Uses of Class
org.hkijena.jipipe.api.nodes.iterationstep.JIPipeMultiIterationStep

Packages that use JIPipeMultiIterationStep

Package	Description
org.hkijena.jipipe.api
org.hkijena.jipipe.api.nodes.algorithm
org.hkijena.jipipe.api.nodes.iterationstep
org.hkijena.jipipe.desktop.app.batchassistant
org.hkijena.jipipe.desktop.app.datatable
org.hkijena.jipipe.plugins.annotation.algorithms
org.hkijena.jipipe.plugins.cellpose.algorithms.cp2
org.hkijena.jipipe.plugins.cellpose.algorithms.cp3
org.hkijena.jipipe.plugins.cellpose.legacy.algorithms
org.hkijena.jipipe.plugins.expressions
org.hkijena.jipipe.plugins.filesystem.algorithms.local
org.hkijena.jipipe.plugins.forms.algorithms
org.hkijena.jipipe.plugins.forms.datatypes
org.hkijena.jipipe.plugins.forms.ui
org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.merge
org.hkijena.jipipe.plugins.ijfilaments.nodes.merge
org.hkijena.jipipe.plugins.ijmultitemplatematching
org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots
org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks
org.hkijena.jipipe.plugins.ijweka.nodes
org.hkijena.jipipe.plugins.ilastik.nodes
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge
org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform
org.hkijena.jipipe.plugins.omero.nodes.annotate
org.hkijena.jipipe.plugins.omero.nodes.navigate
org.hkijena.jipipe.plugins.omnipose.algorithms
org.hkijena.jipipe.plugins.omnipose.legacy.algorithms
org.hkijena.jipipe.plugins.plots.nodes
org.hkijena.jipipe.plugins.python
org.hkijena.jipipe.plugins.python.algorithms.jython
org.hkijena.jipipe.plugins.python.algorithms.python
org.hkijena.jipipe.plugins.r.algorithms
org.hkijena.jipipe.plugins.scene3d.nodes
org.hkijena.jipipe.plugins.tables.nodes.merge
org.hkijena.jipipe.plugins.utils.algorithms
org.hkijena.jipipe.plugins.utils.algorithms.datatable
org.hkijena.jipipe.plugins.utils.algorithms.distribute
org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps
org.hkijena.jipipe.plugins.utils.algorithms.processes

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.api

Methods in org.hkijena.jipipe.api that return types with arguments of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
List<JIPipeMultiIterationStep>	JIPipeDataBatchGenerationResult.getDataBatches()

Methods in org.hkijena.jipipe.api with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
void	JIPipeDataBatchGenerationResult.setDataBatches(JIPipeMultiIterationStep... iterationSteps)

Method parameters in org.hkijena.jipipe.api with type arguments of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
void	JIPipeDataBatchGenerationResult.setDataBatches(List<JIPipeMultiIterationStep> iterationSteps)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.api.nodes.algorithm

Methods in org.hkijena.jipipe.api.nodes.algorithm with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected abstract void	JIPipeIteratingMissingDataGeneratorAlgorithm.runGenerator(JIPipeMultiIterationStep iterationStep, JIPipeInputDataSlot inputSlot, JIPipeOutputDataSlot outputSlot, JIPipeProgressInfo progressInfo) Generates data and puts the output into the specified output slot
protected abstract void	JIPipeMissingDataGeneratorAlgorithm.runGenerator(JIPipeMultiIterationStep iterationStep, JIPipeInputDataSlot inputSlot, JIPipeOutputDataSlot outputSlot, JIPipeProgressInfo progressInfo) Generates data and puts the output into the specified output slot
protected void	JIPipeIteratingMissingDataGeneratorAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Runs code on one data row
protected abstract void	JIPipeSingleIterationAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Runs code on one data row
protected abstract void	JIPipeMergingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Runs code on one data row
protected void	JIPipeMissingDataGeneratorAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeProgressInfo progressInfo) Runs code on one data row
protected void	JIPipeSingleIterationAlgorithm.runPassThrough(JIPipeProgressInfo progressInfo, JIPipeMultiIterationStep iterationStep) A pass-through variant for merging algorithms.
protected void	JIPipeMergingAlgorithm.runPassThrough(JIPipeProgressInfo progressInfo, JIPipeMultiIterationStep iterationStep) A pass-through variant for merging algorithms.

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.api.nodes.iterationstep

Methods in org.hkijena.jipipe.api.nodes.iterationstep that return types with arguments of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
List<JIPipeMultiIterationStep>	JIPipeMultiIterationStepGenerator.build(JIPipeProgressInfo progressInfo)
default List<JIPipeMultiIterationStep>	JIPipeIterationStepAlgorithm.generateDataBatchesDryRun(List<JIPipeInputDataSlot> slots, JIPipeProgressInfo progressInfo) Deprecated. use generateDataBatchesGenerationResult

Methods in org.hkijena.jipipe.api.nodes.iterationstep with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
int	JIPipeMultiIterationStep.compareTo(JIPipeMultiIterationStep o)

Method parameters in org.hkijena.jipipe.api.nodes.iterationstep with type arguments of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
static List<JIPipeSingleIterationStep>	JIPipeMultiIterationStepGenerator.convertMergingToSingleDataBatches(List<JIPipeMultiIterationStep> mergingDataBatches) Builds a single iteration step where each slot only can have one row

Constructors in org.hkijena.jipipe.api.nodes.iterationstep with parameters of type JIPipeMultiIterationStep

Constructor and Description
JIPipeMultiIterationStep(JIPipeMultiIterationStep other) Creates a copy

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.desktop.app.batchassistant

Constructors in org.hkijena.jipipe.desktop.app.batchassistant with parameters of type JIPipeMultiIterationStep

Constructor and Description
JIPipeDesktopDataBatchBrowserUI(JIPipeDesktopWorkbench workbenchUI, JIPipeMultiIterationStep iterationStep)
JIPipeDesktopDataBatchTree(JIPipeDesktopWorkbench workbenchUI, JIPipeMultiIterationStep iterationStep)
JIPipeDesktopDataBatchUI(JIPipeDesktopProjectWorkbench workbenchUI, JIPipeGraphNode node, JIPipeMultiIterationStep batch)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.desktop.app.datatable

Methods in org.hkijena.jipipe.desktop.app.datatable that return types with arguments of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
List<JIPipeMultiIterationStep>	JIPipeDesktopSimpleDataBatchTableUI.getDataBatchList()

Constructor parameters in org.hkijena.jipipe.desktop.app.datatable with type arguments of type JIPipeMultiIterationStep

Constructor and Description
JIPipeDesktopSimpleDataBatchTableModel(JTable table, List<JIPipeMultiIterationStep> iterationStepList, Class<? extends Store> storeClass)
JIPipeDesktopSimpleDataBatchTableUI(List<JIPipeMultiIterationStep> iterationStepList)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.annotation.algorithms

Methods in org.hkijena.jipipe.plugins.annotation.algorithms with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	ConvertToAnnotationTable.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.cellpose.algorithms.cp2

Methods in org.hkijena.jipipe.plugins.cellpose.algorithms.cp2 with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	Cellpose2SegmentationInferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Cellpose2TrainingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.cellpose.algorithms.cp3

Methods in org.hkijena.jipipe.plugins.cellpose.algorithms.cp3 with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	Cellpose3DenoiseInferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Cellpose3SegmentationInferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Cellpose3SegmentationTrainingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Cellpose3DenoiseTrainingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.cellpose.legacy.algorithms

Methods in org.hkijena.jipipe.plugins.cellpose.legacy.algorithms with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
static void	Cellpose1InferenceAlgorithm.extractCellposeOutputs(JIPipeMultiIterationStep iterationStep, JIPipeProgressInfo progressInfo, Path outputRoiOutline, Path outputLabels, Path outputFlows, Path outputProbabilities, Path outputStyles, List<JIPipeTextAnnotation> annotationList, CellposeSegmentationOutputSettings_Old outputParameters) Deprecated.
protected void	Cellpose1TrainingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	LegacyCellpose2InferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	LegacyCellpose2TrainingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	Cellpose1InferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.expressions

Methods in org.hkijena.jipipe.plugins.expressions with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
JIPipeExpressionVariablesMap	JIPipeExpressionVariablesMap.putCommonVariables(JIPipeMultiIterationStep iterationStep)

Constructors in org.hkijena.jipipe.plugins.expressions with parameters of type JIPipeMultiIterationStep

Constructor and Description
JIPipeExpressionVariablesMap(JIPipeMultiIterationStep iterationStep)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.filesystem.algorithms.local

Methods in org.hkijena.jipipe.plugins.filesystem.algorithms.local with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	ExportDataTable.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExportDataTableByParameter.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.forms.algorithms

Methods in org.hkijena.jipipe.plugins.forms.algorithms with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
static void	IteratingFormProcessorAlgorithm.extractRestoredAnnotations(JIPipeMultiIterationStep iterationStep, Map<String,JIPipeTextAnnotation> preFormAnnotations, JIPipeDataSlot inputSlot, int row, List<JIPipeTextAnnotation> annotations) Extracts original annotations into the annotation list

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.forms.datatypes

Methods in org.hkijena.jipipe.plugins.forms.datatypes with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
void	IntegerFormData.loadData(JIPipeMultiIterationStep iterationStep)
void	DoubleFormData.loadData(JIPipeMultiIterationStep iterationStep)
void	StringFormData.loadData(JIPipeMultiIterationStep iterationStep)
abstract void	FormData.loadData(JIPipeMultiIterationStep iterationStep) This method is called by the form processor nodes on loading data into this form.
void	EnumFormData.loadData(JIPipeMultiIterationStep iterationStep)
void	PathFormData.loadData(JIPipeMultiIterationStep iterationStep)
void	GroupHeaderFormData.loadData(JIPipeMultiIterationStep iterationStep)
void	BooleanFormData.loadData(JIPipeMultiIterationStep iterationStep)
void	IntegerFormData.writeData(JIPipeMultiIterationStep iterationStep)
void	DoubleFormData.writeData(JIPipeMultiIterationStep iterationStep)
void	StringFormData.writeData(JIPipeMultiIterationStep iterationStep)
abstract void	FormData.writeData(JIPipeMultiIterationStep iterationStep) This method should write any changes into the iteration step
void	EnumFormData.writeData(JIPipeMultiIterationStep iterationStep)
void	PathFormData.writeData(JIPipeMultiIterationStep iterationStep)
void	GroupHeaderFormData.writeData(JIPipeMultiIterationStep iterationStep)
void	BooleanFormData.writeData(JIPipeMultiIterationStep iterationStep)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.forms.ui

Constructor parameters in org.hkijena.jipipe.plugins.forms.ui with type arguments of type JIPipeMultiIterationStep

Constructor and Description
FormsDialog(JIPipeDesktopWorkbench workbench, List<JIPipeMultiIterationStep> iterationStepList, JIPipeDataSlot originalForms, String tabAnnotation)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.merge

Methods in org.hkijena.jipipe.plugins.ij3d.nodes.roi3d.merge with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	MergeROI3DAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.ijfilaments.nodes.merge

Methods in org.hkijena.jipipe.plugins.ijfilaments.nodes.merge with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	MergeFilamentsAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.ijmultitemplatematching

Methods in org.hkijena.jipipe.plugins.ijmultitemplatematching with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	MultiTemplateMatchingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots

Methods in org.hkijena.jipipe.plugins.ijtrackmate.nodes.spots with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	MergeSpotsNode.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks

Methods in org.hkijena.jipipe.plugins.ijtrackmate.nodes.tracks with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	MergeTracksNode.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.ijweka.nodes

Methods in org.hkijena.jipipe.plugins.ijweka.nodes with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	WekaTrainingMask2DAlgorithm2.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	WekaTrainingLabels2DAlgorithm2.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.ilastik.nodes

Methods in org.hkijena.jipipe.plugins.ilastik.nodes with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	IlastikAutoContextAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	IlastikPredictionMapsObjectClassificationAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	IlastikSegmentationImageObjectClassificationAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	IlastikPixelClassificationAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	IlastikObjectClassificationAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.dimensions with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	Merge2DToHyperstackAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	CreateStackAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	StackToDimensionMergerAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
void	ROIDrawerFormData.loadData(JIPipeMultiIterationStep iterationStep)
void	MaskDrawerFormData.loadData(JIPipeMultiIterationStep iterationStep)
protected void	DrawMaskAlgorithm.runGenerator(JIPipeMultiIterationStep iterationStep, JIPipeInputDataSlot inputSlot, JIPipeOutputDataSlot outputSlot, JIPipeProgressInfo progressInfo)
protected void	DrawROIAlgorithm.runGenerator(JIPipeMultiIterationStep iterationStep, JIPipeInputDataSlot inputSlot, JIPipeOutputDataSlot outputSlot, JIPipeProgressInfo progressInfo)
void	ROIDrawerFormData.writeData(JIPipeMultiIterationStep iterationStep)
void	MaskDrawerFormData.writeData(JIPipeMultiIterationStep iterationStep)

Constructor parameters in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.forms with type arguments of type JIPipeMultiIterationStep

Constructor and Description
MaskDrawerFormData(List<JIPipeMultiIterationStep> iterationSteps, DrawMaskAlgorithm drawMaskAlgorithm)
ROIDrawerFormData(List<JIPipeMultiIterationStep> iterationSteps, DrawROIAlgorithm drawROIAlgorithm)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.generate with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	GenerateMissingTablesAlgorithm.runGenerator(JIPipeMultiIterationStep iterationStep, JIPipeInputDataSlot inputSlot, JIPipeOutputDataSlot outputSlot, JIPipeProgressInfo progressInfo) Deprecated.
protected void	GenerateMissingTablesAlgorithm2.runGenerator(JIPipeMultiIterationStep iterationStep, JIPipeInputDataSlot inputSlot, JIPipeOutputDataSlot outputSlot, JIPipeProgressInfo progressInfo)
protected void	GenerateMissingZeroImage.runGenerator(JIPipeMultiIterationStep iterationStep, JIPipeInputDataSlot inputSlot, JIPipeOutputDataSlot outputSlot, JIPipeProgressInfo progressInfo)
protected void	GenerateMissingImageFromMathExpression2D.runGenerator(JIPipeMultiIterationStep iterationStep, JIPipeInputDataSlot inputSlot, JIPipeOutputDataSlot outputSlot, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.io with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	ExportTableAsXLSXAlgorithm2.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	RunImageJExporterAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	ExportTableAsXLSXAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.math with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	LegacyImageCalculator2DMergingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.montage with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	InputImagesToMontage2.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	InputImagesToMontage.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.assemble with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	AssembleExtractedROIAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.generate with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	GenerateMissingRoiListsAlgorithm.runGenerator(JIPipeMultiIterationStep iterationStep, JIPipeInputDataSlot inputSlot, JIPipeOutputDataSlot outputSlot, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.measure with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	CountROIAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.roi.merge with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	MergeRoiListsOrderedAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeRoiListsUnorderedAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeRoiListsPairwiseOrAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform

Methods in org.hkijena.jipipe.plugins.imagejalgorithms.nodes.transform with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	UnTileImage2DAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TransformEqualCanvasSize2DAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	TransformEqualizeDimensionsToMaxAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.omero.nodes.annotate

Methods in org.hkijena.jipipe.plugins.omero.nodes.annotate with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	AnnotateOMEROScreenReferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateOMEROWellReferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateOMEROPlateReferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateOMEROProjectReferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	AnnotateOMEROImageReferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.omero.nodes.navigate

Methods in org.hkijena.jipipe.plugins.omero.nodes.navigate with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	OMEROListDatasetsAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROListWellsAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROListGroupsAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROListWellImagesAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROListScreensAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROListProjectsAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROListPlatesAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	OMEROListDatasetImagesAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.omnipose.algorithms

Methods in org.hkijena.jipipe.plugins.omnipose.algorithms with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	Omnipose0TrainingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	Omnipose0InferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.omnipose.legacy.algorithms

Methods in org.hkijena.jipipe.plugins.omnipose.legacy.algorithms with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	LegacyOmnipose0TrainingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	LegacyOmnipose0InferenceAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.plots.nodes

Methods in org.hkijena.jipipe.plugins.plots.nodes with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	PlotTablesAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Deprecated.
protected void	PlotTables2Algorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.python

Methods in org.hkijena.jipipe.plugins.python with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
static void	PythonUtils.extractOutputs(JIPipeMultiIterationStep iterationStep, Map<String,Path> outputSlotPaths, List<JIPipeOutputDataSlot> outputSlots, JIPipeTextAnnotationMergeMode annotationMergeStrategy, JIPipeProgressInfo progressInfo)
static Map<String,Path>	PythonUtils.installInputSlots(StringBuilder code, JIPipeMultiIterationStep iterationStep, JIPipeGraphNode node, List<JIPipeInputDataSlot> effectiveInputSlots, Path workDirectory, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.python.algorithms.jython

Methods in org.hkijena.jipipe.plugins.python.algorithms.jython with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	MergingJythonScriptAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.python.algorithms.python

Methods in org.hkijena.jipipe.plugins.python.algorithms.python with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	MergingPythonScriptAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.r.algorithms

Methods in org.hkijena.jipipe.plugins.r.algorithms with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	MergingRScriptAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.scene3d.nodes

Methods in org.hkijena.jipipe.plugins.scene3d.nodes with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	MergeScenesAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.tables.nodes.merge

Methods in org.hkijena.jipipe.plugins.tables.nodes.merge with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	MergeColumnsAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeTableRowsAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeTableColumnsSimpleAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	MergeTableColumnsSupplementMergingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.utils.algorithms

Methods in org.hkijena.jipipe.plugins.utils.algorithms with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	UsePlaceholderForMissingDataAlgorithm.runGenerator(JIPipeMultiIterationStep iterationStep, JIPipeInputDataSlot inputSlot, JIPipeOutputDataSlot outputSlot, JIPipeProgressInfo progressInfo)
protected void	IterationStepSlicer.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.utils.algorithms.datatable

Methods in org.hkijena.jipipe.plugins.utils.algorithms.datatable with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	MergeDataToTableAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.utils.algorithms.distribute

Methods in org.hkijena.jipipe.plugins.utils.algorithms.distribute with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	DistributeDataRandomlyByCountAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)
protected void	DistributeDataRandomlyByPercentageAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps

Methods in org.hkijena.jipipe.plugins.utils.algorithms.iterationsteps with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	MultiIterationStepCheckerAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)

Uses of JIPipeMultiIterationStep in org.hkijena.jipipe.plugins.utils.algorithms.processes

Methods in org.hkijena.jipipe.plugins.utils.algorithms.processes with parameters of type JIPipeMultiIterationStep

Modifier and Type	Method and Description
protected void	RunProcessMergingAlgorithm.runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo)