Constant Field Values

Contents

• org.hkijena.*

org.hkijena.*

org.hkijena.jipipe.api.JIPipeNodeTemplate

Modifier and Type	Constant Field	Value
public static final String	SOURCE_EXTENSION	"Extension"
public static final String	SOURCE_USER	"User"

org.hkijena.jipipe.api.JIPipeProject

Modifier and Type	Constant Field	Value
public static final int	CURRENT_PROJECT_FORMAT_VERSION	1

org.hkijena.jipipe.api.compat.DataTableImageJDataExporter

Modifier and Type	Constant Field	Value
public static final String	ID	"default"

org.hkijena.jipipe.api.compat.DataTableImageJDataImporter

Modifier and Type	Constant Field	Value
public static final String	ID	"default"

org.hkijena.jipipe.api.data.JIPipeDataSlot

Modifier and Type	Constant Field	Value
public static final String	LOCATION_KEY_NODE_DISPLAY_NAME	"jipipe:node:display-name"
public static final String	LOCATION_KEY_NODE_NAME	"jipipe:node:name"
public static final String	LOCATION_KEY_SLOT_DISPLAY_NAME	"jipipe:slot:display-name"
public static final String	LOCATION_KEY_SLOT_IO	"jipipe:slot:io"
public static final String	LOCATION_KEY_SLOT_NAME	"jipipe:slot:name"

org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

Modifier and Type	Constant Field	Value
public static final String	SLOT_PARAMETERS	"{Parameters}"

org.hkijena.jipipe.api.nodes.database.WeightedTokens

Modifier and Type	Constant Field	Value
public static final int	WEIGHT_DESCRIPTION	1
public static final int	WEIGHT_MENU	2
public static final int	WEIGHT_NAME	3

org.hkijena.jipipe.api.parameters.JIPipeParameterTree

Modifier and Type	Constant Field	Value
public static final int	FORCE_REFLECTION	2
public static final int	IGNORE_CUSTOM	4
public static final int	IGNORE_REFLECTION	1
public static final int	NONE	0

org.hkijena.jipipe.api.run.JIPipeGraphRunDataFlowGraph

Modifier and Type	Constant Field	Value
public static final int	DATA_FLOW_WEIGHT_HEAVY	1
public static final int	DATA_FLOW_WEIGHT_INTERNAL	0
public static final int	DATA_FLOW_WEIGHT_LIGHT	4

org.hkijena.jipipe.extensions.forms.algorithms.IteratingFormProcessorAlgorithm

Modifier and Type	Constant Field	Value
public static final String	SLOT_FORMS	"Forms"

org.hkijena.jipipe.extensions.ij3d.IJ3DPlugin

Modifier and Type	Constant Field	Value
public static final String	RESOURCE_BASE_PATH	"/org/hkijena/jipipe/extensions/ij3d"

org.hkijena.jipipe.extensions.ijweka.WekaPlugin

Modifier and Type	Constant Field	Value
public static final String	RESOURCE_BASE_PATH	"/org/hkijena/jipipe/extensions/ijweka"

org.hkijena.jipipe.extensions.ilastik.nodes.IlastikAutoContextAlgorithm

Modifier and Type	Constant Field	Value
public static final String	PROJECT_TYPE	"PixelClassification01"

org.hkijena.jipipe.extensions.ilastik.nodes.IlastikPixelClassificationAlgorithm

Modifier and Type	Constant Field	Value
public static final String	PROJECT_TYPE	"PixelClassification"

org.hkijena.jipipe.extensions.ilastik.utils.ImgUtils

Modifier and Type	Constant Field	Value
public static final String	DEFAULT_STRING_AXES	"xyczt"

org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.ImageStatisticsSetParameter

Modifier and Type	Constant Field	Value
public static final String	ALL_DESCRIPTIONS	"<p><strong>Area</strong><br/><br/>Measures ROI areas. Area of selection in square pixels. Area is in calibrated units if available. They are stored as \'Area\'.</p><br/><p><strong>Area fraction</strong><br/><br/>The percentage of non-zero pixels. Values are stored in \'%Area\'</p><br/><p><strong>Bounding rectangle</strong><br/><br/>The smallest rectangle enclosing the selection. Uses the headings BX, BY, Width and Height, where BX and BY are the coordinates of the upper left corner of the rectangle.</p><br/><p><strong>Center of mass</strong><br/><br/>Measures the brightness-weighted average of the x and y coordinates all pixels in the image or selection. They are stored into \'XM\' and \'YM\' respectively. These coordinates are the first order spatial moments.</p><br/><p><strong>Centroid</strong><br/><br/>The center point of the selection. This is the average of the x and y coordinates of all of the pixels in the image or selection. Values are stored in \'X\' and \'Y\' respectively.</p><br/><p><strong>Feret\'s diameter</strong><br/><br/>The longest distance between any two points along the selection boundary, also known as maximum caliper. Uses the Feret heading. FeretAngle (0-180 degrees) is the angle between the Feret\'s diameter and a line parallel to the x-axis of the image. MinFeret is the minimum caliper diameter. The starting coordinates of the Feret\'s diameter (FeretX and FeretY) are also generated.</p><br/><p><strong>Fit ellipse</strong><br/><br/>Fit an ellipse to the selection. Uses the headings Major, Minor and Angle. Major and Minor are the primary and seconday axis of the best fitting ellipse. Angle (0-180 degrees) is the angle between the primary axis and a line parallel to the x-axis of the image. The coordinates of the center of the ellipse are displayed as X and Y if Centroid is checked. Note that ImageJ cannot calculate the major and minor axis lengths if Pixel Aspect Ratio is not 1.0.</p><br/><p><strong>Integrated density</strong><br/><br/>Calculates and displays two values: \'IntDen\' (the product of Area and Mean Gray Value) and \'RawIntDen\' (the sum of the values of the pixels in the image or selection).</p><br/><p><strong>Min & max pixel values</strong><br/><br/>Measures the minimum and maximum greyscale pixel values. They are stored into \'Min\' and \'Max\' respectively.</p><br/><p><strong>Perimeter</strong><br/><br/>The length of the outside boundary of the selection. Values are stored in \'Perim.\'</p><br/><p><strong>Pixel values kurtosis</strong><br/><br/>The fourth order moment about the greyscale pixel value mean. Values are stored in \'Kurt\'</p><br/><p><strong>Pixel values mean</strong><br/><br/>Mean of grayscale pixel values. Values are stored in \'Mean\'.</p><br/><p><strong>Pixel values median</strong><br/><br/>The median value of the pixels in the image or selection. Values are stored in \'Median\'</p><br/><p><strong>Pixel values modal</strong><br/><br/>Most frequently occurring gray value within the selection. Values are stored in \'Mode\'.</p><br/><p><strong>Pixel values skewness</strong><br/><br/>The third order moment about the mean of grayscale pixel values. Values are stored in \'Skew\'.</p><br/><p><strong>Pixel values standard deviation</strong><br/><br/>Measures the standard deviation of greyscale pixel values. They are stored as \'StdDev\'.</p><br/><p><strong>Shape descriptors</strong><br/><br/>Measures the following shape descriptors:<br/><ul><li>Circ. (circularity): 4\u03c0*area/perimeter^2. A value of 1.0 indicates a perfect circle. As the value approaches 0.0, it indicates an increasingly elongated shape. Values may not be valid for very small particles.</li><li>AR (aspect ratio): major_axis/minor_axis. To show major and minor axis enable \'Fit ellipse\'</li><li>Round (roundness): 4*area/(\u03c0*major_axis^2), or the inverse of the aspect ratio.</li><li>Solidity: area/convex area.</li></ul></p><br/><p><strong>Stack position</strong><br/><br/>The current position (channel, slice and frame) in the stack or hyperstack. Uses the headings \'Ch\', \'Slice\' and \'Frame\'. Please note that JIPipe algorithms sometimes handle stacks differently compared to their ImageJ equivalents. We recommend to not rely on this measurement.</p><br/>"

org.hkijena.jipipe.extensions.omero.OMEROSettings

Modifier and Type	Constant Field	Value
public static final String	ID	"org.hkijena.jipipe:omero"

org.hkijena.jipipe.extensions.parameters.library.jipipe.PluginCategoriesEnumParameter

Modifier and Type	Constant Field	Value
public static final String	CATEGORY_3D	"3D"
public static final String	CATEGORY_ANALYSIS	"Analysis"
public static final String	CATEGORY_ANNOTATION	"Annotation"
public static final String	CATEGORY_AUTOMATION	"Automation"
public static final String	CATEGORY_BENCHMARK	"Benchmark"
public static final String	CATEGORY_BINARY	"Binary"
public static final String	CATEGORY_CELLPROFILER	"CellProfiler"
public static final String	CATEGORY_CLASSIFICATION	"Classification"
public static final String	CATEGORY_COLOCALIZATION	"Colocalization"
public static final String	CATEGORY_COLOR_PROCESSING	"Color Processing"
public static final String	CATEGORY_COMPLEXITY	"Complexity"
public static final String	CATEGORY_COOKBOOK	"Cookbook"
public static final String	CATEGORY_DATA_PROCESSING	"Data processing"
public static final String	CATEGORY_DECONVOLUTION	"Deconvolution"
public static final String	CATEGORY_DEEP_LEARNING	"Deep-Learning"
public static final String	CATEGORY_DENOISING	"Denoising"
public static final String	CATEGORY_DEVELOPMENT	"Development"
public static final String	CATEGORY_DIGITAL_VOLUME_FLATTENING	"Digital Volume Flattening"
public static final String	CATEGORY_DIGITAL_VOLUME_UNROLLING	"Digital Volume Unrolling"
public static final String	CATEGORY_ENTROPY	"Entropy"
public static final String	CATEGORY_EXAMPLE_DATA	"Example Data"
public static final String	CATEGORY_FEATURE_EXTRACTION	"Feature Extraction"
public static final String	CATEGORY_FIJI	"Fiji"
public static final String	CATEGORY_FILTERING	"Filtering"
public static final String	CATEGORY_FRACTAL_DIMENSION	"Fractal dimension"
public static final String	CATEGORY_GPU	"GPU"
public static final String	CATEGORY_GUT	"Gut"
public static final String	CATEGORY_HELP	"Help"
public static final String	CATEGORY_IMAGE_ANALYSIS	"Image analysis"
public static final String	CATEGORY_IMAGE_ANNOTATION	"Image Annotation"
public static final String	CATEGORY_IMAGE_SCIENCE	"ImageScience"
public static final String	CATEGORY_IMAGEJ2	"ImageJ2"
public static final String	CATEGORY_IMGLIB	"ImgLib"
public static final String	CATEGORY_IMPORT_EXPORT	"Import-Export"
public static final String	CATEGORY_INTEGRAL_IMAGE	"Integral Image"
public static final String	CATEGORY_INTERACTIVE	"Interactive"
public static final String	CATEGORY_LIFETIME	"Lifetime"
public static final String	CATEGORY_LISP	"Lisp"
public static final String	CATEGORY_MACHINE_LEARNING	"Machine Learning"
public static final String	CATEGORY_MATHEMATICAL_MORPHOLOGY	"Mathematical Morphology"
public static final String	CATEGORY_MATLAB	"MATLAB"
public static final String	CATEGORY_MICROSCOPY	"Microscopy"
public static final String	CATEGORY_MICROTUBULES	"Microtubules"
public static final String	CATEGORY_MONTAGE	"Montage"
public static final String	CATEGORY_NEUROANATOMY	"Neuroanatomy"
public static final String	CATEGORY_NEURON	"Neuron"
public static final String	CATEGORY_NOISE	"Noise"
public static final String	CATEGORY_OBJECT_DETECTION	"Object Detection"
public static final String	CATEGORY_OME	"OME"
public static final String	CATEGORY_OPS	"Ops"
public static final String	CATEGORY_OPTIC_FLOW	"Optic Flow"
public static final String	CATEGORY_PARTICLE_ANALYSIS	"Particle Analysis"
public static final String	CATEGORY_PATTERN_RECOGNITION	"Pattern Recognition"
public static final String	CATEGORY_PERFUSION	"Perfusion"
public static final String	CATEGORY_PHOTOGRAMMETRY	"Photogrammetry"
public static final String	CATEGORY_PHOTOGRAPHY	"Photography"
public static final String	CATEGORY_PLOTTING	"Plotting"
public static final String	CATEGORY_PROJECTION	"Projection"
public static final String	CATEGORY_REGISTRATION	"Registration"
public static final String	CATEGORY_SCIJAVA	"SciJava"
public static final String	CATEGORY_SCRIPTING	"Scripting"
public static final String	CATEGORY_SEGMENTATION	"Segmentation"
public static final String	CATEGORY_SKELETON	"Skeleton"
public static final String	CATEGORY_SKELETONIZATION	"Skeletonization"
public static final String	CATEGORY_STACKS	"Stacks"
public static final String	CATEGORY_STATISTICS	"Statistics"
public static final String	CATEGORY_STITCHING	"Stitching"
public static final String	CATEGORY_SUPER_RESOLUTION	"Super-resolution"
public static final String	CATEGORY_TIME_SIGNAL_ANALYSIS	"Time signal analysis"
public static final String	CATEGORY_TISSUE	"Tissue"
public static final String	CATEGORY_TRACKEM2	"TrakEM2"
public static final String	CATEGORY_TRACKING	"Tracking"
public static final String	CATEGORY_TRANSFORM	"Transform"
public static final String	CATEGORY_TUTORIAL	"Tutorial"
public static final String	CATEGORY_TUTORIALS	"Tutorials"
public static final String	CATEGORY_UNCATEGORIZED	"Uncategorized"
public static final String	CATEGORY_USER_INTERFACE	"User Interface"
public static final String	CATEGORY_VISUALIZATION	"Visualization"

org.hkijena.jipipe.extensions.parameters.library.quantities.Quantity

Modifier and Type	Constant Field	Value
public static final String	UNIT_NO_UNIT	""
public static final String	UNIT_PIXELS	"pixels"

org.hkijena.jipipe.extensions.parameters.library.roi.FixedMargin

Modifier and Type	Constant Field	Value
public static final int	PARAM_BOTTOM	8
public static final int	PARAM_HEIGHT	32
public static final int	PARAM_LEFT	1
public static final int	PARAM_RIGHT	4
public static final int	PARAM_TOP	2
public static final int	PARAM_WIDTH	16

org.hkijena.jipipe.extensions.parameters.library.roi.Margin

Modifier and Type	Constant Field	Value
public static final int	PARAM_BOTTOM	8
public static final int	PARAM_HEIGHT	32
public static final int	PARAM_LEFT	1
public static final int	PARAM_RIGHT	4
public static final int	PARAM_TOP	2
public static final int	PARAM_WIDTH	16

org.hkijena.jipipe.extensions.python.PythonEnvironment

Modifier and Type	Constant Field	Value
public static final String	ENVIRONMENT_ID	"python"

org.hkijena.jipipe.extensions.python.adapter.JIPipePythonAdapterLibraryEnvironment

Modifier and Type	Constant Field	Value
public static final String	ENVIRONMENT_ID	"jipipe-python-adapter-library"

org.hkijena.jipipe.extensions.r.REnvironment

Modifier and Type	Constant Field	Value
public static final String	ENVIRONMENT_ID	"r"

org.hkijena.jipipe.extensions.r.ui.RTokenMaker

Modifier and Type	Constant Field	Value
public static final int	EOL_COMMENT	2
public static final int	STRING	1
public static final int	YYEOF	-1
public static final int	YYINITIAL	0

org.hkijena.jipipe.extensions.settings.BackupSettings

Modifier and Type	Constant Field	Value
public static final String	ID	"backups"

org.hkijena.jipipe.extensions.settings.DataExporterSettings

Modifier and Type	Constant Field	Value
public static final String	ID	"data-exporter"

org.hkijena.jipipe.extensions.settings.DefaultCacheDisplaySettings

Modifier and Type	Constant Field	Value
public static final String	ID	"default-cache-displays"

org.hkijena.jipipe.extensions.settings.DefaultResultImporterSettings

Modifier and Type	Constant Field	Value
public static final String	ID	"default-result-importers"

org.hkijena.jipipe.extensions.settings.DownloadSettings

Modifier and Type	Constant Field	Value
public static final String	ID	"downloads"

org.hkijena.jipipe.extensions.settings.ExtensionSettings

Modifier and Type	Constant Field	Value
public static final String	ID	"extensions"

org.hkijena.jipipe.extensions.settings.RuntimeSettings

Modifier and Type	Constant Field	Value
public static final String	ID	"runtime"

org.hkijena.jipipe.ui.JIPipeProjectWorkbench

Modifier and Type	Constant Field	Value
public static final String	TAB_COMPARTMENT_EDITOR	"COMPARTMENT_EDITOR"
public static final String	TAB_INTRODUCTION	"INTRODUCTION"
public static final String	TAB_LICENSE	"LICENSE"
public static final String	TAB_LOG	"LOG"
public static final String	TAB_NOTIFICATIONS	"NOTIFICATIONS"
public static final String	TAB_PLUGIN_MANAGER	"PLUGIN_MANAGER"
public static final String	TAB_PLUGIN_VALIDITY_CHECK	"PLUGIN_VALIDITY_CHECK"
public static final String	TAB_PROJECT_OVERVIEW	"PROJECT_OVERVIEW"
public static final String	TAB_VALIDITY_CHECK	"VALIDITY_CHECK"

org.hkijena.jipipe.ui.cache.JIPipeAlgorithmCacheBrowserOutputSelectorUI

Modifier and Type	Constant Field	Value
public static final String	SELECT_ALL_OUTPUTS	""

org.hkijena.jipipe.ui.compat.RunSingleAlgorithmWindow

Modifier and Type	Constant Field	Value
public static final String	HELP_URL	"https://www.jipipe.org/documentation/imagej-integration/#running-a-single-node"

org.hkijena.jipipe.ui.components.FlexContentPanel

Modifier and Type	Constant Field	Value
public static final int	NONE	0
public static final int	WITH_PIN_TOOLBAR	4
public static final int	WITH_RIBBON	1
public static final int	WITH_SIDEBAR	8
public static final int	WITH_TOOLBAR	2

org.hkijena.jipipe.ui.components.FormPanel

Modifier and Type	Constant Field	Value
public static final int	DOCUMENTATION_BELOW	4
public static final int	DOCUMENTATION_NO_UI	16
public static final int	NONE	0
public static final int	TABBED_DOCUMENTATION	8
public static final int	TRANSPARENT_BACKGROUND	32
public static final int	WITH_DOCUMENTATION	1
public static final int	WITH_SCROLLING	2

org.hkijena.jipipe.ui.components.html.HTMLEditor

Modifier and Type	Constant Field	Value
public static final int	NONE	0
public static final int	WITH_DIALOG_EDITOR_BUTTON	2
public static final int	WITH_SCROLL_BAR	1

org.hkijena.jipipe.ui.components.icons.NewThrobberIcon

Modifier and Type	Constant Field	Value
public static final int	ANIMATION_DELAY	80

org.hkijena.jipipe.ui.documentation.DownloadOfflineManualRun

Modifier and Type	Constant Field	Value
public static final String	DOWNLOAD_URL	"https://github.com/applied-systems-biology/jipipe/releases/download/current/jipipe_offline_documentation.zip"

org.hkijena.jipipe.ui.extensions.ExtensionListPanel

Modifier and Type	Constant Field	Value
public static final int	MIN_VISIBLE_ITEMS	30

org.hkijena.jipipe.ui.grapheditor.general.JIPipeGraphEditorUI

Modifier and Type	Constant Field	Value
public static final int	FLAGS_NONE	0
public static final int	FLAGS_SPLIT_PANE_RATIO_1_1	2
public static final int	FLAGS_SPLIT_PANE_SWITCH_CONTENT	4
public static final int	FLAGS_SPLIT_PANE_VERTICAL	1

org.hkijena.jipipe.ui.grapheditor.nodefinder.NodeFinderDatasetListCellRenderer

Modifier and Type	Constant Field	Value
public static final int	CELL_HEIGHT	100

org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI

Modifier and Type	Constant Field	Value
public static final int	CONTROL_STYLE_CHECKBOX	4
public static final int	CONTROL_STYLE_LIST	2
public static final int	CONTROL_STYLE_PANEL	1

org.hkijena.jipipe.ui.parameters.ParameterPanel

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_DIALOG_FLAGS	515
public static final int	FORCE_TRAVERSE	256
public static final int	NO_EMPTY_GROUP_HEADERS	128
public static final int	NO_GROUP_HEADERS	64
public static final int	WITH_SEARCH_BAR	512
public static final int	WITHOUT_COLLAPSE	2048
public static final int	WITHOUT_LABEL_SEPARATION	1024

org.hkijena.jipipe.ui.settings.JIPipeProjectInfoParameters

Modifier and Type	Constant Field	Value
public static final String	METADATA_KEY	"org.hkijena.jipipe:pipeline-parameters"

org.hkijena.jipipe.utils.AutoResizeSplitPane

Modifier and Type	Constant Field	Value
public static final int	LEFT_RIGHT	1
public static final double	RATIO_1_TO_1	0.5
public static final double	RATIO_1_TO_3	0.33
public static final double	RATIO_3_TO_1	0.66
public static final int	TOP_BOTTOM	0

org.hkijena.jipipe.utils.ColorUtils

Modifier and Type	Constant Field	Value
public static final String	PARSE_COLOR_DESCRIPTION	"The color can be a common color name (e.g. \'red\'), a hex color (e.g. \'#ff00ff\'), or an RGB color (e.g. \'0,128,255\')."

org.hkijena.jipipe.utils.ResourceUtils

Modifier and Type	Constant Field	Value
public static final String	RESOURCE_BASE_PATH	"/org/hkijena/jipipe"