Uses of Interface
org.hkijena.jipipe.JIPipeJavaPlugin

Packages that use JIPipeJavaPlugin

Package	Description
org.hkijena.jipipe
org.hkijena.jipipe.api.compartments
org.hkijena.jipipe.api.grouping
org.hkijena.jipipe.api.looping
org.hkijena.jipipe.plugins
org.hkijena.jipipe.plugins.annotation
org.hkijena.jipipe.plugins.artifacts
org.hkijena.jipipe.plugins.batchassistant
org.hkijena.jipipe.plugins.cellpose
org.hkijena.jipipe.plugins.clij2
org.hkijena.jipipe.plugins.core
org.hkijena.jipipe.plugins.dataenvironment
org.hkijena.jipipe.plugins.dev
org.hkijena.jipipe.plugins.expressions
org.hkijena.jipipe.plugins.filesystem
org.hkijena.jipipe.plugins.forms
org.hkijena.jipipe.plugins.graphannotation
org.hkijena.jipipe.plugins.ij3d
org.hkijena.jipipe.plugins.ijfilaments
org.hkijena.jipipe.plugins.ijmultitemplatematching
org.hkijena.jipipe.plugins.ijocr
org.hkijena.jipipe.plugins.ijtrackmate
org.hkijena.jipipe.plugins.ijweka
org.hkijena.jipipe.plugins.ilastik
org.hkijena.jipipe.plugins.imagej2
org.hkijena.jipipe.plugins.imagejalgorithms
org.hkijena.jipipe.plugins.imagejdatatypes
org.hkijena.jipipe.plugins.imp
org.hkijena.jipipe.plugins.jsonextensionloader
org.hkijena.jipipe.plugins.multiparameters
org.hkijena.jipipe.plugins.napari
org.hkijena.jipipe.plugins.nodetemplate
org.hkijena.jipipe.plugins.omero
org.hkijena.jipipe.plugins.omnipose
org.hkijena.jipipe.plugins.opencv
org.hkijena.jipipe.plugins.parameters
org.hkijena.jipipe.plugins.pipelinerender
org.hkijena.jipipe.plugins.plots
org.hkijena.jipipe.plugins.processes
org.hkijena.jipipe.plugins.python
org.hkijena.jipipe.plugins.r
org.hkijena.jipipe.plugins.scene3d
org.hkijena.jipipe.plugins.settings
org.hkijena.jipipe.plugins.strings
org.hkijena.jipipe.plugins.tables
org.hkijena.jipipe.plugins.tools
org.hkijena.jipipe.plugins.utils

Uses of JIPipeJavaPlugin in org.hkijena.jipipe

Classes in org.hkijena.jipipe that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	JIPipeDefaultJavaPlugin Default implementation of JIPipeJavaPlugin

Methods in org.hkijena.jipipe that return JIPipeJavaPlugin

Modifier and Type	Method and Description
JIPipeJavaPlugin	JIPipeJavaExtensionInitializationInfo.getInstance()

Methods in org.hkijena.jipipe that return types with arguments of type JIPipeJavaPlugin

Modifier and Type	Method and Description
Set<org.scijava.plugin.PluginInfo<JIPipeJavaPlugin>>	JIPipeRegistryIssues.getErroneousPlugins()
org.scijava.plugin.PluginInfo<JIPipeJavaPlugin>	JIPipeJavaExtensionInitializationInfo.getPluginInfo()

Methods in org.hkijena.jipipe with parameters of type JIPipeJavaPlugin

Modifier and Type	Method and Description
void	JIPipeJavaExtensionInitializationInfo.setInstance(JIPipeJavaPlugin instance)

Method parameters in org.hkijena.jipipe with type arguments of type JIPipeJavaPlugin

Modifier and Type	Method and Description
static JIPipe	JIPipe.createLibNoImageJInstance(List<Class<? extends JIPipeJavaPlugin>> plugins) Create a new JIPipe using initializeLibNoImageJ, which is suitable for using limited functions from within non-ImageJ applications.
void	JIPipe.initializeLibNoImageJ(List<Class<? extends JIPipeJavaPlugin>> plugins) Initializes JIPipe as part of a library with a custom initialization step No settings are loaded and SciJava services are not used.
void	JIPipeRegistryIssues.setErroneousPlugins(Set<org.scijava.plugin.PluginInfo<JIPipeJavaPlugin>> erroneousPlugins)
void	JIPipeJavaExtensionInitializationInfo.setPluginInfo(org.scijava.plugin.PluginInfo<JIPipeJavaPlugin> pluginInfo)

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.api.compartments

Classes in org.hkijena.jipipe.api.compartments that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	JIPipeCompartmentsPlugin Extension that provides compartment management functionality

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.api.grouping

Classes in org.hkijena.jipipe.api.grouping that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	GroupingPlugin Extension for anything that is related to JIPipeGraphWrapperAlgorithm

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.api.looping

Classes in org.hkijena.jipipe.api.looping that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	LoopingPlugin Extension for anything that is related to JIPipeGraphWrapperAlgorithm

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins

Classes in org.hkijena.jipipe.plugins that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	JIPipePrepackagedDefaultJavaPlugin JIPipeDefaultJavaPlugin for internal usage

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.annotation

Classes in org.hkijena.jipipe.plugins.annotation that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	AnnotationsPlugin Extension that provides data types and algorithms to modify data annotations

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.artifacts

Classes in org.hkijena.jipipe.plugins.artifacts that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	ArtifactsPlugin The core extension

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.batchassistant

Classes in org.hkijena.jipipe.plugins.batchassistant that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	BatchAssistantPlugin

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.cellpose

Classes in org.hkijena.jipipe.plugins.cellpose that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	CellposePlugin

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.clij2

Classes in org.hkijena.jipipe.plugins.clij2 that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	CLIJPlugin Integrates CLIJ

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.core

Classes in org.hkijena.jipipe.plugins.core that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	CorePlugin The core extension

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.dataenvironment

Classes in org.hkijena.jipipe.plugins.dataenvironment that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	DataDirectoriesPlugin

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.dev

Classes in org.hkijena.jipipe.plugins.dev that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	DevelopmentPlugin Extension containing some additional tools

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.expressions

Classes in org.hkijena.jipipe.plugins.expressions that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	ExpressionPlugin

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.filesystem

Classes in org.hkijena.jipipe.plugins.filesystem that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	FilesystemPlugin Extension that provides filesystem data types

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.forms

Classes in org.hkijena.jipipe.plugins.forms that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	FormsPlugin Extension that adds forms

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.graphannotation

Classes in org.hkijena.jipipe.plugins.graphannotation that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	GraphAnnotationPlugin

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.ij3d

Classes in org.hkijena.jipipe.plugins.ij3d that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	IJ3DPlugin

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.ijfilaments

Classes in org.hkijena.jipipe.plugins.ijfilaments that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	FilamentsPlugin Extension that adds filaments supports

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.ijmultitemplatematching

Classes in org.hkijena.jipipe.plugins.ijmultitemplatematching that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	MultiTemplateMatchingPlugin Extension that adds ImageJ2 algorithms

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.ijocr

Classes in org.hkijena.jipipe.plugins.ijocr that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	OCRPlugin Extension that adds filaments supports

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.ijtrackmate

Classes in org.hkijena.jipipe.plugins.ijtrackmate that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	TrackMatePlugin

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.ijweka

Classes in org.hkijena.jipipe.plugins.ijweka that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	WekaPlugin

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.ilastik

Classes in org.hkijena.jipipe.plugins.ilastik that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	IlastikPlugin

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.imagej2

Classes in org.hkijena.jipipe.plugins.imagej2 that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	ImageJ2Plugin Extension that adds ImageJ2 algorithms

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.imagejalgorithms

Classes in org.hkijena.jipipe.plugins.imagejalgorithms that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	ImageJAlgorithmsPlugin Extension that adds ImageJ2 algorithms

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.imagejdatatypes

Classes in org.hkijena.jipipe.plugins.imagejdatatypes that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	ImageJDataTypesPlugin Provides ImageJ data types

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.imp

Classes in org.hkijena.jipipe.plugins.imp that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	ImpPlugin Python nodes

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.jsonextensionloader

Classes in org.hkijena.jipipe.plugins.jsonextensionloader that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	JsonExtensionLoaderPlugin Extension that loads JIPipeJsonPlugin

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.multiparameters

Classes in org.hkijena.jipipe.plugins.multiparameters that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	MultiParameterAlgorithmsPlugin Extension that provides capabilities to run multiple parameters
class	MultiParametersPlugin Extension that provides capabilities to run multiple parameters

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.napari

Classes in org.hkijena.jipipe.plugins.napari that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	NapariPlugin

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.nodetemplate

Classes in org.hkijena.jipipe.plugins.nodetemplate that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	NodeTemplateBoxToolPlugin

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.omero

Classes in org.hkijena.jipipe.plugins.omero that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	OMEROPlugin Provides data types dor handling strings

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.omnipose

Classes in org.hkijena.jipipe.plugins.omnipose that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	OmniposePlugin

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.opencv

Classes in org.hkijena.jipipe.plugins.opencv that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	OpenCvPlugin Python nodes

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.parameters

Classes in org.hkijena.jipipe.plugins.parameters that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	StandardParametersPlugin Provides some standard parameters

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.pipelinerender

Classes in org.hkijena.jipipe.plugins.pipelinerender that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	PipelineRenderPlugin Extension containing some additional tools

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.plots

Classes in org.hkijena.jipipe.plugins.plots that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	PlotsPlugin Provides a standard selection of plots

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.processes

Classes in org.hkijena.jipipe.plugins.processes that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	ProcessesPlugin

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.python

Classes in org.hkijena.jipipe.plugins.python that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	CorePythonPlugin Python nodes
class	PythonPlugin Python nodes

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.r

Classes in org.hkijena.jipipe.plugins.r that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	RPlugin

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.scene3d

Classes in org.hkijena.jipipe.plugins.scene3d that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	Scene3DPlugin

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.settings

Classes in org.hkijena.jipipe.plugins.settings that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	StandardSettingsPlugin Extension that provides all JIPipe included settings sheets

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.strings

Classes in org.hkijena.jipipe.plugins.strings that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	StringsPlugin Provides data types dor handling strings

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.tables

Classes in org.hkijena.jipipe.plugins.tables that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	TablesPlugin Standard set of table operations

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.tools

Classes in org.hkijena.jipipe.plugins.tools that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	ToolsPlugin Extension containing some additional tools

Uses of JIPipeJavaPlugin in org.hkijena.jipipe.plugins.utils

Classes in org.hkijena.jipipe.plugins.utils that implement JIPipeJavaPlugin

Modifier and Type	Class and Description
class	UtilitiesPlugin