.hkijena.jipipe.api.events.AbstractJIPipeEvent
 
setEmitter(JIPipeEventEmitter<?, ?>) - Method in interface org.hkijena.jipipe.api.events.JIPipeEvent
Sets the first emitter.
setEmitter(JIPipeEventEmitter<?, ?>) - Method in class org.hkijena.jipipe.utils.ui.events.MouseClickedEvent
 
setEmitter(JIPipeEventEmitter<?, ?>) - Method in class org.hkijena.jipipe.utils.ui.events.MouseDraggedEvent
 
setEmitter(JIPipeEventEmitter<?, ?>) - Method in class org.hkijena.jipipe.utils.ui.events.MouseEnteredEvent
 
setEmitter(JIPipeEventEmitter<?, ?>) - Method in class org.hkijena.jipipe.utils.ui.events.MouseExitedEvent
 
setEmitter(JIPipeEventEmitter<?, ?>) - Method in class org.hkijena.jipipe.utils.ui.events.MouseMovedEvent
 
setEmitter(JIPipeEventEmitter<?, ?>) - Method in class org.hkijena.jipipe.utils.ui.events.MousePressedEvent
 
setEmitter(JIPipeEventEmitter<?, ?>) - Method in class org.hkijena.jipipe.utils.ui.events.MouseReleasedEvent
 
setEnable3D(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
setEnable3D(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
setEnable3DSegmentation(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
setEnable3DSegmentation(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
setEnable3DSegmentation(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
setEnable3DSegmentation(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
setEnable3DSegmentation(boolean) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
setEnable3DSegmentation(boolean) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
setEnableBackups(boolean) - Method in class org.hkijena.jipipe.extensions.settings.BackupSettings
 
setEnabled(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
setEnabled(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
 
setEnabled(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
setEnabled(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings
 
setEnabled(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
setEnabled(boolean) - Method in class org.hkijena.jipipe.extensions.omero.parameters.AnnotationsToOMEROKeyValuePairExporter
 
setEnabled(boolean) - Method in class org.hkijena.jipipe.extensions.omero.parameters.OMEROKeyValuePairToAnnotationImporter
 
setEnabled(boolean) - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameter
 
setEnabled(boolean) - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesBuilder
 
setEnableFiltering(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
setEnableGPU(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeGPUSettings
 
setEnableGPU(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationModelSettings_Old
Deprecated.
 
setEnableNotifications(boolean) - Method in class org.hkijena.jipipe.extensions.settings.NotificationUISettings
 
setEnableParallelization(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
setEnableSearch(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings.SearchSettings
 
setEnableTabContextMenu(boolean) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
 
setEnableWatershed(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm
 
setEnd(Scene3DLineGeometry.LineEndPoint) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry
 
setEnforceEdgesWithinMask(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
setEnforceEdgesWithinMask(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
setEnforceOverlap(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings
 
setEnforceOverlap(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
setEnforceSameComponent(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
setEnforceSameComponent(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.SmoothFilamentsAlgorithm
 
setEnsureMinNumberOfRows(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.GenerateColumnAlgorithm
 
setEnsureNoPathExists(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
setEntries(List<JIPipeNodeDatabaseEntry>) - Method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase
 
setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.AnnotateOMEWithMetadataAlgorithm
 
setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.ome.OMEMetadataToTableAlgorithm
 
setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.AnnotateWithJsonDataAlgorithm
 
setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.ExtractJsonDataAsTableAlgorithm
 
setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.AnnotateWithTextDataAlgorithm
 
setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.TextDataToTableAlgorithm
 
setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.AnnotateWithXPathDataAlgorithm
 
setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm
 
setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2
 
setEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByExpressionAlgorithm
 
setEnvironment(ProcessEnvironment) - Method in class org.hkijena.jipipe.extensions.ilastik.IlastikSettings
 
setEnvironment(REnvironment) - Method in class org.hkijena.jipipe.extensions.r.RExtensionSettings
 
setEnvironmentName(String) - Method in class org.hkijena.jipipe.extensions.python.installers.SelectCondaEnvPythonInstaller.Configuration
 
setEnvironmentVariables(StringQueryExpressionAndStringPairParameter.List) - Method in class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
setEnvironmentVariables(StringQueryExpressionAndStringPairParameter.List) - Method in class org.hkijena.jipipe.extensions.python.PythonEnvironment
 
setEnvironmentVariables(StringQueryExpressionAndStringPairParameter.List) - Method in class org.hkijena.jipipe.extensions.r.REnvironment
 
setEqualHyperstackDimensions(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm
 
setEqualizeFrequencies(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm
 
setEqualWidthAndHeight(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm
 
setErosionIterations(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
setErroneousDataTypes(Set<Class<? extends JIPipeData>>) - Method in class org.hkijena.jipipe.JIPipeRegistryIssues
 
setErroneousNodes(Set<JIPipeNodeInfo>) - Method in class org.hkijena.jipipe.JIPipeRegistryIssues
 
setErroneousParameterTypes(Set<JIPipeParameterTypeInfo>) - Method in class org.hkijena.jipipe.JIPipeRegistryIssues
 
setErroneousPlugins(Set<PluginInfo<JIPipeJavaPlugin>>) - Method in class org.hkijena.jipipe.JIPipeRegistryIssues
 
setError(String) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
setError(Component) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
setErrorExplanation(String) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.CrasherAlgorithm
 
setErrorSolution(String) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.CrasherAlgorithm
 
setErrorTitle(String) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.CrasherAlgorithm
 
setEstimateHighThreshold(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
setEstimateLowThreshold(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
setEstimateSigma(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
setExactValue(double) - Method in class org.hkijena.jipipe.extensions.expressions.NumericFunctionExpression
Sets the expression to an exact value
setExcludeEdgeROIs(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
setExcludeEdges(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
setExcludeEdges(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm
 
setExcludeEdges(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
setExcludeExistingEndpoints(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
setExcludeOnEdges(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationThresholdSettings
 
setExcludeOnEdges(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm
 
setExcludeOnEdges(boolean) - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationThresholdSettings
 
setExcludeSelected(boolean) - Method in class org.hkijena.jipipe.ui.quickrun.QuickRunSettings
 
setExcludeZero(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByThicknessAlgorithm
 
setExcludeZero(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm
 
setExcludeZero(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm
 
setExcludeZero(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm
 
setExecutablePath(Path) - Method in class org.hkijena.jipipe.extensions.python.PythonEnvironment
 
setExecutablePathLinux(Path) - Method in class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
setExecutablePathOSX(Path) - Method in class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
setExecutablePathWindows(Path) - Method in class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
setExpandCanvas(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm
 
setExpectedNumberOfObjects(int) - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
setExpectedStep(double) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm
 
setExportAsDisplayed(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer2DUISettings
 
setExportAsROIFile(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportROIAlgorithm
Deprecated.
 
setExportAsROIFile(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportROIAlgorithm2
 
setExportDelay(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.MacroWrapperAlgorithm
 
setExportedParameters(GraphNodeParameterReferenceGroupCollection) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
 
setExportedParameters(GraphNodeParameterReferenceGroupCollection) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
setExportedParameters(GraphNodeParameterReferenceGroupCollection) - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
setExportedParameters(GraphNodeParameterReferenceGroupCollection) - Method in class org.hkijena.jipipe.ui.settings.JIPipeProjectInfoParameters
 
setExportedPreviewSizes(IntegerAndIntegerPairParameter.List) - Method in class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
setExporter(JIPipeDataByMetadataExporter) - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToFilesByMetadataExporterRun.Settings
 
setExporterId(String) - Method in class org.hkijena.jipipe.api.compat.ImageJDataExportOperation
 
setExporterParametersFromUI(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.RunImageJExporterAlgorithm
 
setExporterSettings(OMEExporterSettings) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.OMEImageData
 
setExporterType(ImageJDataExporterRef) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.RunImageJExporterAlgorithm
 
setExportFailedLoopInputs(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.ContinueOnFailureSettings
 
setExportFailedPartitionInputs(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.ContinueOnFailureSettings
 
setExportHeavyData(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings
 
setExportHeight(int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
setExportLightweightData(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings
 
setExportLoopIntermediateResults(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings
 
setExportLoopTerminating(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition.OutputSettings
 
setExportWidth(int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
setExpression(String) - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
 
setExpression(PathQueryExpression) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ModifyPath
 
setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ModifyPathWithExpression
 
setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.ColorToGreyscaleExpression2D
 
setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression2DAlgorithm
 
setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression3DAlgorithm
 
setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyColorMathExpression2DExpression
 
setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DExpression
 
setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression
 
setExpression(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm
 
setExpression(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm
 
setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ColorThresholdExpression2D
 
setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRange
 
setExpression(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.tables.nodes.ModifyTableColumnNamesAlgorithm
 
setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.RunExpressionAlgorithm
 
setExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.utils.ui.ExpressionTesterUI
 
setExpressionC(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
setExpressionList(ExpressionTableColumnGeneratorProcessorParameterList) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm
Deprecated.
 
setExpressionT(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
setExpressionZ(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
setExtendTarget(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm
 
setExtensionFilters(List<FileNameExtensionFilter>) - Method in class org.hkijena.jipipe.ui.components.PathEditor
 
setExtensionFilters(String[]) - Method in class org.hkijena.jipipe.ui.components.PathEditor
 
setExtensions(StringList) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
setExternalDownloaderProcess(DownloadSettings.DownloadEnvironment) - Method in class org.hkijena.jipipe.extensions.settings.DownloadSettings
 
setExternalScriptFile(OptionalPathParameter) - Method in class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameter
 
setExtractRois(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
setExtractRois(boolean) - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
setExtraRuntimePartitions(List<JIPipeRuntimePartition>) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration
 
setFactorX(double) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.SmoothFilamentsAlgorithm
 
setFactorY(double) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.SmoothFilamentsAlgorithm
 
setFactoryType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.imagej2.algorithms.CreateIJ2OutOfBoundsFactoryAlgorithm
 
setFactorZ(double) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.SmoothFilamentsAlgorithm
 
setFadeTrackRange(int) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
setFalseNegativeErrorAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm
 
setFalsePositiveErrorAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm
 
setFalseString(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.BooleanFormData
 
setFast(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi2DToRoi3DConverterAlgorithm
 
setFastMode(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer
 
setFastMode(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
setFastMode(boolean) - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationTweaksSettings
 
setFeature(SpotFeature) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeatureFilterParameter
 
setFeature(SpotFeature) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeaturePenaltyParameter
 
setFeature(TrackFeature) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeatureFilterParameter
 
setFieldClass(Class<?>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
Sets the field class
setFieldClass(Class<?>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
For internal usage only
setFieldClass(Class<?>) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ParameterColumn
 
setFieldClassInfoId(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
setFieldClassInfoId(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ParameterColumn
 
setFieldValue(Object, String, Object) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
Sets the field value
setFieldValue(Class<?>, Object, String, Object) - Static method in class org.hkijena.jipipe.utils.ReflectionUtils
Sets the field value
setFilamentDrawer(FilamentsDrawer) - Method in class org.hkijena.jipipe.extensions.ijfilaments.settings.ImageViewerUIFilamentDisplaySettings
 
setFilamentsList(List<Filaments3DData>) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
setFileChooserType(FileChooserSettings.FileChooserType) - Method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
 
setFileFilter(FileNameExtensionFilter) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
setFileFormat(ExportImageAlgorithm.FileFormat) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImage2Algorithm
 
setFileFormat(ExportImageAlgorithm.FileFormat) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
setFileFormat(ExportImageAlgorithm.FileFormat) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm
 
setFileFormat(ExportTableAlgorithm.FileFormat) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm
Deprecated.
 
setFileFormat(ExportTableAlgorithm.FileFormat) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm2
 
setFileFormat(ResultsTableFromFile.FileFormat) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ResultsTableFromFile
 
setFileFormat(ImpImageOutputFormat) - Method in class org.hkijena.jipipe.extensions.imp.nodes.ExportImpImageAlgorithm
 
setFileName(Path) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileDataSource
Sets the file name
setFileNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotateWithPathProperties
 
setFileNameAnnotation(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROTableAlgorithm
 
setFileNameGenerator(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter
 
setFileNameGenerator(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROImageAlgorithm
 
setFileNameGenerator(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROTableAlgorithm
 
setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ConvertToExportedPath
 
setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter2
 
setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.ExportROI3DAlgorithm2
 
setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImage2Algorithm
 
setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportROIAlgorithm2
 
setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm2
 
setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2
 
setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.BioFormatsExporter2
 
setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imp.nodes.ExportImpImageAlgorithm
 
setFilePath(DataExportExpressionParameter) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.ExportScene3DToColladaAlgorithm2
 
setFiles(PathList) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileListDataSource
Sets the file names
setFiles(List<NodeTemplateDownloaderPackage>) - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderRepository
 
setFiles(Iterable<FileObject>) - Method in class org.hkijena.jipipe.ui.ijupdater.FileTableModel
 
setFiles(FilesCollection) - Method in class org.hkijena.jipipe.ui.ijupdater.FileTableModel
 
setFiles(List<ProjectTemplateDownloaderPackage>) - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderRepository
 
setFilesCollection(FilesCollection) - Method in class org.hkijena.jipipe.ui.ijupdater.ManagerUI
 
setFilesCollection(FilesCollection) - Method in class org.hkijena.jipipe.ui.ijupdater.UpdateSiteListUI
 
setFileSelectionMode(int) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
setFill(Paint) - Method in class org.hkijena.jipipe.utils.ui.RoundedLineBorder
 
setFillBox(boolean) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Sets the flag that controls whether or not the box is filled and sends a RendererChangeEvent to all registered listeners.
setFillColor(Color) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
setFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.TextBoxAnnotationGraphNode.ShapeParameters
 
setFillColor(Color) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
setFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
setFillColor(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
setFillColor(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode
 
setFillColor(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertTracksToRoiNode
 
setFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.ROIProperties
 
setFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
setFillColor(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
setFillColor(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
setFillColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
setFillColor(Color) - Method in interface org.hkijena.jipipe.ui.components.icons.ColorIcon
 
setFillColor(Color) - Method in class org.hkijena.jipipe.ui.components.icons.OverlayColorIcon
 
setFillColor(Color) - Method in class org.hkijena.jipipe.ui.components.icons.SolidColorIcon
 
setFillColorAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
setFillMeasurement(ROI3DMeasurementColumn) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ColorRoi3DByStatisticsAlgorithm
 
setFillMeasurement(MeasurementColumn) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm
 
setFillOutline(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm
 
setFillOutline(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm
 
setFillSpots(boolean) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer
 
setFilter(AnnotationFilterExpression) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.FilterByAnnotation
 
setFilter(AnnotationFilterExpression) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.FilterByAnnotationIfElse
 
setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm
 
setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.FilterFilamentEdgesByProperties
 
setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.FilterFilamentsByProperties
 
setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.FilterFilamentVerticesByProperties
 
setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.parameters.EdgeMaskParameter
 
setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.parameters.VertexMaskParameter
 
setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SpotFilterNode
 
setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TrackFilterNode
 
setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByThicknessAlgorithm
 
setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm
 
setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.omero.parameters.AnnotationsToOMEROKeyValuePairExporter
 
setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.omero.parameters.OMEROKeyValuePairToAnnotationImporter
 
setFilter(TableCellValueQueryExpression) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnsToAnnotationsAlgorithm
 
setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm
 
setFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm
 
setFilterExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.RemoveROI3DMetadataAlgorithm
 
setFilterExpression(PathQueryExpression) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
 
setFilterExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.RemoveImageMetadataAlgorithm
 
setFilterExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.RemoveROIMetadataAlgorithm
 
setFilterFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
setFilterFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
setFilterListHideInvisible(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
setFilterListOnlySelected(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
setFilterListOnlySelected(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
setFilterListOnlySelected(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
setFilters(PathQueryExpression) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.FilterPaths
 
setFilters(PathQueryExpression) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ListFiles
 
setFilters(PathQueryExpression) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ListSubfolders
 
setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm
 
setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm
 
setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm
 
setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm
 
setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListDatasetsAlgorithm
 
setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListGroupsAlgorithm
 
setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListImagesAlgorithm
 
setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListProjectsAlgorithm
 
setFilters(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnToNumericAlgorithm
 
setFilters(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnToStringAlgorithm
 
setFilters(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RemoveColumnAlgorithm
 
setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.filter.FilterTableRowsAlgorithm
 
setFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.filter.FilterTablesAlgorithm
 
setFirst(ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceCube
 
setFirstAuthor(boolean) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
setFirstColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm
 
setFirstIndex(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
setFirstName(String) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
setFitMode(SizeFitMode) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
setFlip(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Reslicer
 
setFlipMode(TransformFlip2DAlgorithm.FlipMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformFlip2DAlgorithm
 
setFlipTemplateHorizontally(boolean) - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
setFlipTemplateVertically(boolean) - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
setFlipVertical(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ResliceAlgorithm
 
setFloatingPointOutput(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DAlgorithm
 
setFloatingPointOutput(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DMergingAlgorithm
 
setFlowThreshold(double) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationThresholdSettings
 
setFlowThreshold(double) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationThresholdSettings_Old
Deprecated.
 
setFlowThreshold(double) - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationThresholdSettings
 
setFolderPath(Path) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderDataSource
Sets the folder path
setFolderPaths(PathList) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderListDataSource
Sets the folder path
setFontFamily(FontFamilyParameter) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters
 
setFontFamily(FontFamilyParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings
 
setFontFamily(FontFamilyParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
setFontFamily(FontFamilyParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings
 
setFontFamily(FontFamilyParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
setFontSize(int) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters
 
setFontSize(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings
 
setFontSize(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
setFontSize(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
setFontSize(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
setFontSize(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings
 
setFontSize(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
setFontStyle(FontStyleParameter) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters
 
setFontStyle(FontStyleParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings
 
setFontStyle(FontStyleParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
setFontStyle(FontStyleParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings
 
setFontStyle(FontStyleParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
setForce2D(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi2DToRoi3DConverterAlgorithm
 
setForce2D(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.SkeletonToFilaments2DAlgorithm
 
setForcedLineThickness(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm
 
setForcedLineThickness(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm
 
setForcedLineThickness(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm
 
setForcedLineThickness(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm
 
setForcedVertexRadius(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm
 
setForcedVertexRadius(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm
 
setForcedVertexRadius(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm
 
setForcedVertexRadius(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm
 
setForceFlowGraphSolver(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
setForceFlowGraphSolver(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
setForceFlowGraphSolver(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
setForceFlowGraphSolver(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings
 
setForceFlowGraphSolver(boolean) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
setForceMeshLengthUnit(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm
 
setForceMeshLengthUnit(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
setForceMeshLengthUnit(boolean) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.MaskTo3DMeshAlgorithm
 
setForceNAIsAny(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
setForceNAIsAny(boolean) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
setForceName(boolean) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter
 
setForceName(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter2
 
setForceNativeImport(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
 
setForceNativeImport(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ImagePlusFromFile
 
setForceNumColumns(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
setForceNumRows(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
setForcePassThroughLoopIterationInCaching(boolean) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
setForcePythonVersion(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller.Configuration
 
setForceReflection(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
 
setForceRGB(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
setForegroundColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
setForegroundColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
setFrame(int) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
setFrame(int) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.NonSpatialPoint3d
 
setFrameLocation(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
setFrameLocation(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
setFramesSizeAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
setFrom(JIPipeDataSlotInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder
 
setFullPath(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.SimplePathAnnotationGenerator
 
setFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
 
setFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateFromMathExpression2D
 
setFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
 
setFunctional(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
setFunctions(StringPatternExtractionFunction.List) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractAndReplaceAnnotation
 
setGaussianKernelRadius(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm
 
setGaussianKernelWidth(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm
 
setGaussianSigma(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm
 
setGaussPC(double) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.GaussianFitSpotSegmentation3DAlgorithm
 
setGaussSigma(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
setGenerateCachePreviews(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
setGenerateConnectedComponents(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
setGenerateConnectedComponents(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeTrainingTweaksSettings
 
setGenerateConnectedComponents(boolean) - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeTrainingTweaksSettings
 
setGeneratedAnnotation(String) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithDataString
Sets generated annotation type
setGeneratedAnnotation(String) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithSourceSlot
Sets generated annotation type
setGeneratedAnnotation(String) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.GenerateRandomUniqueAnnotation
Sets generated annotation type
setGeneratedAnnotation(String) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.GenerateUniqueAnnotation
Sets generated annotation type
setGeneratedAnnotation(String) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.SimpleFileAnnotationGenerator
Sets generated annotation type
setGeneratedAnnotation(String) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.SimpleFolderAnnotationGenerator
Sets the generated annotation type
setGeneratedAnnotation(String) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.SimplePathAnnotationGenerator
 
setGeneratedAnnotation(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.ExplodeRoi3DListAlgorithm
 
setGeneratedAnnotation(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.split.ExplodeRoiAlgorithm
 
setGeneratedAnnotation(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableIntoColumnsAlgorithm
 
setGeneratedAnnotationName(String) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SimplifyAnnotationsAlgorithm
 
setGeneratedAnnotations(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByProjectPaths
 
setGeneratedAnnotations(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateDataWithTableValues
 
setGeneratedColumns(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator
 
setGeneratedImageType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ConvertImageAlgorithm
 
setGeneratedImageType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
 
setGeneratedImageType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ImagePlusFromFile
 
setGeneratedRows(int) - Method in class org.hkijena.jipipe.extensions.tables.nodes.GenerateTableFromExpressionAlgorithm
 
setGeneratedType(ColumnContentType) - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnGeneratorParameter
 
setGeneratedValues(DynamicStringSetParameter) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.EnumParameterGenerator
 
setGenerateOnePerBatch(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
 
setGenerateOnePerBatch(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingZeroImage
 
setGenerateResultPreviews(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
setGeneratorType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnGeneratorParameter
 
setGetDams(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm
 
setGetter(Supplier<Object>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
Sets the getter
setGetter(Method) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
setGpuDevice(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeGPUSettings
 
setGradientRadius(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
setGradientStops(List<ColorUtils.GradientStop>) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.LUTData
 
setGraph(JIPipeGraph) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
setGraph(JIPipeGraph) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection
 
setGraphEditCursor(Point) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
setGraphEditor(JIPipeGraphEditorUI) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeConnectGraphEditorTool
 
setGraphEditor(JIPipeGraphEditorUI) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeCropViewGraphEditorTool
 
setGraphEditor(JIPipeGraphEditorUI) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeDefaultGraphEditorTool
 
setGraphEditor(JIPipeGraphEditorUI) - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool
 
setGraphEditor(JIPipeGraphEditorUI) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeMoveNodesGraphEditorTool
 
setGraphEditor(JIPipeGraphEditorUI) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
setGraphEditor(JIPipeGraphEditorUI) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNodeTool
 
setGraphPostprocessing(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
setGraphRun(JIPipeGraphRun) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNodeRunContext
Sets the JIPipeGraphRun that is currently executing
setGreenRedThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
setGreenThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
setGreyscaleCorrection(boolean) - Method in class org.hkijena.jipipe.extensions.imp.nodes.ImportImpImageAlgorithm
 
setGridColor(Color) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
setGridHeight(int) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode
 
setGridWidth(int) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode
 
setGroupId(long) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROGroupReferenceData
 
setGroupIds(LongList) - Method in class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROGroupReferenceDataSource
 
setGroupName(String) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.GroupSceneAlgorithm
 
setHasParameterSlot(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings
 
sethBarWidth(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
setHdf5Path(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.ExportIlastikHDF5ImageAlgorithm
 
setHdf5Path(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.ImportIlastikHDF5ImageAlgorithm
 
setHeading(String) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
setHeight(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap
 
setHeight(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateZeroImage
 
setHeight(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateFromMathExpression2D
 
setHeight(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
 
setHeight(int) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.SnapshotSettings
 
setHeight(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
setHeight(int) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Action
 
setHeightAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
setHeightTolerance(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm
 
setHidden(boolean) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
setHidden(boolean) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
setHidden(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
Sets the visibility
setHidden(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
setHidden(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
setHidden(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
setHidden(boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
setHideLabels(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings
 
setHideLabels(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings
 
setHideText(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
setHighlightColor(Color) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
setHighlightedComponents(Set<Component>) - Method in class org.hkijena.jipipe.ui.components.FormPanel.FormPanelContentPanel
 
setHighThreshold(float) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.HysteresisSegmentation3DAlgorithm
 
setHighThreshold(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm
 
setHistogramNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
setHistogramType(HistogramPlotData.HistogramType_) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
sethLabel(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
setHollowVertices(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
setHorizontalBarSize(OptionalQuantity) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
setHorizontalBarSize(OptionalQuantity) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
setHorizontalLabel(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings
 
setHorizontalLabel(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings
 
setHost(String) - Method in class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment
 
setHotkey(UUID, UUID, NodeHotKeyStorage.Hotkey) - Method in class org.hkijena.jipipe.ui.grapheditor.NodeHotKeyStorage
 
setHotkeys(Map<String, Map<NodeHotKeyStorage.Hotkey, String>>) - Method in class org.hkijena.jipipe.ui.grapheditor.NodeHotKeyStorage
 
setHueThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
setIcon(String) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData
 
setIcon(IconRef) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
setIcon(Icon) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction
 
setIcon(IconRef) - Method in class org.hkijena.jipipe.extensions.core.nodes.JIPipeCommentNode
 
setIcon(ColorIcon) - Method in class org.hkijena.jipipe.ui.components.ColorChooserButton
 
setIcon(ImageIcon) - Method in class org.hkijena.jipipe.ui.components.icons.ZoomIcon
 
setIcon(Image) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
setIconName(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.IconRef
 
setIconURL(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
setId(String) - Method in class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext
 
setId(String) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
setId(String) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
Sets the ID
setId(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExporterRef
 
setId(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
setId(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImporterRef
 
setId(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRef
 
setId(String) - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnConversionParameter
Sets the ID of the selected entry
setId(String) - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnIntegrationParameter
Sets the ID of the selected entry
setId(String) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
Sets the ID
setId(String) - Method in class org.hkijena.jipipe.ui.components.AddParameterDialog.Settings
 
setId(String) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Band
 
setId(String) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Task
 
setIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm
 
setIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm
 
setIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm
 
setIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROImageAlgorithm
 
setIgnoreAnnotationColumnsOnTrivialMatch(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
setIgnoreC(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
setIgnoreC(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm
 
setIgnoreC(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
setIgnoreC(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
setIgnoreC(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
setIgnoreC(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
setIgnoreC(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
setIgnoreC(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
setIgnoreC(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
setIgnoreC(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
setIgnoreCustomParameters(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
 
setIgnoreDeactivatedInputs(boolean) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
setIgnoreDeclaration(boolean) - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.PrettifyXMLAlgorithm
 
setIgnoreEmptyTables(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm
 
setIgnoreErrors(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process.OutlineRoi3DAlgorithm
 
setIgnoreImportedDataAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableArchive
 
setIgnoreImportedDataAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableDirectory
 
setIgnoreImportedDataAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.ImportJIPipeSlotFolderAlgorithm
 
setIgnoreImportedTextAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableArchive
 
setIgnoreImportedTextAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableDirectory
 
setIgnoreImportedTextAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.ImportJIPipeSlotFolderAlgorithm
 
setIgnoreInputDataAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableArchive
 
setIgnoreInputDataAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableDirectory
 
setIgnoreInputDataAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.ImportJIPipeSlotFolderAlgorithm
 
setIgnoreInputTextAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableArchive
 
setIgnoreInputTextAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableDirectory
 
setIgnoreInputTextAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.ImportJIPipeSlotFolderAlgorithm
 
setIgnoreInvalidSlices(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
 
setIgnoreInvalidValues(boolean) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.AnnotationsToParametersAlgorithm
 
setIgnoreMissingAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractDataAnnotation
 
setIgnoreMissingAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm
 
setIgnoreMissingChannels(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm
 
setIgnoreMissingChannels(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsAlgorithm
Deprecated.
 
setIgnoreMissingChannels(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
setIgnoreMissingColumns(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm
 
setIgnoreMissingImages(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
setIgnoreMissingOutputs(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
setIgnoreMissingRoiIndices(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.SetROI3DMetadataFromTableAlgorithm
 
setIgnoreMissingRoiIndices(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetROIMetadataFromTableAlgorithm
 
setIgnoreMissingSheets(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ResultsTableFromFile
 
setIgnoreMissingSlices(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm
 
setIgnoreNodeFunctionalEquals(boolean) - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache
 
setIgnoreNon2DEdges(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm
 
setIgnorePreActivationChecks(boolean) - Method in class org.hkijena.jipipe.extensions.settings.ExtensionSettings
 
setIgnoreReflectionParameters(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
 
setIgnoreT(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
setIgnoreT(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm
 
setIgnoreT(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
setIgnoreT(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
setIgnoreT(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
setIgnoreT(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
setIgnoreT(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
setIgnoreT(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
setIgnoreT(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
setIgnoreT(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
setIgnoreValidation(boolean) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.RunJIPipeProjectAlgorithm
 
setIgnoreZ(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
setIgnoreZ(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
setIgnoreZ(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
setIgnoreZ(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
setIgnoreZ(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ExtractImageInRoiAlgorithm
 
setIgnoreZ(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
setIgnoreZero(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm
 
setImage(ImageParameter) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
setImage(ImagePlusData) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
setImage(ImagePlusData) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
setImage(ImagePlus) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
Deprecated.
setImage(BufferedImage, ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
setImage(BufferedImage) - Method in class org.hkijena.jipipe.extensions.parameters.library.images.ImageParameter
 
setImageArea(Margin) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm
 
setImageArea(Margin) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
setImageData(ImagePlusData) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
setImageFile(Path) - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail
 
setImageFilters(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ImagePlusFromGUI
 
setImageFiltersOperation(LogicalOperation) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ImagePlusFromGUI
 
setImageHeightAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
setImageHeightAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
setImageHeightAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm
 
setImageId(long) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROImageReferenceData
 
setImageIds(LongList) - Method in class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROImageReferenceDataSource
 
setImageJUpdateSiteDependencies(List<JIPipeImageJUpdateSiteDependency>) - Method in class org.hkijena.jipipe.JIPipeMutableDependency
 
setImageJUpdateSites(List<JIPipeImageJUpdateSiteDependency>) - Method in class org.hkijena.jipipe.JIPipeMutableDependency
 
SetImageMetadataFromTableAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata
 
SetImageMetadataFromTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.SetImageMetadataFromTableAlgorithm
 
SetImageMetadataFromTableAlgorithm(SetImageMetadataFromTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.SetImageMetadataFromTableAlgorithm
 
setImagePlus(ImagePlus) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedImagePlusDataViewerWindow.CustomDataLoader
 
setImagePlus(ImagePlus) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
setImageProperties(ImagePlus, Map<String, String>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Sets the properties of a ImagePlus from a map
setImageTitle(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.metadata.ChangeImageMetadataFromExpressionsAlgorithm
 
setImageTypeAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
setImageWidthAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
setImageWidthAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
setImageWidthAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm
 
SetImpAlphaChannelAlgorithm - Class in org.hkijena.jipipe.extensions.imp.nodes
 
SetImpAlphaChannelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imp.nodes.SetImpAlphaChannelAlgorithm
 
SetImpAlphaChannelAlgorithm(JIPipeIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imp.nodes.SetImpAlphaChannelAlgorithm
 
setImportant(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
Allows to make the parameter important (only for UI)
setImportant(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
setImportant(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
setImportDelay(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.MacroWrapperAlgorithm
 
setImporterId(String) - Method in class org.hkijena.jipipe.api.compat.ImageJDataImportOperation
 
setImporterParametersFromUI(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.RunImageJImporterAlgorithm
 
setImporterType(ImageJDataImporterRef) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.RunImageJImporterAlgorithm
 
setImproved(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.SymmetryFilter3DAlgorithm
 
setInbox(JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
setIncludeAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm
 
setIncludeAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm
 
setIncludeAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm
 
setIncludeAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm
 
setIncludeAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.filter.FilterTablesAlgorithm
 
setIncludeHoles(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
setIncrements(IntegerList) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData
 
setIndent(int) - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.PrettifyXMLAlgorithm
 
setIndex(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadataRow
Sets the location
setIndex(int) - Method in class org.hkijena.jipipe.api.runtimepartitioning.RuntimePartitionReferenceParameter
 
setIndexAnnotation(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm
 
setIndexAnnotation(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm
 
setIndexColumn(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.ExtractROI3DMetadataAlgorithm
 
setIndexColumn(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.ExtractROIMetadataAlgorithm
 
setIndexIncrement(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
setIndexMeshes(boolean) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.ExportScene3DToColladaAlgorithm
Deprecated.
 
setIndexMeshes(boolean) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.ExportScene3DToColladaAlgorithm2
 
setIndexMeshes(boolean) - Method in class org.hkijena.jipipe.extensions.scene3d.utils.Scene3DToColladaExporter
 
setIndicesC(IntegerRange) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm
 
setIndicesT(IntegerRange) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm
 
setIndicesZ(IntegerRange) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.HyperstackSlicerAlgorithm
 
setInfo(JIPipeNodeInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Sets the JIPipeNodeInfo that describes this algorithm.
setInfo(JIPipeDataInfo) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRef
 
setInfo(JIPipeNodeInfo) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeNodeInfoRef
 
setInfo(JIPipeParameterTypeInfo) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeParameterTypeInfoRef
 
setInheritanceConversions(Map<JIPipeDataInfo, JIPipeDataInfo>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder
Deprecated.
setInheritedSlot(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder
Deprecated.
setInitialDirectory(Path) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
setInput(I) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter
 
setInputAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.forms.utils.SingleAnnotationIOSettings
 
setInputColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
setInputData(JIPipeDataSlot, int) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Sets the input slot to only one row
setInputData(JIPipeDataSlot, int) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Sets the data row of a given slot.
setInputIsEDM(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm
 
setInputMasks(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
setInputSealed(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Seals/Unseals input slots
setInputSlots(List<AddJIPipeInputSlot>) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
Sets the input slots
setInsets(Rectangle) - Method in class org.hkijena.jipipe.ui.components.icons.OverlayColorIcon
 
setInsets(Insets) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Action
 
setInstallationPath(Path) - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller.Configuration
 
setInstallationPath(Path) - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller.Configuration
 
setInstallationPath(Path) - Method in class org.hkijena.jipipe.extensions.r.installers.REnvInstaller.Configuration
 
setInstallDir(String) - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
setInstallNumpy(boolean) - Method in class org.hkijena.jipipe.extensions.python.installers.MinicondaEnvPythonInstaller.Configuration
 
setInstallNumpy(boolean) - Method in class org.hkijena.jipipe.extensions.python.installers.PortableEnvPythonInstaller.Configuration
 
setInstallPandas(boolean) - Method in class org.hkijena.jipipe.extensions.python.installers.MinicondaEnvPythonInstaller.Configuration
 
setInstallPandas(boolean) - Method in class org.hkijena.jipipe.extensions.python.installers.PortableEnvPythonInstaller.Configuration
 
setInstallScikitImage(boolean) - Method in class org.hkijena.jipipe.extensions.python.installers.MinicondaEnvPythonInstaller.Configuration
 
setInstallScikitImage(boolean) - Method in class org.hkijena.jipipe.extensions.python.installers.PortableEnvPythonInstaller.Configuration
 
setInstallScikitLearn(boolean) - Method in class org.hkijena.jipipe.extensions.python.installers.MinicondaEnvPythonInstaller.Configuration
 
setInstallScikitLearn(boolean) - Method in class org.hkijena.jipipe.extensions.python.installers.PortableEnvPythonInstaller.Configuration
 
setInstallTiffFile(boolean) - Method in class org.hkijena.jipipe.extensions.python.installers.MinicondaEnvPythonInstaller.Configuration
 
setInstallTiffFile(boolean) - Method in class org.hkijena.jipipe.extensions.python.installers.PortableEnvPythonInstaller.Configuration
 
setInstance(JIPipeJavaPlugin) - Method in class org.hkijena.jipipe.JIPipeJavaExtensionInitializationInfo
 
setInstanceGenerator(Function<JIPipeDynamicParameterCollection.UserParameterDefinition, JIPipeMutableParameterAccess>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
 
setIntegrationFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator
 
setIntegrationFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm
 
setIntegrationFunctionBackground(TableColumnIntegrationParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator
 
setIntegrationFunctionBackground(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator
 
setIntegrationFunctionForeground(TableColumnIntegrationParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator
 
setIntegrationFunctionForeground(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator
 
setIntensityHistogram2D(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
setInternalGradientRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
setInternalPath(String) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableArchive
 
setInternalStoragePath(Path) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
setInternalStoragePath(Path) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Sets the internal storage path relative to the output folder.
setInterpolate(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationTweaksSettings
 
setInterpolate(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationEnhancementSettings_Old
Deprecated.
 
setInterpolate(boolean) - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationTweaksSettings
 
setInterpolationMethod(InterpolationMethod) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
 
setInterpolationMethod(InterpolationMethod) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm
 
setInterpolationMethod(InterpolationMethod) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.ImageParameters
 
setInverse(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.binary.DistanceMap3DAlgorithm
 
setInverse(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.binary.ErodedVolumeFraction3DAlgorithm
 
setInvert(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeChannelSettings
 
setInvert(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
setInvert(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.BinarizeAlgorithm
 
setInvert(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.FrangiVesselnessFeatures
 
setInvert(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures
 
setInvert(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings
 
setInvert(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm
 
setInvert(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
setInvertedMode(NumberRangeInvertedMode) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI.TrackRenderer
 
setInvertThreshold(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.MaskToRoiAlgorithm
 
setInvertThreshold(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator
 
setInvertThreshold(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator
 
setInvertThreshold(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator
 
setInvertTransform(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.Warp2DAlgorithm
 
setIoMode(PathIOMode) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
setIoMode(PathIOMode) - Method in class org.hkijena.jipipe.ui.components.PathEditor
 
setItemComparator(Comparator<T>) - Method in class org.hkijena.jipipe.ui.components.pickers.PickerDialog
 
setItemCount(int, int) - Method in class org.hkijena.jipipe.ui.ijupdater.IJProgressAdapter
 
setItemCount(int, int) - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeProgressAdapter
 
setItemCount(int, int) - Method in class org.hkijena.jipipe.ui.ijupdater.ProgressAdapter
 
setItemMargin(double) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Sets the item margin and sends a RendererChangeEvent to all registered listeners.
setItems(StringAndStringPairParameter.List) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.EnumFormData
 
setIteratePerC(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
setIteratePerT(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
setIteratePerZ(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
setIterationMode(JIPipeGraphWrapperAlgorithm.IterationMode) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
setIterationMode(JIPipeGraphWrapperAlgorithm.IterationMode) - Method in class org.hkijena.jipipe.api.grouping.JsonAlgorithm
 
setIterationMode(JIPipeGraphWrapperAlgorithm.IterationMode) - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
setIterationMode(JIPipeGraphWrapperAlgorithm.IterationMode) - Method in class org.hkijena.jipipe.api.looping.LoopStartNode
Deprecated.
 
setIterationMode(JIPipeGraphWrapperAlgorithm.IterationMode) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
setIterations(int) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ErodeEndVerticesAlgorithm
 
setIterations(int) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.GrowEndVerticesAlgorithm
 
setIterations(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.RemoveLargestRegionAlgorithm
 
setIterations(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.RemoveLargestLabelAlgorithm
 
setIterations(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm
 
setIterationStepIndexAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm
 
setIterationStepIndexAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm
 
setJaccardIndexAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm
 
setJIPipe(JIPipe) - Method in class org.hkijena.jipipe.ui.components.SplashScreen
 
SetJIPipeDocumentation - Annotation Type in org.hkijena.jipipe.api
Used within JIPipe to annotate types and methods with documentation
setJpegQuality(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImage2Algorithm
 
setJpegQuality(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
setJpegQuality(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm
 
setJsonPath(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.AnnotateWithJsonDataAlgorithm.Entry
 
setJsonPath(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.ExtractJsonDataAsTableAlgorithm.Entry
 
setJsonPath(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.strings.nodes.json.ExtractTextFromJsonAlgorithm
 
setJTextPaneFont(JTextPane, Font, Color) - Static method in class org.hkijena.jipipe.utils.UIUtils
Utility method for setting the font and color of a JTextPane.
setK(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm
 
setK(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm
 
setK(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm
 
setKeepAnnotationColumns(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.ConvertAnnotationTableToAnnotatedTables
 
setKeepCurrentAnnotation(boolean) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractDataAnnotation
 
setKeepDataAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.DataAnnotationToStringAnnotation
 
setKeepOriginalAnnotations(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm
 
setKeepOriginalAnnotations(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm
 
setKeepOriginalAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.MultiIterationStepCheckerAlgorithm
 
setKeepOriginalAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm
 
setKeepOtherDataAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ExtractDataAnnotation
 
setKeepSameChannelCount(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm
 
setKeepValues(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByIdAlgorithm
 
setKendallTauRankCorrelation(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
setKernelFunction(String) - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelIterating
 
setKernelFunction(String) - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelSimpleIterating
 
setKernelScript(OpenCLKernelScript) - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelIterating
 
setKernelScript(OpenCLKernelScript) - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelSimpleIterating
 
setKernelX(Quantity) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersAlgorithm
 
setKernelY(Quantity) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersAlgorithm
 
setKernelZ(Quantity) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersAlgorithm
 
setKey(String) - Method in class org.hkijena.jipipe.api.JIPipeProjectDirectories.DirectoryEntry
 
setKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
Sets the unique key
setKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
For internal use only
setKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
setKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
setKey(String) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.ProjectUserFolderDataSource
 
setKey(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm.MetadataProperty
 
setKey(String) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column
 
setKey(String) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column
 
setKey(K) - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameter
 
setKey(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ParameterColumn
 
setKey(String) - Method in class org.hkijena.jipipe.ui.parameters.DynamicParameterEditorDialog.ParameterEntry
 
setKey(String) - Method in class org.hkijena.jipipe.utils.scripting.MacroFlag
 
setKey(String) - Method in class org.hkijena.jipipe.utils.scripting.MacroSetting
 
setKeyColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm
 
setKeyColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator
 
setKeyColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
setKeyValuePairKey(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.omero.parameters.AnnotationsToOMEROKeyValuePairExporter
 
setKeyValuePairValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.omero.parameters.AnnotationsToOMEROKeyValuePairExporter
 
setLabel(String) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction
 
setLabel(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm.ROINameToLabelEntry
 
setLabel(String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.RelabeledTableColumn
 
setLabel(String) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Band
 
setLabel(String) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Task
 
setLabelAll(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
setLabelAssignment(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm
 
setLabelBackground(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.DrawerLabelSettings
 
setLabelBackground(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
setLabelBackground(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
setLabelBackground(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelParameters
 
setLabelBackground(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
setLabelDataAnnotation(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
setLabelDataAnnotation(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
setLabelDataAnnotation(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingLabels2DAlgorithm2
 
setLabelDataAnnotation(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingMask2DAlgorithm2
 
setLabelDataAnnotation(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
setLabelExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
setLabelFontFamily(FontFamilyParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
setLabelFontFamily(FontFamilyParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelParameters
 
setLabelFontFamily(FontFamilyParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
setLabelFontSize(int) - Method in class org.hkijena.jipipe.extensions.pipelinerender.RenderPipelineRunSettings
 
setLabelFontSize(int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.Pie2DPlotData
 
setLabelFontSize(int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.Pie3DPlotData
 
setLabelForeground(Color) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.DrawerLabelSettings
 
setLabelForeground(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
setLabelForeground(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
setLabelForeground(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelParameters
 
setLabelForeground(Color) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
setLabelIdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.CropLabelsAlgorithm
 
setLabelIdLimit(OptionalIntegerRange) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.CropLabelsAlgorithm
 
setLabelIndexAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.SeparateLabelsAlgorithm
 
setLabeling(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.HysteresisSegmentation3DAlgorithm
 
setLabelLocation(Anchor) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelParameters
 
setLabelNameExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm
 
setLabels(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
setLabelSize(int) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.DrawerLabelSettings
 
setLabelSize(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
setLabelSize(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
setLabelSize(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelParameters
 
setLabelSize(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
setLanguage(ScriptLanguage) - Method in class org.hkijena.jipipe.utils.CustomEditorPane
 
setLastDataDirectory(Path) - Method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
 
setLastDateTimeInfo(String) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupSessionInfo
 
setLastDirectoryBy(FileChooserSettings.LastDirectoryKey, Path) - Method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
Sets the last directory according to the key
setLastExternalDirectory(Path) - Method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
 
setLastFillRect(Rectangle) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
setLastIndex(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
setLastModifiedTime(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotateWithPathProperties
 
setLastName(String) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
setLastParametersDirectory(Path) - Method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
 
setLastProjectsDirectory(Path) - Method in class org.hkijena.jipipe.extensions.settings.FileChooserSettings
 
setLastValue(Object, String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
setLayoutAfterAlgorithmFinder(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setLayoutAfterConnect(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setLearningRate(double) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
setLearningRate(double) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeTrainingTweaksSettings
 
setLearningRate(double) - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeTrainingTweaksSettings
 
setLeft(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
 
setLeft(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.InnerMargin
 
setLeft(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
setLegacy(boolean) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItemCollection
 
setLegendFontSize(int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
setLibraryDirectory(Path) - Method in class org.hkijena.jipipe.extensions.python.PythonPackageLibraryEnvironment
 
setLicense(String) - Method in class org.hkijena.jipipe.api.JIPipeMetadata
Sets the license
setLightnessThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
setLiHistogramChannel1(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
setLiHistogramChannel2(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
setLiICQ(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
setLimit(OptionalIntegerRange) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
setLimit(OptionalIntegerRange) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorIterationStepGenerationSettings
 
setLimit(OptionalIntegerRange) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
setLimit(OptionalIntegerRange) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorIterationStepGenerationSettings
 
setLimit(OptionalIntegerRange) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm.IterationStepGenerationSettings
 
setLimit(OptionalIntegerRange) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithmIterationStepGenerationSettings
 
setLimit(IntegerRange) - Method in class org.hkijena.jipipe.extensions.tables.nodes.filter.SliceTableRowsAlgorithm
 
setLimit(IntegerRange) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SelectDataTableRowsAlgorithm
 
setLimitConnections(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
setLimitWithEllipsis(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.LabelParameters
 
setLineColor(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode
 
setLineColor(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertTracksToRoiNode
 
setLineColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.ROIProperties
 
setLineColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
setLineColor(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
setLineColor(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
setLineColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
setLineColorAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
setLineDimension(int) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData
 
setLineLength(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm
 
setLineMeasurement(MeasurementColumn) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm
 
setLineSize(int) - Method in class org.hkijena.jipipe.utils.ui.RoundedLineBorder
 
setLineThickness(int) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ArrowAnnotationGraphNode
 
setLineThickness(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToMaskAlgorithm
 
setLineThickness(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm
 
setLineThickness(int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.LineCategoryPlotData
 
setLineThickness(int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.LineStatisticalCategoryPlotData
 
setLineThickness(int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.LineXYPlotData
 
setLineWidth(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode
 
setLineWidth(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertTracksToRoiNode
 
setLineWidth(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.ROIProperties
 
setLineWidth(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
setLineWidth(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
setLineWidth(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
setLineWidth(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
setLineWidth(double) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
setLineWidthAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
setLoaded(boolean) - Method in class org.hkijena.jipipe.JIPipeJavaExtensionInitializationInfo
 
setLoadFromCache(boolean) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
setLoadFromCache(boolean) - Method in class org.hkijena.jipipe.ui.quickrun.QuickRunSettings
 
setLoadsSynchronously(boolean) - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Sets how the image is loaded.
setLocal(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
setLocalBackground(int) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.ConstantSpotSegmentation3DAlgorithm
 
setLocalRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
setLocalWindowHeight(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression
 
setLocalWindowWidth(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression
 
setLocation(ScaleBarGenerator.ScaleBarPosition) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
setLocation(ScaleBarGenerator.ScaleBarPosition) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
setLocation(ScaleBarGenerator.ScaleBarPosition) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
setLocation(FixedMargin) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
setLocationCAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
setLocationMergingFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.SmoothFilamentsAlgorithm
 
setLocations(Map<String, Map<String, Point>>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Sets the location map.
setLocationTAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
setLocationWithin(String, Point, String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Sets the UI location of this algorithm within the specified compartment
setLocationWithin(UUID, Point, String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Sets the UI location of this algorithm within the specified compartment
setLocationXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
setLocationYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
setLocationZAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
setLogarithmic(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.TrackRenderer
 
setLogarithmic(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl.TrackRenderer
 
setLogarithmic(boolean) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI.TrackRenderer
 
setLogicalOperation(LogicalOperation) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.BitwiseLogicalOperationAlgorithm
 
setLogLimit(int) - Method in class org.hkijena.jipipe.extensions.settings.RuntimeSettings
 
setLogToStdOut(boolean) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
setLoopEndNodes(Set<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.looping.LoopGroup
 
setLoopIterationIteratingSettings(JIPipeIteratingAlgorithmIterationStepGenerationSettings) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
setLoopIterationMergingSettings(JIPipeMergingAlgorithmIterationStepGenerationSettings) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
setLoopStartNode(LoopStartNode) - Method in class org.hkijena.jipipe.api.looping.LoopGroup
 
setLowerThreshold(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
setLowThreshold(float) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.HysteresisSegmentation3DAlgorithm
 
setLowThreshold(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm
 
setLut(ImagePlus, LUT, Set<Integer>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
setLutFromColorMap(ImagePlus, ColorMap, Set<Integer>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
SetLUTFromColorMapAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut
 
SetLUTFromColorMapAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorMapAlgorithm
 
SetLUTFromColorMapAlgorithm(SetLUTFromColorMapAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorMapAlgorithm
 
SetLUTFromColorsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut
 
SetLUTFromColorsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm
 
SetLUTFromColorsAlgorithm(SetLUTFromColorsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm
 
SetLUTFromImageAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut
 
SetLUTFromImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromImageAlgorithm
 
SetLUTFromImageAlgorithm(SetLUTFromImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromImageAlgorithm
 
setMagnification(double) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SpotsToRGBNode
 
setMagnification(double) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TracksToRGBNode
 
setMagnification(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
setMagnification(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
setMainPanelContent(Component) - Method in class org.hkijena.jipipe.ui.ijupdater.ManagerUI
 
setMaintainer(String) - Method in class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency
 
setMakeFilesystemCompatible(boolean) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter
 
setMandersCorrelation(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
setManualOrder(StringList) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.SortTableColumnsAlgorithm
 
setMapFillColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ColorRoi3DByNameAlgorithm
 
setMapFillColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ColorRoi3DByStatisticsAlgorithm
 
setMapFillColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByNameAlgorithm
 
setMapFillColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm
 
setMapFillColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm
Deprecated.
 
setMapFillColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2
 
setMapLineColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByNameAlgorithm
 
setMapLineColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ColorRoiByStatisticsAlgorithm
 
setMapLineColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm
Deprecated.
 
setMapLineColor(OptionalColorMapParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2
 
setMarginBottom(int) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters
 
setMarginBottom(int) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
setMarginBottom(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm
 
setMarginLeft(int) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters
 
setMarginLeft(int) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
setMarginLeft(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm
 
setMarginRight(int) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters
 
setMarginRight(int) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
setMarginRight(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm
 
setMarginTop(int) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters
 
setMarginTop(int) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
setMarginTop(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.AddBorder2DAlgorithm
 
setMask(ImagePlus) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
setMaskColor(Color) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
setMaskGenerator(Function<ImagePlus, ImagePlus>) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
setMaskThreshold(double) - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationThresholdSettings
 
setMatrix(Matrix2DFloat) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve.ConvolveByParameter2DAlgorithm
 
setMatrix(Matrix2DFloat) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.ImageFromMatrix2DAlgorithm
 
setMax(float) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.FloatNumberRangeParameter
 
setMax(int) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.IntNumberRangeParameter
 
setMaxBlueThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
setMaxBlueYellowThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
setMaxBrightnessThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
setMaxCounter(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm
 
setMaxDistance(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm
 
setMaxDistance(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm
 
setMaxDistance(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm
 
setMaxEdgeWidth(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.pipelinerender.RenderPipelineRunSettings
 
setMaxEntries(int) - Method in class org.hkijena.jipipe.extensions.settings.HistoryJournalSettings
 
setMaxGreenRedThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
setMaxGreenThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
setMaxHueThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
setMaximizeWindows(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
setMaximum(int) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.OrthoSliderPanel
 
setMaximumBarWidth(double) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Sets the maximum bar width, which is specified as a percentage of the available space for all bars, and sends a RendererChangeEvent to all registered listeners.
setMaximumMemory(int) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.Image3DRendererSettings
 
setMaximumScale(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.FrangiVesselnessFeatures
 
setMaxInputSlots(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Sets maximum number of input slots
setMaxLength(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
setMaxLightnessThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
setMaxMemory(int) - Method in class org.hkijena.jipipe.extensions.ilastik.IlastikSettings
 
setMaxNumber(double) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.NumberRangeParameterGenerator
 
setMaxNumber(Number) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.FloatNumberRangeParameter
 
setMaxNumber(Number) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.IntNumberRangeParameter
 
setMaxNumber(Number) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameter
 
setMaxNumCircles(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
setMaxOutputSlots(int) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Sets maximum number of output slots
setMaxParticleCircularity(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
setMaxParticleSize(double) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
setMaxParticleSize(double) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm
 
setMaxParticleSize(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
setMaxParticleSphericity(double) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
setMaxParticleSphericity(double) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm
 
setMaxProgress(int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
setMaxRadius(float) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.binary.Voronoi3DAlgorithm
 
setMaxRadius(int) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.GaussianFitSpotSegmentation3DAlgorithm
 
setMaxRadius(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.DilateLabelsAlgorithm
 
setMaxRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
setMaxRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.FastCircularHoughSegmentation2DAlgorithm
 
setMaxRedThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
setMaxSaturationThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
setMaxSigma(float) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature2DSettings
 
setMaxSigma(float) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature3DSettings
 
setMaxSlope(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer
 
setMaxTableColumnSize(int) - Method in class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
setMaxThreads(int) - Method in class org.hkijena.jipipe.extensions.ilastik.IlastikSettings
 
setMaxThreshold(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm
 
setMaxThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm
 
setMaxThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm
 
setMaxThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm
 
setMaxThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ThresholdByAnnotation2DAlgorithm
 
setMaxVolumePixels(int) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
setMaxVolumePixels(int) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm
 
setMeanColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator
 
setMeanDiameter(double) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationModelSettings_Old
Deprecated.
 
setMeanVisible(boolean) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Sets the flag that controls whether or not the mean indicator is drawn for each item, and sends a RendererChangeEvent to all registered listeners.
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.Measurement3DSettings
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DStatisticsAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ColorRoi3DByStatisticsAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ExtractLabelStatisticsAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MeasurementDrawerPlugin2D.Settings
 
setMeasureInPhysicalUnits(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.Measurement2DSettings
 
setMeasurements(ROI3DMeasurementSetParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm
 
setMeasurements(ROI3DRelationMeasurementSetParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm
 
setMeasurements(ROI3DMeasurementSetParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DStatisticsAlgorithm
 
setMeasurements(ROI3DMeasurementSetParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsAlgorithm
 
setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ExtractLabelStatisticsAlgorithm
 
setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByStatisticsAlgorithm
 
setMeasurements(OverlapStatisticsSetParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.OverlapMeasureLabelsAlgorithm
 
setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm
 
setMeasurements(ROI2DRelationMeasurementSetParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm
 
setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.RoiStatisticsAlgorithm
 
setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm
 
setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm
 
setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm
 
setMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
setMedianVisible(boolean) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Sets the flag that controls whether or not the median indicator is drawn for each item, and sends a RendererChangeEvent to all registered listeners.
setMembranePatchSize(int) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature2DSettings
 
setMembranePatchSize(int) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature3DSettings
 
setMembraneSize(int) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature2DSettings
 
setMembraneSize(int) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature3DSettings
 
setMenuPath(String) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
setMenuPath(StringList) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
setMenuPath(String) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
Sets the menu path.
setMenuPathList(StringList) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
setMergeAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.ExtractTableAlgorithm
 
setMergedDataAnnotations(Map<String, JIPipeDataAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
 
setMergedDataAnnotations(Map<String, JIPipeDataAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
 
setMergedTextAnnotations(Map<String, JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
 
setMergedTextAnnotations(Map<String, JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
 
setMergeInputAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithData
 
setMergeLabelAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithData
 
setMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByProjectPaths
 
setMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.OverwriteAnnotations
 
setMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.AnnotateWithDataTableProperties
 
setMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.ExtractTableAlgorithm
 
setMergeToLargerLabel(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm
 
setMeshColor(Color) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.MaskTo3DMeshAlgorithm
 
setMeshLengthUnit(Quantity.LengthUnit) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm
 
setMeshLengthUnit(Quantity.LengthUnit) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
setMeshLengthUnit(Quantity.LengthUnit) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.MaskTo3DMeshAlgorithm
 
setMeshName(String) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.MaskTo3DMeshAlgorithm
 
setMeshNamePrefix(String) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm
 
setMeshNamePrefix(String) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
setMetadata(JIPipeMetadata) - Method in class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment
Sets the metadata
setMetadata(Map<String, String>) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
setMetadata(Map<String, String>) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentEdge
 
setMetadata(String, Object) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentEdge
 
setMetadata(Map<String, String>) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
setMetadata(String, Object) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
setMetadata(JIPipeMetadata) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
Sets metadata
setMetadata(JIPipeMetadata) - Method in class org.hkijena.jipipe.JIPipeMutableDependency
Sets the metadata
setMetadataEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
setMetadataFrom(JIPipeGraphEdge) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphEdge
 
setMetadataGenerators(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm
 
setMetadataKey(String) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.SetVertexMetadataFromImageAlgorithm
 
setMetadataName(String) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry
 
setMetadataValue(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry
 
setMethod(RollingBallBackgroundEstimator2DAlgorithm.Method) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm
 
setMethod(HistogramContrastEnhancerAlgorithm.Method) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm
 
setMethod(ZProjectorAlgorithm.Method) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm
 
setMethod(ZProjectorAlgorithm.Method) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm
 
setMethod(LabelsToROIAlgorithm.Method) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm
 
setMethod(AutoThresholder.Method) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm
 
setMethod(LocalAutoThreshold2DAlgorithm.Method) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm
 
setMimeType(String) - Method in class org.hkijena.jipipe.ui.texteditor.JIPipeTextEditor
 
setMin(float) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.FloatNumberRangeParameter
 
setMin(int) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.IntNumberRangeParameter
 
setMinBlueThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
setMinBlueYellowThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
setMinBrightnessThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
setMinContrastExp(int) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
setMinCounter(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.AddMissingRowsInSeriesAlgorithm
 
setMinGreenRedThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
setMinGreenThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
setMinHeight(int) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode
 
setMinHueThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
setMinimumNumberOfPixels(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm
 
setMinimumScale(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.FrangiVesselnessFeatures
 
setMinimumValue(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm
 
setMinLength(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
setMinLightnessThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
setMinNumber(double) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.NumberRangeParameterGenerator
 
setMinNumber(Number) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.FloatNumberRangeParameter
 
setMinNumber(Number) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.IntNumberRangeParameter
 
setMinNumber(Number) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameter
 
setMinNumCircles(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
setMinParticleCircularity(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
setMinParticleSize(double) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
setMinParticleSize(double) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm
 
setMinParticleSize(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
setMinParticleSphericity(double) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
setMinParticleSphericity(double) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.Roi3DFromLabelsAlgorithm
 
setMinPixels(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.VolumeOpening2DAlgorithm
 
setMinPixels(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.VolumeOpening3DAlgorithm
 
setMinRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
setMinRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.FastCircularHoughSegmentation2DAlgorithm
 
setMinRedThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
setMinSaturationThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
setMinScore(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.FastCircularHoughSegmentation2DAlgorithm
 
setMinSigma(float) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature2DSettings
 
setMinSigma(float) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature3DSettings
 
setMinSize(int) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationThresholdSettings_Old
Deprecated.
 
setMinThickness(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm
 
setMinThreshold(float) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.FindMaxima3DAlgorithm
 
setMinThreshold(int) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
setMinThreshold(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm
 
setMinThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm
 
setMinThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm
 
setMinThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm
 
setMinThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ThresholdByAnnotation2DAlgorithm
 
setMinTrainMasks(int) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
setMinTrainMasks(int) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeTrainingTweaksSettings
 
setMinTrainMasks(int) - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeTrainingTweaksSettings
 
setMinVolumePixels(int) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
setMinVolumePixels(int) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm
 
setMinVoxelNumber(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm
 
setMinWidth(int) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode
 
setMissingImageJSites(Set<JIPipeImageJUpdateSiteDependency>) - Method in class org.hkijena.jipipe.JIPipeRegistryIssues
 
setMissingValueReplacement(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm
 
SetMissingVariableFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.variables
 
SetMissingVariableFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.variables.SetMissingVariableFunction
 
setMode(LaplacianEdgeDetectorAlgorithm.Mode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm
 
setMode(RemoveOutliersFilter2DAlgorithm.Mode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm
 
setMode(TableToRectangularROIAlgorithm.Mode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
setMode(RoiFloodFillAlgorithm.Mode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm
 
setMode(ImageJCalibrationMode) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl
 
setMode(ImageJCalibrationMode) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl
 
setMode(StringPatternExtraction.Mode) - Method in class org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtraction
 
setMode(StringOrDouble.Mode) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.StringOrDouble
 
setMode(HTMLEditor.Mode) - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
setMode(SizeFitMode) - Method in class org.hkijena.jipipe.ui.components.ImageFrame
 
setMode(JIPipeDataTypePicker.Mode) - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker
 
setMode(JIPipeNodeInfoPicker.Mode) - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker
 
setModel(CellposeModel) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
setModel(CellposeModel) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationModelSettings_Old
Deprecated.
 
setModel(OmniposeModel) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
setModifier(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm
 
setModifier(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm
 
setMovieAnimatedDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImage2Algorithm
 
setMovieAnimatedDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
setMovieAnimatedDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm
 
setMovieFPS(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImage2Algorithm
 
setMovieFPS(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
setMovieFPS(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageDirectorySlotAlgorithm
 
setMultiChannelMode(HistogramGenerator.MultiChannelMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.HistogramGenerator
 
setMultiColorIndex(int) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
setMultiColorMax(int) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
setMultiObjectMaximumBoundingBoxOverlap(double) - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
setMultiObjectScoreThreshold(double) - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
setMultiPartOutputName(String) - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
setMultiple(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathFromUserDataSource
 
setMultiplier(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.Warp2DAlgorithm
 
setMultiSelectionEnabled(boolean) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
setName(String) - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
 
setName(String) - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters
 
setName(String) - Method in class org.hkijena.jipipe.api.compat.ImageJImportParameters
 
setName(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder
 
setName(String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail
 
setName(String) - Method in class org.hkijena.jipipe.api.data.JIPipeExportedDataAnnotation
 
setName(String) - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
setName(String) - Method in class org.hkijena.jipipe.api.environments.JIPipeEnvironment
 
setName(String) - Method in class org.hkijena.jipipe.api.grouping.JsonNodeInfo
 
setName(String) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup
 
setName(String) - Method in class org.hkijena.jipipe.api.JIPipeMetadata
Sets the name
setName(String) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
setName(String) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
Sets the name
setName(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
Sets the name
setName(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
Sets the name
setName(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
setName(String) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
setName(String) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.ParameterFormData
 
setName(String) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
setName(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm.ROINameToLabelEntry
 
setName(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator.GeneratedColumn
 
setName(String) - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage
 
setName(String) - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderRepository
 
setName(String) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROAnnotationReferenceData
 
setName(String) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMERODatasetReferenceData
 
setName(String) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROImageReferenceData
 
setName(String) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROProjectReferenceData
 
setName(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.filesystem.FileChooserBookmark
 
setName(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
setName(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRef
 
setName(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable.ParameterColumn
 
setName(String) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotDataSeries
 
setName(String) - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller.Configuration
 
setName(String) - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller.Configuration
 
setName(String) - Method in class org.hkijena.jipipe.extensions.python.installers.SelectCondaEnvPythonInstaller.Configuration
 
setName(String) - Method in class org.hkijena.jipipe.extensions.python.installers.SelectSystemPythonInstaller.Configuration
 
setName(String) - Method in class org.hkijena.jipipe.extensions.python.installers.SelectVirtualEnvPythonInstaller.Configuration
 
setName(String) - Method in class org.hkijena.jipipe.extensions.r.installers.REnvInstaller.Configuration
 
setName(String) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DIndexedMeshGeometry
 
setName(String) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry
 
setName(String) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
setName(String) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DUnindexedMeshGeometry
 
setName(String) - Method in class org.hkijena.jipipe.extensions.scene3d.model.Scene3DGroupNode
 
setName(String) - Method in interface org.hkijena.jipipe.extensions.scene3d.model.Scene3DNode
Sets the name of this node
setName(String) - Method in class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency
 
setName(String) - Method in class org.hkijena.jipipe.ui.components.AddParameterDialog.Settings
 
setName(String) - Method in class org.hkijena.jipipe.ui.parameters.DynamicParameterEditorDialog.ParameterEntry
 
setName(String) - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesBuilder
 
setName(String) - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderPackage
 
setName(String) - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderRepository
 
setNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
setNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm
 
setNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm
 
setNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm
 
setNameColumn(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.ExtractROI3DMetadataAlgorithm
 
setNameColumn(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.ExtractROIMetadataAlgorithm
 
setNameFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.DataAnnotationToStringAnnotation
 
setNameFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveDataAnnotations
 
setNameGenerator(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.omero.nodes.manage.OMEROCreateDatasetAlgorithm
 
setNamespaceMap(StringAndStringPairParameter.List) - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.AnnotateWithXPathDataAlgorithm
 
setNamespaceMap(StringAndStringPairParameter.List) - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractTextFromXMLAlgorithm
 
setNamespaceMap(StringAndStringPairParameter.List) - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm
 
setNativeLocation(Point) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUIAddSlotButtonActiveArea
 
setNativeLocation(Point) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
setNativeValue(int) - Method in class org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurementSetParameter
Sets the values from native values
setNativeValue(int) - Method in class org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurementSetParameter
Sets the values from native values
setNativeValue(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementSetParameter
Sets the values from native values
setNativeValue(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.ImageStatisticsSetParameter
Sets the values from native values
setNativeValue(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.RoiRelationMeasurementSet
Sets the values from native values
setNativeWidth(double) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUIAddSlotButtonActiveArea
 
setNativeWidth(double) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
setnDirections(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm
 
setNeedsToExist(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FileDataSource
 
setNeedsToExist(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.FolderDataSource
 
setNeedsToExist(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathDataSource
 
setNeighborhood(Neighborhood3D) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi2DToRoi3DConverterAlgorithm
 
setNeighborhood(Neighborhood3D) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.generate.FindParticles3DAlgorithm
 
setNeighborhood(Neighborhood2D) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
setNetAverage(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationTweaksSettings
 
setNetAverage(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationEnhancementSettings_Old
Deprecated.
 
setNetAverage(boolean) - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationTweaksSettings
 
setNeverAskOnClosingTabs(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
setNewColumnName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.UnMeltTableAlgorithm
 
setNewEdgeColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
setNewEdgeColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
setNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameter
Adds a new instance of the content class Override this method for types that cannot be default-constructed
setNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.colors.OptionalColorMapParameter
 
setNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.colors.OptionalColorParameter
 
setNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalBooleanParameter
 
setNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalByteParameter
 
setNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalDoubleParameter
 
setNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalFloatParameter
 
setNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalIntegerParameter
 
setNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalLongParameter
 
setNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalPathParameter
 
setNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalShortParameter
 
setNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.optional.OptionalStringParameter
 
setNewInstanceGenerator(Function<JIPipeDataSlotInfo, Object>) - Method in class org.hkijena.jipipe.extensions.parameters.api.graph.SlotMapParameterCollection
 
setNewLabelColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm
 
setNewLocationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ReorderHyperstackSlicesExpressionAlgorithm
 
setNewName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumns2Algorithm.RenamingEntry
 
setNode(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
Reassigns the node
setNode(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
setNode(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
setNodeAliasIDAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.ExtractParametersAlgorithm
 
setnodeClass(Class<? extends JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
Sets the algorithm class
setNodeExpandedState(JTree, DefaultMutableTreeNode, boolean) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
setNodeGridSize(int, int) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeAnnotationGraphNodeUI
 
SetNodeHotkeyContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
SetNodeHotkeyContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SetNodeHotkeyContextAction
 
setNodeId(String) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm
 
setNodeNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.ExtractParametersAlgorithm
 
setNodes(Set<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.looping.LoopGroup
 
setNodeTemplateDownloadRepositories(StringList) - Method in class org.hkijena.jipipe.extensions.settings.NodeTemplateSettings
 
setNodeTemplates(JIPipeNodeTemplate.List) - Method in class org.hkijena.jipipe.api.JIPipeProjectMetadata
 
setNodeTemplates(JIPipeNodeTemplate.List) - Method in class org.hkijena.jipipe.extensions.settings.NodeTemplateSettings
 
setNodeUUIDAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.ExtractParametersAlgorithm
 
setNoInterpolate(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Reslicer
 
setNoInterpolation(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ResliceAlgorithm
 
setNoise(float) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.FindMaxima3DAlgorithm
 
setNoLUT(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEExporterSettings
 
setNonSpatialLocation(NonSpatialPoint3d) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
setNormalize(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationTweaksSettings
 
setNormalize(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationEnhancementSettings_Old
Deprecated.
 
setNormalize(double) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.SymmetryFilter3DAlgorithm
 
setNormalize(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve.ConvolveByImage2DAlgorithm
 
setNormalize(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve.ConvolveByParameter2DAlgorithm
 
setNormalize(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap2DAlgorithm
 
setNormalize(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap3DAlgorithm
 
setNormalize(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.GeodesicDistanceMap2DAlgorithm
 
setNormalize(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.LabelChamferDistanceMap3DAlgorithm
 
setNormalize(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.HistogramGenerator
 
setNormalize(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator
 
setNormalize(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm
 
setNormalize(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
setNormalizeContrast(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm
 
setNormals(float[]) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DIndexedMeshGeometry
 
setNormals(float[]) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DUnindexedMeshGeometry
 
setNormalsIndex(int[]) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DIndexedMeshGeometry
 
setNotifications(JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
setNotifyInvalidDragAndDrop(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setNoWindows(boolean) - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters
 
setNoWindows(OptionalBooleanParameter) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
setNuclearChannel(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
setNuclearChannel(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeChannelSettings
 
setNumBins(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm
 
setNumBins(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
setNumDataAnnotationColumns(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.AnnotateWithDataTableProperties
 
setNumEpochs(int) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
setNumEpochs(int) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
setNumEpochs(int) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
setNumIncompleteOptional(int) - Method in class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
setNumIncompleteRequired(int) - Method in class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
setNumIterationSteps(int) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMutableIterationContext
 
setNumMerging(int) - Method in class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
setNumRows(int) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon
Sets the number of rows Will not rebuild the ribbon!
setNumRowsAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.AnnotateWithDataTableProperties
 
setNumScales(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.FrangiVesselnessFeatures
 
setNumTextAnnotationColumns(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.AnnotateWithDataTableProperties
 
setNumThreads(int) - Method in class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration
 
setNumThreads(int) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
setNumThreads(int) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersAlgorithm
 
setNumThreads(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaClassification2DAlgorithm
 
setNumThreads(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaClassification3DAlgorithm
 
setNumThreads(int) - Method in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmWindow
 
setNumThreads(int) - Method in class org.hkijena.jipipe.ui.quickrun.QuickRunSettings
 
setNumTilesX(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
setNumTilesX(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
setNumTilesY(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
setNumTilesY(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
setObject3D(Object3D) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
setOffset(LongList) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.PairOfPointsImageJ2ShapeData
 
setOldLabelColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ReplaceLabelsByTableAlgorithm
 
setOneBasedPositions(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm
 
setOneBasedPositions(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
 
setOnlyActiveImage(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ImagePlusFromGUI
 
setOnlyFirst(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.annotations.RoiPropertiesToAnnotationsAlgorithm
 
setOnlyIfPossible(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnToNumericAlgorithm
 
setOnlyPinned(boolean) - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
setOnlySameComponent(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.RemoveDuplicateVerticesAlgorithm
 
setOpacity(double) - Method in class org.hkijena.jipipe.extensions.ij3d.utils.Roi3DDrawer
 
setOpacity(double) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
setOpacity(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.OverlayImagesAlgorithm.Channel
Deprecated.
 
setOpacity(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
setOpacity(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
setOpacity(double) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageBlendLayer
 
setOpacity(double) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
setOpacityStep(double) - Method in class org.hkijena.jipipe.ui.components.icons.AnimatedIcon
 
setOpaque(boolean) - Method in class org.hkijena.jipipe.ui.components.FormPanel
 
setOpaqueTextures(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.MultiOrthoSlicerSettings
 
setOpenAllSeries(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
setOpenDataWindowsAlwaysOnTop(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
setOpenTabs(List<String>) - Method in class org.hkijena.jipipe.ui.project.JIPipeProjectTabMetadata
 
setOpenUtilityWindowsAlwaysOnTop(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
setOperation(LogicalOperation) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ROI3DCalculatorAlgorithm
 
setOperation(DirectionalFilter.Operation) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm
 
setOperation(ImageCalculator2DAlgorithm.Operation) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DAlgorithm
 
setOperation(ImageCalculator2DAlgorithm.Operation) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DMergingAlgorithm
 
setOperation(ImageComparer2DAlgorithm.Operation) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm
 
setOperation(GrayscaleAttributeFiltering2DAlgorithm.Operation) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm
 
setOperation(GrayscaleAttributeFiltering3DAlgorithm.Operation) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm
 
setOperation(Morphology.Operation) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm
 
setOperation(Morphology.Operation) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm
 
setOperation(MorphologyBinary2DAlgorithm.Operation) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm
 
setOperation(LogicalOperation) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiCalculatorAlgorithm
 
setOptional(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
setOptionPanelContent(Component) - Method in class org.hkijena.jipipe.ui.ijupdater.ManagerUI
 
setOrder(int) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
setOrder(int) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExtractParent
 
setOrderExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm
Deprecated.
 
setOrderExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2
 
setOriginalBitDepth(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo
 
setOriginalHeight(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo
 
setOriginalProjectPath(String) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItem
 
setOriginalWidth(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo
 
setOutline(ROI3DOutline) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process.OutlineRoi3DAlgorithm
 
setOutline(RoiOutline) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.RemoveBorderRoisAlgorithm
 
setOutline(RoiOutline) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.OutlineRoiAlgorithm
 
setOutput(O) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter
 
setOutput32bit(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm
 
setOutputAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.forms.utils.SingleAnnotationIOSettings
 
setOutputBackgroundColumn(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator
 
setOutputBackgroundColumn(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator
 
setOutputBackgroundColumn(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator
 
setOutputBlockwiseObjectPredictions(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters
 
setOutputBlockwiseObjectPredictions(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters
 
setOutputBlockwiseObjectPredictions(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters
 
setOutputBlockwiseObjectProbabilities(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters
 
setOutputBlockwiseObjectProbabilities(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters
 
setOutputBlockwiseObjectProbabilities(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters
 
setOutputBranchTable(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters
 
setOutputCategoryColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.MeltTableAlgorithm
 
setOutputColumnBinCount(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
setOutputColumnBinMax(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
setOutputColumnBinMin(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
setOutputDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
 
setOutputDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.CreateStackAlgorithm
 
setOutputDirectory(Path) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter
 
setOutputDirectory(Path) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataTableByParameter
 
setOutputDirectory(Path) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.ExportROI3DAlgorithm
Deprecated.
 
setOutputDirectory(Path) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
setOutputDirectory(Path) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportROIAlgorithm
Deprecated.
 
setOutputDirectory(Path) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm
Deprecated.
 
setOutputDirectory(Path) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm
Deprecated.
 
setOutputDirectory(Path) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.BioFormatsExporter
Deprecated.
 
setOutputDirectory(Path) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.ExportScene3DToColladaAlgorithm
Deprecated.
 
setOutputEmptyLists(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByStatisticsAlgorithm
 
setOutputEmptyLists(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm
 
setOutputEmptyLists(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm
 
setOutputEmptyLists(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByStatisticsAlgorithm
 
setOutputEmptyLists(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm
 
setOutputFeatures(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters
 
setOutputFeatures(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters
 
setOutputFeatures(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters
 
setOutputFeatures(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters
 
setOutputFeaturesStage1(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
setOutputFeaturesStage2(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
setOutputFile(String) - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderPackage
 
setOutputFiles(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.FilterPaths
 
setOutputFlows(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationOutputSettings_Old
Deprecated.
 
setOutputFlowsD(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationOutputSettings
 
setOutputFlowsXY(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationOutputSettings
 
setOutputFlowsZ(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationOutputSettings
 
setOutputFolders(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.FilterPaths
 
setOutputForegroundColumn(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator
 
setOutputForegroundColumn(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator
 
setOutputForegroundColumn(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator
 
setOutputImageType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.MatrixToImageAlgorithm
 
setOutputImageType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableToImageAlgorithm
 
setOutputInputStage1(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
setOutputInputStage2(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
setOutputKeyColumn(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator
 
setOutputKeyColumn(String) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm
 
setOutputLabels(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationOutputSettings
 
setOutputLabels(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationOutputSettings_Old
Deprecated.
 
setOutputLabels(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters
 
setOutputLabelsStage1(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
setOutputLabelsStage2(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
setOutputLargestShortestPaths(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters
 
setOutputMatchedTemplates(boolean) - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
setOutputNode(JIPipeCompartmentOutput) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
Sets the compartment output.
setOutputNonExisting(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.FilterPaths
 
setOutputObjectPredictions(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters
 
setOutputObjectPredictions(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters
 
setOutputObjectPredictions(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters
 
setOutputObjectProbabilities(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters
 
setOutputObjectProbabilities(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters
 
setOutputObjectProbabilities(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters
 
setOutputOutputFolder(boolean) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessIteratingAlgorithm
 
setOutputOutputFolder(boolean) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessMergingAlgorithm
 
setOutputOverlaps(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
setOutputOverlaps(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings
 
setOutputOverlaps(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
setOutputPath(Path) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
Sets the output path
setOutputPath(Path) - Method in class org.hkijena.jipipe.ui.quickrun.QuickRunSettings
 
setOutputPixelProbabilities(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm.OutputParameters
 
setOutputPixelProbabilities(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm.OutputParameters
 
setOutputPixelProbabilities(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm.OutputParameters
 
setOutputPolarCoordinates(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm
 
setOutputPolarCoordinates(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm
 
setOutputPolarCoordinates(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm
 
setOutputProbabilities(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationOutputSettings
 
setOutputProbabilities(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationOutputSettings_Old
Deprecated.
 
setOutputProbabilities(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters
 
setOutputProbabilitiesAllStages(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
setOutputProbabilitiesStage1(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
setOutputProbabilitiesStage2(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
setOutputProbabilityMaps(boolean) - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaClassification2DAlgorithm
 
setOutputProbabilityMaps(boolean) - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.WekaClassification3DAlgorithm
 
setOutputROI(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationOutputSettings
 
setOutputROI(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationOutputSettings_Old
Deprecated.
 
setOutputRoi(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm
 
setOutputSealed(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Seals/Unseals output slots
setOutputSettings(JIPipeRuntimePartition.OutputSettings) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
setOutputSimpleSegmentation(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters
 
setOutputSimpleSegmentationStage1(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
setOutputSimpleSegmentationStage2(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
setOutputSkeletonLabels(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters
 
setOutputSkeletonTable(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters
 
setOutputSlots(List<AddJIPipeOutputSlot>) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
Sets the output slots
setOutputStyles(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationOutputSettings_Old
Deprecated.
 
setOutputTable(JIPipeDataTable) - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation.ImportDataRun
 
setOutputTaggedSkeletons(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters
 
setOutputThresholdColumn(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.AverageKeyValueThresholdStatisticsGenerator
 
setOutputThresholdColumn(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.FastKeyValueThresholdStatisticsGenerator
 
setOutputThresholdColumn(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdStatisticsGenerator
 
setOutputType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling2DAlgorithm
 
setOutputType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConnectedComponentsLabeling3DAlgorithm
 
setOutputType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.ColorToGreyscaleExpression2D
 
setOutputType(LocalMaxima2DAlgorithm.OutputType) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm
 
setOutputType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyColorMathExpression2DExpression
 
setOutputType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap2DAlgorithm
 
setOutputType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ChamferDistanceMap3DAlgorithm
 
setOutputType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.GeodesicDistanceMap2DAlgorithm
 
setOutputType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.LabelChamferDistanceMap3DAlgorithm
 
setOutputType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImageTypeConverter
 
setOutputUncertainty(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm.OutputParameters
 
setOutputUncertaintyStage1(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
setOutputUncertaintyStage2(boolean) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm.OutputParameters
 
setOutputValueColumn(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator
 
setOutputValueColumn(String) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm
 
setOutputValueColumnName(String) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.MeltTableAlgorithm
 
setOutputVectorSize(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm
 
setOutputWarnings(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
setOutsideColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
setOverlapFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
setOverlapFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
setOverlapFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm.LabelFilterSettings
 
setOverlapFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm.ROIFilterSettings
 
setOverlapFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
setOverlapFilterMeasurements(ROI3DRelationMeasurementSetParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm
 
setOverlapFilterMeasurements(ROI3DRelationMeasurementSetParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
setOverlapFilterMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByOverlapAlgorithm
 
setOverlapFilterMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIByOverlapAlgorithm
 
setOverlapFilterMeasurements(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
setOverlapResolution(OverlapOption) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
setOverlapX(int) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling2DSettings
 
setOverlapX(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
setOverlapX(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
setOverlapY(int) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling2DSettings
 
setOverlapY(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
setOverlapY(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
SetOverlay3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.overlay
 
SetOverlay3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.overlay.SetOverlay3DAlgorithm
 
SetOverlay3DAlgorithm(SetOverlay3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.overlay.SetOverlay3DAlgorithm
 
SetOverlayAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay
 
SetOverlayAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.SetOverlayAlgorithm
 
SetOverlayAlgorithm(SetOverlayAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.SetOverlayAlgorithm
 
setOverlays(List<JIPipeData>) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
Sets overlay data
setOverriddenParameters(StringQueryExpressionAndStringPairParameter.List) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
setOverrideArguments(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessIteratingAlgorithm
 
setOverrideArguments(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessMergingAlgorithm
 
setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMERODatasetReferenceAlgorithm
 
setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROImageReferenceAlgorithm
 
setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.extensions.omero.nodes.annotate.AnnotateOMEROProjectReferenceAlgorithm
 
setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMERODatasetReferenceDataSource
 
setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROImageReferenceDataSource
 
setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROProjectReferenceDataSource
 
setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROImageAlgorithm
 
setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROTableAlgorithm
 
setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.extensions.omero.nodes.manage.OMEROCreateDatasetAlgorithm
 
setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListDatasetsAlgorithm
 
setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListGroupsAlgorithm
 
setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListImagesAlgorithm
 
setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.extensions.omero.nodes.navigate.OMEROListProjectsAlgorithm
 
setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROImageAlgorithm
 
setOverrideCredentials(OptionalOMEROCredentialsEnvironment) - Method in class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROTableAlgorithm
 
setOverrideEdgeColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
setOverrideEdgeColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
setOverrideEdgeRadius(OptionalFloatParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
setOverrideEdgeThickness(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeAlgorithm
 
setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeAlgorithm_Old
Deprecated.
 
setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
setOverrideEnvironment(OptionalProcessEnvironment) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
setOverrideEnvironment(OptionalProcessEnvironment) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
setOverrideEnvironment(OptionalProcessEnvironment) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm
 
setOverrideEnvironment(OptionalProcessEnvironment) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
setOverrideEnvironment(OptionalProcessEnvironment) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeAlgorithm
 
setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.extensions.python.algorithms.IteratingPythonScriptAlgorithm
 
setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.extensions.python.algorithms.MergingPythonScriptAlgorithm
 
setOverrideEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.extensions.python.algorithms.PythonScriptAlgorithm
 
setOverrideEnvironment(OptionalPathParameter) - Method in class org.hkijena.jipipe.extensions.python.installers.SelectCondaEnvPythonInstaller.Configuration
 
setOverrideEnvironment(OptionalREnvironment) - Method in class org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm
 
setOverrideEnvironment(OptionalREnvironment) - Method in class org.hkijena.jipipe.extensions.r.algorithms.IteratingRScriptAlgorithm
 
setOverrideEnvironment(OptionalREnvironment) - Method in class org.hkijena.jipipe.extensions.r.algorithms.MergingRScriptAlgorithm
 
setOverrideFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.utils.Roi3DDrawer
 
setOverrideFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
setOverrideFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
setOverrideFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
setOverrideFillColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
setOverrideLineColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
setOverrideLineColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
setOverrideLineColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
setOverrideLineColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
setOverrideLineWidth(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
setOverrideLineWidth(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
setOverrideLineWidth(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
setOverrideLineWidth(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiDrawer
 
setOverrideMeshColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm
 
setOverridePythonEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.extensions.cellpose.CellposeSettings
 
setOverridePythonEnvironment(OptionalPythonEnvironment) - Method in class org.hkijena.jipipe.extensions.omnipose.OmniposeSettings
 
setOverrideResamplingFactor(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.Image3DRendererSettings
 
setOverrideVertexColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
setOverrideVertexColor(OptionalColorParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
setOverrideVertexRadius(OptionalFloatParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
setOverrideVertexRadius(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentsDrawer
 
setOverwriteHeight(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
 
setOverwriteHeight(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingZeroImage
 
setOverwriteOutputBitDepth(OptionalBitDepth) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
 
setOverwriteOutputBitDepth(OptionalBitDepth) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingZeroImage
 
setOverwriteSizeC(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawMaskAlgorithm
 
setOverwriteSizeC(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawROIAlgorithm
 
setOverwriteSizeC(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
 
setOverwriteSizeC(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingZeroImage
 
setOverwriteSizeT(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawMaskAlgorithm
 
setOverwriteSizeT(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawROIAlgorithm
 
setOverwriteSizeT(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
 
setOverwriteSizeT(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingZeroImage
 
setOverwriteSizeZ(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawMaskAlgorithm
 
setOverwriteSizeZ(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawROIAlgorithm
 
setOverwriteSizeZ(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
 
setOverwriteSizeZ(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingZeroImage
 
setOverwriteWidth(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
 
setOverwriteWidth(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingZeroImage
 
setP(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm
 
setPadded(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEExporterSettings
 
setParameter(String, Object) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection
Sets a parameter and triggers the associated events
setParameter(P) - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter
 
setParameter(Object, boolean) - Method in class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
Sets the parameter value.
setParameter(JIPipeParameterCollection, String, Object) - Static method in class org.hkijena.jipipe.utils.ParameterUtils
Sets a parameter of a JIPipeParameterCollection and triggers the associated events
setParameterAnnotationsPrefix(String) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings
 
setParameterAnnotationsPrefix(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
setParameterAnnotationsUseInternalNames(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithmSettings
 
setParameterAnnotationsUseInternalNames(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
setParameterData(Map<String, Object>) - Method in class org.hkijena.jipipe.extensions.multiparameters.datatypes.ParametersData
 
setParameterKeyFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.ExtractParametersAlgorithm
 
setParameterReferenceGroups(List<GraphNodeParameterReferenceGroup>) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection
 
setParameters(ImageJExportParameters) - Method in class org.hkijena.jipipe.api.compat.ImageJDataExportOperation
Sets arbitrary string data that can be used by the adapter for the conversion
setParameters(BiMap<String, JIPipeParameterAccess>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
setParameters(JIPipeDynamicParameterCollection) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OMEAccessorParameter
 
setParameters(int, int, int, int, int, double, int, double, int, int, boolean, boolean, boolean, boolean, boolean, boolean, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Hough_Circle
Import values from GUI class before starting the analysis thread
setParametersData(ParametersData) - Method in class org.hkijena.jipipe.extensions.multiparameters.datatypes.ParametersDataViewer
 
setParameterTable(ParameterTable) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersTableAlgorithm
 
setParent(NodeGroup) - Method in class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents
 
setParent(JIPipeParameterTree) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Sets the parent of this tree.
setParent(AnalyzeSkeleton2D3DAlgorithm) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.OutputParameters
 
setParent(JIPipeGraphNode) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.GeneratedParameters
 
setParent(View) - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Establishes the parent view for this view.
setParent(Component) - Method in class org.hkijena.jipipe.ui.components.icons.AnimatedIcon
 
setParent(Component) - Method in class org.hkijena.jipipe.ui.components.icons.NewThrobberIcon
 
setParentGraph(JIPipeGraph) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Sets the graph this algorithm is location in.
setParentPath(Path) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.RelativizeByParameter
Sets the subfolder
setParentPathAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotateWithPathProperties
 
setPassThrough(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
 
setPassword(PasswordParameter) - Method in class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment
 
setPassword(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.auth.PasswordParameter
 
setPath(String) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReference
 
setPath(Path) - Method in class org.hkijena.jipipe.api.JIPipeProjectDirectories.DirectoryEntry
 
setPath(Path) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathDataSource
Sets the file name
setPath(String) - Method in class org.hkijena.jipipe.extensions.filesystem.dataypes.PathData
 
setPath(Path) - Method in class org.hkijena.jipipe.extensions.filesystem.dataypes.PathData
 
setPath(Path) - Method in class org.hkijena.jipipe.extensions.parameters.library.filesystem.FileChooserBookmark
 
setPath(Path) - Method in class org.hkijena.jipipe.ui.components.PathEditor
 
setPathIOMode(PathIOMode) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathFromUserDataSource
 
setPathMode(PathType) - Method in class org.hkijena.jipipe.ui.components.PathEditor
 
setPathName(String) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.RenameByString
Sets the subfolder
setPaths(PathList) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathListDataSource
Sets the folder path
setPathType(PathType) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.PathFromUserDataSource
 
setPathType(PathType) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
setPenalty(double) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeaturePenaltyParameter
 
setPercent(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.AddSaltAndPepperNoise2DAlgorithm
 
setPercentile(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.PercentileThreshold8U2DAlgorithm
 
setPermissions(JIPipeProjectPermissions) - Method in class org.hkijena.jipipe.api.JIPipeProjectMetadata
 
setPersistence(JIPipeParameterSerializationMode) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
setPersistence(JIPipeParameterSerializationMode) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
setPersistence(JIPipeParameterSerializationMode) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
setPerSlotStatus(ResultsTableData) - Method in class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
SetPhysicalDimensionsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration
 
SetPhysicalDimensionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm
 
SetPhysicalDimensionsAlgorithm(SetPhysicalDimensionsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm
 
SetPhysicalDimensionsByAnnotationsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration
 
SetPhysicalDimensionsByAnnotationsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm
 
SetPhysicalDimensionsByAnnotationsAlgorithm(SetPhysicalDimensionsByAnnotationsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm
 
SetPhysicalDimensionsByExpressionsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration
 
SetPhysicalDimensionsByExpressionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm
 
SetPhysicalDimensionsByExpressionsAlgorithm(SetPhysicalDimensionsByExpressionsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm
 
setPhysicalDimensionT(OptionalQuantity) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm
 
setPhysicalDimensionT(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm
 
setPhysicalDimensionT(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm
 
setPhysicalDimensionTAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
setPhysicalDimensionValue(OptionalQuantity) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm
 
setPhysicalDimensionValue(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm
 
setPhysicalDimensionValue(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm
 
setPhysicalDimensionValueAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
setPhysicalDimensionX(OptionalQuantity) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm
 
setPhysicalDimensionX(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm
 
setPhysicalDimensionX(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm
 
setPhysicalDimensionXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
setPhysicalDimensionY(OptionalQuantity) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm
 
setPhysicalDimensionY(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm
 
setPhysicalDimensionY(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm
 
setPhysicalDimensionYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
setPhysicalDimensionZ(OptionalQuantity) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsAlgorithm
 
setPhysicalDimensionZ(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByAnnotationsAlgorithm
 
setPhysicalDimensionZ(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.SetPhysicalDimensionsByExpressionsAlgorithm
 
setPhysicalDimensionZAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
setPhysicalSizes(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm
 
setPhysicalSizes(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
setPhysicalSizes(boolean) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.MaskTo3DMeshAlgorithm
 
setPhysicalSizeX(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
setPhysicalSizeY(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
setPhysicalSizeZ(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
setPhysicalVoxelSizeX(Quantity) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
setPhysicalVoxelSizeY(Quantity) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
setPhysicalVoxelSizeZ(Quantity) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
setPinned(boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
setPixelThreshold(OptionalFloatParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.LinesHoughDetection2DAlgorithm
 
setPlaceholderAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.UsePlaceholderForMissingDataAlgorithm
 
setPlaceholderTable(ResultsTableData) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm
Deprecated.
 
setPlaceholderTable(ResultsTableData) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingTablesAlgorithm2
 
setPlaneNumberAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
setPlaneStartLocation(Anchor) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ResliceAlgorithm
 
setPlotNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
setPlotType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTablesAlgorithm
Deprecated.
 
setPlotType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
 
setPluginInfo(PluginInfo<JIPipeJavaPlugin>) - Method in class org.hkijena.jipipe.JIPipeJavaExtensionInitializationInfo
 
setPlugins(List<JIPipePlugin>) - Method in class org.hkijena.jipipe.ui.extensions.ExtensionListPanel
 
setPolarCoordinates(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.Warp2DAlgorithm
 
setPort(int) - Method in class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment
 
setPosition(float) - Method in class org.hkijena.jipipe.utils.ColorUtils.GradientStop
 
setPositionC(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.ROIProperties
 
setPositionC(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
setPositionC(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
setPositionC(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
setPositionC(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
setPositionT(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.ROIProperties
 
setPositionT(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
setPositionT(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
setPositionT(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
setPositionT(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
setPositionX(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
setPositionX(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
setPositionX(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
setPositionX(double) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
setPositionY(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
setPositionY(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
setPositionY(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
setPositionY(double) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
setPositionZ(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.ROIProperties
 
setPositionZ(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
setPositionZ(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
setPositionZ(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
setPositionZ(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
setPowerSpectrumMean(double) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo
 
setPreActivationIssues(Map<String, JIPipeValidationReport>) - Method in class org.hkijena.jipipe.JIPipeRegistryIssues
 
setPreciseColocalization(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
setPreciseColocalization(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm
 
setPreciseColocalization(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
setPreciseColocalization(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm
 
setPredecessors(Set<String>) - Method in class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext
 
setPredictionMapsDataAnnotation(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
setPreDownloadedArchivePath(OptionalPathParameter) - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller.Configuration
 
setPreferAssociatedImage(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm
 
setPreferAssociatedImage(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
 
setPreferCustomDownloader(boolean) - Method in class org.hkijena.jipipe.extensions.settings.DownloadSettings
 
setPreferIsotropicFilter(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersAlgorithm
 
setPreferRenderViaOverlay(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.overlay.RenderOverlayAlgorithm
 
setPreferRenderViaOverlay(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.RoiToRGBAlgorithm
 
setPrefix(String) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.TemporaryFileDataSource
 
setPreprocessingScript(PythonScript) - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelIterating
 
setPreprocessingScript(PythonScript) - Method in class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelSimpleIterating
 
setPreprocessor(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.AnnotateWithTextDataAlgorithm.Entry
 
setPreprocessor(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.TextDataToTableAlgorithm.Entry
 
setPresets(OMEROCredentialsEnvironment.List) - Method in class org.hkijena.jipipe.extensions.omero.OMEROSettings
 
setPresets(ProcessEnvironment.List) - Method in class org.hkijena.jipipe.extensions.processes.ProcessesExtensionSettings
 
setPresets(PythonEnvironment.List) - Method in class org.hkijena.jipipe.extensions.python.PythonExtensionSettings
 
setPresets(REnvironment.List) - Method in class org.hkijena.jipipe.extensions.r.RExtensionSettings
 
setPresetsListInterface(List<JIPipeEnvironment>, Class<?>) - Method in interface org.hkijena.jipipe.api.environments.ExternalEnvironmentSettings
Sets the presets This is an interface class for easy access
setPresetsListInterface(List<JIPipeEnvironment>, Class<?>) - Method in class org.hkijena.jipipe.extensions.omero.OMEROSettings
 
setPresetsListInterface(List<JIPipeEnvironment>, Class<?>) - Method in class org.hkijena.jipipe.extensions.processes.ProcessesExtensionSettings
 
setPresetsListInterface(List<JIPipeEnvironment>, Class<?>) - Method in class org.hkijena.jipipe.extensions.python.adapter.PythonAdapterExtensionSettings
 
setPresetsListInterface(List<JIPipeEnvironment>, Class<?>) - Method in class org.hkijena.jipipe.extensions.python.PythonExtensionSettings
 
setPresetsListInterface(List<JIPipeEnvironment>, Class<?>) - Method in class org.hkijena.jipipe.extensions.r.RExtensionSettings
 
setPreSmoothing(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm
 
setPretrainedModel(CellposePretrainedModel) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
setPretrainedModel(CellposePretrainedModel) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
setPretrainedModel(OmniposePretrainedModel) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
setPreventAddingDeletingNodes(boolean) - Method in class org.hkijena.jipipe.api.JIPipeProjectPermissions
 
setPreventModifyingSlots(boolean) - Method in class org.hkijena.jipipe.api.JIPipeProjectPermissions
 
setPreventUpdateSlots(boolean) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
setPreviewHeight(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.misc.DataToPreviewAlgorithm
 
setPreviewSize(int) - Method in class org.hkijena.jipipe.extensions.settings.GeneralDataSettings
 
setPreviewWidth(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.misc.DataToPreviewAlgorithm
 
setPriority(double) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
Sets the priority
setPriority(double) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
setPriority(double) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
setPriority(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageBlendLayer
 
setProcessEnvironment(ProcessEnvironment) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessIteratingAlgorithm
 
setProcessEnvironment(ProcessEnvironment) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.processes.RunProcessMergingAlgorithm
 
setProcessing3D(boolean) - Method in class org.hkijena.jipipe.extensions.ijweka.datatypes.WekaModelData.Metadata
 
setProcessing3D(boolean) - Method in class org.hkijena.jipipe.extensions.ijweka.nodes.ImportWekaModelFromFileAlgorithm
 
setProcessorParameters(ExpressionTableColumnProcessorParameterList) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ApplyExpressionToColumnsAlgorithm
 
setProcessorParameters(ConvertingTableColumnProcessorParameterList) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ConvertColumnsAlgorithm
 
setProcessorParameters(IntegratingTableColumnProcessorParameterList) - Method in class org.hkijena.jipipe.extensions.tables.nodes.IntegrateColumnsAlgorithm
 
setProgress(int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
setProgress(int, int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
Sets the progress and max progress
setProgress(double) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.JIPipeLogger
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.AbstractJIPipeRunnable
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation.ImportDataRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstaller
 
setProgressInfo(JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.JIPipeRunnable
Sets the progress info of this runnable
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImagePlusResultImportRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.OMEImageResultImportRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.RawImage2DExporterRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Stack2DExporterRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imageviewer.runs.Video2DExporterRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.pipelinerender.RenderPipelineRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.python.installers.SelectCondaEnvPythonInstaller
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.python.installers.SelectSystemPythonInstaller
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.python.installers.SelectVirtualEnvPythonInstaller
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.r.installers.REnvInstaller
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.ArchiveProjectRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToFilesByMetadataExporterRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToOutputExporterRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToZIPExporterRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.cache.importers.JIPipeImportCachedSlotOutputRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.documentation.DownloadOfflineManualRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.extensions.ActivateAndApplyUpdateSiteRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.extensions.DeactivateAndApplyUpdateSiteRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.ExtractTemplateZipFileRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.ijupdater.ActivateUpdateSiteRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.ijupdater.ApplyRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.ijupdater.RefreshRepositoryRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.project.LoadResultDirectoryIntoCacheRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.project.LoadResultZipIntoCacheRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.project.SaveProjectAndCacheToDirectoryRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.project.SaveProjectAndCacheToZipRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.quickrun.QuickRun
 
setProgressInfo(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun
 
setProject(JIPipeProject) - Method in class org.hkijena.jipipe.ui.settings.JIPipeProjectInfoParameters
 
setProjectAllHyperstackTimePoints(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm
 
setProjectDirectory(Path) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
setProjectDirectory(Path) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Sets the project directory.
setProjectedAxis(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm
 
setProjectFile(Path) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.RunJIPipeProjectAlgorithm
 
setProjectId(long) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROProjectReferenceData
 
setProjectIds(LongList) - Method in class org.hkijena.jipipe.extensions.omero.nodes.datasources.OMEROProjectReferenceDataSource
 
setProjectModified(boolean) - Method in class org.hkijena.jipipe.ui.compat.RunSingleAlgorithmWindow
 
setProjectModified(boolean) - Method in class org.hkijena.jipipe.ui.ijupdater.MissingRegistrationUpdateSiteResolver
 
setProjectModified(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeDummyWorkbench
 
setProjectModified(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWorkbench
 
setProjectModified(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
setProjectModified(boolean) - Method in interface org.hkijena.jipipe.ui.JIPipeWorkbench
Sets the modification state of the project
setProjectPath(Path) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItem
 
setProjectSessionId(String) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupSessionInfo
 
setProjectStoragePath(String) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupSessionInfo
 
setProjectTemplate(ProjectsSettings.ProjectTemplateEnum) - Method in class org.hkijena.jipipe.extensions.settings.ProjectsSettings
 
setProjectTemplateDownloadRepositories(StringList) - Method in class org.hkijena.jipipe.extensions.settings.ProjectsSettings
 
setProjectValidationMode(IlastikProjectValidationMode) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm
 
setProjectValidationMode(IlastikProjectValidationMode) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikObjectClassificationAlgorithm
 
setProjectValidationMode(IlastikProjectValidationMode) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm
 
setProjectValidationMode(IlastikProjectValidationMode) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPredictionMapsObjectClassificationAlgorithm
 
setProjectValidationMode(IlastikProjectValidationMode) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
setPropertiesFromAttributes() - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Update any cached values that come from attributes.
setPropertyPanel(Component, boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
Sets the component displayed in the right property panel
setProvidedByEnvironment(boolean) - Method in class org.hkijena.jipipe.extensions.python.PythonPackageLibraryEnvironment
 
setPruneCyclesMethod(AnalyzeSkeleton2D3DAlgorithm.CycleRemovalMethod) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.SkeletonToSimplifiedFilamentsFijiAlgorithm
 
setPruneCyclesMethod(AnalyzeSkeleton2D3DAlgorithm.CycleRemovalMethod) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm
 
setPruneEndsMethod(AnalyzeSkeleton2D3DAlgorithm.EndRemovalMethod) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.SkeletonToSimplifiedFilamentsFijiAlgorithm
 
setPruneEndsMethod(AnalyzeSkeleton2D3DAlgorithm.EndRemovalMethod) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm
 
setPsf(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
setPythonAdapterLibraryEnvironment(JIPipePythonAdapterLibraryEnvironment) - Method in class org.hkijena.jipipe.extensions.python.adapter.PythonAdapterExtensionSettings
 
setPythonAdapterPresets(JIPipePythonAdapterLibraryEnvironment.List) - Method in class org.hkijena.jipipe.extensions.python.adapter.PythonAdapterExtensionSettings
 
setPythonDownloadURL(String) - Method in class org.hkijena.jipipe.extensions.python.installers.BasicPortableEnvPythonInstaller.Configuration
 
setPythonEnvironment(PythonEnvironment) - Method in class org.hkijena.jipipe.extensions.python.PythonExtensionSettings
 
setPythonExecutable(Path) - Method in class org.hkijena.jipipe.extensions.python.installers.SelectSystemPythonInstaller.Configuration
 
setPyTorchPipPackage(String) - Method in class org.hkijena.jipipe.extensions.cellpose.installers.PortableCellposeGPUEnvInstaller.Configuration
 
setQ(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm
 
setQuadrantSwapNeeded(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo
 
setR(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm
 
setR(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm
 
setRadius(int) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.binary.Watershed3DSplittingAlgorithm
 
setRadius(int) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.SymmetryFilter3DAlgorithm
 
setRadius(float) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SeedSegmentationSettings
 
setRadius(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
setRadius(double) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
setRadius(long) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.DiamondImageJ2ShapeData
 
setRadius(long) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.DiamondTipsImageJ2ShapeData
 
setRadius(long) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HyperSphereImageJ2ShapeData
 
setRadius(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm
 
setRadius(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurFilter2DAlgorithm
 
setRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LaplacianOfGaussian2DAlgorithm
 
setRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateStructureElement2DAlgorithm
 
setRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateStructureElement3DAlgorithm
 
setRadius(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMaximumFilter2DAlgorithm
 
setRadius(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMinimumFilter2DAlgorithm
 
setRadius(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalVarianceFilter2DAlgorithm
 
setRadius(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.RemoveNaNFilter2DAlgorithm
 
setRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm
 
setRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm
 
setRadius(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyInternalGradient2DAlgorithm
 
setRadius(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm
 
setRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm
 
setRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm
 
setRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm
 
setRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm
 
setRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm
 
setRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm
 
setRadius(float) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint
 
setRadius0(float) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm
 
setRadius1(float) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm
 
setRadius2(float) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm
 
setRadiusIncrement(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
setRadiusX(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm
 
setRadiusX(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm
 
setRadiusX(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm
 
setRadiusX(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm
 
setRadiusX(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm
 
setRadiusX(float) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
setRadiusXY(float) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.FindMaxima3DAlgorithm
 
setRadiusY(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm
 
setRadiusY(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm
 
setRadiusY(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm
 
setRadiusY(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm
 
setRadiusY(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm
 
setRadiusY(float) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
setRadiusZ(float) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.FindMaxima3DAlgorithm
 
setRadiusZ(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm
 
setRadiusZ(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm
 
setRadiusZ(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm
 
setRadiusZ(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm
 
setRadiusZ(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm
 
setRadiusZ(float) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
setRatio(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ExpandLabelsAlgorithm
 
setRatio(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
setRatio(double) - Method in class org.hkijena.jipipe.utils.AutoResizeSplitPane.FixedRatio
 
setRatio(AutoResizeSplitPane.Ratio) - Method in class org.hkijena.jipipe.utils.AutoResizeSplitPane
 
setRDownloadURL(String) - Method in class org.hkijena.jipipe.extensions.r.installers.REnvInstaller.Configuration
 
setRead(boolean) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnableLogEntry
 
setReadyLabel(String) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
 
setRecalibrate(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.DivideByMaximumAlgorithm
 
setRecentJsonExtensionProjects(PathList) - Method in class org.hkijena.jipipe.extensions.settings.ProjectsSettings
 
setRecentProjects(PathList) - Method in class org.hkijena.jipipe.extensions.settings.ProjectsSettings
 
setRectangles(Margin.List) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawOvalRoiAlgorithm
 
setRectangles(Margin.List) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawRectangleRoiAlgorithm
 
setRectangles(Margin.List) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.AppendRectangularRoiAlgorithm
Deprecated.
 
setRectangles(RectangleList) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.DefineRectangularRoiAlgorithm
Deprecated.
 
setRectangles(Margin.List) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.ReferencedAppendRectangularRoiAlgorithm
Deprecated.
 
setRectangles(Margin.List) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.ReferencedDefineRectangularRoiAlgorithm
Deprecated.
 
setRecursive(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ListFiles
 
setRecursive(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ListSubfolders
 
setRecursiveFollowsLinks(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ListFiles
 
setRecursiveFollowsLinks(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ListSubfolders
 
setRedirectDocumentationTarget(FormPanel) - Method in class org.hkijena.jipipe.ui.components.FormPanel
 
setRedThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
setReferenceColumns(Set<String>) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
Sets the reference columns An empty list merges all data into one batch Setting it to null splits all data into a separate batch
setReferenceColumns(JIPipeColumMatching, StringQueryExpression) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
setReferenceColumns(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm
 
setReferenceTextAnnotationColumns(Set<String>) - Method in class org.hkijena.jipipe.api.JIPipeDataBatchGenerationResult
 
setRegexString(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtraction
 
setRegistry(JIPipe) - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionLoaderPlugin
 
setRegistry(JIPipe) - Method in class org.hkijena.jipipe.JIPipeDefaultJavaPlugin
 
setRegistry(JIPipe) - Method in interface org.hkijena.jipipe.JIPipeJavaPlugin
Sets the registry
setRegistry(JIPipe) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
Sets the registry instance
setReinterpret(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color.ColorSpaceConverterAlgorithm
 
setRelativeDistances(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEBlockFlowAlgorithm
 
setRelativeDistances(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.MSEGaussianFlowAlgorithm
 
setRelativeDistances(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.opticalflow.PMCCBlockFlowAlgorithm
 
setRelativeToProjectDir(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter
 
setRelativeToProjectDir(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataTableByParameter
 
setRelativeToProjectDir(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.ExportROI3DAlgorithm
Deprecated.
 
setRelativeToProjectDir(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm
Deprecated.
 
setRelativeToProjectDir(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportROIAlgorithm
Deprecated.
 
setRelativeToProjectDir(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm
Deprecated.
 
setRelativeToProjectDir(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm
Deprecated.
 
setRelativeToProjectDir(boolean) - Method in class org.hkijena.jipipe.extensions.scene3d.nodes.ExportScene3DToColladaAlgorithm
Deprecated.
 
setRelativizePaths(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.FilesystemExtensionSettings
 
setRememberSettings(boolean) - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToFilesByMetadataExporterRun.Settings
 
setRemoveColumn(boolean) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RemoveArrayAnnotationsAlgorithm
 
setRemoveDuplicates(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ExpressionSlicerAlgorithm
 
setRemoveExistingAnnotationsFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.OverwriteAnnotations
 
setRemoveExtensions(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.SimplePathAnnotationGenerator
 
setRemoveInX(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm
 
setRemoveInX(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.RemoveBorderFilaments
 
setRemoveInY(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm
 
setRemoveInY(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.RemoveBorderFilaments
 
setRemoveInZ(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.process.RemoveBorderRoi3DAlgorithm
 
setRemoveInZ(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.RemoveBorderFilaments
 
setRemoveLut(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
 
setRemoveLut(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ImagePlusFromFile
 
setRemoveNegativeValues(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm
 
setRemoveOutputAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ConvertToAnnotationTable
 
setRemoveOverlay(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ImagePlusFromFile
 
setRenameFunction(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.SimplifyAnnotationsAlgorithm
 
setRenamingEntries(StringQueryExpressionAndStringPairParameter.List) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameSingleColumnsAlgorithm
 
setRenamingEntries(ParameterCollectionList) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumns2Algorithm
 
setRenamingEntries(StringQueryExpressionAndStringPairParameter.List) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumnsAlgorithm
Deprecated.
 
setRenamingEntries(StringQueryExpressionAndStringQueryPairParameter.List) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumnsToAnnotationAlgorithm
 
setRenamingItems(StringQueryExpressionAndStringPairParameter.List) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RenameAnnotation
 
setRenamingItems(StringQueryExpressionAndStringPairParameter.List) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.RenameDataAnnotation
 
setRenderCursor(boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
setRendererStatus(ImageViewerPanel3D.RendererStatus) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
setRenderGreyscaleImages(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.BlendImagesAlgorithm
 
setRenderLabel(boolean) - Method in class org.hkijena.jipipe.extensions.pipelinerender.RenderPipelineRunSettings
 
setRenderOutsideEdges(boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
setRenderROIAsOverlay(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.settings.ImageViewerUIROI2DDisplaySettings
 
setRenderROIAsVolume(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ImageViewerUIROI3DDisplaySettings
 
setRenderShadow(boolean) - Method in class org.hkijena.jipipe.extensions.pipelinerender.RenderPipelineRunSettings
 
setRenderType(Image3DRenderType) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.Image3DRendererSettings
 
setReplaceIfExists(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.GenerateColumnAlgorithm
 
setReplacements(IntRangeAndIntegerPairParameter.List) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.ReplaceLabelsAlgorithm
 
setReport(JIPipeValidationReport) - Method in class org.hkijena.jipipe.ui.components.JIPipeValidityReportUI
 
setRequireColocalization(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DByOverlapAlgorithm.ROIFilterSettings
 
setRequireColocalization(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.measure.ExtractRoi3DRelationStatisticsAlgorithm
 
setRequireColocalization(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
setRequireColocalization(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.ExtractRoi2DRelationStatisticsAlgorithm
 
setRequireDirection(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
setResample(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationPerformanceSettings_Old
Deprecated.
 
setResizeLeftSidebar(boolean) - Method in class org.hkijena.jipipe.utils.AutoResizeSplitPane.DynamicSidebarRatio
 
setResolution(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
setResourceClass(Class<?>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
setRestoreAnnotations(boolean) - Method in class org.hkijena.jipipe.extensions.forms.algorithms.IteratingFormProcessorAlgorithm
 
setRestoreTabs(boolean) - Method in class org.hkijena.jipipe.api.JIPipeProjectMetadata
 
setRestoreTabs(boolean) - Method in class org.hkijena.jipipe.extensions.settings.ProjectsSettings
 
setRestrictToChannels(OptionalIntegerRange) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.RemoveLUTAlgorithm
 
setRestrictToChannels(OptionalIntegerRange) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorMapAlgorithm
 
setRestrictToChannels(OptionalIntegerRange) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm
 
setRestrictToChannels(OptionalIntegerRange) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromImageAlgorithm
 
setRestrictToIndices(OptionalIntegerRange) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm
 
setRestrictToROI(boolean) - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
setReverseSortOrder(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm
 
setReverseSortOrder(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.SortTableColumnsAlgorithm
 
setReverseSortOrder(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.SortTableRowsAlgorithm
 
setRExecutablePath(Path) - Method in class org.hkijena.jipipe.extensions.r.REnvironment
 
setRgbUseRender(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
setRight(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
 
setRight(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.InnerMargin
 
setRight(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
setRoi(Margin) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm
 
SetROI3DMetadataFromTableAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata
 
SetROI3DMetadataFromTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.SetROI3DMetadataFromTableAlgorithm
 
SetROI3DMetadataFromTableAlgorithm(SetROI3DMetadataFromTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.SetROI3DMetadataFromTableAlgorithm
 
setRoiCanvas(Roi, ImagePlus, ImageCanvas) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Uses reflection to manually set the canvas of a Roi Please note that the image of the Roi will be set.
setRoiComment(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
setRoiComment(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
setRoiDrawer(RoiDrawer) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.settings.ImageViewerUIROI2DDisplaySettings
 
setRoiFilterExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.FilteringParameters
 
SetRoiImageAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi
Wrapper around RoiManager
SetRoiImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SetRoiImageAlgorithm
Instantiates a new node type.
SetRoiImageAlgorithm(SetRoiImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SetRoiImageAlgorithm
Instantiates a new node type.
setRoiIndexColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.metadata.SetROI3DMetadataFromTableAlgorithm
 
setRoiIndexColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetROIMetadataFromTableAlgorithm
 
SetRoiMetadataByStatisticsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties
Wrapper around RoiManager
SetRoiMetadataByStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm
Instantiates a new node type.
SetRoiMetadataByStatisticsAlgorithm(SetRoiMetadataByStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm
Instantiates a new node type.
SetRoiMetadataByStatisticsAlgorithm.MetadataProperty - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties
 
SetROIMetadataFromTableAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties
 
SetROIMetadataFromTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetROIMetadataFromTableAlgorithm
 
SetROIMetadataFromTableAlgorithm(SetROIMetadataFromTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetROIMetadataFromTableAlgorithm
 
setRoiName(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesAlgorithm
 
setRoiName(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm
 
setRoiName(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode
 
setRoiName(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertTracksToRoiNode
 
setRoiName(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.ROIProperties
 
setRoiName(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
setRoiName(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
setRoiName(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
setRoiName(String) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
setRoiNameExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.LinesHoughDetection2DAlgorithm
 
setRoiProperties(Roi, Map<String, String>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Sets the properties of a Roi from a map
setRois(ROI3DListData) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
setRois(ROIListData) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedImagePlusDataViewerWindow.CustomDataLoader
 
setRois(ROIListData, boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
setRoiToLabelTransformation(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm
 
setRole(JIPipeDataSlotRole) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
setRollingBallRadius(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm
 
setRotate(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ResliceAlgorithm
 
setRotate(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Reslicer
 
setRotateTemplate(IntegerRange) - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
setRotationDirection(TransformRotate2DAlgorithm.RotationMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm
 
setRotationRange(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.register.RegisterRoiToImageByBrightnessAlgorithm
 
setRotations(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm
 
setRowCountAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.annotations.AnnotateByTablePropertiesAlgorithm
 
setRowGenerator(Supplier<List<Object>>) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
 
setRowList(List<JIPipeDataTableMetadataRow>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
Sets list of rows
setRowMergingStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.ColumnsToAnnotationsAlgorithm
 
setRowNormalization(TableColumnNormalization) - Method in class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSimpleAlgorithm
 
setRowNormalization(TableColumnNormalization) - Method in class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm
 
setRows(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
setRows(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.MontageToStackAlgorithm
 
setRows(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
setRowStorageFolder(Path) - Method in class org.hkijena.jipipe.api.data.JIPipeExportedDataAnnotation
 
setRScriptExecutablePath(Path) - Method in class org.hkijena.jipipe.extensions.r.REnvironment
 
setRunnable(boolean) - Method in class org.hkijena.jipipe.api.nodes.infos.JIPipeMutableNodeInfo
 
setRuntimePartition(RuntimePartitionReferenceParameter) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
 
setRuntimeProject(JIPipeProject) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
Sets the project.
setRuntimeProject(JIPipeProject) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
setRuntimeProject(JIPipeProject) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Sets the current project associated with the current run
setSaturatedPixels(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm
 
setSaturationThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
setSaveRGBWithImageJ(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesSettings
 
setSaveROI(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEExporterSettings
 
setSaveToDisk(boolean) - Method in class org.hkijena.jipipe.ui.quickrun.QuickRunSettings
 
setScale(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.InputImagesToMontage
Deprecated.
 
setScale(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
setScaleFactor(double) - Method in class org.hkijena.jipipe.ui.components.ImageFrame
 
setScaleMode(ScaleMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
 
setScaleMode(ScaleMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator.ImageParameters
 
setScaleRange(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.register.RegisterRoiToImageByBrightnessAlgorithm
 
setScales(DoubleList) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures
 
setScaleX(double) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
setScaleX(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
setScaleX(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
setScaleX(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
setScaleX(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ScaleRoiAlgorithm
 
setScaleX(double) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
setScaleY(double) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.ImageBoxAnnotationGraphNode.ImageParameters
 
setScaleY(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesAlgorithm
 
setScaleY(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromAnnotationsAlgorithm
 
setScaleY(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm
 
setScaleY(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ScaleRoiAlgorithm
 
setScaleY(double) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIEditor
 
setScaling(double) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.features.SymmetryFilter3DAlgorithm
 
setScheduledSelection(Set<JIPipeGraphNode>) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
setScoreAccumulationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ScoreParameters
 
setScoreExpression(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.ScoreParameters
 
setScoringFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ConnectVerticesAlgorithm
 
setScoringFunction(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.FixOverlapsNonBranchingAlgorithm
 
setScratchBaseDirectory(Path) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
setScratchBaseDirectory(Path) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Sets the scratch base directory of the current run.
setScript(RScriptParameter) - Method in class org.hkijena.jipipe.extensions.r.algorithms.IteratingRScriptAlgorithm
 
setScript(RScriptParameter) - Method in class org.hkijena.jipipe.extensions.r.algorithms.MergingRScriptAlgorithm
 
setScrollable(boolean) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
 
setScrollPane(JScrollPane) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
setScrollPane(JScrollPane) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantTableModel
 
setScrollPane(JScrollPane) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableModel
 
setScrollPane(JScrollPane) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
setScrollPane(JScrollPane) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableModel
 
setScrollPane(JScrollPane) - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerTableModel
 
setSearchFindExistingNodes(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings.AlgorithmFinderSettings
 
setSearchFindExistingNodes(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings.SearchSettings
 
setSearchFindNewNodes(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings.AlgorithmFinderSettings
 
setSearchFindNewNodes(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings.SearchSettings
 
setSecond(ImageSliceIndex) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceCube
 
setSecondColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.lut.SetLUTFromColorsAlgorithm
 
setSeedsThreshold(int) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm
 
setSeedsThreshold(int) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.Watershed3DSegmentationAlgorithm
 
setSegmentationImageDataAnnotation(DataAnnotationQueryExpression) - Method in class org.hkijena.jipipe.extensions.ilastik.nodes.IlastikSegmentationImageObjectClassificationAlgorithm
 
setSegmentationMethod(SpotSegmentation3DAlgorithm.SpotSegmentationMethod) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm.SpotSegmentationSettings
 
setSegmentedChannel(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
setSegmentedChannel(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeChannelSettings
 
setSegmentResultsMethod(IterativeThreshold3DAlgorithm.SegmentResultsMethod) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
setSelectColorPrompt(String) - Method in class org.hkijena.jipipe.ui.components.ColorChooserButton
 
setSelected(boolean) - Method in class org.hkijena.jipipe.ui.components.ribbon.CheckBoxAction
 
setSelected(boolean) - Method in class org.hkijena.jipipe.ui.components.ribbon.LargeToggleButtonAction
 
setSelected(boolean) - Method in class org.hkijena.jipipe.ui.components.ribbon.SmallToggleButtonAction
 
setSelectedColor(Color) - Method in class org.hkijena.jipipe.ui.components.ColorChooserButton
 
setSelectedColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableColumnToImageAlgorithm
 
setSelectedDataTypes(Set<JIPipeDataInfo>) - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker
 
setSelectedFilaments(List<Filaments3DData>, boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
setSelectedIndices(IntegerRange) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.SliceROIListAlgorithm
 
setSelectedIndices(OptionalIntegerRange) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2
 
setSelectedInfo(JIPipeDataInfo) - Method in class org.hkijena.jipipe.ui.components.AddAlgorithmSlotPanel
 
setSelectedInfo(JIPipeParameterTypeInfo) - Method in class org.hkijena.jipipe.ui.components.AddParameterDialog
 
setSelectedInfo(JIPipeDataInfo) - Method in class org.hkijena.jipipe.ui.components.EditAlgorithmSlotPanel
 
setSelectedInfos(Set<JIPipeNodeInfo>) - Method in class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker
 
setSelectedItem(T) - Method in class org.hkijena.jipipe.ui.components.PickDynamicEnumValueDialog
 
setSelectedItem(Object) - Method in class org.hkijena.jipipe.ui.components.PickEnumValueDialog
 
setSelectedItem(T) - Method in class org.hkijena.jipipe.ui.components.pickers.PickerDialog
 
setSelectedItem(JIPipeNodeDatabaseEntry) - Method in class org.hkijena.jipipe.ui.grapheditor.general.search.NodeDatabaseSearchBox
 
setSelectedNode(JIPipeGraphNode) - Method in class org.hkijena.jipipe.ui.components.pickers.PickNodeDialog
 
setSelectedROI(Collection<ROI3D>, boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
setSelectedROI(Collection<Roi>, boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
setSelectedTab(String) - Method in class org.hkijena.jipipe.ui.project.JIPipeProjectTabMetadata
 
setSelection(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm
Deprecated.
 
setSelectionInterval(int, int) - Method in class org.hkijena.jipipe.ui.components.MultiSelectionModel
 
setSelectionInterval(int, int) - Method in class org.hkijena.jipipe.ui.components.SingleSelectionModel
 
setSelectTopN(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.LinesHoughDetection2DAlgorithm
 
setSeparateChannels(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm
 
setSeparateNuclei(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.NucleiSegmentation3DAlgorithm
 
setSeriesAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
setSeriesName(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTables2Algorithm
 
setSeriesName(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.plots.nodes.PlotTablesAlgorithm
Deprecated.
 
setSeriesToImport(IntegerList) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
setSessionId(String) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItem
 
setSessionId(String) - Method in class org.hkijena.jipipe.api.backups.JIPipeProjectBackupItemCollection
 
setSetter(Function<Object, Boolean>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
Sets the setter
setSetter(Consumer<T>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
Sets the setter
setSetter(Method) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
setShapeType(JIPipeDataInfoRef) - Method in class org.hkijena.jipipe.extensions.imagej2.algorithms.CreateIJ2ShapeAlgorithm
 
setSheetNameAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ResultsTableFromFile
 
setSheetNameExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm
Deprecated.
 
setSheetNameExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAsXLSXAlgorithm2
 
setSheets(StringList) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ResultsTableFromFile
 
setShortKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
Sets the short key
setShortKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
setShortKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
setShowAfterMinRuntime(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.settings.NotificationUISettings
 
setShowFilaments(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.settings.ImageViewerUIFilamentDisplaySettings
 
setShowHorizontal(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
setShowIntroduction(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
setShowLimitedParameters(boolean) - Method in class org.hkijena.jipipe.api.compartments.algorithms.JIPipeProjectCompartment
 
setShowLimitedParameters(boolean) - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
 
setShowName(boolean) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.GroupHeaderFormData
 
setShowName(boolean) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.ParameterFormData
 
setShowNotificationsAfterFirstStart(boolean) - Method in class org.hkijena.jipipe.extensions.settings.NotificationUISettings
 
setShowParameterSearchBar(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
setShowProjectInfo(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
setShowROI(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ImageViewerUIROI3DDisplaySettings
 
setShowROI(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.settings.ImageViewerUIROI2DDisplaySettings
 
setShowRunNotifications(boolean) - Method in class org.hkijena.jipipe.extensions.settings.NotificationUISettings
 
setShowRunOnlyIfInactive(boolean) - Method in class org.hkijena.jipipe.extensions.settings.NotificationUISettings
 
setShowSideBar(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer2DUISettings
 
setShowSideBar(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer3DUISettings
 
setShowSideBar(boolean) - Method in class org.hkijena.jipipe.extensions.settings.TableViewerUISettings
 
setShowSpots(boolean) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.settings.ImageViewerUISpotsDisplaySettings
 
setShowToolInfo(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setShowTracks(boolean) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.settings.ImageViewerUITracksDisplaySettings
 
setShowVertical(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
setShuffleLut(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToRGBAlgorithm
 
setSideBarVisible(boolean) - Method in class org.hkijena.jipipe.ui.components.FlexContentPanel
 
setSigma(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.AddNoise2DAlgorithm
 
setSigma(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
setSigma0X(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm
 
setSigma0Y(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm
 
setSigma1X(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm
 
setSigma1Y(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm
 
setSigmaX(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.GaussianBlur2DAlgorithm
 
setSigmaX(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm
 
setSigmaY(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.GaussianBlur2DAlgorithm
 
setSigmaY(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm
 
setSigmaZ(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm
 
setSilencedExtensions(Set<String>) - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry.Settings
 
setSilent(boolean) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
setSilent(boolean) - Method in class org.hkijena.jipipe.extensions.settings.ExtensionSettings
 
setSilent(boolean) - Method in class org.hkijena.jipipe.ui.quickrun.QuickRunSettings
 
setSilent(boolean) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
 
setSilentlyOverride(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ReorderHyperstackSlicesExpressionAlgorithm
 
SetSingleAnnotation - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Algorithm that annotates all data with the same annotation
SetSingleAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.SetSingleAnnotation
 
SetSingleAnnotation(SetSingleAnnotation) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.SetSingleAnnotation
Copies the algorithm
SetSingleAnnotation.VariablesInfo - Class in org.hkijena.jipipe.extensions.annotation.algorithms
 
setSize(Dimension) - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail
 
setSize(float, float) - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Sets the size of the view.
setSizeAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotateWithPathProperties
 
setSizeC(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateZeroImage
 
setSizeC(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateFromMathExpression2D
 
setSizeC(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
 
setSizeInfo(String) - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage
 
setSizeInfo(String) - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderPackage
 
setSizeT(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateZeroImage
 
setSizeT(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateFromMathExpression2D
 
setSizeT(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
 
setSizeZ(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateZeroImage
 
setSizeZ(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateFromMathExpression2D
 
setSizeZ(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
 
setSkipCache(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeOutputDataSlot
 
setSkipCenter(boolean) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData
 
setSkipCenter(boolean) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData
 
setSkipCenter(boolean) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.RectangleImageJ2ShapeData
 
setSkipDataGathering(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeInputDataSlot
 
setSkipEmpty(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator.GeneratedColumn
 
setSkipEmptyTarget(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.merge.MergeTableColumnsSupplementAlgorithm
 
setSkipExisting(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.CopyPath
 
setSkipExport(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeOutputDataSlot
 
setSkipGC(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeOutputDataSlot
 
setSkipIncompleteDataSets(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithmIterationStepGenerationSettings
 
setSkipIncompleteDataSets(boolean) - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithmIterationStepGenerationSettings
 
setSkipInvalid(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.CopyPath
 
setSkipped(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
Used internally to mark an algorithm as (not) executed without triggering isFunctionallyEquals() Affects JIPipeGraph's getDeactivatedNodes This is not serialized, but copied
setSliceAnnotation(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ImageToTableAlgorithm
 
setSliceAnnotation(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.HistogramGenerator
 
setSliceCLocation(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.Merge2DToHyperstackAlgorithm
 
setSliceFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontage2Algorithm
 
setSliceRange(IntegerRange) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.DataSlicer
 
setSliceRange(IntegerRange) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.IterationStepSlicer
 
setSlicesToImport(IntegerRange) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
 
setSliceTLocation(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.Merge2DToHyperstackAlgorithm
 
setSliceZero(ImagePlus, ImageProcessor, ImageSliceIndex) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Sets the slice of an image to the processor based on the index.
setSliceZLocation(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.Merge2DToHyperstackAlgorithm
 
setSlicingMode(FrangiVesselnessFeatures.SlicingMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.FrangiVesselnessFeatures
 
setSlotConfiguration(JIPipeSlotConfiguration) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
 
setSlotFilter(Predicate<JIPipeDataSlot>) - Method in class org.hkijena.jipipe.extensions.parameters.api.graph.SlotMapParameterCollection
 
setSlotLabel(String) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
setSlotLabelIsCustom(boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
setSlotName(String) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.GetJIPipeSlotFolderAlgorithm
 
setSlots(List<JIPipeInputDataSlot>) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStepGenerator
 
setSlotStatus(JIPipeGraphNodeUI.SlotStatus) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
setSlotStoragePath(Path) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
Sets storage path that is used during running the algorithm for saving the results
setSmooth(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.convert.Roi3DTo3DMeshAlgorithm
 
setSmooth(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm
 
setSmoothing(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.Hessian2DAlgorithm
 
setSmoothing(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
setSmoothness(int) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry
 
setSmoothness(int) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
setSortedStackIds(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm
 
setSortFilesNumerically(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.datasources.ImageStackFromFolder
 
setSortingLabelExpression(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
setSortOrder(SortOrder) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToBinsAlgorithm
 
setSortOrder(SortOrder) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm
 
setSortOrder(SortOrder) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByExpressionAlgorithm.SortEntry
 
setSortOrderList(MeasurementColumnSortOrder.List) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm
Deprecated.
 
setSortOrderList(MeasurementColumnSortOrder.List) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2
 
setSortOrderList(StringQueryExpressionAndSortOrderPairParameter.List) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.SortTableRowsAlgorithm
 
setSortOrderList(StringQueryExpressionAndSortOrderPairParameter.List) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByAnnotationsAlgorithm
 
setSource(String) - Method in class org.hkijena.jipipe.api.data.context.JIPipeMutableDataContext
 
setSource(String) - Method in class org.hkijena.jipipe.api.environments.JIPipeEnvironment
 
setSource(String) - Method in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
setSource(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
Sets the parameter source
setSource(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
For internal usage only
setSource(JIPipeParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
setSourceAnnotationFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.OverwriteAnnotations
 
setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeLabelsToThicknessAlgorithm
 
setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.MergeSmallLabelsAlgorithm
 
setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator
 
setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueHistogramGenerator
 
setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionAveragesGenerator
 
setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator
 
setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm
 
setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm
 
setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm
 
setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm
 
setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm
 
setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm
 
setSourceArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm
 
setSourceCenter(Point) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
setSourceColumn(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.RenameTableColumns2Algorithm.RenamingEntry
 
setSourceDocumentation(JIPipeParameterCollection, JIPipeDocumentation) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Sets source documentation
setSourceInfo(String) - Method in class org.hkijena.jipipe.api.nodes.JIPipeNodeExample
 
setSourcePoint(PointRange) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
setSourceUI(JIPipeGraphNodeUI) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
setSourceWrapMode(SourceWrapMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalImageCalculator2DExpression
 
setSpan(IntegerList) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData
 
setSpan(long) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData
 
setSpan(long) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData
 
setSpan(int) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.RectangleImageJ2ShapeData
 
setSpatialLocation(Point3d) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
setSpearmanRankCorrelation(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
setSplit(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.DefineRectangularRoiAlgorithm
Deprecated.
 
setSplit(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.ReferencedDefineRectangularRoiAlgorithm
Deprecated.
 
setSplitAfterwards(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiCalculatorAlgorithm
 
setSplitAtJunctions(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
setSplitBySlotName(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportData
 
setSplitBySlotName(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter
 
setSplitBySlotName(boolean) - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToFilesByMetadataExporterRun.Settings
 
setSplitC(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEExporterSettings
 
setSplitChannels(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
setSplitChannels(boolean) - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
setSplitCharacter(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtraction
 
setSplitFocalPlanes(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
setSplitFocalPlanes(boolean) - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
setSplitIntoConnectedComponents(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
setSplitPickedIndex(int) - Method in class org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtraction
 
setSplitSlices(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
setSplitT(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEExporterSettings
 
setSplitTimePoints(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
setSplitTimePoints(boolean) - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
setSplitZ(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEExporterSettings
 
setSpotCollection(SpotsCollectionData, boolean) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D
 
setSpotDrawer(SpotDrawer) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SpotsToRGBNode
 
setSpotDrawer(SpotDrawer) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.settings.ImageViewerUISpotsDisplaySettings
 
setStackOrder(DimensionOrder) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
setStackOrder(DimensionOrder) - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
setStackSizeAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
setStandardButtonBorder(AbstractButton) - Static method in class org.hkijena.jipipe.utils.UIUtils
Makes a button flat
setStandardButtonBorder(AbstractButton, Color, int, int, int, int) - Static method in class org.hkijena.jipipe.utils.UIUtils
Makes a button flat
setStart(Scene3DLineGeometry.LineEndPoint) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry
 
setStartAt(Reslicer.Direction) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Reslicer
 
setStartsAtMean(boolean) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
setStartSlice(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm
 
setState(boolean) - Method in class org.hkijena.jipipe.ui.components.ribbon.CheckBoxAction
 
setState(boolean) - Method in class org.hkijena.jipipe.ui.components.ribbon.LargeToggleButtonAction
 
setState(boolean) - Method in class org.hkijena.jipipe.ui.components.ribbon.SmallToggleButtonAction
 
setStatistics(ROI3DMeasurementSetParameter) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.Measurement3DSettings
 
setStatistics(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MeasurementDrawerPlugin2D.Settings
 
setStatistics(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.Measurement2DSettings
 
setStatisticsParameters(ImageStatisticsSetParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.FindParticles2D
 
setStatus(String) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.JIPipeLogger
 
setStatusMessage(String) - Method in class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
setStatusUpdatedEventEmitter(JIPipeProgressInfo.StatusUpdatedEventEmitter) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
setStatusValid(boolean) - Method in class org.hkijena.jipipe.extensions.batchassistant.DataBatchStatusData
 
setStepSize(double) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.NumberRangeParameterGenerator
 
setStitchThreshold(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeSegmentationThresholdSettings
 
setStitchThreshold(double) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationThresholdSettings_Old
Deprecated.
 
setStitchThreshold(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeSegmentationThresholdSettings
 
setStitchTiles(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
setStitchTiles(boolean) - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
setStopSlice(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm
 
setStoragePath(Path) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Sets the storage path.
setStoreIntermediateResults(boolean) - Method in class org.hkijena.jipipe.ui.quickrun.QuickRunSettings
 
setStoreToCache(boolean) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
setStoreToCache(boolean) - Method in class org.hkijena.jipipe.ui.quickrun.QuickRunSettings
 
setStoreToDisk(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
setStoreToDisk(boolean) - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunConfiguration
 
setStrict(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm
 
setStringValue(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.StringOrDouble
 
setStrokeColor(Color) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer
 
setStrokeColor(Color) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
setStrokeColorEdgeFeature(EdgeFeature) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
setStrokeColorFeature(SpotFeature) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer
 
setStrokeColorMode(TrackDrawer.StrokeColorMode) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
setStrokeColorTrackFeature(TrackFeature) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
setStrokeWidth(int) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer
 
setStrokeWidth(int) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
setStyle(JIPipeNotificationAction.Style) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction
 
setSubFolder(String) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ListFiles
 
setSubFolder(String) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ListSubfolders
 
setSubPath(Path) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ConcatenateByParameter
Sets the subfolder
setSubtract(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm
 
setSuffix(String) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.TemporaryFileDataSource
 
setSumColumnName(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueAveragesGenerator
 
setSummary(HTMLText) - Method in class org.hkijena.jipipe.api.JIPipeMetadata
 
setSupportsLinux(boolean) - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
setSupportsMacOS(boolean) - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
setSupportsWindows(boolean) - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
setSwapDimensions(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
setSwapDimensions(boolean) - Method in class org.hkijena.jipipe.extensions.omero.parameters.ImageImportParameters
 
setSwitchPanningDirection(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setT(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
 
setT(TIntList) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndices
 
setTab(String) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.FormData.TabSettings
 
setTabAnnotation(String) - Method in class org.hkijena.jipipe.extensions.forms.algorithms.IteratingFormProcessorAlgorithm
 
setTabAnnotation(String) - Method in class org.hkijena.jipipe.extensions.forms.algorithms.MergingFormProcessorAlgorithm
 
setTabAnnotation(String) - Method in class org.hkijena.jipipe.extensions.forms.algorithms.SimpleIteratingFormProcessorAlgorithm
 
setTabAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.FormData.TabSettings
 
setTable(ResultsTable) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
setTableColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column
 
setTableModel(ResultsTableData) - Method in class org.hkijena.jipipe.ui.tableeditor.TableEditor
 
setTableRow(JIPipeDataTableMetadataRow) - Method in class org.hkijena.jipipe.api.data.JIPipeExportedDataAnnotation
 
setTables(ResultsTableDataList) - Method in class org.hkijena.jipipe.extensions.tables.nodes.DefineTablesAlgorithm
 
setTabPanelBorder(Border) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
 
setTagListAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.omero.parameters.AnnotationsToOMEROTagExporter
 
setTagsToListAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.omero.parameters.OMEROTagToAnnotationImporter
 
setTagsToListFilter(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.omero.parameters.OMEROTagToAnnotationImporter
 
setTarget(Path) - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata
 
setTargetArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnnotateByImageStatisticsExpressionAlgorithm
 
setTargetArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.ImageStatisticsExpressionAlgorithm
 
setTargetArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.ClassicWatershedSegmentationAlgorithm
 
setTargetArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.SeededWatershedSegmentationAlgorithm
 
setTargetArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.MergeImagesAlgorithm
 
setTargetArea(ImageROITargetArea) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.SimpleImageAndRoiIteratingAlgorithm
 
setTargetC(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm
 
setTargetC(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ReorderRoiDimensionsAlgorithm
 
setTargetCenter(Point) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
setTargetColumnName(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.ImageToTableColumnAlgorithm
 
setTargetDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm
 
setTargetDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackCombinerAlgorithm
 
setTargetDimensionAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm
 
setTargetPoint(PointRange) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
setTargetT(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm
 
setTargetT(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ReorderRoiDimensionsAlgorithm
 
setTargetUI(JIPipeGraphNodeUI) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.DisplayedSlotEdge
 
setTargetZ(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ReorderDimensionsAlgorithm
 
setTargetZ(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ReorderRoiDimensionsAlgorithm
 
setTasks(List<Ribbon.Task>) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon
 
setTasksFinishedLabel(String) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
 
setTaskSingleEnqueuedRunningLabel(String) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
 
setTaskSingleRunningLabel(String) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
 
settAxis(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm
 
setTempDirectory(OptionalPathParameter) - Method in class org.hkijena.jipipe.extensions.settings.RuntimeSettings
 
setTemplate(JIPipeDynamicParameterCollection) - Method in class org.hkijena.jipipe.extensions.parameters.library.collections.ParameterCollectionList
Sets the template for new items
setTemplateDescription(String) - Method in class org.hkijena.jipipe.api.JIPipeProjectMetadata
 
setTemplateMatchingMethod(TemplateMatchingMethod) - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
setTemporaryDocument(MarkdownDocument) - Method in class org.hkijena.jipipe.ui.components.markdown.MarkdownReader
Sets the document to some temporary one without changing the reference to the main document
setText(String) - Method in class org.hkijena.jipipe.api.data.thumbnails.JIPipeIconLabelThumbnailData
 
setText(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawTextRoiAlgorithm
 
setText(String) - Method in class org.hkijena.jipipe.ui.components.FancyPasswordField
 
setText(String) - Method in class org.hkijena.jipipe.ui.components.FancyTextField
 
setText(String) - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
setText(String) - Method in class org.hkijena.jipipe.ui.components.ReadonlyCopyableTextField
 
setText(String) - Method in class org.hkijena.jipipe.ui.components.search.SearchTextField
 
setText(String) - Method in class org.hkijena.jipipe.ui.texteditor.JIPipeTextEditor
 
setTextAnnotation(int, String, String) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Sets a text annotation
setTextAnnotation(int, JIPipeTextAnnotation) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Sets a text annotation
setTextAnnotationFilter(AnnotationQueryExpression) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PullDataTableAnnotations
 
setTextAnnotationFilter(AnnotationQueryExpression) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PushDataTableAnnotations
 
setTextAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableArchive
 
setTextAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImportDataTableDirectory
 
setTextAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PullDataTableAnnotations
 
setTextAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.datatable.PushDataTableAnnotations
 
setTextAnnotationMergeMode(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.ImportJIPipeSlotFolderAlgorithm
 
setTextAnnotations(List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadataRow
Sets annotations
setTextColor(Color) - Method in class org.hkijena.jipipe.extensions.core.nodes.JIPipeCommentNode
 
setTextColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings
 
setTextColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
setTextColor(Color) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings
 
setTextContent(String) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode
 
setTextPaneFont(JTextPane, String, int) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
setTextProcessor(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.strings.nodes.text.ProcessTextDataAlgorithm
 
setTextTitle(String) - Method in class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode
 
setTheme(JIPipeUITheme) - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
setThinLines(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm
 
setThreadPool(JIPipeFixedThreadPool) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNodeRunContext
Sets the thread tool for parallelization
setThreads(OptionalIntegerParameter) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.RunJIPipeProjectAlgorithm
 
setThreshold(int) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.binary.DistanceMap3DAlgorithm
 
setThreshold(int) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.binary.ErodedVolumeFraction3DAlgorithm
 
setThreshold(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm
 
setThreshold(float) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm
 
setThreshold(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.MaskToRoiAlgorithm
 
setThreshold(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
setThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm
 
setThreshold(IntNumberRangeParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm
 
setThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm
 
setThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm
 
setThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters
 
setThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm
 
setThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters
 
setThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm
 
setThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters
 
setThresholdAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm
 
setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualHSBThreshold2DAlgorithm
 
setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualLABThreshold2DAlgorithm
 
setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.color.ManualRGBThreshold2DAlgorithm
 
setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm
 
setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm
 
setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm
 
setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm
 
setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm
 
setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm
 
setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm
 
setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm
 
setThresholdAnnotationStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm
 
setThresholdCalculationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm
 
setThresholdCalculationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters
 
setThresholdCalculationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm
 
setThresholdCalculationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters
 
setThresholdCalculationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm
 
setThresholdCalculationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters
 
setThresholdCombinationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm
 
setThresholdCombinationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm
 
setThresholdCombinationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters
 
setThresholdCombinationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm
 
setThresholdCombinationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters
 
setThresholdCombinationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm
 
setThresholdCombinationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters
 
setThresholdCombinationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
setThresholdCriteriaExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm.FilteringParameters
 
setThresholdMethod(IterativeThreshold3DAlgorithm.ThresholdMethod) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
setThresholdMode(AutoThreshold2DAlgorithm.SliceThresholdMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm
 
setThresholdMode(AutoThreshold2DAlgorithm.SliceThresholdMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm
 
setThresholdMode(AutoThreshold2DAlgorithm.SliceThresholdMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm
 
setThresholdMode(AutoThreshold2DAlgorithm.SliceThresholdMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm
 
setThresholdMode(AutoThreshold2DAlgorithm.SliceThresholdMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm
 
setThresholdMode(AutoThreshold2DAlgorithm.SliceThresholdMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm
 
setThresholdMode(AutoThreshold2DAlgorithm.SliceThresholdMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm
 
setThresholdRegression(AutoThresholdRegression.Implementation) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
setThresholds(IntegerRange) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.iterative.IterativeThresholdByROIStatistics2DAlgorithm
 
setThumbnail(JIPipeThumbnailData) - Method in class org.hkijena.jipipe.api.data.JIPipeDataItemStore
Sets the thumbnail
setThumbnail(ImageParameter) - Method in class org.hkijena.jipipe.api.JIPipeMetadata
 
setThumbnails(List<JIPipeDataThumbnailsMetadata.Thumbnail>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata
 
setTile(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationPerformanceSettings_Old
Deprecated.
 
setTileHeight(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
setTileInsetXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
setTileInsetXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
setTileInsetXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm
 
setTileInsetYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
setTileInsetYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
setTileInsetYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm
 
setTileOverlap(double) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.deprecated.CellposeSegmentationPerformanceSettings_Old
Deprecated.
 
setTileRealXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
setTileRealXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
setTileRealXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm
 
setTileRealYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
setTileRealYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
setTileRealYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm
 
setTileSizeX(int) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling2DSettings
 
setTileSizeX(int) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling3DSettings
 
setTileSizeX(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
setTileSizeX(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
setTileSizeY(int) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling2DSettings
 
setTileSizeY(int) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling3DSettings
 
setTileSizeY(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
setTileSizeY(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
setTileSizeZ(int) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling3DSettings
 
setTileWidth(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.MontageCreator
 
setTileXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
setTileXAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
setTileYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
setTileYAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
setTimeout(int) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SleepAlgorithm
 
Settings() - Constructor for class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry.Settings
 
Settings() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
Settings(Coloc2Node.Settings) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node.Settings
 
SETTINGS - Static variable in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MeasurementDrawerPlugin2D
 
Settings() - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MeasurementDrawerPlugin2D.Settings
 
Settings() - Constructor for class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToFilesByMetadataExporterRun.Settings
 
Settings() - Constructor for class org.hkijena.jipipe.ui.components.AddParameterDialog.Settings
 
SettingsIO - Interface in org.hkijena.jipipe.extensions.ijtrackmate.io
 
settingToParameter(Object) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.io.DefaultSettingsIO
 
settingToParameter(Object) - Method in interface org.hkijena.jipipe.extensions.ijtrackmate.io.SettingsIO
 
settingToParameter(Object) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.io.SpotFeaturePenaltyParameterListSettingsIO
 
setTitle(String) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
setTitle(String) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerCacheDataViewerWindow
 
setTitle(String) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerWindow
 
setTitle(String) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
Sets the plot title
setTitle(String) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.DocumentTab
 
setTitle(String) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.SingletonTab
 
setTitle(String) - Method in class org.hkijena.jipipe.ui.ijupdater.IJProgressAdapter
 
setTitle(String) - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeProgressAdapter
 
setTitle(String) - Method in class org.hkijena.jipipe.ui.ijupdater.ProgressAdapter
 
setTitle(String) - Method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
 
setTitleAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
setTitleAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ImagePlusFromFile
 
setTitleAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
setTitleAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROImageAlgorithm
 
setTitleFilterExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ResultsTableFromGUI
 
setTitleFontSize(int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
setTo(JIPipeSlotConfiguration) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
setTo(JIPipeSlotConfiguration) - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration
Makes this slot configuration equivalent to the provided one
setTo(JIPipeRuntimePartition) - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartition
 
setToAskOnClose(JDialog, String, String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Installs an event to the window that asks the user before the window is closes
setToAskOnClose(JFrame, String, String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Installs an event to the window that asks the user before the window is closes
setToAskOnClose(JFrame, Supplier<String>, String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Installs an event to the window that asks the user before the window is closes
SetToColorAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color
 
SetToColorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SetToColorAlgorithm
 
SetToColorAlgorithm(SetToColorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SetToColorAlgorithm
 
setToExample(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm
 
setToExample(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.BioFormatsImporter
 
setTolerance(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm
 
setTool(ImageViewerPanelCanvas2DTool) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
setToolInfoDistance(int) - Method in class org.hkijena.jipipe.extensions.settings.GraphEditorUISettings
 
setTooltip(String) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotificationAction
 
setTop(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
 
setTop(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.InnerMargin
 
setTop(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
setTotalOverlapAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm
 
setToUniformColor(Color) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerOpacityLUTEditor
 
setToUniformColorByDialog() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerOpacityLUTEditor
 
SetToValueAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color
 
SetToValueAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SetToValueAlgorithm
 
SetToValueAlgorithm(SetToValueAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SetToValueAlgorithm
 
setTrack(int) - Method in class org.hkijena.jipipe.ui.grapheditor.general.layout.MSTGraphAutoLayoutMethod.Node
 
setTrackBackgroundGenerator(PaintGenerator) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI.TrackRenderer
 
setTrackCollection(TrackCollectionData) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D
 
setTrackDisplayMode(DisplaySettings.TrackDisplayMode) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
setTrackDrawer(TrackDrawer) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TracksToRGBNode
 
setTrackDrawer(TrackDrawer) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.settings.ImageViewerUITracksDisplaySettings
 
setTrackIDAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.FollowSpotsPerTrackNode
 
setTrainingFeatures(WekaFeatureSet2D) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature2DSettings
 
setTrainingFeatures(WekaFeatureSet3D) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature3DSettings
 
setTrainSizeModel(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.CellposeTrainingAlgorithm
 
setTrainSizeModel(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
setTrainSizeModel(boolean) - Method in class org.hkijena.jipipe.extensions.omnipose.algorithms.OmniposeTrainingAlgorithm
 
setTraits(List<JIPipeTextAnnotation>) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadataRow
Compatibility function to allow reading tables in an older format
setTransformation(ApplyMath2DAlgorithm.Transformation) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyMath2DAlgorithm
 
setTransformation(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyMathExpression2DAlgorithm
 
setTransformation(ApplyTransform2DAlgorithm.Transformation) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyTransform2DAlgorithm
 
setTransformation(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm
 
setTree(JIPipeParameterTree) - Method in class org.hkijena.jipipe.ui.components.ParameterTreeUI
 
setTreeExpandedState(JTree, boolean) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
setTrueDataType(String) - Method in class org.hkijena.jipipe.api.data.JIPipeExportedDataAnnotation
 
setTrueDataType(String) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadataRow
 
setTrueString(OptionalStringParameter) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.BooleanFormData
 
setTrySolveJunctions(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
setType(DirectionalFilter.Type) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DirectionalFilter2DAlgorithm
 
setType(JIPipeParameterTypeInfoRef) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column
 
setType(JIPipeParameterTypeInfoRef) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column
 
setType(String) - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage
 
setType(PythonEnvironmentType) - Method in class org.hkijena.jipipe.extensions.python.PythonEnvironment
 
setType(JIPipeParameterTypeInfoRef) - Method in class org.hkijena.jipipe.ui.parameters.DynamicParameterEditorDialog.ParameterEntry
 
setType(String) - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderPackage
 
setTypeAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotateWithPathProperties
 
setUiAllowedParameterTypes(Set<Class<?>>) - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeParameterTypeInfoRef
 
setUiLocked(boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
 
setUIOrder(int) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
Sets the UI order
setUIOrder(int) - Method in class org.hkijena.jipipe.api.parameters.JIPipeMutableParameterAccess
 
setUiOrder(int) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
setUIOrder(int) - Method in class org.hkijena.jipipe.api.parameters.JIPipeReflectionParameterAccess
 
setUiRestrictToCompartments(Set<UUID>) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroupCollection
 
setUiShape(JIPipeGraphEdge.Shape) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphEdge
 
setUiVisibility(JIPipeGraphEdge.Visibility) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphEdge
 
setUniformStrokeColor(boolean) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer
 
setUniqueStackIds(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm
 
setUnit(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 
setup() - Method in class org.hkijena.jipipe.ui.cache.exporters.JIPipeDataTableToFilesByMetadataExporterRun
Opens the necessary dialogs
setup() - Method in class org.hkijena.jipipe.ui.resultanalysis.JIPipeResultCopyFilesByMetadataExporterRun
Opens the necessary dialogs
setUpdateSiteDependencies(JIPipeImageJUpdateSiteDependency.List) - Method in class org.hkijena.jipipe.api.JIPipeProjectMetadata
 
setUpdateSiteDependenciesParameter(JIPipeImageJUpdateSiteDependency.List) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
 
setUpdateSitesToAddAndActivate(List<UpdateSite>) - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeImageJPluginManager
 
setUpdateWithHexCode(boolean) - Method in class org.hkijena.jipipe.ui.components.ColorChooserButton
 
setupLogger(CommandLine, DefaultExecutor, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
 
setupLogger(CommandLine, DefaultExecutor, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.ProcessUtils
 
setUpperThreshold(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.segment.RidgeDetector2DAlgorithm
 
setUrl(String) - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
setUrl(String) - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage
 
setUrl(String) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROAnnotationReferenceData
 
setUrl(String) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMERODatasetReferenceData
 
setUrl(String) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROImageReferenceData
 
setUrl(String) - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROProjectReferenceData
 
setUrl(String) - Method in class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency
 
setUrl(String) - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderPackage
 
setUrlMultiPart(List<String>) - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
setUrls(StringList) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.DownloadFilesDataSource
 
setUseBioFormats(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.ImageJDataTypesSettings
 
setUseCustomColorMap(boolean) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
setUseExpression(boolean) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRange
 
setUseNaturalSortOrder(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.columns.SortTableColumnsAlgorithm
 
setUseNaturalSortOrder(boolean) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.SortTableRowsAlgorithm
 
setUseNeighbors(boolean) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature2DSettings
 
setUseNeighbors(boolean) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature3DSettings
 
setUseOutlinePaintForWhiskers(boolean) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Sets the flag that, if true, causes the whiskers to be drawn using the series outline paint, and sends a RendererChangeEvent to all registered listeners.
setUseOverlay(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
setUserDirectory(String, Path) - Method in class org.hkijena.jipipe.api.JIPipeProjectDirectories
 
setUseResidualConnections(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
setUseResidualConnections(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeTrainingTweaksSettings
 
setUseResidualConnections(boolean) - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeTrainingTweaksSettings
 
setUserModifiable(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo.Deserializer.Builder
 
setUserModifiable(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
Set this variable to make a slot not removable/editable.
setUserName(String) - Method in class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment
 
setUseScratchDirectory(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.datasources.TemporaryFolderDataSource
 
setUseStackHistogram(boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm
 
setUseStyleVector(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
setUseStyleVector(boolean) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeTrainingTweaksSettings
 
setUseStyleVector(boolean) - Method in class org.hkijena.jipipe.extensions.omnipose.parameters.OmniposeTrainingTweaksSettings
 
setUseThickness(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.filter.RemoveBorderFilaments
 
setUseWekaNativeTiling(boolean) - Method in class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling2DSettings
 
setUuid(UUID) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentEdge
 
setUuid(UUID) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
setUUIDOf(JIPipeGraphNode, UUID) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Changes the UUID of the node
setValidateImageJDependencies(boolean) - Method in class org.hkijena.jipipe.extensions.settings.ExtensionSettings
 
setValidateJson(boolean) - Method in class org.hkijena.jipipe.extensions.strings.datasources.ImportJsonAlgorithm
 
setValidateNodeTypes(boolean) - Method in class org.hkijena.jipipe.extensions.settings.ExtensionSettings
 
setValidateOnSave(boolean) - Method in class org.hkijena.jipipe.extensions.settings.GeneralUISettings
 
setValidateXml(boolean) - Method in class org.hkijena.jipipe.extensions.strings.datasources.ImportXMLAlgorithm
 
setValidationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.DoubleFormData
 
setValidationExpression(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.IntegerFormData
 
setValidationExpression(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
setValidationExpression(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.StringFormData
 
setValue(String) - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
 
setValue(String, T) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Sets a parameter value
setValue(boolean) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.BooleanFormData
 
setValue(double) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.DoubleFormData
 
setValue(String) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.EnumFormData
 
setValue(int) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.IntegerFormData
 
setValue(Path) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
setValue(String) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.StringFormData
 
setValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.ChangeFilamentVertexPropertiesAlgorithm
 
setValue(double) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertex
 
setValue(double) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeatureFilterParameter
 
setValue(double) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeatureFilterParameter
 
setValue(byte) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.ByteConstantValueImageJ2OutOfBoundsFactoryData
 
setValue(double) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.DoubleConstantValueImageJ2OutOfBoundsFactoryData
 
setValue(float) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.FloatConstantValueImageJ2OutOfBoundsFactoryData
 
setValue(int) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.IntegerConstantValueImageJ2OutOfBoundsFactoryData
 
setValue(long) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.LongConstantValueImageJ2OutOfBoundsFactoryData
 
setValue(short) - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.ShortConstantValueImageJ2OutOfBoundsFactoryData
 
setValue(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SetToValueAlgorithm
 
setValue(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyMath2DAlgorithm
 
setValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.properties.SetRoiMetadataByStatisticsAlgorithm.MetadataProperty
 
setValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.KeyValueThresholdPartitionGenerator.GeneratedColumn
 
setValue(int) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.OrthoSliderPanel
 
setValue(T) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicEnumParameter
 
setValue(V) - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameter
 
setValue(String) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRange
 
setValue(double) - Method in class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 
setValue(String) - Method in class org.hkijena.jipipe.extensions.strings.datasources.StringDefinitionDataSource
 
setValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2.Entry
 
setValue(Object) - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnConversionParameter
 
setValue(Object) - Method in class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnIntegrationParameter
 
setValue(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByExpressionAlgorithm.SortEntry
 
setValue(String) - Method in class org.hkijena.jipipe.utils.scripting.MacroSetting
 
setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableMetadata
 
setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
 
setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.extensions.parameters.library.table.ParameterTable
 
setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
setValueAt(Object, int, String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantTableModel
 
setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableModel
 
setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableModel
 
setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerTableModel
 
setValueAt(Object, int, int) - Method in class org.hkijena.jipipe.ui.ijupdater.FileTableModel
 
setValueAxisFontSize(int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CategoryPlotData
 
setValueAxisFontSize(int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
setValueAxisLabel(String) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CategoryPlotData
 
setValueAxisLabel(String) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
setValueAxisMaximum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CategoryPlotData
 
setValueAxisMaximum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
setValueAxisMinimum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CategoryPlotData
 
setValueAxisMinimum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData
 
setValueColumn(TableColumnSourceExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.ApplyExpressionPerLabelAlgorithm
 
setValueColumn(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.UnMeltTableAlgorithm
 
setValueColumns(StringQueryExpression) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.MeltTableAlgorithm
 
setValueFilter(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
setValueMethod(int) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm
 
setValues(IntegerRange) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByIdAlgorithm
 
setValues(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column
 
setValues(Set<T>) - Method in class org.hkijena.jipipe.extensions.parameters.api.enums.DynamicSetParameter
 
setValuesAreJson(boolean) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.DefineParametersFromTableAlgorithm.Column
 
setValuesAreJson(boolean) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.GenerateParametersFromExpressionAlgorithm.Column
 
SetVariableFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.variables
 
SetVariableFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.variables.SetVariableFunction
 
SetVariableIfFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.variables
 
SetVariableIfFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.variables.SetVariableIfFunction
 
SetVariablesFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.variables
 
SetVariablesFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.variables.SetVariablesFunction
 
setvBarHeight(double) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
setVectorDimension(HyperstackDimension) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.Warp2DAlgorithm
 
setVersion(String) - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
setVersion(String) - Method in class org.hkijena.jipipe.api.environments.JIPipeEnvironment
 
setVersion(String) - Method in class org.hkijena.jipipe.JIPipeJsonPlugin
Sets the version
SetVertexIntensityFromImageAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.modify
 
SetVertexIntensityFromImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.SetVertexIntensityFromImageAlgorithm
 
SetVertexIntensityFromImageAlgorithm(SetVertexIntensityFromImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.SetVertexIntensityFromImageAlgorithm
 
SetVertexMetadataFromImageAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.modify
 
SetVertexMetadataFromImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.SetVertexMetadataFromImageAlgorithm
 
SetVertexMetadataFromImageAlgorithm(SetVertexMetadataFromImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.SetVertexMetadataFromImageAlgorithm
 
SetVertexPhysicalSizeFromImageAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.modify
 
SetVertexPhysicalSizeFromImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.SetVertexPhysicalSizeFromImageAlgorithm
 
SetVertexPhysicalSizeFromImageAlgorithm(SetVertexPhysicalSizeFromImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.SetVertexPhysicalSizeFromImageAlgorithm
 
SetVertexRadiusFromImageAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.modify
 
SetVertexRadiusFromImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.SetVertexRadiusFromImageAlgorithm
 
SetVertexRadiusFromImageAlgorithm(SetVertexRadiusFromImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.modify.SetVertexRadiusFromImageAlgorithm
 
setVerticalBarSize(OptionalQuantity) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm
 
setVerticalBarSize(OptionalQuantity) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm
 
setVerticalLabel(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings
 
setVerticalLabel(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings
 
setVertices(float[]) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DIndexedMeshGeometry
 
setVertices(float[]) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DUnindexedMeshGeometry
 
setVerticesIndex(int[]) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DIndexedMeshGeometry
 
setVirtual(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
 
setVirtualData(int, JIPipeDataItemStore) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Deprecated.
use setDataItemStore
setVirtualDataAnnotation(int, String, JIPipeDataItemStore) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Deprecated.
use setDataAnnotationItemStore
setVirtualEnvDirectory(Path) - Method in class org.hkijena.jipipe.extensions.python.installers.SelectVirtualEnvPythonInstaller.Configuration
 
setVisibility(String, boolean) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionVisibilities
Sets the visibility of parameter with specified key
setVisible(boolean) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Action
 
setVisible(boolean) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Band
 
setVisible(boolean) - Method in class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Task
 
setVisible(boolean) - Method in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
setVisible(boolean) - Method in class org.hkijena.jipipe.utils.scripting.MacroFlag
 
setVisibleParameters(Set<String>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterCollectionVisibilities
Sets visible parameters
setvLabel(String) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
setVolumeSimilarityAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.AnnotateWithOverlapMeasureLabelsAlgorithm
 
setVoxelsThreshold(int) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.Watershed3DSegmentationAlgorithm
 
setWebclientUrl(String) - Method in class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment
 
setWebsite(String) - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
setWebsite(String) - Method in class org.hkijena.jipipe.api.JIPipeMetadata
Sets the website
setWebsite(String) - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage
 
setWebsite(String) - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderPackage
 
setWeight(float) - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.LocalMeanSpotSegmentation3DAlgorithm
 
setWeightDecay(double) - Method in class org.hkijena.jipipe.extensions.cellpose.algorithms.deprecated.CellposeTrainingAlgorithm_Old
Deprecated.
 
setWeightDecay(double) - Method in class org.hkijena.jipipe.extensions.cellpose.parameters.CellposeTrainingTweaksSettings
 
setWhiskerWidth(double) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CustomBoxAndWhiskerRenderer
Sets the width of the whiskers as a fraction of the bar width and sends a RendererChangeEvent to all registered listeners.
setWidth(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap
 
setWidth(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateZeroImage
 
setWidth(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateFromMathExpression2D
 
setWidth(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
 
setWidth(int) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.SnapshotSettings
 
setWidth(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
setWidthAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePropertiesToAnnotationAlgorithm
 
setWithEdges(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
setWithEdges(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm
 
setWithEdges(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm
 
setWithEdges(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm
 
setWithEdges(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm
 
setWithGrid(boolean) - Method in class org.hkijena.jipipe.ui.components.ImageFrame
 
setWithLegend(boolean) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
setWithNonMaximaSuppression(boolean) - Method in class org.hkijena.jipipe.extensions.ijmultitemplatematching.MultiTemplateMatchingAlgorithm
 
setWithParents(boolean) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.CreateDirectory
Sets the subfolder
setWithRefresh(boolean) - Method in class org.hkijena.jipipe.ui.parameterreference.GraphNodeParameterReferenceGroupCollectionEditorUI
 
setWithSpinner(boolean) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
setWithVertices(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsTo3DMeshAlgorithm
 
setWithVertices(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToLabelsAlgorithm
 
setWithVertices(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToMaskAlgorithm
 
setWithVertices(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoi3DAlgorithm
 
setWithVertices(boolean) - Method in class org.hkijena.jipipe.extensions.ijfilaments.nodes.convert.ConvertFilamentsToRoiAlgorithm
 
setWorkDirectory(Path) - Method in class org.hkijena.jipipe.api.JIPipeProject
Sets the folder where the project is currently working in.
setWorkDirectory(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
setWrapMode(WrapMode) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.Warp2DAlgorithm
 
setWrappedGraph(JIPipeGraph) - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
 
setWrappedGraph(JIPipeGraph) - Method in class org.hkijena.jipipe.api.grouping.parameters.NodeGroupContents
 
setWriteToAnnotation(OptionalTextAnnotationNameParameter) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.RunExpressionAlgorithm
 
setWriteToAnnotationMergeStrategy(JIPipeTextAnnotationMergeMode) - Method in class org.hkijena.jipipe.extensions.utils.algorithms.RunExpressionAlgorithm
 
setX(double) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.Point3d
 
setX(IntegerRange) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.MultiOrthoSlicerSettings
 
setX(float) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint
 
setxAxis(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.CanvasEqualizer
 
setxAxis(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm
 
setxAxis(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm
 
setxAxis(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
 
setxAxis(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm
 
setxAxisFontSize(int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
 
setxAxisLabel(String) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
 
setxAxisMaximum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
 
setxAxisMinimum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
 
setxPath(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.AnnotateWithXPathDataAlgorithm.Entry
 
setxPath(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractTextFromXMLAlgorithm
 
setxPath(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.strings.nodes.xml.ExtractXPathDataAsTableAlgorithm.Entry
 
setXyAnchor(Anchor) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.AssembleExtractedROIAlgorithm
 
setXyAnchor(Anchor) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.assemble.ExtractFromROIAlgorithm
 
setXyStep(int) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.register.RegisterRoiToImageByBrightnessAlgorithm
 
setY(double) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.Point3d
 
setY(IntegerRange) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.MultiOrthoSlicerSettings
 
setY(float) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint
 
setyAxis(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.CanvasEqualizer
 
setyAxis(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm
 
setyAxis(NumericFunctionExpression) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm
 
setyAxis(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
 
setyAxis(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm
 
setyAxisFontSize(int) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
 
setyAxisLabel(String) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
 
setyAxisMaximum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
 
setyAxisMinimum(OptionalDoubleParameter) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
 
setZ(double) - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.Point3d
 
setZ(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
 
setZ(TIntList) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndices
 
setZ(IntegerRange) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.MultiOrthoSlicerSettings
 
setZ(float) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry.LineEndPoint
 
setzAxis(OptionalJIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm
 
setzAxis(JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm
 
setZoom(double) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D
 
setZoom(double) - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
setZoom(double) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
setZoomBaseSpeed(double) - Method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer2DUISettings
 
setZoomDynamicSpeed(double) - Method in class org.hkijena.jipipe.extensions.imageviewer.settings.ImageViewer2DUISettings
 
setZoomedHitArea(Rectangle) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUIActiveArea
 
setzOrder(int) - Method in class org.hkijena.jipipe.api.nodes.annotation.JIPipeAnnotationGraphNode
 
shallowClone() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Creates a shallow copy of this list
shallowCopy() - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
shallowCopy() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
Returns a shallow copy (the vertices and edges are not copied)
shallowCopy() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
SHAPE - Static variable in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.ThumbRenderer
 
SHAPE - Static variable in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl.ThumbRenderer
 
SHAPE - Static variable in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI.ThumbRenderer
 
ShapeImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.data.input
Handling of Shape
ShapeImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.data.input.ShapeImageJ2ModuleInput
 
ShapeParameters() - Constructor for class org.hkijena.jipipe.extensions.graphannotation.nodes.TextBoxAnnotationGraphNode.ShapeParameters
 
ShapeParameters(TextBoxAnnotationGraphNode.ShapeParameters) - Constructor for class org.hkijena.jipipe.extensions.graphannotation.nodes.TextBoxAnnotationGraphNode.ShapeParameters
 
Sheet(String, String, Icon, String, Icon, JIPipeParameterCollection) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeSettingsRegistry.Sheet
Creates a new instance
ShortArrayParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays
 
ShortArrayParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.ShortArrayParameterImageJ2ModuleInput
 
ShortConstantValueImageJ2OutOfBoundsFactoryData - Class in org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant
 
ShortConstantValueImageJ2OutOfBoundsFactoryData() - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.ShortConstantValueImageJ2OutOfBoundsFactoryData
 
ShortConstantValueImageJ2OutOfBoundsFactoryData(OutOfBoundsConstantValueFactory<?, ?>) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.ShortConstantValueImageJ2OutOfBoundsFactoryData
 
ShortConstantValueImageJ2OutOfBoundsFactoryData(ShortConstantValueImageJ2OutOfBoundsFactoryData) - Constructor for class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.ShortConstantValueImageJ2OutOfBoundsFactoryData
 
ShortParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives
 
ShortParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.ShortParameterImageJ2ModuleInput
 
ShortParameterImageJ2ModuleOutput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives
 
ShortParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.ShortParameterImageJ2ModuleOutput
 
ShortParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Info for Short
ShortParameterTypeInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.ShortParameterTypeInfo
 
ShortPrimitiveParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Info for Short
ShortPrimitiveParameterTypeInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.ShortPrimitiveParameterTypeInfo
 
shouldDraw(Object, Object) - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIElementDrawingMode
 
shouldFillGap(int, int, int, int) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
shouldPadTabRun(int, int) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
shouldRefreshToCache() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCachedDataDisplayCacheControl
 
shouldRotateTabRuns(int, int) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
show(JIPipeDataSlot, JIPipeDataTableMetadataRow, String, Path, String, String, String, JIPipeWorkbench, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataDisplayWrapperImportOperation
 
show(JIPipeDataSlot, JIPipeDataTableMetadataRow, String, Path, String, String, String, JIPipeWorkbench, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.data.JIPipeDataImportOperation
Imports the data and shows it
show(JIPipeDataSlot, JIPipeDataTableMetadataRow, String, Path, String, String, String, JIPipeWorkbench, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.core.data.CopyContainingFolderDataImportOperation
 
show(JIPipeDataSlot, JIPipeDataTableMetadataRow, String, Path, String, String, String, JIPipeWorkbench, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.core.data.OpenContainingFolderDataImportOperation
 
show(JIPipeDataSlot, JIPipeDataTableMetadataRow, String, Path, String, String, String, JIPipeWorkbench, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.core.data.OpenInNativeApplicationDataImportOperation
 
showConfirmDialog(Component, String, Dimension, Component) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
showConnectionErrorMessage(Component, JIPipeDataSlot, JIPipeDataSlot) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
showCurrentFilesCollection() - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeImageJPluginManager
 
showDataError(JLabel) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
showDialog(Component) - Static method in class org.hkijena.jipipe.extensions.expressions.FunctionSelectorList
 
showDialog(Component, ExpressionEvaluator) - Static method in class org.hkijena.jipipe.extensions.expressions.OperatorSelectorList
 
showDialog(Component, String, Set<JIPipeExpressionParameterVariableInfo>) - Static method in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderUI
 
showDialog(Component, Set<JIPipeExpressionParameterVariableInfo>) - Static method in class org.hkijena.jipipe.extensions.expressions.VariableSelectorList
 
showDialog(Component, JIPipeHistoryJournal, JIPipeGraphNode, JIPipeSlotType) - Static method in class org.hkijena.jipipe.ui.components.AddAlgorithmSlotPanel
Shows a dialog for adding slots
showDialog(JIPipeWorkbench, Component, JIPipeDynamicParameterCollection) - Static method in class org.hkijena.jipipe.ui.components.AddParameterDialog
Shows a dialog for adding slots
showDialog(Component, String) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
showDialog(Component, JIPipeHistoryJournal, JIPipeDataSlot) - Static method in class org.hkijena.jipipe.ui.components.EditAlgorithmSlotPanel
Shows a dialog for adding slots
showDialog(MarkdownDocument, boolean, String, Component, boolean) - Static method in class org.hkijena.jipipe.ui.components.markdown.MarkdownReader
 
showDialog(Component, DynamicEnumParameter<T>, Object, String) - Static method in class org.hkijena.jipipe.ui.components.PickDynamicEnumValueDialog
 
showDialog(Component, List<Object>, EnumItemInfo, Object, String) - Static method in class org.hkijena.jipipe.ui.components.PickEnumValueDialog
 
showDialog(Component, JIPipeDataTypePicker.Mode, Set<JIPipeDataInfo>) - Static method in class org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker
Shows a dialog to data types
showDialog(Component, String, Set<String>) - Static method in class org.hkijena.jipipe.ui.components.pickers.JIPipeIconPickerDialog
Picks an icon name using a dialog
showDialog(Component, JIPipeNodeInfoPicker.Mode, Set<JIPipeNodeInfo>) - Static method in class org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker
Shows a dialog to pick nodes
showDialog() - Method in class org.hkijena.jipipe.ui.components.pickers.PickerDialog
 
showDialog(Component, Set<JIPipeGraphNode>, JIPipeGraphNode, String) - Static method in class org.hkijena.jipipe.ui.components.pickers.PickNodeDialog
Shows a dialog for selecting an algorithm
showDialog(JIPipeWorkbench, JIPipeParameterCollection, MarkdownDocument, String, int) - Static method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
Shows a parameter collection inside a modal dialog
showDialog(JIPipeWorkbench, Component, JIPipeParameterCollection, MarkdownDocument, String, int) - Static method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
Shows a parameter collection inside a modal dialog
showDialog(JIPipeWorkbench, Path, Set<JIPipeDependency>, Set<JIPipeImageJUpdateSiteDependency>) - Static method in class org.hkijena.jipipe.ui.project.InvalidProjectDependenciesInfoDialog
Shows the dialog
showDialog(Component, String, Component, String, Dimension) - Static method in class org.hkijena.jipipe.utils.OKCancelDialog
 
showDocumentation(MarkdownDocument) - Method in class org.hkijena.jipipe.ui.components.FormPanel
 
showErrorUI() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.algorithms.CachedTrackmateAlgorithmViewerWindow
 
showErrorUI() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerCacheDataViewerWindow
 
showErrorUI() - Method in class org.hkijena.jipipe.extensions.multiparameters.datatypes.CachedParametersDataViewerWindow
 
showErrorUI() - Method in class org.hkijena.jipipe.extensions.plots.CachedPlotViewerWindow
 
showErrorUI() - Method in class org.hkijena.jipipe.extensions.strings.CachedTextViewerWindow
 
showErrorUI() - Method in class org.hkijena.jipipe.extensions.tables.display.CachedTableViewerWindow
 
showErrorUI() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
Instruction to add the error UI By default, it will update the standard error label and revalidate the toolbar
showExtensionDetails(JIPipePlugin) - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManagerUI
 
showGuides() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.FloodFillMaskDrawer2DTool
 
showGuides() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawer2DTool
 
showGuides() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MouseMaskDrawer2DTool
 
showImage(JIPipeWorkbench, ImagePlus, String) - Static method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
Opens the image in a new frame
showInCompartmentGraph() - Method in interface org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeUIContextAction
Determines if the item is displayed in the compartment graph.
showInGraphCompartment() - Method in interface org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeUIContextAction
Determines if the item is displayed in the graph compartment (project/group/extension editor).
showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphCopyNodeUIContextAction
 
showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphCutNodeUIContextAction
 
showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphDuplicateNodeUIContextAction
 
showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphDuplicateWithInputConnectionsNodeUIContextAction
 
showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.clipboard.AlgorithmGraphPasteNodeUIContextAction
 
showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentCopyNodeUIContextAction
 
showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentCutNodeUIContextAction
 
showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.contextmenu.clipboard.GraphCompartmentPasteNodeUIContextAction
 
showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.InvertSelectionNodeUIContextAction
 
showInMultiSelectionPanel() - Method in interface org.hkijena.jipipe.ui.grapheditor.general.contextmenu.NodeUIContextAction
Determines if the item should be shown in the multi-node selection panel
showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SelectAllNodeUIContextAction
 
showInMultiSelectionPanel() - Method in class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.SetNodeHotkeyContextAction
 
showLog(JIPipeRunnableLogEntry) - Method in class org.hkijena.jipipe.ui.running.JIPipeLogViewer
 
showOKCancelDialog(Component, Component, String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Shows a component in a JIPipe-styled dialog with OK and Cancel button
showOpenDialog(Component) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
showPickerDialog(Component, JIPipeParameterTree, String) - Static method in class org.hkijena.jipipe.ui.components.ParameterTreeUI
Picks a node or parameter
showSaveDialog(Component) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
showSlide(String) - Method in class org.hkijena.jipipe.utils.ui.DotSlideshow
 
showSplash(Context) - Method in class org.hkijena.jipipe.ui.components.SplashScreen
 
shutdown() - Method in class org.hkijena.jipipe.api.JIPipeFixedThreadPool
Forces the thread pool to shut down
SignColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a floor function
SignColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.SignColumnOperation
 
signed - Variable in enum org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetType
true for integral signed types and floats, false for unsigned integral types.
SimpleFileAnnotationGenerator - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Generates annotations from filenames
SimpleFileAnnotationGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.SimpleFileAnnotationGenerator
New instance
SimpleFileAnnotationGenerator(SimpleFileAnnotationGenerator) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.SimpleFileAnnotationGenerator
Copies the algorithm
SimpleFolderAnnotationGenerator - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Algorithm that generates annotations from folder names
SimpleFolderAnnotationGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.SimpleFolderAnnotationGenerator
Creates a new instance
SimpleFolderAnnotationGenerator(SimpleFolderAnnotationGenerator) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.SimpleFolderAnnotationGenerator
Copies the algorithm
SimpleFormGeneratorAlgorithm - Class in org.hkijena.jipipe.extensions.forms.algorithms
 
SimpleFormGeneratorAlgorithm(JIPipeNodeInfo, FormData) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.SimpleFormGeneratorAlgorithm
Constructor for a new instance
SimpleFormGeneratorAlgorithm(SimpleFormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.SimpleFormGeneratorAlgorithm
 
SimpleImageAndRoiIteratingAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
Image processor algorithm that optionally takes a ROI
SimpleImageAndRoiIteratingAlgorithm(JIPipeNodeInfo, Class<? extends ImagePlusData>, Class<? extends ImagePlusData>) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.SimpleImageAndRoiIteratingAlgorithm
 
SimpleImageAndRoiIteratingAlgorithm(SimpleImageAndRoiIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.SimpleImageAndRoiIteratingAlgorithm
 
SimpleIteratingFormProcessorAlgorithm - Class in org.hkijena.jipipe.extensions.forms.algorithms
 
SimpleIteratingFormProcessorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.SimpleIteratingFormProcessorAlgorithm
 
SimpleIteratingFormProcessorAlgorithm(SimpleIteratingFormProcessorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.SimpleIteratingFormProcessorAlgorithm
 
SimpleIteratingJythonScriptAlgorithm - Class in org.hkijena.jipipe.extensions.python.algorithms
An algorithm that allows to run Python code
SimpleIteratingJythonScriptAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.python.algorithms.SimpleIteratingJythonScriptAlgorithm
Creates a new instance
SimpleIteratingJythonScriptAlgorithm(SimpleIteratingJythonScriptAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.python.algorithms.SimpleIteratingJythonScriptAlgorithm
Creates a copy
simpleOMEExport(ImagePlus, Path) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.OMEImageData
Copy of the run method in Exporter, as the plugin code really depends on some UI interaction We also simplified the code, as JIPipe outputs very standard files
simpleOMEImport(Path) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.OMEImageData
 
SimplePathAnnotationGenerator - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Algorithm that generates annotations from folder names
SimplePathAnnotationGenerator(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.SimplePathAnnotationGenerator
Creates a new instance
SimplePathAnnotationGenerator(SimplePathAnnotationGenerator) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.SimplePathAnnotationGenerator
Copies the algorithm
simplify() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
Simplifies the graph by only keeping (degree 0 or 1) and branching points (degree more than 2).
simplifyAndMinimize(Set<JIPipeDependency>, boolean) - Static method in interface org.hkijena.jipipe.JIPipeDependency
Flattens the hierarchy of dependencies into a list and removes large metadata (e.g. thumbnails)
SimplifyAnnotationsAlgorithm - Class in org.hkijena.jipipe.extensions.annotation.algorithms
 
SimplifyAnnotationsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.SimplifyAnnotationsAlgorithm
 
SimplifyAnnotationsAlgorithm(SimplifyAnnotationsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.SimplifyAnnotationsAlgorithm
 
SimplifyAnnotationsAlgorithm.AnnotationRemovalMode - Enum in org.hkijena.jipipe.extensions.annotation.algorithms
 
SimplifyFilamentsAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.process
 
SimplifyFilamentsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.SimplifyFilamentsAlgorithm
 
SimplifyFilamentsAlgorithm(SimplifyFilamentsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.SimplifyFilamentsAlgorithm
 
SineColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a sine function
SineColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.SineColumnOperation
 
SingleAlgorithmDebug - Class in org.hkijena.jipipe
 
SingleAlgorithmDebug() - Constructor for class org.hkijena.jipipe.SingleAlgorithmDebug
 
SingleAnnotationIOSettings - Class in org.hkijena.jipipe.extensions.forms.utils
Settings group for single annotation I/O
SingleAnnotationIOSettings() - Constructor for class org.hkijena.jipipe.extensions.forms.utils.SingleAnnotationIOSettings
 
SingleAnnotationIOSettings(SingleAnnotationIOSettings) - Constructor for class org.hkijena.jipipe.extensions.forms.utils.SingleAnnotationIOSettings
 
SingleExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.expressions
ExpressionParameterVariablesInfo that contains exactly one variable.
SingleExpressionParameterVariablesInfo(String, String, String) - Constructor for class org.hkijena.jipipe.extensions.expressions.SingleExpressionParameterVariablesInfo
 
SingleExpressionParameterVariablesInfo(JIPipeExpressionParameterVariableInfo) - Constructor for class org.hkijena.jipipe.extensions.expressions.SingleExpressionParameterVariablesInfo
 
SingleFileSelectionPanel - Class in org.hkijena.jipipe.ui.ijupdater
Opened when selecting one file
SingleFileSelectionPanel(JIPipeWorkbench, ManagerUI, FileObject) - Constructor for class org.hkijena.jipipe.ui.ijupdater.SingleFileSelectionPanel
 
SingleImageJAlgorithmRunConfiguration - Class in org.hkijena.jipipe.api.compat
Manages a single algorithm run
SingleImageJAlgorithmRunConfiguration(String, String, String, String, int) - Constructor for class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration
 
SingleImageJAlgorithmRunConfiguration(JIPipeGraphNode) - Constructor for class org.hkijena.jipipe.api.compat.SingleImageJAlgorithmRunConfiguration
 
SingleIterationStepCheckerAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps
 
SingleIterationStepCheckerAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm
 
SingleIterationStepCheckerAlgorithm(SingleIterationStepCheckerAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.iterationsteps.SingleIterationStepCheckerAlgorithm
 
SingleSelectionModel - Class in org.hkijena.jipipe.ui.components
Selection model for single selections
SingleSelectionModel() - Constructor for class org.hkijena.jipipe.ui.components.SingleSelectionModel
 
SingletonTab(Icon, DocumentTabPane.CloseMode, Supplier<Component>, String) - Constructor for class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.SingletonTab
 
size() - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache
 
size() - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache
 
size() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
size() - Method in class org.hkijena.jipipe.api.nodes.database.WeightedTokens
 
size() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration
 
size - Variable in enum org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetType
Element size in bytes.
size() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.LUTData
 
SIZE - Static variable in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.ThumbRenderer
 
SIZE - Static variable in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl.ThumbRenderer
 
SIZE - Static variable in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI.ThumbRenderer
 
size() - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
size() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
The size of the queue (includes the currently running JIPipeGraphRun
SizeFitMode - Enum in org.hkijena.jipipe.utils
 
SKELETONS_TABLE_OUTPUT_SLOT - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm
 
SkeletonToFilaments2DAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.generate
 
SkeletonToFilaments2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.SkeletonToFilaments2DAlgorithm
 
SkeletonToFilaments2DAlgorithm(SkeletonToFilaments2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.SkeletonToFilaments2DAlgorithm
 
SkeletonToFilaments3DAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.generate
 
SkeletonToFilaments3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.SkeletonToFilaments3DAlgorithm
 
SkeletonToFilaments3DAlgorithm(SkeletonToFilaments3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.SkeletonToFilaments3DAlgorithm
 
SkeletonToSimplifiedFilamentsFijiAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.generate
 
SkeletonToSimplifiedFilamentsFijiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.SkeletonToSimplifiedFilamentsFijiAlgorithm
 
SkeletonToSimplifiedFilamentsFijiAlgorithm(SkeletonToSimplifiedFilamentsFijiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.generate.SkeletonToSimplifiedFilamentsFijiAlgorithm
 
SleepAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms
 
SleepAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.SleepAlgorithm
 
SleepAlgorithm(SleepAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.SleepAlgorithm
 
slice(Collection<Integer>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Creates a new instance that contains only the selected rows.
SliceAfterFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
SliceAfterFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.SliceAfterFunction
 
SliceBeforeFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
SliceBeforeFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.SliceBeforeFunction
 
SliceFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
SliceFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.SliceFunction
 
SlicerControlsPlugin3D - Class in org.hkijena.jipipe.extensions.imageviewer.plugins3d
 
SlicerControlsPlugin3D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D
 
SlicerControlsPlugin3D.ApplyMultiOrthoSlicerRun - Class in org.hkijena.jipipe.extensions.imageviewer.plugins3d
 
SlicerControlsPlugin3D.ApplyOrthoSlicerRun - Class in org.hkijena.jipipe.extensions.imageviewer.plugins3d
 
SlicerControlsPlugin3D.MultiOrthoSlicerSettings - Class in org.hkijena.jipipe.extensions.imageviewer.plugins3d
 
SlicerControlsPlugin3D.OrthoSliderPanel - Class in org.hkijena.jipipe.extensions.imageviewer.plugins3d
 
SliceROIListAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter
Wrapper around RoiManager
SliceROIListAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.SliceROIListAlgorithm
Instantiates a new node type.
SliceROIListAlgorithm(SliceROIListAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.SliceROIListAlgorithm
Instantiates a new node type.
SliceTableRowsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.filter
 
SliceTableRowsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.filter.SliceTableRowsAlgorithm
 
SliceTableRowsAlgorithm(SliceTableRowsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.filter.SliceTableRowsAlgorithm
 
SLOT_FORMS - Static variable in class org.hkijena.jipipe.extensions.forms.algorithms.IteratingFormProcessorAlgorithm
 
SLOT_INPUT_MASK - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
SLOT_INPUT_ROI - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
SLOT_OUTPUT_WARNINGS - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.colocalization.Coloc2Node
 
SLOT_PARAMETERS - Static variable in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm
 
SlotConfigurationChangedEvent(JIPipeSlotConfiguration) - Constructor for class org.hkijena.jipipe.api.data.JIPipeSlotConfiguration.SlotConfigurationChangedEvent
Creates a new instance
SlotConfigurationChangedEventEmitter() - Constructor for class org.hkijena.jipipe.api.data.JIPipeSlotConfiguration.SlotConfigurationChangedEventEmitter
 
SlotMapParameterCollection - Class in org.hkijena.jipipe.extensions.parameters.api.graph
Parameter that holds a value for each data slot
SlotMapParameterCollection(Class<?>, JIPipeGraphNode, Function<JIPipeDataSlotInfo, Object>, boolean) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.graph.SlotMapParameterCollection
Creates a new instance
slotName() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeInputSlot
 
slotName() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeOutputSlot
 
SmallButtonAction - Class in org.hkijena.jipipe.ui.components.ribbon
 
SmallButtonAction(String, String, Icon, Runnable) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.SmallButtonAction
 
SmallButtonAction(String, String, Icon, JMenuItem...) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.SmallButtonAction
 
SmallToggleButtonAction - Class in org.hkijena.jipipe.ui.components.ribbon
 
SmallToggleButtonAction(String, String, Icon) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.SmallToggleButtonAction
 
SmallToggleButtonAction(String, String, Icon, boolean, Consumer<JToggleButton>) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.SmallToggleButtonAction
 
smooth(double, double, double, boolean, JIPipeExpressionParameter) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
SmoothFilamentsAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.process
 
SmoothFilamentsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.SmoothFilamentsAlgorithm
 
SmoothFilamentsAlgorithm(SmoothFilamentsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.process.SmoothFilamentsAlgorithm
 
snapshot(String, String, UUID, Icon) - Method in class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal
 
Snapshot(JIPipeDedicatedGraphHistoryJournal, LocalDateTime, String, String, Icon, JIPipeGraph) - Constructor for class org.hkijena.jipipe.api.history.JIPipeDedicatedGraphHistoryJournal.Snapshot
 
snapshot(String, String, UUID, Icon) - Method in class org.hkijena.jipipe.api.history.JIPipeDummyGraphHistoryJournal
 
snapshot(String, String, UUID, Icon) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Creates a new snapshot in the history journal
snapshot(String, String, UUID, Icon) - Method in class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal
 
Snapshot(JIPipeProjectHistoryJournal, LocalDateTime, String, String, Icon, JIPipeGraph, JIPipeGraph) - Constructor for class org.hkijena.jipipe.api.history.JIPipeProjectHistoryJournal.Snapshot
 
snapshotBeforeAddCompartment(String) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Create a snapshot for adding a node
snapshotBeforeAddNode(JIPipeGraphNode, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Create a snapshot for adding a node
snapshotBeforeAddNodes(Collection<JIPipeGraphNode>, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Create a snapshot for adding a node
snapshotBeforeAddSlot(JIPipeGraphNode, JIPipeDataSlotInfo, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Snapshot before adding a slot
snapshotBeforeConnect(JIPipeDataSlot, JIPipeDataSlot, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Snapshot before connecting two slots
snapshotBeforeCutCompartment(JIPipeProjectCompartment) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Snapshot before cutting a compartment
snapshotBeforeCutNodes(Set<JIPipeGraphNode>, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Snapshot before cutting a compartment
snapshotBeforeDisconnect(JIPipeDataSlot, JIPipeDataSlot, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Snapshot before disconnecting two slots
snapshotBeforeDisconnectAll(JIPipeDataSlot, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Snapshot before disconnecting two slots
snapshotBeforeEditSlot(JIPipeDataSlot, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Create snapshot before a slot edit
snapshotBeforeLabelSlot(JIPipeDataSlot, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Snapshot before adding a slot
snapshotBeforeMoveNodes(Set<JIPipeGraphNode>, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Create a snapshot for moving nodes
snapshotBeforeMoveSlot(JIPipeDataSlot, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Snapshot before adding a slot
snapshotBeforePasteNodes(Collection<JIPipeGraphNode>, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Create a snapshot for adding a node
snapshotBeforeRemoveCompartment(JIPipeProjectCompartment) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Create a snapshot for removing a node
snapshotBeforeRemoveNode(JIPipeGraphNode, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Create a snapshot for removing a node
snapshotBeforeRemoveNodes(Collection<JIPipeGraphNode>, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Create a snapshot for adding a node
snapshotBeforeRemoveSlot(JIPipeGraphNode, JIPipeDataSlotInfo, UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Snapshot before adding a slot
SnapshotSettings - Class in org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d
 
SnapshotSettings() - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.SnapshotSettings
 
SobelEdgeDetectorAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge
Wrapper around ImageProcessor
SobelEdgeDetectorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.SobelEdgeDetectorAlgorithm
Instantiates a new node type.
SobelEdgeDetectorAlgorithm(SobelEdgeDetectorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.SobelEdgeDetectorAlgorithm
Instantiates a new node type.
softClear(UUID, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache
Removes the cached data of a node without modifying the internal structure Remove outdated will be able to remove these
SolidColorIcon - Class in org.hkijena.jipipe.ui.components.icons
Icon that is only one specific color, including border
SolidColorIcon() - Constructor for class org.hkijena.jipipe.ui.components.icons.SolidColorIcon
Creates a 16x16 black icon
SolidColorIcon(int, int) - Constructor for class org.hkijena.jipipe.ui.components.icons.SolidColorIcon
Creates a black icon
SolidColorIcon(int, int, Color) - Constructor for class org.hkijena.jipipe.ui.components.icons.SolidColorIcon
Creates an icon with black borders
SolidColorIcon(int, int, Color, Color) - Constructor for class org.hkijena.jipipe.ui.components.icons.SolidColorIcon
 
SortAndExtractRoiByStatisticsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort
Deprecated.
SortAndExtractRoiByStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm
Deprecated.
Instantiates a new node type.
SortAndExtractRoiByStatisticsAlgorithm(SortAndExtractRoiByStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm
Deprecated.
Instantiates a new node type.
SortAndExtractRoiByStatisticsAlgorithm2 - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort
Wrapper around RoiManager
SortAndExtractRoiByStatisticsAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2
Instantiates a new node type.
SortAndExtractRoiByStatisticsAlgorithm2(SortAndExtractRoiByStatisticsAlgorithm2) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2
Instantiates a new node type.
SortAscendingArrayFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
SortAscendingArrayFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.SortAscendingArrayFunction
 
SortAscendingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Sorts the items ascending
SortAscendingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.SortAscendingColumnOperation
 
SortDescendingArrayFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
SortDescendingArrayFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.SortDescendingArrayFunction
 
SortDescendingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Sorts the items ascending
SortDescendingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.SortDescendingColumnOperation
 
SortEntry() - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByExpressionAlgorithm.SortEntry
 
SortEntry(SortRowsByExpressionAlgorithm.SortEntry) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByExpressionAlgorithm.SortEntry
 
SortOrder - Enum in org.hkijena.jipipe.extensions.parameters.library.util
Sort orders
SortRoiListByExpressionsAndMeasurementsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort
 
SortRoiListByExpressionsAndMeasurementsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm
 
SortRoiListByExpressionsAndMeasurementsAlgorithm(SortRoiListByExpressionsAndMeasurementsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm
 
SortRoiListByExpressionsAndMeasurementsAlgorithm.VariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort
 
SortRowsByAnnotationsAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms
 
SortRowsByAnnotationsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByAnnotationsAlgorithm
 
SortRowsByAnnotationsAlgorithm(SortRowsByAnnotationsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByAnnotationsAlgorithm
 
SortRowsByExpressionAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms
 
SortRowsByExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByExpressionAlgorithm
 
SortRowsByExpressionAlgorithm(SortRowsByExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.SortRowsByExpressionAlgorithm
 
SortRowsByExpressionAlgorithm.SortEntry - Class in org.hkijena.jipipe.extensions.utils.algorithms
 
SortTableColumnsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.columns
Algorithm that integrates columns
SortTableColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.SortTableColumnsAlgorithm
Creates a new instance
SortTableColumnsAlgorithm(SortTableColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.columns.SortTableColumnsAlgorithm
Creates a copy
SortTableRowsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.rows
Algorithm that integrates columns
SortTableRowsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.rows.SortTableRowsAlgorithm
Creates a new instance
SortTableRowsAlgorithm(SortTableRowsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.rows.SortTableRowsAlgorithm
Creates a copy
SOURCE_EXTENSION - Static variable in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
SOURCE_USER - Static variable in class org.hkijena.jipipe.api.JIPipeNodeTemplate
 
SourceWrapMode - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.parameters
 
spatialBlurLinear(BufferedImage, Point, Point, double) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils
 
SplashScreen - Class in org.hkijena.jipipe.ui.components
 
SplashScreen() - Constructor for class org.hkijena.jipipe.ui.components.SplashScreen
 
splitAll() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Splits all ShapeRoi that consist of multiple sub-Roi into their individual sub-Roi.
splitBy(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Splits this table into multiple tables according to an internal or external column
SplitByAnnotation - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Algorithm that splits the input data by a specified annotation
SplitByAnnotation(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.SplitByAnnotation
 
SplitByAnnotation(SplitByAnnotation) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.SplitByAnnotation
Copies the algorithm
SplitByAnnotationScript - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Algorithm that annotates all data with the same annotation
SplitByAnnotationScript(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.SplitByAnnotationScript
 
SplitByAnnotationScript(SplitByAnnotationScript) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.SplitByAnnotationScript
Copies the algorithm
SplitByDimensionAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions
 
SplitByDimensionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm
 
SplitByDimensionAlgorithm(SplitByDimensionAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.SplitByDimensionAlgorithm
 
SplitChannelsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color
Deprecated.
SplitChannelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsAlgorithm
Deprecated.
Instantiates a new node type.
SplitChannelsAlgorithm(SplitChannelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsAlgorithm
Deprecated.
Creates a copy
SplitChannelsByTableAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color
Wrapper around ChannelSplitter
SplitChannelsByTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
Instantiates a new node type.
SplitChannelsByTableAlgorithm(SplitChannelsByTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
Creates a copy
SplitFilamentsIntoConnectedComponentsAlgorithm - Class in org.hkijena.jipipe.extensions.ijfilaments.nodes.split
 
SplitFilamentsIntoConnectedComponentsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.split.SplitFilamentsIntoConnectedComponentsAlgorithm
 
SplitFilamentsIntoConnectedComponentsAlgorithm(SplitFilamentsIntoConnectedComponentsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.nodes.split.SplitFilamentsIntoConnectedComponentsAlgorithm
 
SplitImpAlphaChannelAlgorithm - Class in org.hkijena.jipipe.extensions.imp.nodes
 
SplitImpAlphaChannelAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imp.nodes.SplitImpAlphaChannelAlgorithm
 
SplitImpAlphaChannelAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imp.nodes.SplitImpAlphaChannelAlgorithm
 
splitIntoSlices(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
SplitRGBChannelsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color
 
SplitRGBChannelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitRGBChannelsAlgorithm
 
SplitRGBChannelsAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitRGBChannelsAlgorithm
 
SplitRoi3DIntoConnectedComponentsAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split
 
SplitRoi3DIntoConnectedComponentsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
SplitRoi3DIntoConnectedComponentsAlgorithm(SplitRoi3DIntoConnectedComponentsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.split.SplitRoi3DIntoConnectedComponentsAlgorithm
 
SplitRoiAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.split
Wrapper around RoiManager
SplitRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.split.SplitRoiAlgorithm
Instantiates a new node type.
SplitRoiAlgorithm(SplitRoiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.split.SplitRoiAlgorithm
Instantiates a new node type.
SplitRoiConnectedComponentsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi
 
SplitRoiConnectedComponentsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
SplitRoiConnectedComponentsAlgorithm(SplitRoiConnectedComponentsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm
 
SplitRoiConnectedComponentsAlgorithm.DimensionOperation - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi
 
SplitRoiConnectedComponentsAlgorithm.GraphPostprocessingVariables - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi
 
SplitSpotsNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots
 
SplitSpotsNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SplitSpotsNode
 
SplitSpotsNode(SplitSpotsNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SplitSpotsNode
 
SplitTableByColumnsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.split
Algorithm that integrates columns
SplitTableByColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableByColumnsAlgorithm
Creates a new instance
SplitTableByColumnsAlgorithm(SplitTableByColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableByColumnsAlgorithm
Creates a copy
SplitTableIntoColumnsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.split
Algorithm that integrates columns
SplitTableIntoColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableIntoColumnsAlgorithm
Creates a new instance
SplitTableIntoColumnsAlgorithm(SplitTableIntoColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableIntoColumnsAlgorithm
Creates a copy
SplitTableIntoRowsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.split
Algorithm that integrates columns
SplitTableIntoRowsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableIntoRowsAlgorithm
Creates a new instance
SplitTableIntoRowsAlgorithm(SplitTableIntoRowsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.split.SplitTableIntoRowsAlgorithm
Creates a copy
SplitTracksNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks
 
SplitTracksNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.SplitTracksNode
 
SplitTracksNode(SplitTracksNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.SplitTracksNode
 
SPOT_DETECTORS - Static variable in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackMateUtils
 
SPOT_TRACKERS - Static variable in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackMateUtils
 
SpotDetectorData - Class in org.hkijena.jipipe.extensions.ijtrackmate.datatypes
 
SpotDetectorData(SpotDetectorFactory<?>, Map<String, Object>) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotDetectorData
 
SpotDetectorData(SpotDetectorData) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotDetectorData
 
SpotDetectorNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots
 
SpotDetectorNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SpotDetectorNode
 
SpotDetectorNode(SpotDetectorNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SpotDetectorNode
 
SpotDrawer - Class in org.hkijena.jipipe.extensions.ijtrackmate.utils
 
SpotDrawer() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer
 
SpotDrawer(SpotDrawer) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotDrawer
 
SpotDrawer.LabelSettings - Class in org.hkijena.jipipe.extensions.ijtrackmate.utils
 
SpotFeature - Class in org.hkijena.jipipe.extensions.ijtrackmate.parameters
 
SpotFeature() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeature
 
SpotFeature(SpotFeature) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeature
 
SpotFeature(String) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeature
 
SpotFeature.Deserializer - Class in org.hkijena.jipipe.extensions.ijtrackmate.parameters
 
SpotFeatureFilterParameter - Class in org.hkijena.jipipe.extensions.ijtrackmate.parameters
 
SpotFeatureFilterParameter() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeatureFilterParameter
 
SpotFeatureFilterParameter(SpotFeature, double, boolean) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeatureFilterParameter
 
SpotFeatureFilterParameter(SpotFeatureFilterParameter) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeatureFilterParameter
 
SpotFeatureFilterParameter.List - Class in org.hkijena.jipipe.extensions.ijtrackmate.parameters
 
SpotFeaturePenaltyParameter - Class in org.hkijena.jipipe.extensions.ijtrackmate.parameters
 
SpotFeaturePenaltyParameter() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeaturePenaltyParameter
 
SpotFeaturePenaltyParameter(SpotFeature, double) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeaturePenaltyParameter
 
SpotFeaturePenaltyParameter(SpotFeaturePenaltyParameter) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeaturePenaltyParameter
 
SpotFeaturePenaltyParameter.List - Class in org.hkijena.jipipe.extensions.ijtrackmate.parameters
 
SpotFeaturePenaltyParameterListSettingsIO - Class in org.hkijena.jipipe.extensions.ijtrackmate.io
Maps a Map(String, Double) to a list of SpotFeaturePenaltyParameter
SpotFeaturePenaltyParameterListSettingsIO() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.io.SpotFeaturePenaltyParameterListSettingsIO
 
SpotFeatureVariablesInfo - Class in org.hkijena.jipipe.extensions.ijtrackmate.utils
 
SpotFeatureVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotFeatureVariablesInfo
 
SpotFilterNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots
 
SpotFilterNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SpotFilterNode
 
SpotFilterNode(SpotFilterNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SpotFilterNode
 
spotKeyToVariable(String) - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackSpotFeatureVariablesInfo
 
SpotListCellRenderer - Class in org.hkijena.jipipe.extensions.ijtrackmate.display.spots
 
SpotListCellRenderer(SpotsManagerPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotListCellRenderer
 
SpotsCollectionData - Class in org.hkijena.jipipe.extensions.ijtrackmate.datatypes
 
SpotsCollectionData(Model, Settings, ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotsCollectionData
 
SpotsCollectionData(ModelData) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotsCollectionData
 
SpotSegmentation3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.segmentation
 
SpotSegmentation3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm
 
SpotSegmentation3DAlgorithm(SpotSegmentation3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm
 
SpotSegmentation3DAlgorithm.SpotSegmentationMethod - Enum in org.hkijena.jipipe.extensions.ij3d.nodes.segmentation
 
SpotSegmentation3DAlgorithm.SpotSegmentationSettings - Class in org.hkijena.jipipe.extensions.ij3d.nodes.segmentation
 
SpotSegmentationSettings() - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm.SpotSegmentationSettings
 
SpotSegmentationSettings(SpotSegmentation3DAlgorithm.SpotSegmentationSettings) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm.SpotSegmentationSettings
 
SpotsManagerPlugin2D - Class in org.hkijena.jipipe.extensions.ijtrackmate.display.spots
 
SpotsManagerPlugin2D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotsManagerPlugin2D
 
SpotsManagerPlugin2D.SelectionContextPanel - Class in org.hkijena.jipipe.extensions.ijtrackmate.display.spots
 
SpotsManagerPlugin2D.SelectionInfoContextPanel - Class in org.hkijena.jipipe.extensions.ijtrackmate.display.spots
 
SpotsToRGBNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots
 
SpotsToRGBNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SpotsToRGBNode
 
SpotsToRGBNode(SpotsToRGBNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SpotsToRGBNode
 
SpotsToRoiConverter - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters
 
SpotsToRoiConverter() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.SpotsToRoiConverter
 
spotsToROIList() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotsCollectionData
 
spotsToROIList(SpotsCollectionData, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.converters.ConvertSpotsToRoiNode
 
SpotTrackerData - Class in org.hkijena.jipipe.extensions.ijtrackmate.datatypes
 
SpotTrackerData(SpotTrackerFactory, Map<String, Object>) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotTrackerData
 
SpotTrackerData(SpotTrackerData) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotTrackerData
 
spotVariableToKey(String) - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackSpotFeatureVariablesInfo
 
SqrtColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a square root function
SqrtColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.SqrtColumnOperation
 
SquareColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a square function
SquareColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.SquareColumnOperation
 
Stack2DExporterRun - Class in org.hkijena.jipipe.extensions.imageviewer.runs
 
Stack2DExporterRun(JIPipeImageViewer, Path, String, String) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.runs.Stack2DExporterRun
 
StackCombinerAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions
 
StackCombinerAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackCombinerAlgorithm
 
StackCombinerAlgorithm(StackCombinerAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackCombinerAlgorithm
 
StackedBarCategoryPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
A stacked bar plot Series table columns: Value (Double), Category (String), Group (String) Multiple series: No
StackedBarCategoryPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.StackedBarCategoryPlotData
Creates a new instance
StackedBarCategoryPlotData(StackedBarCategoryPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.StackedBarCategoryPlotData
Creates a copy
StackInverterAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions
Wrapper around ImageProcessor
StackInverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackInverterAlgorithm
Instantiates a new node type.
StackInverterAlgorithm(StackInverterAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackInverterAlgorithm
Instantiates a new node type.
StackSplitterAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions
Wrapper around ChannelArranger
StackSplitterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm
Instantiates a new node type.
StackSplitterAlgorithm(StackSplitterAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm
Creates a copy
StackTo2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions
Wrapper around ImageProcessor
StackTo2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm
Instantiates a new node type.
StackTo2DAlgorithm(StackTo2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm
Instantiates a new node type.
StackToDimensionMerger2Algorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions
Wrapper around ImageProcessor
StackToDimensionMerger2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackToDimensionMerger2Algorithm
Instantiates a new node type.
StackToDimensionMerger2Algorithm(StackToDimensionMerger2Algorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackToDimensionMerger2Algorithm
Instantiates a new node type.
StackToDimensionMergerAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions
Wrapper around ImageProcessor
StackToDimensionMergerAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackToDimensionMergerAlgorithm
Instantiates a new node type.
StackToDimensionMergerAlgorithm(StackToDimensionMergerAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackToDimensionMergerAlgorithm
Instantiates a new node type.
StackToMontage2Algorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage
Implementation of MontageMaker
StackToMontage2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontage2Algorithm
 
StackToMontage2Algorithm(StackToMontage2Algorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontage2Algorithm
 
StackToMontageAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage
Deprecated.
StackToMontageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
StackToMontageAlgorithm(StackToMontageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.montage.StackToMontageAlgorithm
Deprecated.
 
stageActivateUpdateSite(UpdateSite) - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeImageJPluginManager
 
STANDARD_DATA_OPERATIONS - Static variable in class org.hkijena.jipipe.extensions.plots.PlotsPlugin
 
STANDARD_EXTENSIONS - Static variable in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
Standard set of extension IDs (1.74.0+)
STANDARD_EXTENSIONS_LEGACY - Static variable in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
Standard set of extension IDs (for users updating from 1.73.x or older)
StandardParametersPlugin - Class in org.hkijena.jipipe.extensions.parameters
Provides some standard parameters
StandardParametersPlugin() - Constructor for class org.hkijena.jipipe.extensions.parameters.StandardParametersPlugin
 
StandardSettingsPlugin - Class in org.hkijena.jipipe.extensions.settings
Extension that provides all JIPipe included settings sheets
StandardSettingsPlugin() - Constructor for class org.hkijena.jipipe.extensions.settings.StandardSettingsPlugin
 
StandardView - Enum in org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d
 
start() - Method in class org.hkijena.jipipe.ui.components.icons.AnimatedIcon
 
start() - Method in class org.hkijena.jipipe.ui.components.icons.NewThrobberIcon
 
start(Process) - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationExecuteWatchdog
 
start() - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog
 
startAndJoin(Thread[]) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Hough_Circle
Start all given threads and wait on each of them until all are done.
StartedEvent(JIPipeRunnable, JIPipeRunWorker) - Constructor for class org.hkijena.jipipe.api.JIPipeRunnable.StartedEvent
 
StartedEventEmitter() - Constructor for class org.hkijena.jipipe.api.JIPipeRunnable.StartedEventEmitter
 
startRun() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunExecuterUI
Starts the run
startTransform() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.Hough_Circle
 
StatementOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
Operator that is used to make different statements The return value is the right statement
StatementOperator(int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.StatementOperator
 
StatisticalCategoryPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
Contains data for statistical plots.
StatisticalCategoryPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.StatisticalCategoryPlotData
Creates a new instance
StatisticalCategoryPlotData(StatisticalCategoryPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.StatisticalCategoryPlotData
Creates a copy
StatisticsAverageIntegratingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.integrating
Implements calculating the average
StatisticsAverageIntegratingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsAverageIntegratingColumnOperation
 
StatisticsCountIntegratingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.integrating
Implements calculating the number of rows
StatisticsCountIntegratingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsCountIntegratingColumnOperation
 
StatisticsCountNonZeroIntegratingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.integrating
Implements counting non-zero elements
StatisticsCountNonZeroIntegratingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsCountNonZeroIntegratingColumnOperation
 
StatisticsCumulativeSumColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.integrating
Implements calculating the cumulative sum Y_0=X_0; Y_i=Y_{i-1}+X_i
StatisticsCumulativeSumColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsCumulativeSumColumnOperation
 
StatisticsGeometricMeanIntegratingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.integrating
Implements calculating the geometric mean
StatisticsGeometricMeanIntegratingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsGeometricMeanIntegratingColumnOperation
 
StatisticsKurtosisIntegratingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.integrating
Implements calculating the kurtosis
StatisticsKurtosisIntegratingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsKurtosisIntegratingColumnOperation
 
StatisticsMaxIntegratingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.integrating
Implements calculating the max value
StatisticsMaxIntegratingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsMaxIntegratingColumnOperation
 
StatisticsMedianIntegratingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.integrating
Implements calculating the median value
StatisticsMedianIntegratingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsMedianIntegratingColumnOperation
 
StatisticsMinIntegratingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.integrating
Implements calculating the min value
StatisticsMinIntegratingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsMinIntegratingColumnOperation
 
StatisticsModeIntegratingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.integrating
Implements calculating the mode value (most common value)
StatisticsModeIntegratingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsModeIntegratingColumnOperation
 
StatisticsSkewnessIntegratingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.integrating
Implements calculating the skewness
StatisticsSkewnessIntegratingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsSkewnessIntegratingColumnOperation
 
StatisticsStandardDeviationIntegratingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.integrating
Implements calculating the standard deviation
StatisticsStandardDeviationIntegratingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsStandardDeviationIntegratingColumnOperation
 
StatisticsVarianceIntegratingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.integrating
Implements calculating the variance
StatisticsVarianceIntegratingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsVarianceIntegratingColumnOperation
 
StatisticsWeightedSumColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.integrating
Implements calculating the weighted sum sum_{i=1,2,...}
StatisticsWeightedSumColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsWeightedSumColumnOperation
 
StatusUpdatedEvent(JIPipeProgressInfo, int, int, String) - Constructor for class org.hkijena.jipipe.api.JIPipeProgressInfo.StatusUpdatedEvent
 
StatusUpdatedEventEmitter() - Constructor for class org.hkijena.jipipe.api.JIPipeProgressInfo.StatusUpdatedEventEmitter
 
stop() - Method in class org.hkijena.jipipe.ui.components.icons.AnimatedIcon
 
stop() - Method in class org.hkijena.jipipe.ui.components.icons.NewThrobberIcon
 
stop() - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationExecuteWatchdog
 
stop() - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog
 
stopCellEditing() - Method in class org.hkijena.jipipe.ui.tableeditor.TableEditor.NumberEditor
 
store(JIPipeGraphNode, UUID, JIPipeDataTable, String, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.api.cache.JIPipeCache
 
store(JIPipeGraphNode, UUID, JIPipeDataTable, String, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache
 
Store<T> - Interface in org.hkijena.jipipe.utils.data
Stores data.
StoredEvent(JIPipeCache, UUID, JIPipeDataTable, String) - Constructor for class org.hkijena.jipipe.api.cache.JIPipeCache.StoredEvent
 
StoredEventEmitter() - Constructor for class org.hkijena.jipipe.api.cache.JIPipeCache.StoredEventEmitter
 
StreamUtils - Class in org.hkijena.jipipe.utils
Utils for Java's stream API
StreamUtils() - Constructor for class org.hkijena.jipipe.utils.StreamUtils
 
stretchHistogram(ImagePlus, double, boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm
 
stretchHistogram(ImageProcessor, double, boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm
 
stretchHistogram(ImageProcessor, double, ImageStatistics, boolean) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm
 
StrikeThroughAction() - Constructor for class org.hkijena.jipipe.ui.components.html.HTMLEditor.StrikeThroughAction
Constructs a new StrikeThroughAction.
STRING - Static variable in class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
 
StringAndStringPairParameter - Class in org.hkijena.jipipe.extensions.parameters.library.pairs
A parameter that renames an integer into another integer
StringAndStringPairParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.StringAndStringPairParameter
Creates a new instance
StringAndStringPairParameter(String, String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.StringAndStringPairParameter
 
StringAndStringPairParameter(StringAndStringPairParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.StringAndStringPairParameter
Creates a copy
StringAndStringPairParameter.List - Class in org.hkijena.jipipe.extensions.parameters.library.pairs
A collection of multiple StringAndStringPairParameter
StringArrayColumnToTableConverter - Class in org.hkijena.jipipe.extensions.tables
Converts a column to a table
StringArrayColumnToTableConverter() - Constructor for class org.hkijena.jipipe.extensions.tables.StringArrayColumnToTableConverter
 
StringArrayParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays
 
StringArrayParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.arrays.StringArrayParameterImageJ2ModuleInput
 
StringArrayTableColumn - Class in org.hkijena.jipipe.extensions.tables.datatypes
TableColumn that contains doubles.
StringArrayTableColumn(String[], String) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.StringArrayTableColumn
Creates a new instance
StringData - Class in org.hkijena.jipipe.extensions.strings
A data type that contains a string
StringData(String) - Constructor for class org.hkijena.jipipe.extensions.strings.StringData
 
StringData(StringData) - Constructor for class org.hkijena.jipipe.extensions.strings.StringData
 
StringDataConverter - Class in org.hkijena.jipipe.extensions.strings
 
StringDataConverter(Class<? extends JIPipeData>) - Constructor for class org.hkijena.jipipe.extensions.strings.StringDataConverter
 
StringDefinitionDataSource - Class in org.hkijena.jipipe.extensions.strings.datasources
 
StringDefinitionDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.strings.datasources.StringDefinitionDataSource
 
StringDefinitionDataSource(StringDefinitionDataSource) - Constructor for class org.hkijena.jipipe.extensions.strings.datasources.StringDefinitionDataSource
 
StringEndsWithPredicateFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
StringEndsWithPredicateFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.StringEndsWithPredicateFunction
 
StringFirstIndexOfFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
StringFirstIndexOfFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.StringFirstIndexOfFunction
 
StringFixFileNameFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
StringFixFileNameFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.StringFixFileNameFunction
 
StringFormatFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
StringFormatFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.StringFormatFunction
 
StringFormData - Class in org.hkijena.jipipe.extensions.forms.datatypes
 
StringFormData() - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.StringFormData
 
StringFormData(StringFormData) - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.StringFormData
 
StringFormGeneratorAlgorithm - Class in org.hkijena.jipipe.extensions.forms.algorithms.generators
 
StringFormGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.generators.StringFormGeneratorAlgorithm
 
StringFormGeneratorAlgorithm(StringFormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.generators.StringFormGeneratorAlgorithm
 
StringJoinFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
StringJoinFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.StringJoinFunction
 
StringLastIndexOfFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
StringLastIndexOfFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.StringLastIndexOfFunction
 
StringList - Class in org.hkijena.jipipe.extensions.parameters.library.primitives.list
A list of String
StringList() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.list.StringList
Creates a new empty list
StringList(String...) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.list.StringList
Creates a new list from the provided items
StringList(Collection<String>) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.list.StringList
Creates a new list from the provided items
StringMapQueryExpression - Class in org.hkijena.jipipe.extensions.expressions
 
StringMapQueryExpression() - Constructor for class org.hkijena.jipipe.extensions.expressions.StringMapQueryExpression
 
StringMapQueryExpression(String) - Constructor for class org.hkijena.jipipe.extensions.expressions.StringMapQueryExpression
 
StringMapQueryExpression(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.extensions.expressions.StringMapQueryExpression
 
stringModelFromTableModel(TableModel) - Static method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Converts a table model into a string results table
StringOrDouble - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Can either filter a string or a double
StringOrDouble() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.StringOrDouble
Creates a new instance
StringOrDouble(StringOrDouble) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.StringOrDouble
Copies the object
StringOrDouble.List - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
A collection of multiple StringOrDouble The filters are connected via "OR"
StringOrDouble.Mode - Enum in org.hkijena.jipipe.extensions.parameters.library.primitives
Modes are that a column is picked or one is generated
StringOrDoubleParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
A parameter editor UI for StringOrDouble
StringOrDoubleParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.StringOrDoubleParameterEditorUI
 
StringParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.primitives
Parameter editor for String
StringParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.StringParameterEditorUI
 
StringParameterImageJ2ModuleInput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives
 
StringParameterImageJ2ModuleInput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.primitives.StringParameterImageJ2ModuleInput
 
StringParameterImageJ2ModuleOutput - Class in org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives
 
StringParameterImageJ2ModuleOutput() - Constructor for class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.primitives.StringParameterImageJ2ModuleOutput
 
StringParameterSettings - Annotation Type in org.hkijena.jipipe.extensions.parameters.library.primitives
Settings for String parameters
StringPatternExtraction - Class in org.hkijena.jipipe.extensions.parameters.library.patterns
A parameter that extracts a pattern from a string
StringPatternExtraction() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtraction
Creates a new instance
StringPatternExtraction(StringPatternExtraction) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtraction
Creates a copy
StringPatternExtraction.List - Class in org.hkijena.jipipe.extensions.parameters.library.patterns
A collection of multiple StringPatternExtraction
StringPatternExtraction.Mode - Enum in org.hkijena.jipipe.extensions.parameters.library.patterns
Available modes
StringPatternExtractionFunction - Class in org.hkijena.jipipe.extensions.parameters.api.functions
A function entry that applies pattern extraction to an String
StringPatternExtractionFunction() - Constructor for class org.hkijena.jipipe.extensions.parameters.api.functions.StringPatternExtractionFunction
Creates a new instance
StringPatternExtractionFunction(StringPatternExtractionFunction) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.functions.StringPatternExtractionFunction
Creates a copy
StringPatternExtractionFunction.List - Class in org.hkijena.jipipe.extensions.parameters.api.functions
StringPatternExtractionParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.library.patterns
StringPatternExtractionParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtractionParameterEditorUI
 
StringQueryExpression - Class in org.hkijena.jipipe.extensions.expressions
Expression for querying strings
StringQueryExpression() - Constructor for class org.hkijena.jipipe.extensions.expressions.StringQueryExpression
 
StringQueryExpression(String) - Constructor for class org.hkijena.jipipe.extensions.expressions.StringQueryExpression
 
StringQueryExpression(StringQueryExpression) - Constructor for class org.hkijena.jipipe.extensions.expressions.StringQueryExpression
 
StringQueryExpressionAndSortOrderPairParameter - Class in org.hkijena.jipipe.extensions.parameters.library.pairs
StringQueryExpressionAndSortOrderPairParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.StringQueryExpressionAndSortOrderPairParameter
Creates a new instance
StringQueryExpressionAndSortOrderPairParameter(StringQueryExpressionAndSortOrderPairParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.StringQueryExpressionAndSortOrderPairParameter
Creates a copy
StringQueryExpressionAndSortOrderPairParameter.List - Class in org.hkijena.jipipe.extensions.parameters.library.pairs
StringQueryExpressionAndStringPairParameter - Class in org.hkijena.jipipe.extensions.parameters.library.pairs
A parameter that renames a matching string into another string
StringQueryExpressionAndStringPairParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.StringQueryExpressionAndStringPairParameter
Creates a new instance
StringQueryExpressionAndStringPairParameter(String, String) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.StringQueryExpressionAndStringPairParameter
 
StringQueryExpressionAndStringPairParameter(StringQueryExpressionAndStringPairParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.StringQueryExpressionAndStringPairParameter
Creates a copy
StringQueryExpressionAndStringPairParameter.List - Class in org.hkijena.jipipe.extensions.parameters.library.pairs
StringQueryExpressionAndStringQueryPairParameter - Class in org.hkijena.jipipe.extensions.parameters.library.pairs
A parameter that renames a matching string into another string
StringQueryExpressionAndStringQueryPairParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.StringQueryExpressionAndStringQueryPairParameter
Creates a new instance
StringQueryExpressionAndStringQueryPairParameter(StringQueryExpressionAndStringQueryPairParameter) - Constructor for class org.hkijena.jipipe.extensions.parameters.library.pairs.StringQueryExpressionAndStringQueryPairParameter
Creates a copy
StringQueryExpressionAndStringQueryPairParameter.List - Class in org.hkijena.jipipe.extensions.parameters.library.pairs
StringQueryExpressionVariablesInfo - Class in org.hkijena.jipipe.extensions.expressions
Variables for querying strings
StringQueryExpressionVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.expressions.StringQueryExpressionVariablesInfo
 
StringRegexReplaceFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
StringRegexReplaceFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.StringRegexReplaceFunction
 
StringReplaceFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
StringReplaceFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.StringReplaceFunction
 
StringSliceBeforeFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
StringSliceBeforeFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.StringSliceBeforeFunction
 
StringSliceFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
StringSliceFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.StringSliceFunction
 
StringSplitFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
StringSplitFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.StringSplitFunction
 
StringsPlugin - Class in org.hkijena.jipipe.extensions.strings
Provides data types dor handling strings
StringsPlugin() - Constructor for class org.hkijena.jipipe.extensions.strings.StringsPlugin
 
StringStartsWithPredicateFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
StringStartsWithPredicateFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.StringStartsWithPredicateFunction
 
StringToLowerCaseFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
StringToLowerCaseFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.StringToLowerCaseFunction
 
StringToUpperCaseFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
StringToUpperCaseFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.StringToUpperCaseFunction
 
StringTrimFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
StringTrimFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.StringTrimFunction
 
StringTruncateFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.string
 
StringTruncateFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.string.StringTruncateFunction
 
StringUtils - Class in org.hkijena.jipipe.utils
Utilities for strings
STROKE_COMMENT - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
STROKE_COMMENT_HIGHLIGHT - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
STROKE_GUIDE_LINE - Static variable in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D
 
STROKE_MARQUEE - Static variable in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIPicker2DTool
 
STROKE_MARQUEE - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
STROKE_SELECTED - Static variable in class org.hkijena.jipipe.extensions.imageviewer.utils.CustomGradientThumbRenderer
 
STROKE_SELECTION - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
STROKE_SMART_EDGE - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
STROKE_UNIT - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
STROKE_UNIT_COMMENT - Static variable in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
StrongObjectSubscriber(Listener) - Constructor for class org.hkijena.jipipe.api.events.JIPipeEventEmitter.StrongObjectSubscriber
 
styleText(boolean, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.FancyPasswordField
 
styleText(boolean, boolean, boolean) - Method in class org.hkijena.jipipe.ui.components.FancyTextField
 
subList(int, int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
subList(int, int) - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
subscribe(Listener) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter
 
subscribeLambda(BiConsumer<JIPipeEventEmitter<Event, Listener>, Event>) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter
 
subscribeLambdaOnce(BiConsumer<JIPipeEventEmitter<Event, Listener>, Event>) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter
 
subscribeWeak(Listener) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter
 
SubscriptAction() - Constructor for class org.hkijena.jipipe.ui.components.html.HTMLEditor.SubscriptAction
Constructs a new StrikeThroughAction.
subtract(List<Double>, List<Double>) - Static method in class org.hkijena.jipipe.utils.VectorUtils
 
SubtractionFunctionOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
SubtractionFunctionOperator(int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.SubtractionFunctionOperator
 
SugiyamaGraphAutoLayoutMethod - Class in org.hkijena.jipipe.ui.grapheditor.general.layout
Applies auto-layout according to Sugiyama et al.
SugiyamaGraphAutoLayoutMethod() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.layout.SugiyamaGraphAutoLayoutMethod
 
SumIntegratingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.integrating
Implements calculating the sum
SumIntegratingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.integrating.SumIntegratingColumnOperation
 
SummarizeAnnotationsMapFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
SummarizeAnnotationsMapFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.SummarizeAnnotationsMapFunction
 
SummarizeMapFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.collections
 
SummarizeMapFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.collections.SummarizeMapFunction
 
SummarizeVariablesFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
SummarizeVariablesFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.SummarizeVariablesFunction
 
SuperscriptAction() - Constructor for class org.hkijena.jipipe.ui.components.html.HTMLEditor.SuperscriptAction
Constructs a new StrikeThroughAction.
supports(JIPipeGraphEditorUI) - Method in interface org.hkijena.jipipe.api.grapheditortool.JIPipeGraphEditorTool
 
supports(JIPipeGraphEditorUI) - Method in class org.hkijena.jipipe.api.grapheditortool.JIPipeRewireGraphEditorTool
 
supportsAllParameterTypes() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
 
supportsNativeImageImport(Path) - Static method in class org.hkijena.jipipe.utils.CoreImageJUtils
 
supportsParallelization() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeIteratingMissingDataGeneratorAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMissingDataGeneratorAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterlessSimpleIteratingAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSimpleIteratingAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.api.nodes.algorithm.JIPipeSingleIterationAlgorithm
 
supportsParallelization() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeParallelizedAlgorithm
Indicates to the algorithm base implementation if parallelization is supported.
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.ij3d.nodes.filters.Fast3DFiltersAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.nodes.spots.SpotDetectorNode
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.BoxFilter2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.BoxFilter3DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.GaussianBlur2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.GaussianBlur3DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurFilter2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurFilter3DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurGreyscale8U2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.blur.MedianBlurRGB2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.ArrangeChannelsAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.BlendImagesAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.InvertColorsAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.MergeChannelsAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.NewSplitChannelsAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.OverlayImagesAlgorithm
Deprecated.
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsAlgorithm
Deprecated.
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.SplitChannelsByTableAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.CLAHEContrastEnhancer
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.IlluminationCorrection2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve.ConvolveByImage2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convolve.ConvolveByParameter2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.CreateStackAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.NewZProjectorAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackInverterAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackSplitterAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackTo2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackToDimensionMerger2Algorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.StackToDimensionMergerAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.CannyEdgeDetectorAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.SobelEdgeDetectorAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.DifferenceOfGaussian2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.FrangiVesselnessFeatures
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LaplacianOfGaussian2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.MeijeringVesselness2DFeatures
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.fft.FFT2DForwardTransform
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.fft.FFT2DInverseTransform
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.fft.FFT2DSwapQuadrants
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawMaskAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.DrawROIAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateLUTImageFromColorMap
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingImageFromMathExpression2D
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateMissingZeroImage
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateStructureElement2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateStructureElement3DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.GenerateZeroImage
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.generate.ImageFromMatrix2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyMath2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyMathExpression2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyVectorMathExpression2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.distancemap.ApplyDistanceTransform2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.DivideByMaximumAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateFromMathExpression2D
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.GenerateVectorFromMathExpression
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.Hessian2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMaximumFilter2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMaximumFilter3DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMinimumFilter2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalMinimumFilter3DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalVarianceFilter2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.local.LocalVarianceFilter3DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.RemoveNaNFilter2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.Morphology3DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyFillHoles2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyInternalGradient2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyOutline2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologySkeletonize2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.AddNoise2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.AddSaltAndPepperNoise2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.DespeckleFilter2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.measure.CountROIAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.sharpen.LaplacianSharpen2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.BrightSpotsSegmentation2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CircularHoughSegmentation2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.FastCircularHoughSegmentation2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.HessianSegmentation2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.InternalGradientSegmentation2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.BernsenLocalAutoThreshold2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.ContrastLocalAutoThreshold2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.NiblackLocalAutoThreshold2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.PhansalkarLocalAutoThreshold2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.SauvolaLocalAutoThreshold2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold16U2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold32F2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ManualThreshold8U2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.PercentileThreshold8U2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ThresholdByAnnotation2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformFlip2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROImageAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.omero.nodes.download.DownloadOMEROTableAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROImageAlgorithm
 
supportsParallelization() - Method in class org.hkijena.jipipe.extensions.utils.algorithms.meta.RunJIPipeProjectAlgorithm
 
SwitchCaseFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.control
 
SwitchCaseFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.control.SwitchCaseFunction
 
SwitchFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.control
 
SwitchFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.control.SwitchFunction
 
SwitchMapFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.control
 
SwitchMapFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.control.SwitchMapFunction
 
switchTo2D() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
switchTo3D() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewer
 
switchToContent(Component) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Switches to the provided content
switchToLastTab() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Switches the the last tab.
switchToMode(ExpressionBuilderParameterUI.Mode) - Method in class org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderParameterUI
 
switchToTab(DocumentTabPane.DocumentTab) - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane
Switches to the provided tab
SymmetryFilter3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.features
 
SymmetryFilter3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.features.SymmetryFilter3DAlgorithm
 
SymmetryFilter3DAlgorithm(SymmetryFilter3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.features.SymmetryFilter3DAlgorithm
 

T

TAB_COMPARTMENT_EDITOR - Static variable in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
TAB_INTRODUCTION - Static variable in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
TAB_LICENSE - Static variable in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
TAB_LOG - Static variable in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
TAB_NOTIFICATIONS - Static variable in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
TAB_PLUGIN_MANAGER - Static variable in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
TAB_PLUGIN_VALIDITY_CHECK - Static variable in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
TAB_PROJECT_OVERVIEW - Static variable in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
TAB_VALIDITY_CHECK - Static variable in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
tabAreaBackground - Variable in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
TABBED_DOCUMENTATION - Static variable in class org.hkijena.jipipe.ui.components.FormPanel
Puts the documentation into a DocumentTabPane if WITH_DOCUMENTATION is active
TabbedPaneLayout() - Constructor for class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI.TabbedPaneLayout
 
TabExternalEditor(JIPipeWorkbench, WeakReference<JIPipeParameterCollection>, String, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameterEditorUI.TabExternalEditor
 
TableCellExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.expressions
 
TableCellExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.expressions.TableCellExpressionParameterVariablesInfo
 
TableCellValueExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.expressions
 
TableCellValueExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.expressions.TableCellValueExpressionParameterVariablesInfo
 
TableCellValueQueryExpression - Class in org.hkijena.jipipe.extensions.expressions
Expression for querying strings
TableCellValueQueryExpression() - Constructor for class org.hkijena.jipipe.extensions.expressions.TableCellValueQueryExpression
 
TableCellValueQueryExpression(String) - Constructor for class org.hkijena.jipipe.extensions.expressions.TableCellValueQueryExpression
 
TableCellValueQueryExpression(AbstractExpressionParameter) - Constructor for class org.hkijena.jipipe.extensions.expressions.TableCellValueQueryExpression
 
TableColumn - Interface in org.hkijena.jipipe.extensions.tables.datatypes
An JIPipeData type that represents a column.
TableColumnConversionParameter - Class in org.hkijena.jipipe.extensions.tables.parameters.enums
Enum-like parameter that allows the selection of a ConvertingColumnOperation.
TableColumnConversionParameter() - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnConversionParameter
Creates a new instance
TableColumnConversionParameter(TableColumnConversionParameter) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnConversionParameter
Creates a copy
TableColumnGeneratorParameter - Class in org.hkijena.jipipe.extensions.tables.parameters.enums
A parameter that allows the user to setup a table column generator
TableColumnGeneratorParameter() - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnGeneratorParameter
Creates a new instance
TableColumnGeneratorParameter(TableColumnGeneratorParameter) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnGeneratorParameter
Creates a copy
TableColumnGeneratorParameterEditorUI - Class in org.hkijena.jipipe.extensions.tables.parameters.enums
A parameter editor UI that works for all enumerations
TableColumnGeneratorParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnGeneratorParameterEditorUI
 
TableColumnGeneratorProcessor - Class in org.hkijena.jipipe.extensions.tables.parameters.processors
Processor-like parameter that maps a column generator to a string
TableColumnGeneratorProcessor() - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.processors.TableColumnGeneratorProcessor
Creates a new instance
TableColumnGeneratorProcessor(TableColumnGeneratorProcessor) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.processors.TableColumnGeneratorProcessor
Creates a copy
TableColumnGeneratorProcessorParameterList - Class in org.hkijena.jipipe.extensions.tables.parameters.collections
 
TableColumnGeneratorProcessorParameterList() - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.collections.TableColumnGeneratorProcessorParameterList
Creates a new instance
TableColumnGeneratorProcessorParameterList(TableColumnGeneratorProcessorParameterList) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.collections.TableColumnGeneratorProcessorParameterList
Creates a copy
TableColumnIntegrationParameter - Class in org.hkijena.jipipe.extensions.tables.parameters.enums
Enum-like parameter that allows the selection of a IntegratingColumnOperation.
TableColumnIntegrationParameter() - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnIntegrationParameter
Creates a new instance
TableColumnIntegrationParameter(TableColumnIntegrationParameter) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.enums.TableColumnIntegrationParameter
Creates a copy
TableColumnNormalization - Enum in org.hkijena.jipipe.extensions.tables.datatypes
 
TableColumnReference - Class in org.hkijena.jipipe.extensions.tables
A table column that references a column within a ResultsTableData
TableColumnReference(ResultsTableData, int) - Constructor for class org.hkijena.jipipe.extensions.tables.TableColumnReference
 
TableColumnSourceExpressionParameter - Class in org.hkijena.jipipe.extensions.expressions
Parameter that acts as source (via matching a column) or a generator
TableColumnSourceExpressionParameter() - Constructor for class org.hkijena.jipipe.extensions.expressions.TableColumnSourceExpressionParameter
 
TableColumnSourceExpressionParameter(TableColumnSourceExpressionParameter.TableSourceType, String) - Constructor for class org.hkijena.jipipe.extensions.expressions.TableColumnSourceExpressionParameter
 
TableColumnSourceExpressionParameter(TableColumnSourceExpressionParameter) - Constructor for class org.hkijena.jipipe.extensions.expressions.TableColumnSourceExpressionParameter
 
TableColumnSourceExpressionParameter.TableSourceType - Enum in org.hkijena.jipipe.extensions.expressions
 
TableColumnSourceExpressionParameter.VariablesInfo - Class in org.hkijena.jipipe.extensions.expressions
 
TableColumnToImageAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert
 
TableColumnToImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableColumnToImageAlgorithm
 
TableColumnToImageAlgorithm(TableColumnToImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableColumnToImageAlgorithm
 
TableColumnValuesExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.expressions
 
TableColumnValuesExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.expressions.TableColumnValuesExpressionParameterVariablesInfo
 
TableEditor - Class in org.hkijena.jipipe.ui.tableeditor
Spreadsheet UI
TableEditor(JIPipeWorkbench, ResultsTableData) - Constructor for class org.hkijena.jipipe.ui.tableeditor.TableEditor
 
TableEditor.NumberEditor - Class in org.hkijena.jipipe.ui.tableeditor
 
tableFromOMERO(TableData) - Static method in class org.hkijena.jipipe.extensions.omero.util.OMEROUtils
 
TableNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories
 
TableNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory
 
TablesFromScript - Class in org.hkijena.jipipe.extensions.tables.nodes
Algorithm that annotates all data with the same annotation
TablesFromScript(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.TablesFromScript
 
TablesFromScript(TablesFromScript) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.TablesFromScript
Copies the algorithm
TablesPlugin - Class in org.hkijena.jipipe.extensions.tables
Standard set of table operations
TablesPlugin() - Constructor for class org.hkijena.jipipe.extensions.tables.TablesPlugin
 
TableToCircularROIAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate
Wrapper around RoiManager
TableToCircularROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm
Instantiates a new node type.
TableToCircularROIAlgorithm(TableToCircularROIAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToCircularROIAlgorithm
Creates a copy
TableToCSVTextAlgorithm - Class in org.hkijena.jipipe.extensions.strings.nodes.text
 
TableToCSVTextAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.text.TableToCSVTextAlgorithm
 
TableToCSVTextAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.text.TableToCSVTextAlgorithm
 
TableToHistogramAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.transform
 
TableToHistogramAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
TableToHistogramAlgorithm(TableToHistogramAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.transform.TableToHistogramAlgorithm
 
TableToImageAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert
 
TableToImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableToImageAlgorithm
 
TableToImageAlgorithm(TableToImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.convert.TableToImageAlgorithm
 
tableToOMERO(ResultsTableData) - Static method in class org.hkijena.jipipe.extensions.omero.util.OMEROUtils
 
TableToRectangularROIAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate
Wrapper around RoiManager
TableToRectangularROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
Instantiates a new node type.
TableToRectangularROIAlgorithm(TableToRectangularROIAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm
Creates a copy
TableToRectangularROIAlgorithm.Anchor - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate
Available anchors
TableToRectangularROIAlgorithm.Mode - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate
 
TableUtils - Class in org.hkijena.jipipe.utils
Utilities for TableModel
TableViewerUISettings - Class in org.hkijena.jipipe.extensions.settings
 
TableViewerUISettings() - Constructor for class org.hkijena.jipipe.extensions.settings.TableViewerUISettings
 
TabRenamedEvent(DocumentTabPane, DocumentTabPane.DocumentTab) - Constructor for class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.TabRenamedEvent
 
TabRenamedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.TabRenamedEventEmitter
 
TabSettings() - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.FormData.TabSettings
 
TabSettings(FormData.TabSettings) - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.FormData.TabSettings
 
TAGGED_SKELETONS_IMAGE_OUTPUT_SLOT - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm
 
TangentColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a sine function
TangentColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.TangentColumnOperation
 
Task(String, Ribbon.Band...) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Task
 
Task(String, List<Ribbon.Band>) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Task
 
Task(String, String, Ribbon.Band...) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Task
 
Task(String, String, List<Ribbon.Band>) - Constructor for class org.hkijena.jipipe.ui.components.ribbon.Ribbon.Task
 
TemplateMatchingMethod - Enum in org.hkijena.jipipe.extensions.ijmultitemplatematching
 
TemplateProjectListCellRenderer - Class in org.hkijena.jipipe.ui.components.renderers
Renders a recent project
TemplateProjectListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.components.renderers.TemplateProjectListCellRenderer
 
TemplatesUpdatedEvent(JIPipeProjectTemplateRegistry) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry.TemplatesUpdatedEvent
 
TemplatesUpdatedEventEmitter() - Constructor for class org.hkijena.jipipe.api.registries.JIPipeProjectTemplateRegistry.TemplatesUpdatedEventEmitter
 
TemporaryFileDataSource - Class in org.hkijena.jipipe.extensions.filesystem.datasources
 
TemporaryFileDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.TemporaryFileDataSource
 
TemporaryFileDataSource(TemporaryFileDataSource) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.TemporaryFileDataSource
 
TemporaryFolderDataSource - Class in org.hkijena.jipipe.extensions.filesystem.datasources
 
TemporaryFolderDataSource(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.TemporaryFolderDataSource
 
TemporaryFolderDataSource(TemporaryFolderDataSource) - Constructor for class org.hkijena.jipipe.extensions.filesystem.datasources.TemporaryFolderDataSource
 
test(Collection<JIPipeTextAnnotation>, String, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotationFilterExpression
Evaluates the expression as boolean
test(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
Runs the expression and returns the boolean result.
test(Collection<JIPipeTextAnnotation>, String, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.AnnotationGeneratorExpression
Evaluates the expression as boolean
test(JIPipeDataSlot, int) - Method in class org.hkijena.jipipe.extensions.expressions.DataRowQueryExpression
Returns true if the data contained in this slot matches the expression
test(String, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionEvaluator
Returns the boolean evaluated expression.
test(String, String) - Method in class org.hkijena.jipipe.extensions.expressions.NamedStringQueryExpression
Tests if the key value pair is queried
test(Path) - Method in class org.hkijena.jipipe.extensions.expressions.PathQueryExpression
Returns true if the query matches the string
test(Path, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.PathQueryExpression
Returns true if the query matches the string
test(Map<String, String>) - Method in class org.hkijena.jipipe.extensions.expressions.StringMapQueryExpression
Tests if the query matches the key value pairs
test(Collection<String>) - Method in class org.hkijena.jipipe.extensions.expressions.StringMapQueryExpression
Tests if the query matches the keys=values.
test(String) - Method in class org.hkijena.jipipe.extensions.expressions.StringQueryExpression
Returns true if the query matches the string
test(String, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.StringQueryExpression
Returns true if the query matches the string
test(ResultsTableData, int, int) - Method in class org.hkijena.jipipe.extensions.expressions.TableCellValueQueryExpression
Returns true if the table cell is accepted by the expression
test(Class<?>) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.Image_16_32_Filter
 
test(Class<?>) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.Image_8_16_32_Filter
 
test(Class<?>) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.filters.NonGenericImagePlusDataClassFilter
 
test(String) - Method in class org.hkijena.jipipe.ui.components.search.SearchTextField
 
test(Class<?>) - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotDataClassFilter
 
test(Class<?>) - Method in class org.hkijena.jipipe.utils.classfilters.AnyClassFilter
 
test(Class<?>) - Method in class org.hkijena.jipipe.utils.classfilters.NonGenericClassFilter
 
testAnyOf(Collection<Path>, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.PathQueryExpression
Returns true of one of the strings matches the query.
testAnyOf(Collection<String>) - Method in class org.hkijena.jipipe.extensions.expressions.StringQueryExpression
Returns true of one of the strings matches the query.
testNetworkConnection() - Static method in class org.hkijena.jipipe.utils.NetworkUtils
Taken from ImageJUpdater Check whether we can connect to the Internet.
textAnnotationsToR(StringBuilder, Collection<JIPipeTextAnnotation>) - Static method in class org.hkijena.jipipe.extensions.r.RUtils
Converts annotations into R code.
TextBoxAnnotationGraphNode - Class in org.hkijena.jipipe.extensions.graphannotation.nodes
 
TextBoxAnnotationGraphNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.graphannotation.nodes.TextBoxAnnotationGraphNode
 
TextBoxAnnotationGraphNode(TextBoxAnnotationGraphNode) - Constructor for class org.hkijena.jipipe.extensions.graphannotation.nodes.TextBoxAnnotationGraphNode
 
TextBoxAnnotationGraphNode.ShapeParameters - Class in org.hkijena.jipipe.extensions.graphannotation.nodes
 
TextBoxAnnotationGraphNodeTool - Class in org.hkijena.jipipe.extensions.graphannotation.tools
 
TextBoxAnnotationGraphNodeTool() - Constructor for class org.hkijena.jipipe.extensions.graphannotation.tools.TextBoxAnnotationGraphNodeTool
 
textColor - Variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarConfiguration
 
TextDataToTableAlgorithm - Class in org.hkijena.jipipe.extensions.strings.nodes.text
 
TextDataToTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.text.TextDataToTableAlgorithm
 
TextDataToTableAlgorithm(TextDataToTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.strings.nodes.text.TextDataToTableAlgorithm
 
TextDataToTableAlgorithm.Entry - Class in org.hkijena.jipipe.extensions.strings.nodes.text
 
TextLocationParameters() - Constructor for class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters
 
TextLocationParameters(AbstractTextBoxAnnotationGraphNode.TextLocationParameters) - Constructor for class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextLocationParameters
 
TextRenderParameters() - Constructor for class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters
 
TextRenderParameters(AbstractTextBoxAnnotationGraphNode.TextRenderParameters) - Constructor for class org.hkijena.jipipe.extensions.graphannotation.nodes.AbstractTextBoxAnnotationGraphNode.TextRenderParameters
 
TextSettings() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings
 
TextSettings(DrawScaleBarAlgorithm.TextSettings) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.DrawScaleBarAlgorithm.TextSettings
 
TextSettings() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings
 
TextSettings(DrawScaleBarRoiAlgorithm.TextSettings) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.draw.DrawScaleBarRoiAlgorithm.TextSettings
 
theta - Variable in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines.HoughLine
 
ThresholdByAnnotation2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
Wrapper around ImageProcessor
ThresholdByAnnotation2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ThresholdByAnnotation2DAlgorithm
Instantiates a new node type.
ThresholdByAnnotation2DAlgorithm(ThresholdByAnnotation2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ThresholdByAnnotation2DAlgorithm
Instantiates a new node type.
ThresholdParameters() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters
 
ThresholdParameters(CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters
 
ThresholdParameters() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters
 
ThresholdParameters(CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters
 
ThresholdParameters() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters
 
ThresholdParameters(CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters
 
ThresholdsExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold
 
ThresholdsExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.ThresholdsExpressionParameterVariablesInfo
 
thumbMoved(int, float) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerLUTEditor
 
thumbMoved(int, float) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerOpacityLUTEditor
 
thumbMoved(int, float) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl
 
thumbMoved(int, float) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl
 
thumbMoved(int, float) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI
 
Thumbnail() - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail
 
Thumbnail(String, Dimension, Path, List<Path>) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail
 
Thumbnail(JIPipeDataThumbnailsMetadata.Thumbnail) - Constructor for class org.hkijena.jipipe.api.data.JIPipeDataThumbnailsMetadata.Thumbnail
 
ThumbnailGeneratedEvent(JIPipeDataItemStore) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEvent
 
ThumbnailGeneratedEventEmitter() - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGeneratedEventEmitter
 
ThumbnailGenerationRun(JIPipeThumbnailGenerationQueue, JIPipeDataItemStore, int, int) - Constructor for class org.hkijena.jipipe.api.data.thumbnails.JIPipeThumbnailGenerationQueue.ThumbnailGenerationRun
 
ThumbRenderer() - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.ThumbRenderer
 
ThumbRenderer() - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl.ThumbRenderer
 
ThumbRenderer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI.ThumbRenderer
 
thumbSelected(int) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerLUTEditor
 
thumbSelected(int) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.ImageViewerOpacityLUTEditor
 
thumbSelected(int) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl
 
thumbSelected(int) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl
 
thumbSelected(int) - Method in class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI
 
tighten(PointRange, PointRange) - Static method in class org.hkijena.jipipe.utils.PointRange
Modifies the center points, so they are closer together.
TileImage2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
Deprecated.
TileImage2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
TileImage2DAlgorithm(TileImage2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2DAlgorithm
Deprecated.
 
TileImage2Dv2Algorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
 
TileImage2Dv2Algorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
TileImage2Dv2Algorithm(TileImage2Dv2Algorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TileImage2Dv2Algorithm
 
timeoutOccured(Watchdog) - Method in class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationExecuteWatchdog
 
toAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
Converts the column index to an annotation column index, or returns -1 if the column is not one
toAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableMetadata
Converts the column index to an annotation column index, or returns -1 if the column is not one
toAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantDataTableUI.WrapperColumnHeaderRenderer
Converts the column index to an annotation column index, or returns -1 if the column is not one
toAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantTableModel
Converts the column index to an annotation column index, or returns -1 if the column is not one
toAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableModel
Converts the column index to an annotation column index, or returns -1 if the column is not one
toAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableUI.WrapperColumnHeaderRenderer
Converts the column index to an annotation column index, or returns -1 if the column is not one
toAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
Converts the column index to an annotation column index, or returns -1 if the column is not one
toAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerDataTableUI.WrapperColumnHeaderRenderer
Converts the column index to an annotation column index, or returns -1 if the column is not one
toAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerTableModel
Converts the column index to an annotation column index, or returns -1 if the column is not one
toAnnotationTable(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Converts the slot into an annotation table
toAnnotationTable() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
Converts the data table into an annotation table
toApacheVector3d() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.Point3d
 
toArray() - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
toArray(T[]) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
 
toArray() - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
toArray(T[]) - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
ToBooleanFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.convert
 
ToBooleanFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.convert.ToBooleanFunction
 
toBufferedImage(Image, int) - Static method in class org.hkijena.jipipe.utils.BufferedImageUtils
Converts a given Image into a BufferedImage Applies conversion if the types do not match (useful for greyscale conversion)
toDataAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeDataTableMetadata
Converts the column index to a data annotation column index, or returns -1 if the column is not one
toDataAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.api.data.serialization.JIPipeMergedDataTableMetadata
Converts the column index to a data annotation column index, or returns -1 if the column is not one
toDataAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantDataTableUI.WrapperColumnHeaderRenderer
Converts the column index to a data annotation column index, or returns -1 if the column is not one
toDataAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantTableModel
Converts the column index to a data annotation column index, or returns -1 if the column is not one
toDataAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableModel
Converts the column index to a data annotation column index, or returns -1 if the column is not one
toDataAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableUI.WrapperColumnHeaderRenderer
Converts the column index to a data annotation column index, or returns -1 if the column is not one
toDataAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
Converts the column index to a data annotation column index, or returns -1 if the column is not one
toDataAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerDataTableUI.WrapperColumnHeaderRenderer
Converts the column index to a data annotation column index, or returns -1 if the column is not one
toDataAnnotationColumnIndex(int) - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerTableModel
Converts the column index to a data annotation column index, or returns -1 if the column is not one
ToDataStringAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms
 
ToDataStringAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.ToDataStringAlgorithm
 
ToDataStringAlgorithm(ToDataStringAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.ToDataStringAlgorithm
 
toDetailedString() - Method in interface org.hkijena.jipipe.api.data.JIPipeData
This method returns a detailed string description (with multi-line, etc.) of the data.
toDetailedString() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotDetectorData
 
toDetailedString() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotsCollectionData
 
toDetailedString() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotTrackerData
 
toDetailedString() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
 
toDummySlot(JIPipeDataSlotInfo, JIPipeGraphNode, JIPipeDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
Creates a new dummy slot that contains the data of one input slot and the annotations of this batch
toDummySlot(JIPipeDataSlotInfo, JIPipeGraphNode, JIPipeDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
Creates a new dummy slot that contains the data of one input slot and the annotations of this batch
toFeatureFilter() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeatureFilterParameter
 
toFeatureFilter() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeatureFilterParameter
 
toFont(int, int) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.FontFamilyParameter
 
toFont(FontFamilyParameter, int) - Method in enum org.hkijena.jipipe.extensions.parameters.library.primitives.FontStyleParameter
 
toGeometry(Color, boolean, boolean, Quantity.LengthUnit, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3D
 
toggleSlot(JIPipeDataSlotInfo, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Toggles a slot with given info on/off.
toGreyscale(Color) - Static method in class org.hkijena.jipipe.utils.ColorUtils
 
ToHSBColorSpaceConverterAlgorithm - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color
 
ToHSBColorSpaceConverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color.ToHSBColorSpaceConverterAlgorithm
 
ToHSBColorSpaceConverterAlgorithm(ColorSpaceConverterAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color.ToHSBColorSpaceConverterAlgorithm
 
toHtmlElement(JIPipeDependency) - Static method in interface org.hkijena.jipipe.JIPipeDependency
Exports the dependency to an HTML element (without the root tag)
toImage(int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.LUTData
Renders the LUT into an RGB Image
toImagejAxes(String) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.ImgUtils
Convert string with chars from ImgUtils.DEFAULT_STRING_AXES to axes from ImgUtils.DEFAULT_AXES.
toImagePlus(boolean, int) - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
toIndexedMeshGeometry(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DUnindexedMeshGeometry
Converts this unindexed mesh geometry into an optimized, indexed mesh geometry
toInputSlotAnnotation() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
Converts this info into the annotation form.
ToIntegerFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.convert
 
ToIntegerFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.convert.ToIntegerFunction
 
toJson(JsonGenerator) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
toJson(JsonGenerator) - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration
Saves this configuration to JSON.
toJson(JsonGenerator) - Method in class org.hkijena.jipipe.api.JIPipeProject
Writes the project to JSON
toJson(JsonGenerator) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Saves this algorithm to JSON.
toJson() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotDetectorData
 
toJson() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotTrackerData
 
ToJsonFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.convert
 
ToJsonFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.convert.ToJsonFunction
 
toJsonString(Object) - Static method in class org.hkijena.jipipe.utils.json.JsonUtils
 
tokenize(String, boolean, boolean) - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
tokenize(String) - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
tokens - Variable in class org.hkijena.jipipe.api.nodes.database.WeightedTokens
 
ToLABColorSpaceConverterAlgorithm - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color
 
ToLABColorSpaceConverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color.ToLABColorSpaceConverterAlgorithm
 
ToLABColorSpaceConverterAlgorithm(ColorSpaceConverterAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color.ToLABColorSpaceConverterAlgorithm
 
toLabels(ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
toLabels(ImagePlus, boolean, boolean, int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
toList() - Method in class org.hkijena.jipipe.api.runtimepartitioning.JIPipeRuntimePartitionConfiguration
 
toLoginCredentials() - Method in class org.hkijena.jipipe.extensions.omero.OMEROCredentialsEnvironment
Converts the credentials into a SciJava OMERO location
toLUT() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.LUTData
Converts the LUT into an ImageJ LUT
toLUT() - Method in enum org.hkijena.jipipe.extensions.parameters.library.colors.ColorMap
Converts the color map into an ImageJ LUT
toMarkdown() - Method in class org.hkijena.jipipe.extensions.parameters.library.markup.HTMLText
 
toMask(ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
toMask(ImagePlus, boolean, boolean, int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
toMask(Margin, boolean, boolean, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Generates a mask image from pure ROI data.
toMask(int, int, boolean, boolean, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Generates a mask image from pure ROI data.
toMask(ImagePlus, boolean, boolean, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Converts this ROI list into a mask that has the same size as the reference image
toMask(boolean, boolean, int, int, int, int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Converts this ROI list into a mask that has the same size as the reference image
toMeshGeometry(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DIndexedMeshGeometry
 
toMeshGeometry(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DLineGeometry
 
toMeshGeometry(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DSphereGeometry
 
toMeshGeometry(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DUnindexedMeshGeometry
 
toMeshGeometry(JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.extensions.scene3d.model.Scene3DGeometry
Returns a mesh equivalent of this geometry
toNormalizedVector3d() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.Point3d
 
ToNumber2Function - Class in org.hkijena.jipipe.extensions.expressions.functions.convert
 
ToNumber2Function() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.convert.ToNumber2Function
 
ToNumberFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.convert
 
ToNumberFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.convert.ToNumberFunction
 
ToNumericColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Sorts the items ascending
ToNumericColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.ToNumericColumnOperation
 
toolAllowLeftMouseDrag() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MouseMaskDrawer2DTool
 
toolAllowLeftMouseDrag() - Method in interface org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2DTool
Returns true if left mouse dragging should be allowed
ToolChangedEvent(ImageViewerPanelCanvas2D, ImageViewerPanelCanvas2DTool, ImageViewerPanelCanvas2DTool) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.ToolChangedEvent
 
ToolChangedEventEmitter() - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2D.ToolChangedEventEmitter
 
toolIsActive() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawer2DTool
 
toolIsActive(ImageViewerPanelCanvas2D) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MouseMaskDrawer2DTool
 
toolIsActive(ImageViewerPanelCanvas2D) - Method in interface org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewerPanelCanvas2DTool
Returns true if the tool is active
ToolsPlugin - Class in org.hkijena.jipipe.extensions.tools
Extension containing some additional tools
ToolsPlugin() - Constructor for class org.hkijena.jipipe.extensions.tools.ToolsPlugin
 
TooltipUtils - Class in org.hkijena.jipipe.utils
Utilities that generate tooltips or other text from JIPipe data data structures
toOutputSlotAnnotation() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
Converts this info into the annotation form.
TOP_BOTTOM - Static variable in class org.hkijena.jipipe.utils.AutoResizeSplitPane
 
toParameterAccess() - Method in class org.hkijena.jipipe.ui.parameters.DynamicParameterEditorDialog.ParameterEntry
 
toParameterString(Object...) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts a list of parameters into a space-delimited
toPath() - Method in class org.hkijena.jipipe.extensions.filesystem.dataypes.PathData
 
toPopulation() - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
toPopulation(int, int) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
toPrettyJsonString(Object) - Static method in class org.hkijena.jipipe.utils.json.JsonUtils
 
toPython() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Converts this table into its equivalent Python form (as dictionary of columns)
toReport() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry
 
ToRGBColorSpaceConverterAlgorithm - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color
 
ToRGBColorSpaceConverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color.ToRGBColorSpaceConverterAlgorithm
 
ToRGBColorSpaceConverterAlgorithm(ColorSpaceConverterAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color.ToRGBColorSpaceConverterAlgorithm
 
toRGBImage(Margin, ROIElementDrawingMode, ROIElementDrawingMode, int, Color, Color) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Generates an RGB image from pure ROI data.
toRoi(boolean, boolean, boolean, int, int) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
toRoi2D(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
toRoi3D(boolean, boolean, int, int, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
toScene3D(boolean, boolean, boolean, Quantity.LengthUnit, boolean, float, float, Color, Color, String) - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
toSciJavaVector3d() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.Point3d
 
toString() - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataAnnotation
 
toString() - Method in enum org.hkijena.jipipe.api.annotation.JIPipeDataAnnotationMergeMode
 
toString() - Method in class org.hkijena.jipipe.api.annotation.JIPipeTextAnnotation
 
toString() - Method in enum org.hkijena.jipipe.api.annotation.JIPipeTextAnnotationMergeMode
 
toString() - Method in class org.hkijena.jipipe.api.cache.JIPipeLocalProjectMemoryCache
 
toString() - Method in class org.hkijena.jipipe.api.compat.ImageJExportParameters
 
toString() - Method in class org.hkijena.jipipe.api.compat.ImageJImportParameters
 
toString() - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
 
toString() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
 
toString() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
 
toString() - Method in class org.hkijena.jipipe.api.data.JIPipeEmptyData
 
toString() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemReadDataStorage
 
toString() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage
 
toString() - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPWriteDataStorage
 
toString() - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstallerPackage
 
toString() - Method in enum org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm.IterationMode
 
toString() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata.List
 
toString() - Method in class org.hkijena.jipipe.api.JIPipeAuthorMetadata
 
toString() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep
 
toString() - Method in class org.hkijena.jipipe.api.nodes.iterationstep.JIPipeSingleIterationStep
 
toString() - Method in enum org.hkijena.jipipe.api.nodes.JIPipeColumMatching
 
toString() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
 
toString() - Method in enum org.hkijena.jipipe.api.nodes.JIPipeTextAnnotationMatchingMethod
 
toString() - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
toString() - Method in class org.hkijena.jipipe.api.registries.JIPipeJavaNodeRegistrationTask
 
toString() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph
 
toString() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunGCGraph
 
toString() - Method in class org.hkijena.jipipe.api.run.JIPipeGraphRunPartitionGraph
 
toString() - Method in enum org.hkijena.jipipe.api.run.JIPipeGraphRunPartitionInheritedBoolean
 
toString() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportEntry
 
toString() - Method in class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeModelData
 
toString() - Method in class org.hkijena.jipipe.extensions.cellpose.datatypes.CellposeSizeModelData
 
toString() - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageData
 
toString() - Method in class org.hkijena.jipipe.extensions.expressions.AbstractExpressionParameter
 
toString() - Method in enum org.hkijena.jipipe.extensions.expressions.TableColumnSourceExpressionParameter.TableSourceType
 
toString() - Method in enum org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderParameterUI.Mode
 
toString() - Method in class org.hkijena.jipipe.extensions.filesystem.dataypes.PathData
 
toString() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.BooleanFormData
 
toString() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.DoubleFormData
 
toString() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.EnumFormData
 
toString() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.IntegerFormData
 
toString() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.ParameterFormData
 
toString() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
toString() - Method in class org.hkijena.jipipe.extensions.forms.datatypes.StringFormData
 
toString() - Method in class org.hkijena.jipipe.extensions.ij3d.datatypes.ROI3DListData
 
toString() - Method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurement
 
toString() - Method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DOutline
 
toString() - Method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurement
 
toString() - Method in class org.hkijena.jipipe.extensions.ijfilaments.datatypes.Filaments3DData
 
toString() - Method in class org.hkijena.jipipe.extensions.ijfilaments.util.Point3d
 
toString() - Method in enum org.hkijena.jipipe.extensions.ijmultitemplatematching.TemplateMatchingMethod
 
toString() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotDetectorData
 
toString() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotsCollectionData
 
toString() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.SpotTrackerData
 
toString() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
 
toString() - Method in enum org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer.StrokeColorMode
 
toString() - Method in class org.hkijena.jipipe.extensions.ijweka.datatypes.WekaModelData
 
toString() - Method in enum org.hkijena.jipipe.extensions.ijweka.parameters.features.WekaFeature2D
 
toString() - Method in enum org.hkijena.jipipe.extensions.ijweka.parameters.features.WekaFeature3D
 
toString() - Method in class org.hkijena.jipipe.extensions.ilastik.datatypes.IlastikModelData
 
toString() - Method in enum org.hkijena.jipipe.extensions.ilastik.parameters.IlastikProjectValidationMode
 
toString() - Method in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetDescription
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.ImageJ2DatasetData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.BorderImageJ2OutOfBoundsFactoryData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.ByteConstantValueImageJ2OutOfBoundsFactoryData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.DoubleConstantValueImageJ2OutOfBoundsFactoryData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.FloatConstantValueImageJ2OutOfBoundsFactoryData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.IntegerConstantValueImageJ2OutOfBoundsFactoryData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.LongConstantValueImageJ2OutOfBoundsFactoryData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.constant.ShortConstantValueImageJ2OutOfBoundsFactoryData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.EmptyImageJ2OutOfBoundsFactory
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.MirrorImageJ2OutOfBoundsFactoryData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.outofbounds.PeriodicImageJ2OutOfBoundsFactoryData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.CenteredRectangleImageJ2ShapeData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.DiamondImageJ2ShapeData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.DiamondTipsImageJ2ShapeData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.EmptyImageJ2ShapeData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HorizontalLineImageJ2ShapeData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.HyperSphereImageJ2ShapeData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.PairOfPointsImageJ2ShapeData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.PeriodicLineImageJ2ShapeData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.shapes.RectangleImageJ2ShapeData
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.CycleRemovalMethod
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.EndRemovalMethod
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarPosition
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm.Method
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm.Mode
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm.Method
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DAlgorithm.Operand
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm.Operand
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm.Operation
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm.Attribute
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm.Operation
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm.Operation
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm.Mode
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm.Anchor
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurement
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm.SliceThresholdMode
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.ImageROITargetArea
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.Neighborhood2D
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.Neighborhood2D3D
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.Neighborhood3D
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OverlapStatistics
 
toString() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.GreyscaleColorSpace
 
toString() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.HSBColorSpace
 
toString() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.IgnoreColorSpace
 
toString() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.LABColorSpace
 
toString() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.colorspace.RGBColorSpace
 
toString() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.OMEImageData
 
toString() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.BitDepth
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.HyperstackDimension
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageBlendMode
 
toString() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.RoiRelationMeasurement
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.OptionalBitDepth
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIElementDrawingMode
 
toString() - Method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiOutline
 
toString() - Method in enum org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.Image3DRenderType
 
toString() - Method in class org.hkijena.jipipe.extensions.imp.datatypes.ImpImageData
 
toString() - Method in class org.hkijena.jipipe.extensions.multiparameters.datatypes.ParametersData
 
toString() - Method in class org.hkijena.jipipe.extensions.nodetemplate.templatedownloader.NodeTemplateDownloaderPackage
 
toString() - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROAnnotationReferenceData
 
toString() - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMERODatasetReferenceData
 
toString() - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROGroupReferenceData
 
toString() - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROImageReferenceData
 
toString() - Method in class org.hkijena.jipipe.extensions.omero.datatypes.OMEROProjectReferenceData
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.api.functions.FunctionParameter
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.api.matrix.Matrix2D
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.api.optional.OptionalParameter
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.api.pairs.PairParameter
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.library.markup.HTMLText
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtraction
 
toString() - Method in enum org.hkijena.jipipe.extensions.parameters.library.primitives.FontStyleParameter
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRange
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.IconRef
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExporterRef
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataExportOperationRef
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImporterRef
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.ImageJDataImportOperationRef
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeDataInfoRef
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeNodeInfoRef
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.library.references.JIPipeParameterTypeInfoRef
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.InnerMargin
 
toString() - Method in class org.hkijena.jipipe.extensions.parameters.library.roi.Margin
 
toString() - Method in enum org.hkijena.jipipe.extensions.parameters.library.util.LogicalOperation
 
toString() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
 
toString() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotDataSeries
 
toString() - Method in class org.hkijena.jipipe.extensions.processes.ProcessEnvironment
 
toString() - Method in class org.hkijena.jipipe.extensions.python.PythonEnvironment
 
toString() - Method in enum org.hkijena.jipipe.extensions.python.PythonEnvironmentType
 
toString() - Method in class org.hkijena.jipipe.extensions.python.PythonUtils.RawPythonCode
 
toString() - Method in enum org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm.Dataset
 
toString() - Method in class org.hkijena.jipipe.extensions.scene3d.datatypes.Scene3DData
 
toString() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DIndexedMeshGeometry
 
toString() - Method in class org.hkijena.jipipe.extensions.scene3d.model.geometries.Scene3DUnindexedMeshGeometry
 
toString() - Method in class org.hkijena.jipipe.extensions.strings.StringData
 
toString() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.AnnotationTableData
 
toString() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
toString() - Method in enum org.hkijena.jipipe.extensions.tables.datatypes.TableColumnNormalization
 
toString() - Method in class org.hkijena.jipipe.ui.grapheditor.general.layout.MSTGraphAutoLayoutMethod.Edge
 
toString() - Method in class org.hkijena.jipipe.ui.grapheditor.general.layout.MSTGraphAutoLayoutMethod.Node
 
toString() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeNodeUISlotActiveArea
 
toString() - Method in enum org.hkijena.jipipe.ui.grapheditor.JIPipeGraphViewMode
 
toString() - Method in class org.hkijena.jipipe.ui.project.templatedownloader.ProjectTemplateDownloaderPackage
 
toString() - Method in enum org.hkijena.jipipe.ui.theme.JIPipeUITheme
 
toString() - Method in enum org.hkijena.jipipe.utils.ImageJCalibrationMode
 
toString() - Method in enum org.hkijena.jipipe.utils.PathType
 
toString() - Method in class org.hkijena.jipipe.utils.scripting.MacroFlag
 
toString() - Method in class org.hkijena.jipipe.utils.scripting.MacroSetting
 
toStringAxes(List<AxisType>) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.ImgUtils
Convert axes from ImgUtils.DEFAULT_AXES to string with chars from ImgUtils.DEFAULT_STRING_AXES.
ToStringColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Sorts the items ascending
ToStringColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.ToStringColumnOperation
 
ToStringFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.convert
 
ToStringFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.convert.ToStringFunction
 
toUpdateSite() - Method in class org.hkijena.jipipe.JIPipeImageJUpdateSiteDependency
 
toValue(String, Object) - Method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
toWeakCopy() - Method in class org.hkijena.jipipe.api.data.JIPipeDataTable
Creates a copy of this data table that contains only JIPipeWeakDataReferenceData data and data annotations (If any data is already weak, it is left as-is)
TrackCollectionData - Class in org.hkijena.jipipe.extensions.ijtrackmate.datatypes
 
TrackCollectionData(Model, Settings, ImagePlus) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
 
TrackCollectionData(ModelData) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
 
TrackDrawer - Class in org.hkijena.jipipe.extensions.ijtrackmate.utils
 
TrackDrawer() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
TrackDrawer(TrackDrawer) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer
 
TrackDrawer.StrokeColorMode - Enum in org.hkijena.jipipe.extensions.ijtrackmate.utils
 
TrackFeature - Class in org.hkijena.jipipe.extensions.ijtrackmate.parameters
 
TrackFeature() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeature
 
TrackFeature(TrackFeature) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeature
 
TrackFeature(String) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeature
 
TrackFeature.Deserializer - Class in org.hkijena.jipipe.extensions.ijtrackmate.parameters
 
TrackFeatureFilterParameter - Class in org.hkijena.jipipe.extensions.ijtrackmate.parameters
 
TrackFeatureFilterParameter() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeatureFilterParameter
 
TrackFeatureFilterParameter(TrackFeature, double, boolean) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeatureFilterParameter
 
TrackFeatureFilterParameter(TrackFeatureFilterParameter) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeatureFilterParameter
 
TrackFeatureFilterParameter.List - Class in org.hkijena.jipipe.extensions.ijtrackmate.parameters
 
TrackFeatureVariablesInfo - Class in org.hkijena.jipipe.extensions.ijtrackmate.utils
 
TrackFeatureVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackFeatureVariablesInfo
 
TrackFilterNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks
 
TrackFilterNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TrackFilterNode
 
TrackFilterNode(TrackFilterNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TrackFilterNode
 
TrackingNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks
 
TrackingNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TrackingNode
 
TrackingNode(TrackingNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TrackingNode
 
trackKeyToVariable(String) - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackSpotFeatureVariablesInfo
 
TrackListCellRenderer - Class in org.hkijena.jipipe.extensions.ijtrackmate.display.tracks
 
TrackListCellRenderer(TracksManagerPlugin2D) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TrackListCellRenderer
 
TrackMatePlugin - Class in org.hkijena.jipipe.extensions.ijtrackmate
 
TrackMatePlugin() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.TrackMatePlugin
 
TrackMateUtils - Class in org.hkijena.jipipe.extensions.ijtrackmate.utils
 
TrackMateUtils() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackMateUtils
 
TrackRenderer(ImageViewer2DDisplayRangeControl) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.TrackRenderer
 
TrackRenderer(ImageViewer3DDisplayRangeControl) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl.TrackRenderer
 
TrackRenderer() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI.TrackRenderer
 
TrackSchemeCachedDataViewerWindow - Class in org.hkijena.jipipe.extensions.ijtrackmate.display.trackscheme
 
TrackSchemeCachedDataViewerWindow(JIPipeWorkbench, JIPipeDataTableDataSource, String) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.display.trackscheme.TrackSchemeCachedDataViewerWindow
 
TrackSchemeDataDisplayOperation - Class in org.hkijena.jipipe.extensions.ijtrackmate.display.trackscheme
 
TrackSchemeDataDisplayOperation() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.display.trackscheme.TrackSchemeDataDisplayOperation
 
TrackSchemeRendererNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks
 
TrackSchemeRendererNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TrackSchemeRendererNode
 
TrackSchemeRendererNode(TrackSchemeRendererNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TrackSchemeRendererNode
 
TracksManagerPlugin2D - Class in org.hkijena.jipipe.extensions.ijtrackmate.display.tracks
 
TracksManagerPlugin2D(JIPipeImageViewer) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TracksManagerPlugin2D
 
TracksManagerPlugin2D.SelectionContextPanel - Class in org.hkijena.jipipe.extensions.ijtrackmate.display.tracks
 
TracksManagerPlugin2D.SelectionInfoContextPanel - Class in org.hkijena.jipipe.extensions.ijtrackmate.display.tracks
 
TrackSpotFeatureVariablesInfo - Class in org.hkijena.jipipe.extensions.ijtrackmate.utils
 
TrackSpotFeatureVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackSpotFeatureVariablesInfo
 
TracksToRGBNode - Class in org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks
 
TracksToRGBNode(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TracksToRGBNode
 
TracksToRGBNode(TracksToRGBNode) - Constructor for class org.hkijena.jipipe.extensions.ijtrackmate.nodes.tracks.TracksToRGBNode
 
trackToROIList(int) - Method in class org.hkijena.jipipe.extensions.ijtrackmate.datatypes.TrackCollectionData
 
trackVariableToKey(String) - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackSpotFeatureVariablesInfo
 
transferFromJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.DataSlotModuleInput
 
transferFromJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.DataSlotModuleOutput
 
transferFromJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ModuleItem, Module, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.extensions.imagej2.io.ImageJ2ModuleIO
Transfers data from JIPipe into the module
transferFromJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.ParameterImageJ2ModuleInput
 
transferFromJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput
 
transferFromJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.io.ServiceImageJ2ModuleIO
 
transferToJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ParametersData, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.input.DataSlotModuleInput
 
transferToJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ParametersData, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.io.data.output.DataSlotModuleOutput
 
transferToJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ParametersData, ModuleItem, Module, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.extensions.imagej2.io.ImageJ2ModuleIO
Transfers data from JIPipe from the module
transferToJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ParametersData, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.input.ParameterImageJ2ModuleInput
 
transferToJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ParametersData, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.io.parameters.output.ParameterImageJ2ModuleOutput
 
transferToJIPipe(ImageJ2OpNode, JIPipeSingleIterationStep, ParametersData, ModuleItem, Module, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagej2.io.ServiceImageJ2ModuleIO
 
TransformArrayFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.statistics
 
TransformArrayFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.statistics.TransformArrayFunction
 
transformationFinished(View) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
transformationStarted(View) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
transformationUpdated(View) - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
TransformCrop2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
Wrapper around ImageProcessor
TransformCrop2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm
Instantiates a new node type.
TransformCrop2DAlgorithm(TransformCrop2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformCrop2DAlgorithm
Instantiates a new node type.
transformDims(Img<T>, List<AxisType>) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.ImgUtils
transformDims(Img<T>, List<AxisType>, List<AxisType>) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.ImgUtils
Change dimensions of the image with the given source axes to match destination axes.
TransformEqualCanvasSize2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
 
TransformEqualCanvasSize2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm
 
TransformEqualCanvasSize2DAlgorithm(TransformEqualCanvasSize2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualCanvasSize2DAlgorithm
 
TransformEqualizeDimensionsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
 
TransformEqualizeDimensionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm
 
TransformEqualizeDimensionsAlgorithm(TransformEqualizeDimensionsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformEqualizeDimensionsAlgorithm
 
TransformExpandCanvas2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
 
TransformExpandCanvas2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm
 
TransformExpandCanvas2DAlgorithm(TransformExpandCanvas2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformExpandCanvas2DAlgorithm
 
TransformFlip2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
Wrapper around ImageProcessor
TransformFlip2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformFlip2DAlgorithm
Instantiates a new node type.
TransformFlip2DAlgorithm(TransformFlip2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformFlip2DAlgorithm
Instantiates a new node type.
TransformFlip2DAlgorithm.FlipMode - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
Available ways to flip an image
TransformRotate2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
Wrapper around ImageProcessor
TransformRotate2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm
Instantiates a new node type.
TransformRotate2DAlgorithm(TransformRotate2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm
Instantiates a new node type.
TransformRotate2DAlgorithm.RotationMode - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
Available ways to flip an image
TransformRotateFree2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
Wrapper around ImageProcessor
TransformRotateFree2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm
Instantiates a new node type.
TransformRotateFree2DAlgorithm(TransformRotateFree2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotateFree2DAlgorithm
 
TransformScale2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
Wrapper around ImageProcessor
TransformScale2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
Instantiates a new node type.
TransformScale2DAlgorithm(TransformScale2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale2DAlgorithm
Instantiates a new node type.
TransformScale3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
Wrapper around ImageProcessor
TransformScale3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm
Instantiates a new node type.
TransformScale3DAlgorithm(TransformScale3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformScale3DAlgorithm
Instantiates a new node type.
TransformSetHyperstackDimensionsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
 
TransformSetHyperstackDimensionsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm
 
TransformSetHyperstackDimensionsAlgorithm(TransformSetHyperstackDimensionsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformSetHyperstackDimensionsAlgorithm
 
translate(Vector3d) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Translates the view by the specified distances along the x, y and z direction (of the vworld).
translate(MouseEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
This method should be called during the mouse is dragged, if the mouse event should result in a translation.
translateXY(int, int) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Translates the view suitable to a mouse movement by dxPix and dyPix on the canvas.
translateXY(double, double) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Translates the view by the specified distances along the x and y direction (of the image plate).
TRANSPARENT - Static variable in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
 
TRANSPARENT - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
TRANSPARENT_BACKGROUND - Static variable in class org.hkijena.jipipe.ui.components.FormPanel
Flag that makes the backgrounds of the components transparent (non-opaque) if possible
traverse() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Traverses the graph in topological order.
traverse() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportContext
 
traverseNavigable() - Method in class org.hkijena.jipipe.api.validation.JIPipeValidationReportContext
 
traverseSlots() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Traverses the graph in topological order.
TriConsumer<T,U,V> - Interface in org.hkijena.jipipe.utils
 
TriggerBackupAllTool - Class in org.hkijena.jipipe.extensions.dev
 
TriggerBackupAllTool(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.dev.TriggerBackupAllTool
Creates a new instance
triggerChangedEvent() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup
 
triggerRefreshedEvent() - Static method in class org.hkijena.jipipe.extensions.settings.NodeTemplateSettings
 
triggerSlotConfigurationChangedEvent() - Method in interface org.hkijena.jipipe.api.data.JIPipeSlotConfiguration
 
tryAutoRun(boolean, QuickRunSettings, Consumer<QuickRun>) - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.properties.QuickRunSetupUI
Attempts to setup and run the quick run automatically and run a function when finished
tryDequeue() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
Attempts to run a scheduled run
tryFindWorkbench(JIPipeGraph, JIPipeWorkbench) - Static method in interface org.hkijena.jipipe.ui.JIPipeWorkbench
Attempts to find a workbench
tryGetIntegers(int, int, JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRange
Generates the list of integers based on the value.
tryGetWebClientURL(String, String, long) - Static method in class org.hkijena.jipipe.extensions.omero.util.OMEROUtils
 
tryParseDouble(String, double) - Static method in class org.hkijena.jipipe.utils.StringUtils
 
tryParseDoubleOrReturnString(String) - Static method in class org.hkijena.jipipe.utils.StringUtils
Attempts to parse a string as double.
tryResolveToKnownDependencies(Set<JIPipeDependency>) - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
Resolves as many dependencies in the provided set against a known dependency, so there is access to other metadata.
trySetInputSlotOrder(List<String>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Sets the input slot order.
trySetOutputSlotOrder(List<String>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Sets the output slot order.
type - Variable in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetDescription
Type of the dataset.

U

UI_PADDING - Static variable in class org.hkijena.jipipe.utils.UIUtils
 
uiImportParameterFromGraph(JIPipeWorkbench) - Method in class org.hkijena.jipipe.extensions.multiparameters.nodes.GeneratedParameters
 
UIPlotDataSeriesColumnEnum - Class in org.hkijena.jipipe.extensions.plots.parameters
Parameter that contains one selected PlotDataSeries item.
UIPlotDataSeriesColumnEnum() - Constructor for class org.hkijena.jipipe.extensions.plots.parameters.UIPlotDataSeriesColumnEnum
 
UIPlotDataSeriesColumnEnumParameterEditorUI - Class in org.hkijena.jipipe.extensions.plots.parameters
Works for TableColumn.
UIPlotDataSeriesColumnEnumParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.plots.parameters.UIPlotDataSeriesColumnEnumParameterEditorUI
 
UIUtils - Class in org.hkijena.jipipe.utils
Utils for UI
UIUtils() - Constructor for class org.hkijena.jipipe.utils.UIUtils
 
UIUtils.DragThroughMouseListener - Class in org.hkijena.jipipe.utils
 
UltimateErodedPoints2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary
Wrapper around EDM
UltimateErodedPoints2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.UltimateErodedPoints2DAlgorithm
Instantiates a new node type.
UltimateErodedPoints2DAlgorithm(UltimateErodedPoints2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.UltimateErodedPoints2DAlgorithm
Instantiates a new node type.
UnclosableInputStream - Class in org.hkijena.jipipe.utils
Wrapper around an OutputStream that prevents closing
UnclosableInputStream(InputStream) - Constructor for class org.hkijena.jipipe.utils.UnclosableInputStream
 
UnclosableOutputStream - Class in org.hkijena.jipipe.utils
Wrapper around an OutputStream that prevents closing
UnclosableOutputStream(OutputStream) - Constructor for class org.hkijena.jipipe.utils.UnclosableOutputStream
 
UndefinedExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.expressions.variables
Used to indicate that the list of variables are not known
UndefinedExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.expressions.variables.UndefinedExpressionParameterVariablesInfo
 
undo(UUID) - Method in interface org.hkijena.jipipe.api.history.JIPipeHistoryJournal
Undo the last undo operation
unescapeString(String) - Static method in class org.hkijena.jipipe.extensions.expressions.JIPipeExpressionEvaluator
 
uninstall() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCachedDataDisplayCacheControl
 
UNIT_NO_UNIT - Static variable in class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 
UNIT_PIXELS - Static variable in class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 
unitIsPixels() - Method in class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
 
UNITS_FACTORS - Static variable in class org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity
Contains factors to the standard unit Length: m Weight: g Time: s
universe - Variable in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
 
universeClosed() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
UniverseInitializerRun(ImageViewerPanel3D) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D.UniverseInitializerRun
 
unload() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
UnlockNodeLocationSizeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
UnlockNodeLocationSizeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UnlockNodeLocationSizeUIContextAction
 
UnMeltTableAlgorithm - Class in org.hkijena.jipipe.extensions.tables.nodes.transform
 
UnMeltTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.transform.UnMeltTableAlgorithm
Creates a new instance
UnMeltTableAlgorithm(UnMeltTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.transform.UnMeltTableAlgorithm
Creates a copy
unpackToNodeGroup(JsonAlgorithm) - Static method in class org.hkijena.jipipe.api.grouping.JsonAlgorithm
Replaces the targeted algorithm by a NodeGroup
UnreferencedRoiToMaskAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert
Wrapper around RoiManager
UnreferencedRoiToMaskAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm
Instantiates a new node type.
UnreferencedRoiToMaskAlgorithm(UnreferencedRoiToMaskAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToMaskAlgorithm
Instantiates a new node type.
UnreferencedRoiToRGBAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert
Wrapper around RoiManager
UnreferencedRoiToRGBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
Instantiates a new node type.
UnreferencedRoiToRGBAlgorithm(UnreferencedRoiToRGBAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.UnreferencedRoiToRGBAlgorithm
Instantiates a new node type.
unregister(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeNodeRegistry
Removes a node from the registry
UnsetRoiImageAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi
Wrapper around RoiManager
UnsetRoiImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.UnsetRoiImageAlgorithm
Instantiates a new node type.
UnsetRoiImageAlgorithm(UnsetRoiImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.UnsetRoiImageAlgorithm
Instantiates a new node type.
UnspecifiedValidationReportContext - Class in org.hkijena.jipipe.api.validation.contexts
 
UnspecifiedValidationReportContext() - Constructor for class org.hkijena.jipipe.api.validation.contexts.UnspecifiedValidationReportContext
 
unsubscribe(Listener) - Method in class org.hkijena.jipipe.api.events.JIPipeEventEmitter
 
UnTileImage2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
 
UnTileImage2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm
 
UnTileImage2DAlgorithm(UnTileImage2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.UnTileImage2DAlgorithm
 
unwrap(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
update(IObservable, ImportEvent) - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROUploadToJIPipeLogger
 
update(Graphics, JComponent) - Method in class org.hkijena.jipipe.ui.components.RoundedButtonUI
 
update(Graphics, JComponent) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
updateActiveAreas() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeAnnotationGraphNodeUI
 
updateActiveAreas() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
updateAnalyzer() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.ImageStatisticsSetParameter
Sends the settings to Analyzer
updateAnnotationNodeLayers() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
updateAssets() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
UpdateCacheAction - Class in org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.actions
 
UpdateCacheAction(boolean, boolean) - Constructor for class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.actions.UpdateCacheAction
 
UpdateCacheNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
UpdateCacheNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheNodeUIContextAction
 
UpdateCacheOnlyPredecessorsNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
UpdateCacheOnlyPredecessorsNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheOnlyPredecessorsNodeUIContextAction
 
UpdateCacheShowIntermediateNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.general.contextmenu
 
UpdateCacheShowIntermediateNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.general.contextmenu.UpdateCacheShowIntermediateNodeUIContextAction
 
updateChartProperties(JFreeChart) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
Sets properties of charts
updateColorMaps() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.spots.SpotListCellRenderer
 
updateColorMaps() - Method in class org.hkijena.jipipe.extensions.ijtrackmate.display.tracks.TrackListCellRenderer
 
updateColors() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
updateConflictList() - Method in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
updateConflictList() - Method in class org.hkijena.jipipe.ui.ijupdater.ResolveDependencies
 
updateConflictsMessage() - Method in class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager
 
updateConflictsMessage() - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeImageJPluginManager
 
updateContents() - Method in class org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.DocumentTabComponent
 
UpdatedEvent(JIPipeNotificationInbox) - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.UpdatedEvent
 
UpdatedEventEmitter() - Constructor for class org.hkijena.jipipe.api.notifications.JIPipeNotificationInbox.UpdatedEventEmitter
 
updateFromCurrentImage(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl
 
updateFromCurrentSlice(boolean) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl
 
updateFrontBackClip() - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
 
updateGraphNodeSlots() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Synchronizes the slots with the slot definition
updateGroupSlots() - Method in class org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm
Updates the slots from the wrapped graph
updateHotkeyInfo() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
updateLabel() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.OrthoSliderPanel
 
updateLabelSizing(int) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins3d.SlicerControlsPlugin3D.OrthoSliderPanel
 
updateListModel() - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
updateListModel(Collection<ROI3D>) - Method in class org.hkijena.jipipe.extensions.ij3d.imageviewer.ROIManagerPlugin3D
 
updateListModel() - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
updateListModel(Collection<Filaments3DData>) - Method in class org.hkijena.jipipe.extensions.ijfilaments.display.FilamentsManagerPlugin3D
 
updateListModel() - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
updateListModel(boolean, Collection<Roi>) - Method in class org.hkijena.jipipe.extensions.imageviewer.plugins2d.roimanager.ROIManagerPlugin2D
 
updateLutAndCalibrationNow() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D
 
UpdateLutAndCalibrationRun(JIPipeImageViewer, List<Content>) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D.UpdateLutAndCalibrationRun
 
updateMappings() - Method in class org.hkijena.jipipe.ui.ijupdater.FileTableModel
 
updateNotifications() - Method in class org.hkijena.jipipe.ui.notifications.GenericNotificationInboxUI
 
updateNotifications() - Method in class org.hkijena.jipipe.ui.notifications.WorkbenchNotificationInboxUI
 
updateParameterHelpDrillDown() - Method in class org.hkijena.jipipe.ui.components.FormPanel
 
updatePredecessorCache() - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantUI
 
updateRegistrationTasks() - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionLoaderPlugin
Tries to register more extensions waiting for dependencies
updateRenderedPreviews() - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantTableModel
 
updateRenderedPreviews() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableModel
 
updateRenderedPreviews() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeExtendedMultiDataTableModel
 
updateRenderedPreviews() - Method in class org.hkijena.jipipe.ui.datatable.JIPipeSimpleDataBatchTableModel
 
updateRenderedPreviews() - Method in class org.hkijena.jipipe.ui.datatracer.DataTracerTableModel
 
updateRenderedPreviews() - Method in class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeRowDataAnnotationMergedTableCellRenderer
 
updateRenderedPreviews() - Method in class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeRowDataAnnotationTableCellRenderer
 
updateRenderedPreviews() - Method in class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeRowDataMergedTableCellRenderer
 
updateRenderedPreviews() - Method in class org.hkijena.jipipe.ui.resultanalysis.renderers.JIPipeRowDataTableCellRenderer
 
updateROIOrMaskSlot(ImageROITargetArea, JIPipeSlotConfiguration) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.ImageJAlgorithmUtils
 
updateSelection() - Method in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
updateSelection() - Method in class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExporter
 
updateSelection() - Method in class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExtensionGraphUI
 
updateSelection() - Method in class org.hkijena.jipipe.ui.grapheditor.algorithmpipeline.JIPipePipelineGraphEditorUI
 
updateSelection() - Method in class org.hkijena.jipipe.ui.grapheditor.compartments.JIPipeCompartmentsGraphEditorUI
 
updateSelection() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI
 
updateSeriesList() - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesBuilder
Updates the column parameters
UpdateSiteListUI - Class in org.hkijena.jipipe.ui.ijupdater
 
UpdateSiteListUI(JIPipeImageJPluginManager) - Constructor for class org.hkijena.jipipe.ui.ijupdater.UpdateSiteListUI
 
UpdateSiteListUI.Ranking - Class in org.hkijena.jipipe.ui.ijupdater
 
UpdateSitePlugin - Class in org.hkijena.jipipe.ui.extensions
Helper class that encapsulates an ImageJ update site into a JIPipePlugin
UpdateSitePlugin(UpdateSite) - Constructor for class org.hkijena.jipipe.ui.extensions.UpdateSitePlugin
 
UpdateSitePlugin(JIPipeImageJUpdateSiteDependency) - Constructor for class org.hkijena.jipipe.ui.extensions.UpdateSitePlugin
 
UpdateSitesFailedEvent(JIPipeModernPluginManager) - Constructor for class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager.UpdateSitesFailedEvent
 
UpdateSitesFailedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager.UpdateSitesFailedEventEmitter
 
UpdateSitesReadyEvent(JIPipeModernPluginManager) - Constructor for class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager.UpdateSitesReadyEvent
 
UpdateSitesReadyEventEmitter() - Constructor for class org.hkijena.jipipe.ui.extensions.JIPipeModernPluginManager.UpdateSitesReadyEventEmitter
 
UpdateSiteUI - Class in org.hkijena.jipipe.ui.ijupdater
 
UpdateSiteUI(UpdateSiteListUI, UpdateSite) - Constructor for class org.hkijena.jipipe.ui.ijupdater.UpdateSiteUI
 
updateSize() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeAnnotationGraphNodeUI
 
updateSize() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
Recalculates the UI size
updateSlotActiveAreas() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
updateSlots() - Method in class org.hkijena.jipipe.extensions.parameters.api.graph.SlotMapParameterCollection
Method that adds missing entries, or removes invalid entries based on the algorithm's slot configuration
updateSlots() - Method in class org.hkijena.jipipe.extensions.parameters.library.graph.InputSlotMapParameterCollection
 
updateSlots() - Method in class org.hkijena.jipipe.extensions.parameters.library.graph.OutputSlotMapParameterCollection
 
updateSlots() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
updateStatus() - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantInputPreviewPanel
 
updateStatus() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheManagerUI
Updates the UI status
updateStatus() - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueueButton
Updates the UI status
updateTitle() - Method in class org.hkijena.jipipe.ui.JIPipeProjectWindow
Updates the title based on the current state
updateUI() - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser.FileChooserComponent
 
updateView(boolean, boolean, boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
updateWholeNodeActiveAreas() - Method in class org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI
 
upload(Path, Set<String>, Map<String, String>, OMEROGateway, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROImageUploader
 
UploadOMEROImageAlgorithm - Class in org.hkijena.jipipe.extensions.omero.nodes.upload
 
UploadOMEROImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROImageAlgorithm
 
UploadOMEROImageAlgorithm(UploadOMEROImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROImageAlgorithm
 
UploadOMEROTableAlgorithm - Class in org.hkijena.jipipe.extensions.omero.nodes.upload
 
UploadOMEROTableAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROTableAlgorithm
 
UploadOMEROTableAlgorithm(UploadOMEROTableAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.omero.nodes.upload.UploadOMEROTableAlgorithm
 
uploadSliceToCanvas() - Method in class org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel2D
 
uploadSliceToCanvas() - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerPlugin2D
 
UsePlaceholderForMissingDataAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms
 
UsePlaceholderForMissingDataAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.UsePlaceholderForMissingDataAlgorithm
 
UsePlaceholderForMissingDataAlgorithm(UsePlaceholderForMissingDataAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.UsePlaceholderForMissingDataAlgorithm
 
userCanCreate() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory
 
userCanCreate() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
userCanCreate() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
userCanCreate() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
userCanCreate() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory
 
userCanCreate() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory
 
userCanCreate() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
userCanCreate() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory
Returns if nodes of this category can be created by users
userCanDelete() - Method in class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory
 
userCanDelete() - Method in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
userCanDelete() - Method in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
userCanDelete() - Method in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
userCanDelete() - Method in class org.hkijena.jipipe.api.nodes.categories.GraphAnnotationsNodeTypeCategory
 
userCanDelete() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory
 
userCanDelete() - Method in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
userCanDelete() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory
Returns if nodes of this category can be deleted by users
UserFriendlyErrorUI - Class in org.hkijena.jipipe.ui.components
Displays exceptions in a user-friendly way.
UserFriendlyErrorUI(JIPipeWorkbench, MarkdownDocument, int) - Constructor for class org.hkijena.jipipe.ui.components.UserFriendlyErrorUI
 
UserParameterDefinition(JIPipeDynamicParameterCollection, String, Class<?>) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection.UserParameterDefinition
 
UtilitiesPlugin - Class in org.hkijena.jipipe.extensions.utils
 
UtilitiesPlugin() - Constructor for class org.hkijena.jipipe.extensions.utils.UtilitiesPlugin
 

V

validatePlugins(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
Validates the plugins
validateProject(boolean) - Method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
Validates the project
validateUserDirectories(JIPipeNotificationInbox) - Method in class org.hkijena.jipipe.api.JIPipeProject
Checks if the project metadata user directories are properly set up.
value() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeInputSlot
 
value() - Method in class org.hkijena.jipipe.api.nodes.DefaultAddJIPipeOutputSlot
 
VALUE_LABELS - Static variable in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.EdgeFeature
 
VALUE_LABELS - Static variable in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.SpotFeature
 
VALUE_LABELS - Static variable in class org.hkijena.jipipe.extensions.ijtrackmate.parameters.TrackFeature
 
valueOf(String) - Static method in enum org.hkijena.jipipe.api.annotation.JIPipeDataAnnotationMergeMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.api.annotation.JIPipeTextAnnotationMergeMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.api.data.JIPipeDataSlotRole
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.api.data.JIPipeSlotType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm.IterationMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.api.JIPipeGraphType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseRole
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.api.nodes.JIPipeColumMatching
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.api.nodes.JIPipeGraphEdge.Shape
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.api.nodes.JIPipeGraphEdge.Visibility
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.api.nodes.JIPipeTextAnnotationMatchingMethod
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.api.notifications.JIPipeNotificationAction.Style
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.api.parameters.JIPipeParameterSerializationMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.api.run.JIPipeGraphRunPartitionInheritedBoolean
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.api.validation.JIPipeValidationReportEntryLevel
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.annotation.algorithms.SimplifyAnnotationsAlgorithm.AnnotationRemovalMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.cellpose.CellposeModel
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.cellpose.CellposePretrainedModel
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.expressions.TableColumnSourceExpressionParameter.TableSourceType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderParameterUI.Mode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.forms.ui.DataBatchStatus
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm.CriteriaMethod
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm.SegmentResultsMethod
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm.ThresholdMethod
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm.SpotSegmentationMethod
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurement
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurementColumn
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DOutline
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurement
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurementColumn
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.ijmultitemplatematching.TemplateMatchingMethod
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer.StrokeColorMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.ijweka.parameters.features.WekaFeature2D
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.ijweka.parameters.features.WekaFeature3D
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.ilastik.parameters.IlastikProjectValidationMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.CycleRemovalMethod
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.EndRemovalMethod
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm.BackgroundType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm.Method
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarPosition
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.MergeChannelsAlgorithm.ChannelColor
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm.Method
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm.Method
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm.Mode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.FrangiVesselnessFeatures.SlicingMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm.OutputType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm.FileFormat
Deprecated.
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm.FileFormat
Deprecated.
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm.Method
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyMath2DAlgorithm.Transformation
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyTransform2DAlgorithm.Transformation
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DAlgorithm.Operand
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DAlgorithm.Operation
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm.Operand
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm.Operation
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm.Attribute
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm.Operation
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm.Attribute
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm.Operation
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm.Operation
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm.Mode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm.Anchor
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm.Mode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm.Mode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurement
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementColumn
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiLabel
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm.DimensionOperation
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.HistogramGenerator.MultiChannelMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm.SliceThresholdMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm.Method
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.BorderMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.ScaleMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformFlip2DAlgorithm.FlipMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm.RotationMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.WrapMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.EigenvalueSelection2D
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.ImageROITargetArea
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.InterpolationMethod
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.Neighborhood2D
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.Neighborhood2D3D
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.Neighborhood3D
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OverlapStatistics
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.SourceWrapMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.utils.Reslicer.Direction
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ResultsTableFromFile.FileFormat
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEColorMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMETIFFCompression
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.AVICompression
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.BitDepth
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.HyperstackDimension
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageBlendMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.Measurement
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.MeasurementColumn
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.RoiRelationMeasurement
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.OptionalBitDepth
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIElementDrawingMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiOutline
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D.RendererStatus
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D.MaskColor
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PencilMaskDrawer2DTool.PencilShape
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.DisplayRangeStop
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.Image3DRenderType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl.DisplayRangeStop
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.StandardView
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.imp.datatypes.ImpImageOutputFormat
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.omnipose.OmniposeModel
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.omnipose.OmniposePretrainedModel
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.parameters.library.colors.ColorMap
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtraction.Mode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.parameters.library.primitives.FontStyleParameter
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.parameters.library.primitives.StringOrDouble.Mode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity.LengthUnit
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeInvertedMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI.DisplayRangeStop
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.parameters.library.roi.Anchor
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.parameters.library.util.LogicalOperation
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.parameters.library.util.SortOrder
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData.HistogramType_
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.plots.utils.ColorMap
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.python.PythonEnvironmentType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm.Dataset
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.settings.FileChooserSettings.FileChooserType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.settings.FileChooserSettings.LastDirectoryKey
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.tables.ColumnContentType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.extensions.tables.datatypes.TableColumnNormalization
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.ui.components.html.HTMLEditor.Mode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.ui.components.MessagePanel.MessageType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.Mode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.Mode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.CloseMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.SingletonTabMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.TabPlacement
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.ui.extension.JIPipeMenuExtensionTarget
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.EdgeMuteMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.ui.grapheditor.general.layout.GraphAutoLayout
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI.SlotStatus
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.ui.grapheditor.JIPipeGraphViewMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.ui.grapheditor.NodeHotKeyStorage.Hotkey
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.ui.theme.JIPipeUITheme
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.utils.ImageJCalibrationMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.utils.PathIOMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.utils.PathType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.utils.SizeFitMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.hkijena.jipipe.utils.ui.ListSelectionMode
Returns the enum constant of this type with the specified name.
values() - Static method in enum org.hkijena.jipipe.api.annotation.JIPipeDataAnnotationMergeMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.api.annotation.JIPipeTextAnnotationMergeMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.api.data.JIPipeDataSlotRole
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.api.data.JIPipeSlotType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.api.grouping.JIPipeGraphWrapperAlgorithm.IterationMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.api.JIPipeGraphType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabaseRole
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.api.nodes.JIPipeColumMatching
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.api.nodes.JIPipeGraphEdge.Shape
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.api.nodes.JIPipeGraphEdge.Visibility
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.api.nodes.JIPipeTextAnnotationMatchingMethod
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.api.notifications.JIPipeNotificationAction.Style
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.api.parameters.JIPipeParameterSerializationMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.api.run.JIPipeGraphRunPartitionInheritedBoolean
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.api.validation.JIPipeValidationReportEntryLevel
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.annotation.algorithms.SimplifyAnnotationsAlgorithm.AnnotationRemovalMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.cellpose.CellposeModel
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.cellpose.CellposePretrainedModel
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.expressions.TableColumnSourceExpressionParameter.TableSourceType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.expressions.ui.ExpressionBuilderParameterUI.Mode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.forms.ui.DataBatchStatus
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm.CriteriaMethod
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm.SegmentResultsMethod
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.IterativeThreshold3DAlgorithm.ThresholdMethod
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.SpotSegmentation3DAlgorithm.SpotSegmentationMethod
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurement
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurementColumn
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DOutline
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurement
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurementColumn
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.ijmultitemplatematching.TemplateMatchingMethod
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackDrawer.StrokeColorMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.ijweka.parameters.features.WekaFeature2D
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.ijweka.parameters.features.WekaFeature3D
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.ilastik.parameters.IlastikProjectValidationMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.CycleRemovalMethod
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.analyze.AnalyzeSkeleton2D3DAlgorithm.EndRemovalMethod
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm.BackgroundType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.background.RollingBallBackgroundEstimator2DAlgorithm.Method
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.calibration.ScaleBarGenerator.ScaleBarPosition
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.color.MergeChannelsAlgorithm.ChannelColor
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.contrast.HistogramContrastEnhancerAlgorithm.Method
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm.Method
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.edge.LaplacianEdgeDetectorAlgorithm.Mode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.FrangiVesselnessFeatures.SlicingMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.features.LocalMaxima2DAlgorithm.OutputType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportImageAlgorithm.FileFormat
Deprecated.
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.io.ExportTableAlgorithm.FileFormat
Deprecated.
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm.Method
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyMath2DAlgorithm.Transformation
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ApplyTransform2DAlgorithm.Transformation
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DAlgorithm.Operand
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageCalculator2DAlgorithm.Operation
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm.Operand
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.math.ImageComparer2DAlgorithm.Operation
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm.Attribute
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering2DAlgorithm.Operation
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm.Attribute
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.GrayscaleAttributeFiltering3DAlgorithm.Operation
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.morphology.MorphologyBinary2DAlgorithm.Operation
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.noise.RemoveOutliersFilter2DAlgorithm.Mode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm.Anchor
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.generate.TableToRectangularROIAlgorithm.Mode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.RoiFloodFillAlgorithm.Mode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurement
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementColumn
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiLabel
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm.DimensionOperation
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.statistics.HistogramGenerator.MultiChannelMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.AutoThreshold2DAlgorithm.SliceThresholdMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.local.LocalAutoThreshold2DAlgorithm.Method
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.BorderMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.ScaleMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformFlip2DAlgorithm.FlipMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.TransformRotate2DAlgorithm.RotationMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.WrapMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.EigenvalueSelection2D
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.ImageROITargetArea
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.InterpolationMethod
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.Neighborhood2D
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.Neighborhood2D3D
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.Neighborhood3D
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.OverlapStatistics
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.parameters.SourceWrapMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejalgorithms.utils.Reslicer.Direction
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.datasources.ResultsTableFromFile.FileFormat
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMEColorMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.parameters.OMETIFFCompression
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.AVICompression
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.BitDepth
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.HyperstackDimension
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageBlendMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.Measurement
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.MeasurementColumn
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.RoiRelationMeasurement
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.OptionalBitDepth
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.ROIElementDrawingMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imagejdatatypes.util.RoiOutline
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imageviewer.ImageViewerPanel3D.RendererStatus
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.MaskDrawerPlugin2D.MaskColor
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imageviewer.plugins2d.maskdrawer.PencilMaskDrawer2DTool.PencilShape
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imageviewer.utils.viewer2d.ImageViewer2DDisplayRangeControl.DisplayRangeStop
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.Image3DRenderType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.ImageViewer3DDisplayRangeControl.DisplayRangeStop
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.StandardView
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.imp.datatypes.ImpImageOutputFormat
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.omnipose.OmniposeModel
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.omnipose.OmniposePretrainedModel
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.parameters.library.colors.ColorMap
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.parameters.library.patterns.StringPatternExtraction.Mode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.parameters.library.primitives.FontStyleParameter
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.parameters.library.primitives.StringOrDouble.Mode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity.LengthUnit
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeInvertedMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.parameters.library.ranges.NumberRangeParameterEditorUI.DisplayRangeStop
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.parameters.library.roi.Anchor
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.parameters.library.util.LogicalOperation
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.parameters.library.util.SortOrder
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.plots.datatypes.HistogramPlotData.HistogramType_
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.plots.utils.ColorMap
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.python.PythonEnvironmentType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.r.algorithms.ImportRDatasetAlgorithm.Dataset
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.settings.FileChooserSettings.FileChooserType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.settings.FileChooserSettings.LastDirectoryKey
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.tables.ColumnContentType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.extensions.tables.datatypes.TableColumnNormalization
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.ui.components.html.HTMLEditor.Mode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.ui.components.MessagePanel.MessageType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.ui.components.pickers.JIPipeDataTypePicker.Mode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.ui.components.pickers.JIPipeNodeInfoPicker.Mode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.CloseMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.SingletonTabMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.ui.components.tabs.DocumentTabPane.TabPlacement
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.ui.extension.JIPipeMenuExtensionTarget
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI.EdgeMuteMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.ui.grapheditor.general.layout.GraphAutoLayout
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.ui.grapheditor.general.nodeui.JIPipeGraphNodeUI.SlotStatus
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.ui.grapheditor.JIPipeGraphViewMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.ui.grapheditor.NodeHotKeyStorage.Hotkey
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.ui.theme.JIPipeUITheme
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.utils.ImageJCalibrationMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.utils.PathIOMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.utils.PathType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.utils.SizeFitMode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.hkijena.jipipe.utils.ui.ListSelectionMode
Returns an array containing the constants of this enum type, in the order they are declared.
VARIABLE_ABSPATH - Static variable in class org.hkijena.jipipe.extensions.expressions.variables.PathFilterExpressionParameterVariablesInfo
 
VARIABLE_NAME - Static variable in class org.hkijena.jipipe.extensions.expressions.variables.PathFilterExpressionParameterVariablesInfo
 
VARIABLE_PARENT - Static variable in class org.hkijena.jipipe.extensions.expressions.variables.PathFilterExpressionParameterVariablesInfo
 
VARIABLE_PATH - Static variable in class org.hkijena.jipipe.extensions.expressions.variables.PathFilterExpressionParameterVariablesInfo
 
VariableExistsFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
VariableExistsFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.VariableExistsFunction
 
VariableExistsOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
VariableExistsOperator(int) - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.VariableExistsOperator
 
VARIABLES - Static variable in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter.VariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings.VariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByExpression.VariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.annotation.algorithms.SetSingleAnnotation.VariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.expressions.custom.JIPipeCustomExpressionVariablesParameterVariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.expressions.JIPipeProjectDirectoriesVariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.expressions.TableColumnSourceExpressionParameter.VariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm.VariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.ij3d.utils.AllROI3DMeasurementExpressionParameterVariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.ij3d.utils.AllROI3DRelationMeasurementExpressionParameterVariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.ij3d.utils.ROI3DMeasurementExpressionParameterVariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.ij3d.utils.ROI3DRelationMeasurementExpressionParameterVariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelOverlapStatisticsVariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm.VariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm.VariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm.VariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm.VariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm.VariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.ROI2DRelationMeasurementExpressionParameterVariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.RoiOverlapStatisticsVariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm.VariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.SplitRoiConnectedComponentsAlgorithm.GraphPostprocessingVariables
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.AllMeasurementExpressionParameterVariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.MeasurementExpressionParameterVariablesInfo
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.plots.nodes.PlotTablesAlgorithm.VariablesInfo
Deprecated.
 
VARIABLES - Static variable in class org.hkijena.jipipe.extensions.tables.nodes.filter.FilterTablesAlgorithm.VariablesInfo
 
VariableSelectorList - Class in org.hkijena.jipipe.extensions.expressions
Panel that allows the user to select an ExpressionFunction
VariableSelectorList(Set<JIPipeExpressionParameterVariableInfo>) - Constructor for class org.hkijena.jipipe.extensions.expressions.VariableSelectorList
 
VariableSelectorList.ExpressionVariableRenderer - Class in org.hkijena.jipipe.extensions.expressions
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByExpression.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.SetSingleAnnotation.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.expressions.DataRowQueryExpression.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.expressions.NumericFunctionExpression.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.expressions.TableColumnSourceExpressionParameter.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.filter.FilterRoi3DListsAlgorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.ConditionalInverterAlgorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression2DAlgorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.filter.FilterLabelsByExpression3DAlgorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.labels.LabelsToROIAlgorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsByNameAlgorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.convert.ROIToLabelsExpressionAlgorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterRoiByNameAlgorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.filter.FilterROIListsAlgorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.modify.ChangeRoiPropertiesFromExpressionsAlgorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.roi.sort.SortRoiListByExpressionsAndMeasurementsAlgorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16UAlgorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D16Uv2Algorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32FAlgorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D32Fv2Algorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8UAlgorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.threshold.CustomAutoThreshold2D8Uv2Algorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.library.primitives.ranges.IntegerRange.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.plots.nodes.PlotTablesAlgorithm.VariablesInfo
Deprecated.
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.processes.ProcessEnvironment.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.filter.FilterTablesAlgorithm.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm.VariablesInfo
Deprecated.
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.tables.nodes.rows.ApplyExpressionPerRowAlgorithm2.VariablesInfo
 
VariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.RunExpressionAlgorithm.VariablesInfo
 
variableToKey(String) - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.SpotFeatureVariablesInfo
 
variableToKey(String) - Static method in class org.hkijena.jipipe.extensions.ijtrackmate.utils.TrackFeatureVariablesInfo
 
VectorAddFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.vector
 
VectorAddFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.vector.VectorAddFunction
 
VectorEuclideanNormFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.vector
 
VectorEuclideanNormFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.vector.VectorEuclideanNormFunction
 
VectorManhattanNormFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.vector
 
VectorManhattanNormFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.vector.VectorManhattanNormFunction
 
VectorMaximumNormFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.vector
 
VectorMaximumNormFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.vector.VectorMaximumNormFunction
 
VectorMultiplyScalarFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.vector
 
VectorMultiplyScalarFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.vector.VectorMultiplyScalarFunction
 
VectorNormalizeFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.vector
 
VectorNormalizeFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.vector.VectorNormalizeFunction
 
VectorPixel2DExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
Variable source that allows to address x, y, and value
VectorPixel2DExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.VectorPixel2DExpressionParameterVariablesInfo
 
VectorPixel5DExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
Variable source that allows to address x, y, and value
VectorPixel5DExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.VectorPixel5DExpressionParameterVariablesInfo
 
VectorScalarProductFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.vector
 
VectorScalarProductFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.vector.VectorScalarProductFunction
 
VectorSubtractFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.vector
 
VectorSubtractFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.vector.VectorSubtractFunction
 
VectorUtils - Class in org.hkijena.jipipe.utils
 
VectorUtils() - Constructor for class org.hkijena.jipipe.utils.VectorUtils
 
verboseName - Variable in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.DatasetEntryProvider.DatasetEntry
 
VersionUtils - Class in org.hkijena.jipipe.utils
 
VersionUtils() - Constructor for class org.hkijena.jipipe.utils.VersionUtils
 
vertexAdded(GraphVertexChangeEvent<V>) - Method in class org.hkijena.jipipe.utils.WeakPredecessorInspector
 
VertexMaskParameter - Class in org.hkijena.jipipe.extensions.ijfilaments.parameters
 
VertexMaskParameter() - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.parameters.VertexMaskParameter
 
VertexMaskParameter(VertexMaskParameter) - Constructor for class org.hkijena.jipipe.extensions.ijfilaments.parameters.VertexMaskParameter
 
vertexRemoved(GraphVertexChangeEvent<V>) - Method in class org.hkijena.jipipe.utils.WeakPredecessorInspector
 
VerticalToolBar - Class in org.hkijena.jipipe.ui.components
 
VerticalToolBar() - Constructor for class org.hkijena.jipipe.ui.components.VerticalToolBar
 
Video2DExporterRun - Class in org.hkijena.jipipe.extensions.imageviewer.runs
 
Video2DExporterRun(JIPipeImageViewer, Path, ImageSliceIndex, HyperstackDimension, int, AVICompression, int) - Constructor for class org.hkijena.jipipe.extensions.imageviewer.runs.Video2DExporterRun
 
ViewOnlyMenuItem - Class in org.hkijena.jipipe.utils.ui
 
ViewOnlyMenuItem() - Constructor for class org.hkijena.jipipe.utils.ui.ViewOnlyMenuItem
 
ViewOnlyMenuItem(Icon) - Constructor for class org.hkijena.jipipe.utils.ui.ViewOnlyMenuItem
 
ViewOnlyMenuItem(String) - Constructor for class org.hkijena.jipipe.utils.ui.ViewOnlyMenuItem
 
ViewOnlyMenuItem(Action) - Constructor for class org.hkijena.jipipe.utils.ui.ViewOnlyMenuItem
 
ViewOnlyMenuItem(String, Icon) - Constructor for class org.hkijena.jipipe.utils.ui.ViewOnlyMenuItem
 
viewToModel(float, float, Shape, Position.Bias[]) - Method in class org.hkijena.jipipe.ui.components.html.ExtendedImageView
Provides a mapping from the view coordinate space to the logical coordinate space of the model.
VolumeOpening2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary
 
VolumeOpening2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.VolumeOpening2DAlgorithm
Instantiates a new node type.
VolumeOpening2DAlgorithm(VolumeOpening2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.VolumeOpening2DAlgorithm
Instantiates a new node type.
VolumeOpening3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary
 
VolumeOpening3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.VolumeOpening3DAlgorithm
Instantiates a new node type.
VolumeOpening3DAlgorithm(VolumeOpening3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.VolumeOpening3DAlgorithm
Instantiates a new node type.
Voronoi2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary
Wrapper around EDM
Voronoi2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.Voronoi2DAlgorithm
 
Voronoi2DAlgorithm(Voronoi2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.binary.Voronoi2DAlgorithm
 
Voronoi3DAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.binary
 
Voronoi3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.binary.Voronoi3DAlgorithm
 
Voronoi3DAlgorithm(Voronoi3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.binary.Voronoi3DAlgorithm
 

W

waitFor() - Method in class org.hkijena.jipipe.utils.ProcessUtils.ProcessTree
 
walkInternalResourceFolder(String) - Static method in class org.hkijena.jipipe.utils.ResourceUtils
Iterates through all internal resources and
warn(Object, String) - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROToJIPipeLogger
 
warn(Object, LogMessage) - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROToJIPipeLogger
 
Warp2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
 
Warp2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.Warp2DAlgorithm
 
Warp2DAlgorithm(Warp2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.Warp2DAlgorithm
 
wasCanceled - Variable in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
Watershed3DSegmentationAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.segmentation
 
Watershed3DSegmentationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.Watershed3DSegmentationAlgorithm
 
Watershed3DSegmentationAlgorithm(Watershed3DSegmentationAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.segmentation.Watershed3DSegmentationAlgorithm
 
Watershed3DSplittingAlgorithm - Class in org.hkijena.jipipe.extensions.ij3d.nodes.binary
 
Watershed3DSplittingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.binary.Watershed3DSplittingAlgorithm
 
Watershed3DSplittingAlgorithm(Watershed3DSplittingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ij3d.nodes.binary.Watershed3DSplittingAlgorithm
 
WeakObjectSubscriber(Listener) - Constructor for class org.hkijena.jipipe.api.events.JIPipeEventEmitter.WeakObjectSubscriber
 
WeakPredecessorInspector<V,E> - Class in org.hkijena.jipipe.utils
Calculates the predecessor set of a vertex
WeakPredecessorInspector(Graph<V, E>) - Constructor for class org.hkijena.jipipe.utils.WeakPredecessorInspector
 
WeakStore<T> - Class in org.hkijena.jipipe.utils.data
A weakly owning store (using a WeakReference
WeakStore(T) - Constructor for class org.hkijena.jipipe.utils.data.WeakStore
 
WeakStore(WeakReference<T>) - Constructor for class org.hkijena.jipipe.utils.data.WeakStore
 
WebUtils - Class in org.hkijena.jipipe.utils
 
WebUtils() - Constructor for class org.hkijena.jipipe.utils.WebUtils
 
weight(double, double) - Static method in class org.hkijena.jipipe.api.nodes.database.JIPipeNodeDatabase
 
WEIGHT_DESCRIPTION - Static variable in class org.hkijena.jipipe.api.nodes.database.WeightedTokens
 
WEIGHT_MENU - Static variable in class org.hkijena.jipipe.api.nodes.database.WeightedTokens
 
WEIGHT_NAME - Static variable in class org.hkijena.jipipe.api.nodes.database.WeightedTokens
 
WeightedTokens - Class in org.hkijena.jipipe.api.nodes.database
 
WeightedTokens() - Constructor for class org.hkijena.jipipe.api.nodes.database.WeightedTokens
 
weights - Variable in class org.hkijena.jipipe.api.nodes.database.WeightedTokens
 
WekaClassification2DAlgorithm - Class in org.hkijena.jipipe.extensions.ijweka.nodes
 
WekaClassification2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijweka.nodes.WekaClassification2DAlgorithm
 
WekaClassification2DAlgorithm(WekaClassification2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijweka.nodes.WekaClassification2DAlgorithm
 
WekaClassification3DAlgorithm - Class in org.hkijena.jipipe.extensions.ijweka.nodes
 
WekaClassification3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijweka.nodes.WekaClassification3DAlgorithm
 
WekaClassification3DAlgorithm(WekaClassification3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijweka.nodes.WekaClassification3DAlgorithm
 
WekaClassifierParameter - Class in org.hkijena.jipipe.extensions.ijweka.parameters
A parameter type that stores a Weka classifier
WekaClassifierParameter() - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.WekaClassifierParameter
 
WekaClassifierParameter(WekaClassifierParameter) - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.WekaClassifierParameter
 
WekaClassifierParameter.Deserializer - Class in org.hkijena.jipipe.extensions.ijweka.parameters
 
WekaClassifierParameter.Serializer - Class in org.hkijena.jipipe.extensions.ijweka.parameters
 
WekaClassifierParameterEditorUI - Class in org.hkijena.jipipe.extensions.ijweka.parameters
 
WekaClassifierParameterEditorUI(JIPipeWorkbench, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.WekaClassifierParameterEditorUI
 
WekaClassifierSettings - Class in org.hkijena.jipipe.extensions.ijweka.parameters
 
WekaClassifierSettings() - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.WekaClassifierSettings
 
WekaClassifierSettings(WekaClassifierSettings) - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.WekaClassifierSettings
 
WekaFeature2D - Enum in org.hkijena.jipipe.extensions.ijweka.parameters.features
Enum of the standard WekaSegmentation features supported by FeatureStack
WekaFeature2DSettings - Class in org.hkijena.jipipe.extensions.ijweka.parameters.collections
Settings related to features
WekaFeature2DSettings() - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature2DSettings
 
WekaFeature2DSettings(WekaFeature2DSettings) - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature2DSettings
 
WekaFeature3D - Enum in org.hkijena.jipipe.extensions.ijweka.parameters.features
Enum of the standard WekaSegmentation features supported by FeatureStack
WekaFeature3DSettings - Class in org.hkijena.jipipe.extensions.ijweka.parameters.collections
Settings related to features
WekaFeature3DSettings() - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature3DSettings
 
WekaFeature3DSettings(WekaFeature3DSettings) - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaFeature3DSettings
 
WekaFeatureSet2D - Class in org.hkijena.jipipe.extensions.ijweka.parameters.features
Parameter that allows users to select a set of WekaFeature2D
WekaFeatureSet2D() - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.features.WekaFeatureSet2D
 
WekaFeatureSet2D(WekaFeatureSet2D) - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.features.WekaFeatureSet2D
 
WekaFeatureSet3D - Class in org.hkijena.jipipe.extensions.ijweka.parameters.features
Parameter that allows users to select a set of WekaFeature3D
WekaFeatureSet3D() - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.features.WekaFeatureSet3D
 
WekaFeatureSet3D(WekaFeatureSet3D) - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.features.WekaFeatureSet3D
 
WekaModelData - Class in org.hkijena.jipipe.extensions.ijweka.datatypes
Wrapper around Cellpose models
WekaModelData(WekaSegmentation) - Constructor for class org.hkijena.jipipe.extensions.ijweka.datatypes.WekaModelData
 
WekaModelData(WekaModelData) - Constructor for class org.hkijena.jipipe.extensions.ijweka.datatypes.WekaModelData
 
WekaModelData.Metadata - Class in org.hkijena.jipipe.extensions.ijweka.datatypes
Additional metada required for the correct deserialization of the model
WekaPlugin - Class in org.hkijena.jipipe.extensions.ijweka
 
WekaPlugin() - Constructor for class org.hkijena.jipipe.extensions.ijweka.WekaPlugin
 
WekaTiling2DSettings - Class in org.hkijena.jipipe.extensions.ijweka.parameters.collections
 
WekaTiling2DSettings() - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling2DSettings
 
WekaTiling2DSettings(WekaTiling2DSettings) - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling2DSettings
 
WekaTiling3DSettings - Class in org.hkijena.jipipe.extensions.ijweka.parameters.collections
 
WekaTiling3DSettings() - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling3DSettings
 
WekaTiling3DSettings(WekaTiling3DSettings) - Constructor for class org.hkijena.jipipe.extensions.ijweka.parameters.collections.WekaTiling3DSettings
 
WekaTrainingLabels2DAlgorithm - Class in org.hkijena.jipipe.extensions.ijweka.nodes
 
WekaTrainingLabels2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingLabels2DAlgorithm
 
WekaTrainingLabels2DAlgorithm(WekaTrainingLabels2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingLabels2DAlgorithm
 
WekaTrainingLabels2DAlgorithm2 - Class in org.hkijena.jipipe.extensions.ijweka.nodes
 
WekaTrainingLabels2DAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingLabels2DAlgorithm2
 
WekaTrainingLabels2DAlgorithm2(WekaTrainingLabels2DAlgorithm2) - Constructor for class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingLabels2DAlgorithm2
 
WekaTrainingMask2DAlgorithm - Class in org.hkijena.jipipe.extensions.ijweka.nodes
 
WekaTrainingMask2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingMask2DAlgorithm
 
WekaTrainingMask2DAlgorithm(WekaTrainingMask2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingMask2DAlgorithm
 
WekaTrainingMask2DAlgorithm2 - Class in org.hkijena.jipipe.extensions.ijweka.nodes
 
WekaTrainingMask2DAlgorithm2(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingMask2DAlgorithm2
 
WekaTrainingMask2DAlgorithm2(WekaTrainingMask2DAlgorithm2) - Constructor for class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingMask2DAlgorithm2
 
WekaTrainingROI2DAlgorithm - Class in org.hkijena.jipipe.extensions.ijweka.nodes
 
WekaTrainingROI2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingROI2DAlgorithm
 
WekaTrainingROI2DAlgorithm(WekaTrainingROI2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingROI2DAlgorithm
 
WekaTrainingROI3DAlgorithm - Class in org.hkijena.jipipe.extensions.ijweka.nodes
 
WekaTrainingROI3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingROI3DAlgorithm
 
WekaTrainingROI3DAlgorithm(WekaTrainingROI3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.ijweka.nodes.WekaTrainingROI3DAlgorithm
 
WekaUtils - Class in org.hkijena.jipipe.extensions.ijweka
 
WekaUtils() - Constructor for class org.hkijena.jipipe.extensions.ijweka.WekaUtils
 
WelcomePanel - Class in org.hkijena.jipipe.ui.documentation
UI that shows some introduction
WelcomePanel(JIPipeProjectWorkbench) - Constructor for class org.hkijena.jipipe.ui.documentation.WelcomePanel
Creates a new instance
wheel_zoom(MouseEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
This method should be called, if the specified MouseEvent should affect zooming based on wheel movement.
WhereFunction - Class in org.hkijena.jipipe.extensions.expressions.functions.control
 
WhereFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.control.WhereFunction
 
WHITE_TRANSPARENT - Static variable in class org.hkijena.jipipe.utils.ColorUtils
 
WhiteToRedTrackBackground - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
WhiteToRedTrackBackground() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.WhiteToRedTrackBackground
 
width - Variable in class org.hkijena.jipipe.extensions.imagejalgorithms.utils.HoughLines
 
willBeActivatedOnNextStartup(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
willBeDeactivatedOnNextStartup(String) - Method in class org.hkijena.jipipe.api.registries.JIPipeExtensionRegistry
 
WINDOW_CLOSED_EVENT_EMITTER - Static variable in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
 
WINDOW_CLOSED_EVENT_EMITTER - Static variable in class org.hkijena.jipipe.ui.JIPipeProjectWindow
 
WINDOW_OPENED_EVENT_EMITTER - Static variable in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
 
WINDOW_OPENED_EVENT_EMITTER - Static variable in class org.hkijena.jipipe.ui.JIPipeProjectWindow
 
windowActivated(WindowEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerCacheDataViewerWindow
 
windowActivated(WindowEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerWindow
 
windowClosed(WindowEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerCacheDataViewerWindow
 
windowClosed(WindowEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerWindow
 
WindowClosedEvent - Class in org.hkijena.jipipe.ui.events
Triggered when a JIPipe window was closed
WindowClosedEvent(Window) - Constructor for class org.hkijena.jipipe.ui.events.WindowClosedEvent
 
WindowClosedEventEmitter - Class in org.hkijena.jipipe.ui.events
 
WindowClosedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.events.WindowClosedEventEmitter
 
WindowClosedEventListener - Interface in org.hkijena.jipipe.ui.events
 
windowClosing(WindowEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerCacheDataViewerWindow
 
windowClosing(WindowEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerWindow
 
windowDeactivated(WindowEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerCacheDataViewerWindow
 
windowDeactivated(WindowEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerWindow
 
windowDeiconified(WindowEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerCacheDataViewerWindow
 
windowDeiconified(WindowEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerWindow
 
WindowExternalEditor(JIPipeWorkbench, WeakReference<JIPipeParameterCollection>, String, JIPipeParameterTree, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.api.scripts.ScriptParameterEditorUI.WindowExternalEditor
 
windowIconified(WindowEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerCacheDataViewerWindow
 
windowIconified(WindowEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerWindow
 
WindowListCellRenderer<T extends Frame> - Class in org.hkijena.jipipe.ui.components.renderers
 
WindowListCellRenderer() - Constructor for class org.hkijena.jipipe.ui.components.renderers.WindowListCellRenderer
 
windowOpened(WindowEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerCacheDataViewerWindow
 
windowOpened(WindowEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.JIPipeImageViewerWindow
 
WindowOpenedEvent - Class in org.hkijena.jipipe.ui.events
Triggered when a window was opened
WindowOpenedEvent(Window) - Constructor for class org.hkijena.jipipe.ui.events.WindowOpenedEvent
 
WindowOpenedEventEmitter - Class in org.hkijena.jipipe.ui.events
 
WindowOpenedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.events.WindowOpenedEventEmitter
 
WindowOpenedEventListener - Interface in org.hkijena.jipipe.ui.events
 
WindowQueryExpressionParameterVariablesInfo - Class in org.hkijena.jipipe.extensions.expressions
 
WindowQueryExpressionParameterVariablesInfo() - Constructor for class org.hkijena.jipipe.extensions.expressions.WindowQueryExpressionParameterVariablesInfo
 
WindowWatcher() - Constructor for class org.hkijena.jipipe.JIPipeLauncher.WindowWatcher
 
WITH_DIALOG_EDITOR_BUTTON - Static variable in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
WITH_DOCUMENTATION - Static variable in class org.hkijena.jipipe.ui.components.FormPanel
Flag that indicates that a documentation panel is shown.
WITH_PIN_TOOLBAR - Static variable in class org.hkijena.jipipe.ui.components.FlexContentPanel
 
WITH_RIBBON - Static variable in class org.hkijena.jipipe.ui.components.FlexContentPanel
 
WITH_SCROLL_BAR - Static variable in class org.hkijena.jipipe.ui.components.html.HTMLEditor
 
WITH_SCROLLING - Static variable in class org.hkijena.jipipe.ui.components.FormPanel
Flag that makes the content be wrapped in a JScrollPane
WITH_SEARCH_BAR - Static variable in class org.hkijena.jipipe.ui.parameters.ParameterPanel
With this flag, there will be a search bar for parameters.
WITH_SIDEBAR - Static variable in class org.hkijena.jipipe.ui.components.FlexContentPanel
 
WITH_TOOLBAR - Static variable in class org.hkijena.jipipe.ui.components.FlexContentPanel
 
WITHOUT_COLLAPSE - Static variable in class org.hkijena.jipipe.ui.parameters.ParameterPanel
With this flag, collapsing is disabled
WITHOUT_LABEL_SEPARATION - Static variable in class org.hkijena.jipipe.ui.parameters.ParameterPanel
With this flag, parameters that do not show a label are not put below anymore
withoutInput() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Disables input
withoutOutput() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Disables output
wordWrappedHTML(String, int) - Static method in class org.hkijena.jipipe.utils.StringUtils
Create word wrapping in HTML.
wordWrappedHTMLElement(String, int) - Static method in class org.hkijena.jipipe.utils.StringUtils
Create word wrapping in HTML.
WorkbenchNotificationInboxUI - Class in org.hkijena.jipipe.ui.notifications
 
WorkbenchNotificationInboxUI(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.ui.notifications.WorkbenchNotificationInboxUI
 
WorkbenchNotificationUI - Class in org.hkijena.jipipe.ui.notifications
 
WorkbenchNotificationUI(WorkbenchNotificationInboxUI, JIPipeNotification, boolean, boolean) - Constructor for class org.hkijena.jipipe.ui.notifications.WorkbenchNotificationUI
 
wrap(JIPipeData, JIPipeDataSource) - Static method in class org.hkijena.jipipe.api.data.sources.JIPipeDataTableDataSource
Ensures that a table data source is present.
wrap(JIPipeData, JIPipeDataSource) - Static method in class org.hkijena.jipipe.api.data.sources.JIPipeWeakDataTableDataSource
Ensures that a table data source is present.
wrap() - Method in class org.hkijena.jipipe.extensions.imagej2.datatypes.ImageJ2DatasetData
Wraps the IJ2 image to an IJ1 image data
wrap(int, int, int) - Method in enum org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform.WrapMode
 
wrap(int) - Method in class org.hkijena.jipipe.extensions.parameters.library.markup.HTMLText
Returns a copy of this text that introduces line-breaks
wrapImage(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.ij3d.IJ3DUtils
 
WrapLayout - Class in org.hkijena.jipipe.ui.components
Adapted from ...
WrapLayout() - Constructor for class org.hkijena.jipipe.ui.components.WrapLayout
Constructs a new WrapLayout with a left alignment and a default 5-unit horizontal and vertical gap.
WrapLayout(int) - Constructor for class org.hkijena.jipipe.ui.components.WrapLayout
Constructs a new FlowLayout with the specified alignment and a default 5-unit horizontal and vertical gap.
WrapLayout(int, int, int) - Constructor for class org.hkijena.jipipe.ui.components.WrapLayout
Creates a new flow layout manager with the indicated alignment and the indicated horizontal and vertical gaps.
WrapMode - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.transform
 
WrapperColumnHeaderRenderer(Store<JIPipeDataTable>) - Constructor for class org.hkijena.jipipe.ui.batchassistant.DataBatchAssistantDataTableUI.WrapperColumnHeaderRenderer
Creates a new instance
WrapperColumnHeaderRenderer(Store<JIPipeDataTable>) - Constructor for class org.hkijena.jipipe.ui.datatable.JIPipeExtendedDataTableUI.WrapperColumnHeaderRenderer
Creates a new instance
WrapperColumnHeaderRenderer(Store<JIPipeDataTable>) - Constructor for class org.hkijena.jipipe.ui.datatracer.DataTracerDataTableUI.WrapperColumnHeaderRenderer
Creates a new instance
write(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeFileSystemWriteDataStorage
 
write(String) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeWriteDataStorage
Creates an output stream that writes the specified file element.
write(Path) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeWriteDataStorage
Creates an output stream that writes the specified file element.
write(Path) - Method in class org.hkijena.jipipe.api.data.storage.JIPipeZIPWriteDataStorage
 
write(int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfoOutputStream
 
write(int) - Method in class org.hkijena.jipipe.utils.UnclosableOutputStream
 
writeBytes(Path, byte[]) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeWriteDataStorage
Writes a byte array
writeCalibration(ImagePlus, Map<ImageSliceIndex, DisplayRange>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.BooleanFormData
 
writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.DoubleFormData
 
writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.EnumFormData
 
writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.FormData
This method should write any changes into the data batch
writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.GroupHeaderFormData
 
writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.IntegerFormData
 
writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.PathFormData
 
writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.forms.datatypes.StringFormData
 
writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.MaskDrawerFormData
 
writeData(JIPipeMultiIterationStep) - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.forms.ROIDrawerFormData
 
writeDataset(File, String, ImgPlus<T>) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.Hdf5
Hdf5.writeDataset(java.io.File, java.lang.String, net.imagej.ImgPlus<T>) without compression, axis reordering and callback.
writeDataset(File, String, ImgPlus<T>, int) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.Hdf5
writeDataset(File, String, ImgPlus<T>, int, List<AxisType>) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.Hdf5
writeDataset(File, String, ImgPlus<T>, int, List<AxisType>, LongConsumer) - Static method in class org.hkijena.jipipe.extensions.ilastik.utils.hdf5.Hdf5
Write image contents to HDF5 dataset, creating/overwriting file and dataset if needed.
writeEnvironmentToParameters(T, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.environments.EasyInstallExternalEnvironmentInstaller
This method should write the environment to the parameter access Will be executed on the Swing thread (via invokeLater)
writeEnvironmentToParameters(PythonEnvironment, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.cellpose.installers.CellposeEasyInstaller
 
writeEnvironmentToParameters(ProcessEnvironment, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.ilastik.installers.IlastikEasyInstaller
 
writeEnvironmentToParameters(PythonEnvironment, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.omnipose.installers.OmniposeEasyInstaller
 
writeEnvironmentToParameters(JIPipePythonAdapterLibraryEnvironment, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.python.adapter.JIPipePythonAdapterLibraryEnvironmentInstaller
 
writeEnvironmentToParameters(PythonEnvironment, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.python.installers.PythonEasyInstaller
 
writeEnvironmentToParameters(REnvironment, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.extensions.r.installers.REasyInstaller
 
writeImage(BufferedImage, String) - Static method in class org.hkijena.jipipe.utils.ui.ScreenImage
Write a BufferedImage to a File.
writeImageToMovie(ImagePlus, HyperstackDimension, double, Path, AVICompression, int, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
writeJSON(Path, Object) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeWriteDataStorage
Writes an object as JSON
writeText(Path, String) - Method in interface org.hkijena.jipipe.api.data.storage.JIPipeWriteDataStorage
Writes an object as JSON
writeTo(FHT) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFTData.FFTInfo
 
writeToFolder(List<? extends JIPipeDataTable>, Path, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter
Writes data to the specified folder
writeToFolder(JIPipeDataTable, Path, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter
Writes data to the specified folder
writeToFolder(JIPipeDataTable, Path, JIPipeProgressInfo, Set<String>) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter
Writes data to the specified folder
writeToFolder(JIPipeDataTable, int, Path, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter
Writes data to the specified folder
writeToFolder(JIPipeDataTable, int, Path, JIPipeProgressInfo, Set<String>) - Method in class org.hkijena.jipipe.api.annotation.JIPipeDataByMetadataExporter
Writes data to the specified folder
writeToVariables(JIPipeExpressionVariablesMap, boolean, String, boolean, String) - Method in class org.hkijena.jipipe.extensions.expressions.custom.JIPipeCustomExpressionVariablesParameter
Writes the parameter values to variables
writeToVariables(JIPipeExpressionVariablesMap) - Method in class org.hkijena.jipipe.extensions.expressions.custom.JIPipeCustomExpressionVariablesParameter
Writes the parameter values to variables with default configuration
writeToVariables(Filaments3DData, FilamentEdge, JIPipeExpressionVariablesMap, String) - Static method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentEdgeVariablesInfo
 
writeToVariables(Filaments3DData, FilamentVertex, FilamentVertex, JIPipeExpressionVariablesMap, String) - Static method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentUnconnectedEdgeVariablesInfo
 
writeToVariables(Filaments3DData, FilamentVertex, JIPipeExpressionVariablesMap, String) - Static method in class org.hkijena.jipipe.extensions.ijfilaments.util.FilamentVertexVariablesInfo
 

X

XMLData - Class in org.hkijena.jipipe.extensions.strings
 
XMLData(String) - Constructor for class org.hkijena.jipipe.extensions.strings.XMLData
 
XMLData(StringData) - Constructor for class org.hkijena.jipipe.extensions.strings.XMLData
 
XmlUtils - Class in org.hkijena.jipipe.utils.xml
 
XmlUtils() - Constructor for class org.hkijena.jipipe.utils.xml.XmlUtils
 
XYPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
Contains data for XY plots Any plot has following columns: X (Double), Y (Double)
XYPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
Creates a new instance
XYPlotData(XYPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
Creates a copy

Y

yybegin(int) - Method in class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
Enters a new lexical state
yycharat(int) - Method in class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
Returns the character at position pos from the matched text.
yyclose() - Method in class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
Closes the input stream.
YYEOF - Static variable in class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
This character denotes the end of file
YYINITIAL - Static variable in class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
 
yylength() - Method in class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
Returns the length of the matched text region.
yylex() - Method in class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
Resumes scanning until the next regular expression is matched, the end of input is encountered or an I/O-Error occurs.
yypushback(int) - Method in class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
Pushes the specified amount of characters back into the input stream.
yyreset(Reader) - Method in class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
Resets the scanner to read from a new input stream.
yytext() - Method in class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
Returns the text matched by the current regular expression.

Z

zeroSliceIndexToOneStackIndex(int, int, int, ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Stack index (zero-based)
zeroSliceIndexToOneStackIndex(int, int, int, int, int, int) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Stack index (zero-based)
zeroSliceIndexToOneStackIndex(ImagePlus) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
Converts this zero-based index into a one-based index and returns a one-based stack index
zeroSliceIndexToOneStackIndex(int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
Converts this zero-based index into a one-based index and returns a one-based stack index
ZeroTableColumn - Class in org.hkijena.jipipe.extensions.tables.datatypes
Generates numbers from 0 to row count
ZeroTableColumn() - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.ZeroTableColumn
 
zeroToOne() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
 
zipDirectory(Path, String, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.ArchiveUtils
 
zipFileOrDirectory(Path, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.ArchiveUtils
 
zoom(double) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Zoom by the specified amounts of units.
zoom(MouseEvent) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
This method should be called, if the specified MouseEvent should affect zooming based on vertical mouse dragging.
zoom(double) - Method in class org.hkijena.jipipe.utils.PointRange
Apply scaling to all components and return the result.
ZoomChangedEvent(ZoomViewPort) - Constructor for class org.hkijena.jipipe.ui.components.ZoomViewPort.ZoomChangedEvent
 
ZoomChangedEventEmitter() - Constructor for class org.hkijena.jipipe.ui.components.ZoomViewPort.ZoomChangedEventEmitter
 
ZoomIcon - Class in org.hkijena.jipipe.ui.components.icons
Icon that adapts to the zoom level of a ZoomViewPort
ZoomIcon(ImageIcon, ZoomViewPort) - Constructor for class org.hkijena.jipipe.ui.components.icons.ZoomIcon
 
zoomIn() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
zoomOut() - Method in class org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphCanvasUI
 
zoomTo(double) - Method in class org.hkijena.jipipe.extensions.imageviewer.utils.viewer3d.universe.CustomInteractiveViewPlatformTransformer
Moves the view back (i.e. in the z-direction of the image plate) to the specified distance.
ZoomViewPort - Interface in org.hkijena.jipipe.ui.components
 
ZoomViewPort.ZoomChangedEvent - Class in org.hkijena.jipipe.ui.components
Triggered by ZoomViewPort when the zoom was changed
ZoomViewPort.ZoomChangedEventEmitter - Class in org.hkijena.jipipe.ui.components
 
ZoomViewPort.ZoomChangedEventListener - Interface in org.hkijena.jipipe.ui.components
 
ZProjectorAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions
Wrapper around ZProjector
ZProjectorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm
Instantiates a new node type.
ZProjectorAlgorithm(ZProjectorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions.ZProjectorAlgorithm
Instantiates a new node type.
ZProjectorAlgorithm.Method - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.nodes.dimensions
Available transformation functions
A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 
Skip navigation links

Copyright © 2020–2024 Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute (HKI). All rights reserved.