org.hkijena.jipipe.extensions.imageviewer.plugins

Class ImageViewerPanelPlugin

java.lang.Object

org.hkijena.jipipe.extensions.imageviewer.plugins.ImageViewerPanelPlugin

All Implemented Interfaces:

JIPipeWorkbenchAccess

Direct Known Subclasses:

AnnotationInfoPlugin, GeneralImageViewerPanelPlugin, MaskDrawerPlugin, MaskDrawerTool, ROIManagerPlugin, SpotsManagerPlugin, TracksManagerPlugin

public abstract class ImageViewerPanelPlugin
extends Object
implements JIPipeWorkbenchAccess

Constructor Summary

Constructors

Constructor and Description
ImageViewerPanelPlugin(ImageViewerPanel viewerPanel)

Method Summary

Modifier and Type	Method and Description
void	beforeDraw(int c, int z, int t) Called before draw is called
void	createPalettePanel(FormPanel formPanel) Called when the form panel should be recreated
ij.process.ImageProcessor	draw(int c, int z, int t, ij.process.ImageProcessor processor) Draws the image in the processor
abstract String	getCategory() The tool panel category where this tool is shown
abstract Icon	getCategoryIcon() The icon for the category if a new one must be created
ij.ImagePlus	getCurrentImage()
ij.process.ImageProcessor	getCurrentSlice()
ImageSliceIndex	getCurrentSlicePosition()
ImageViewerPanel	getViewerPanel()
JIPipeWorkbench	getWorkbench()
void	onImageChanged() Called when the current image is changed
void	onSliceChanged(boolean deferUploadSlice) Called when the current slice is changed
void	postprocessDraw(Graphics2D graphics2D, Rectangle renderArea, ImageSliceIndex sliceIndex) Called after the image has been drawn after the image has been drawn
void	postprocessDrawForExport(BufferedImage image, ImageSliceIndex sliceIndex, double magnification) Called while exporting the image slice.
void	uploadSliceToCanvas()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ImageViewerPanelPlugin

public ImageViewerPanelPlugin(ImageViewerPanel viewerPanel)

Method Detail

getViewerPanel

public ImageViewerPanel getViewerPanel()

uploadSliceToCanvas

public void uploadSliceToCanvas()

getCurrentSlicePosition

public ImageSliceIndex getCurrentSlicePosition()

getCurrentImage

public ij.ImagePlus getCurrentImage()

getCurrentSlice

public ij.process.ImageProcessor getCurrentSlice()

getWorkbench

public JIPipeWorkbench getWorkbench()

Specified by:

getWorkbench in interface JIPipeWorkbenchAccess

onImageChanged

public void onImageChanged()

Called when the current image is changed

createPalettePanel

public void createPalettePanel(FormPanel formPanel)

Called when the form panel should be recreated

Parameters:

formPanel - the form panel

draw

public ij.process.ImageProcessor draw(int c,
                                      int z,
                                      int t,
                                      ij.process.ImageProcessor processor)

Draws the image in the processor

Parameters:

c - c position

z - z position

t - t position

processor - the processor

Returns:

the modified processor

onSliceChanged

public void onSliceChanged(boolean deferUploadSlice)

Called when the current slice is changed

Parameters:

deferUploadSlice - if true, uploading the slice to the canvas should be deferred

beforeDraw

public void beforeDraw(int c,
                       int z,
                       int t)

Called before draw is called

Parameters:

c - c position

z - z position

t - t position

postprocessDraw

public void postprocessDraw(Graphics2D graphics2D,
                            Rectangle renderArea,
                            ImageSliceIndex sliceIndex)

Called after the image has been drawn after the image has been drawn

Parameters:

graphics2D - the graphics

renderArea - the render area

sliceIndex - the index of the slice

postprocessDrawForExport

public void postprocessDrawForExport(BufferedImage image,
                                     ImageSliceIndex sliceIndex,
                                     double magnification)

Called while exporting the image slice. Use this to export items handled by postprocessDraw

Parameters:

image - the image

sliceIndex - the slice

magnification - the magnification

getCategory

public abstract String getCategory()

The tool panel category where this tool is shown

Returns:

the category

getCategoryIcon

public abstract Icon getCategoryIcon()

The icon for the category if a new one must be created

Returns:

the icon