JIPipeParameterCollection (jipipe 1.80.0-SNAPSHOT API)

All Known Subinterfaces:

ExternalEnvironmentSettings, JIPipeAdaptiveParametersAlgorithm, JIPipeCustomParameterCollection, JIPipeDataBatchGenerationSettings

All Known Implementing Classes:

AbstractJIPipeParameterCollection, AbstractTextBoxAnnotationGraphNode, AbstractTextBoxAnnotationGraphNode.TextLocationParameters, AbstractTextBoxAnnotationGraphNode.TextRenderParameters, AddAnnotationColumnsAlgorithm, AddBorder2DAlgorithm, AddMissingRowsInSeriesAlgorithm, AddNoise2DAlgorithm, AddParameterDialog.Settings, AddRoiListsAlgorithm, AddSaltAndPepperNoise2DAlgorithm, AnalyzeSkeleton2D3DAlgorithm, AnalyzeSkeleton2D3DAlgorithm.OutputParameters, AnnotateByExpression, AnnotateByImageStatisticsExpressionAlgorithm, AnnotateByTablePropertiesAlgorithm, AnnotateDataWithTableValues, AnnotateDataWithTableValues.AnnotationSettings, AnnotateWithAnnotationTable, AnnotateWithData, AnnotateWithDataString, AnnotateWithDataTableProperties, AnnotateWithOverlapMeasureLabelsAlgorithm, AnnotateWithPathProperties, AnnotateWithSourceSlot, AnnotationsToParametersAlgorithm, AnnotationTableFromFile, AnnotationTableToPaths, AnnotationToPath, AppendRectangularRoiAlgorithm, ApplyColorMathExpression2DExpression, ApplyDisplayContrastAlgorithm, ApplyDistanceTransform2DAlgorithm, ApplyExpressionPerRowAlgorithm, ApplyExpressionToColumnsAlgorithm, ApplyLUTAlgorithm, ApplyMath2DAlgorithm, ApplyMathExpression2DAlgorithm, ApplyTransform2DAlgorithm, ApplyVectorMathExpression2DAlgorithm, ArrangeChannelsAlgorithm, ArrowAnnotationGraphNode, AssembleExtractedROIAlgorithm, AutoSaveSettings, AutoThreshold2DAlgorithm, AverageKeyValueThresholdStatisticsGenerator, BarBoxAndWhiskerCategoryPlotData, BarCategoryPlotData, BarStatisticalCategoryPlotData, BasicMinicondaEnvPythonInstaller.Configuration, BasicPortableEnvPythonInstaller.Configuration, BernsenLocalAutoThreshold2DAlgorithm, BinarizeAlgorithm, BioFormatsExporter, BioFormatsImporter, BitwiseLogicalOperationAlgorithm, BlendImagesAlgorithm, BooleanFormData, BooleanFormGeneratorAlgorithm, BorderImageJ2OutOfBoundsFactoryData, BoxAndWhiskerCategoryPlotData, BoxFilter2DAlgorithm, BoxFilter3DAlgorithm, BrightSpotsSegmentation2DAlgorithm, ByteConstantValueImageJ2OutOfBoundsFactoryData, CannyEdgeDetectorAlgorithm, CanvasEqualizer, CategoryPlotData, CellposeAlgorithm, CellposeAlgorithm_Old, CellposeChannelSettings, CellposeGPUSettings, CellposeSegmentationEnhancementSettings_Old, CellposeSegmentationModelSettings_Old, CellposeSegmentationOutputSettings, CellposeSegmentationOutputSettings_Old, CellposeSegmentationPerformanceSettings_Old, CellposeSegmentationThresholdSettings, CellposeSegmentationThresholdSettings_Old, CellposeSegmentationTweaksSettings, CellposeSettings, CellposeTrainingAlgorithm, CellposeTrainingAlgorithm_Old, CellposeTrainingTweaksSettings, CenteredRectangleImageJ2ShapeData, ChamferDistanceMap2DAlgorithm, ChamferDistanceMap3DAlgorithm, ChangeFilamentVertexPropertiesAlgorithm, ChangeImageMetadataFromExpressionsAlgorithm, ChangeRoi3DPropertiesAlgorithm, ChangeRoi3DPropertiesFromExpressionsAlgorithm, ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry, ChangeRoiNameFromExpressionsAndMeasurementsAlgorithm, ChangeRoiPropertiesAlgorithm, ChangeRoiPropertiesFromAnnotationsAlgorithm, ChangeRoiPropertiesFromExpressionsAlgorithm, CircularHoughSegmentation2DAlgorithm, CLAHEContrastEnhancer, ClassicWatershedSegmentationAlgorithm, Clij2ExecuteKernelIterating, Clij2ExecuteKernelSimpleIterating, Clij2PullAlgorithm, Clij2PushAlgorithm, CLIJCommandNode, CLIJSettings, CLIJSettings.ContrastEnhancerSettings, Coloc2Node, Coloc2Node.Settings, ColorRoi3DByNameAlgorithm, ColorRoi3DByStatisticsAlgorithm, ColorRoiByNameAlgorithm, ColorRoiByStatisticsAlgorithm, ColorSpaceConverterAlgorithm, ColorThresholdExpression2D, ColorToGreyscaleExpression2D, ColumnsToAnnotationsAlgorithm, ColumnToNumericAlgorithm, ColumnToStringAlgorithm, CombineChannelsToRGBAlgorithm, ConcatenateByParameter, ConcatenatePaths, ConditionalInverterAlgorithm, ConnectedComponentsLabeling2DAlgorithm, ConnectedComponentsLabeling3DAlgorithm, ConstantSpotSegmentation3DAlgorithm, ContrastLocalAutoThreshold2DAlgorithm, ConvertAnnotationTableToAnnotatedTables, ConvertColumnsAlgorithm, ConvertDataToOutputPath, ConverterAlgorithm, ConvertFilamentsTo3DMeshAlgorithm, ConvertFilamentsToLabelsAlgorithm, ConvertFilamentsToMaskAlgorithm, ConvertFilamentsToRGBAlgorithm, ConvertFilamentsToRoi3DAlgorithm, ConvertFilamentsToRoiAlgorithm, ConvertImageAlgorithm, ConvertImageTo16BitAlgorithm, ConvertImageTo32BitAlgorithm, ConvertImageTo8BitAlgorithm, ConvertImageToHSBAlgorithm, ConvertImageToLABAlgorithm, ConvertImageToRGBAlgorithm, ConvertParametersToTableAlgorithm, ConvertSpotsToRoiNode, ConvertToAnnotationTable, ConvertTracksToRoiNode, ConvexifyAlgorithm, ConvolveByImage2DAlgorithm, ConvolveByParameter2DAlgorithm, CopyPath, CopyPhysicalDimensionsBetweenImagesAlgorithm, CountROIAlgorithm, CreateDirectory, CreateIJ2OutOfBoundsFactoryAlgorithm, CreateIJ2ShapeAlgorithm, CreateLineMeshAlgorithm, CreateSphereMeshAlgorithm, CreateSpotDetectorNode, CreateSpotTrackerNode, CreateStackAlgorithm, CropLabelsAlgorithm, CropRoiListAlgorithm, CropToRoiAlgorithm, CustomAutoThreshold2D16UAlgorithm, CustomAutoThreshold2D16Uv2Algorithm, CustomAutoThreshold2D16Uv2Algorithm.ThresholdParameters, CustomAutoThreshold2D32FAlgorithm, CustomAutoThreshold2D32Fv2Algorithm, CustomAutoThreshold2D32Fv2Algorithm.ThresholdParameters, CustomAutoThreshold2D8UAlgorithm, CustomAutoThreshold2D8Uv2Algorithm, CustomAutoThreshold2D8Uv2Algorithm.ThresholdParameters, CustomExpressionVariablesParameter, DataAnnotationToStringAnnotation, DataBatchSlicer, DataExporterSettings, DataSlicer, DataToPreviewAlgorithm, DefaultCacheDisplaySettings, DefaultJIPipeParameterGenerator, DefaultResultImporterSettings, DefineParametersAlgorithm, DefineParametersFromTableAlgorithm, DefineParametersFromTableAlgorithm.Column, DefineParametersTableAlgorithm, DefineRectangularRoiAlgorithm, DefineTablesAlgorithm, DespeckleFilter2DAlgorithm, DiamondImageJ2ShapeData, DiamondTipsImageJ2ShapeData, DifferenceOfGaussian2DAlgorithm, DifferenceSpotSegmentation3DAlgorithm, DilateLabelsAlgorithm, DirectionalFilter2DAlgorithm, DisplayRangeCalibrationAlgorithm, DistanceMap3DAlgorithm, DistanceTransformWatershed2DAlgorithm, DistributeDataRandomlyByCountAlgorithm, DistributeDataRandomlyByPercentageAlgorithm, DivideByMaximumAlgorithm, DocumentTabPane.DocumentTab, DoubleConstantValueImageJ2OutOfBoundsFactoryData, DoubleFormData, DoubleFormGeneratorAlgorithm, DownloadFilesDataSource, DownloadOMEROImageAlgorithm, DownloadOMEROTableAlgorithm, DownloadSettings, DownloadSettings.DownloadEnvironment, DrawerLabelSettings, DrawMaskAlgorithm, DrawOvalRoiAlgorithm, DrawRectangleRoiAlgorithm, DrawROIAlgorithm, DrawScaleBarAlgorithm, DrawScaleBarAlgorithm.TextSettings, DrawScaleBarRoiAlgorithm, DrawScaleBarRoiAlgorithm.TextSettings, DrawTextRoiAlgorithm, DuplicateDataAlgorithm, DynamicParameterEditorDialog.ParameterEntry, EdgeFilter3DAlgorithm, EmptyImageJ2OutOfBoundsFactory, EmptyImageJ2ShapeData, EnumFormData, EnumFormGeneratorAlgorithm, EnumParameterGenerator, ErodedVolumeFraction3DAlgorithm, ExpandLabelsAlgorithm, ExplodeRoi3DListAlgorithm, ExplodeRoiAlgorithm, ExportData, ExportDataByParameter, ExportDataTable, ExportDataTableByParameter, ExportImage2Algorithm, ExportImageAlgorithm, ExportROI3DAlgorithm, ExportROIAlgorithm, ExportScene3DToColladaAlgorithm, ExportTableAlgorithm, ExportTableAsXLSXAlgorithm, ExpressionSlicerAlgorithm, ExtendedMaxima2DAlgorithm, ExtendedMaxima3DAlgorithm, ExtendedMinima2DAlgorithm, ExtendedMinima3DAlgorithm, ExtensionSettings, ExternalEnvironment, ExtractAndReplaceAnnotation, ExtractDataAnnotation, ExtractFileName, ExtractFromROIAlgorithm, ExtractImageInRoiAlgorithm, ExtractImageMetadataAlgorithm, ExtractLabelStatisticsAlgorithm, ExtractOverlay3DAlgorithm, ExtractOverlayAlgorithm, ExtractParametersAlgorithm, ExtractParent, ExtractRoi2DRelationStatisticsAlgorithm, ExtractROI3DMetadataAlgorithm, ExtractRoi3DRelationStatisticsAlgorithm, ExtractRoi3DStatisticsAlgorithm, ExtractROIMetadataAlgorithm, ExtractTableAlgorithm, Fast3DFiltersAdaptiveAlgorithm, Fast3DFiltersAlgorithm, Fast3DFiltersCloseAlgorithm, Fast3DFiltersLocalMaxAlgorithm, Fast3DFiltersMaxAlgorithm, Fast3DFiltersMeanAlgorithm, Fast3DFiltersMedianAlgorithm, Fast3DFiltersMinAlgorithm, Fast3DFiltersOpenAlgorithm, Fast3DFiltersSobelAlgorithm, Fast3DFiltersTopHatAlgorithm, Fast3DFiltersVarianceAlgorithm, FastCircularHoughSegmentation2DAlgorithm, FastKeyValueThresholdStatisticsGenerator, FFT2DForwardTransform, FFT2DInverseTransform, FFT2DSwapQuadrants, FilamentsDrawer, FileChooserBookmark, FileChooserSettings, FileDataSource, FileListDataSource, FilesystemExtensionSettings, FilterAndMergeRoiByStatisticsScriptAlgorithm, FilterByAnnotation, FilterByAnnotationIfElse, FilterFilamentEdgesByProperties, FilterFilamentsByProperties, FilterFilamentVerticesByProperties, FilterLabelsByExpression2DAlgorithm, FilterLabelsByExpression3DAlgorithm, FilterLabelsByIdAlgorithm, FilterLabelsByMaskAlgorithm, FilterLabelsByOverlapAlgorithm, FilterLabelsByOverlapAlgorithm.LabelFilterSettings, FilterLabelsByStatisticsAlgorithm, FilterLabelsByThicknessAlgorithm, FilterPaths, FilterRoi3DByOverlapAlgorithm, FilterRoi3DByOverlapAlgorithm.ROIFilterSettings, FilterRoi3DByStatisticsAlgorithm, FilterRoi3DListsAlgorithm, FilterRoiByNameAlgorithm, FilterROIByOverlapAlgorithm, FilterROIByOverlapAlgorithm.ROIFilterSettings, FilterRoiByStatisticsAlgorithm, FilterRoiByStatisticsScriptAlgorithm, FilterROIListsAlgorithm, FilterTableRowsAlgorithm, FilterTablesAlgorithm, FindHoles2DAlgorithm, FindMaxima3DAlgorithm, FindParticles2D, FindParticles3DAlgorithm, FixedMargin, FixOverlapsNonBranchingAlgorithm, FloatConstantValueImageJ2OutOfBoundsFactoryData, FolderDataSource, FolderListDataSource, FollowSpotsPerTrackNode, FormData, FormData.TabSettings, FormGeneratorAlgorithm, FrangiVesselnessFeatures, GaussianBlur2DAlgorithm, GaussianBlur3DAlgorithm, GaussianFitSpotSegmentation3DAlgorithm, GeneralDataSettings, GeneralUISettings, GenerateColumnAlgorithm, GeneratedParameters, GenerateFromMathExpression2D, GenerateLUTImageFromColorMap, GenerateMissingImageFromMathExpression2D, GenerateMissingRoiListsAlgorithm, GenerateMissingTablesAlgorithm, GenerateMissingTablesAlgorithm2, GenerateMissingZeroImage, GenerateParametersFromExpressionAlgorithm, GenerateParametersFromExpressionAlgorithm.Column, GenerateRandomUniqueAnnotation, GenerateStructureElement2DAlgorithm, GenerateStructureElement3DAlgorithm, GenerateTableFromExpressionAlgorithm, GenerateUniqueAnnotation, GenerateVectorFromMathExpression, GenerateZeroImage, GeodesicDistanceMap2DAlgorithm, GetJIPipeSlotFolderAlgorithm, GetLabelBoundariesAlgorithm, GetRoiImageAlgorithm, GraphEditorUISettings, GraphEditorUISettings.AlgorithmFinderSettings, GraphEditorUISettings.SearchSettings, GraphNodeParameterReference, GraphNodeParameterReferenceAccessGroup, GraphNodeParameterReferenceAccessGroupList, GraphNodeParameterReferenceGroup, GraphNodeParameterReferenceGroupCollection, GraphWrapperAlgorithm, GraphWrapperAlgorithmInput, GraphWrapperAlgorithmOutput, GrayscaleAttributeFiltering2DAlgorithm, GrayscaleAttributeFiltering3DAlgorithm, GroupBoxAnnotationGraphNode, GroupHeaderFormData, GroupHeaderFormGeneratorAlgorithm, GroupSceneAlgorithm, Hessian2DAlgorithm, HessianSegmentation2DAlgorithm, HistogramAlgorithm, HistogramContrastEnhancerAlgorithm, HistogramGenerator, HistogramPlotData, HistoryJournalSettings, HorizontalLineImageJ2ShapeData, HyperSphereImageJ2ShapeData, HyperstackSlicerAlgorithm, HysteresisSegmentation3DAlgorithm, IlluminationCorrection2DAlgorithm, Image3DRendererSettings, ImageBlendLayer, ImageBoxAnnotationGraphNode, ImageBoxAnnotationGraphNode.ImageParameters, ImageCalculator2DAlgorithm, ImageCalculator2DExpression, ImageComparer2DAlgorithm, ImageFromMatrix2DAlgorithm, ImageJ2OpNode, ImageJ2OutOfBoundsFactoryData, ImageJ2ShapeData, ImageJDataExportOperation, ImageJDataExportOperationRef, ImageJDataImportOperation, ImageJDataImportOperationRef, ImageJDataTypesSettings, ImageJExportParameters, ImageJImportParameters, ImagePlusFromFile, ImagePlusFromGUI, ImagePlusToGUI, ImagePropertiesToAnnotationAlgorithm, ImageStackFromFolder, ImageStatisticsAlgorithm, ImageStatisticsExpressionAlgorithm, ImageToMatrixAlgorithm, ImageToTableAlgorithm, ImageToTableColumnAlgorithm, ImageTypeConverter, ImageViewer2DUISettings, ImageViewer3DUISettings, ImageViewerGeneralUISettings, ImageViewerPanel2D.CompositeLayer, ImageViewerUIFilamentDisplaySettings, ImageViewerUIROI2DDisplaySettings, ImageViewerUIROI3DDisplaySettings, ImageViewerUISpotsDisplaySettings, ImageViewerUITracksDisplaySettings, ImportCellposeModelAlgorithm, ImportCellposeSizeModelAlgorithm, ImportDataRowFolder, ImportDataTableArchive, ImportDataTableDirectory, ImportFilamentsFromJsonAlgorithm, ImportJIPipeSlotFolderAlgorithm, ImportLUTAsRGBFromFile, ImportRDatasetAlgorithm, ImportROI3DAlgorithm, ImportWekaModelFromFileAlgorithm, ImposeMaxima2DAlgorithm, ImposeMaxima3DAlgorithm, InnerMargin, InputImagesToMontage, InputSlotMapParameterCollection, IntegerConstantValueImageJ2OutOfBoundsFactoryData, IntegerFormData, IntegerFormGeneratorAlgorithm, IntegrateColumnsAlgorithm, InternalGradientSegmentation2DAlgorithm, InvertColorsAlgorithm, IOInterfaceAlgorithm, IteratingFormProcessorAlgorithm, IteratingJythonScriptAlgorithm, IteratingPythonScriptAlgorithm, IteratingRScriptAlgorithm, IterativeThreshold3DAlgorithm, IterativeThresholdByROIStatistics2DAlgorithm, IterativeThresholdByROIStatistics2DAlgorithm.FilteringParameters, IterativeThresholdByROIStatistics2DAlgorithm.ScoreParameters, JIPipeAdaptiveParameterSettings, JIPipeAdvancedParameterEditorUI.Settings, JIPipeAlgorithm, JIPipeAnnotationGraphNode, JIPipeAuthorMetadata, JIPipeCommentNode, JIPipeCompartmentOutput, JIPipeDataByMetadataExporter, JIPipeDataSlotInfo, JIPipeDataTableToFilesByMetadataExporterRun.Settings, JIPipeDummyParameterCollection, JIPipeDynamicParameterCollection, JIPipeGraphNode, JIPipeImageJUpdateSiteDependency, JIPipeIteratingAlgorithm, JIPipeIteratingAlgorithmDataBatchGenerationSettings, JIPipeIteratingMissingDataGeneratorAlgorithm, JIPipeIteratingMissingDataGeneratorDataBatchGenerationSettings, JIPipeJsonExtension, JIPipeMergingAlgorithm, JIPipeMergingAlgorithmDataBatchGenerationSettings, JIPipeMetadata, JIPipeMissingDataGeneratorAlgorithm, JIPipeMissingDataGeneratorDataBatchGenerationSettings, JIPipeNodeTemplate, JIPipeParameterlessSimpleIteratingAlgorithm, JIPipeParameterlessSimpleIteratingAlgorithm.DataBatchGenerationSettings, JIPipeParameterSlotAlgorithm, JIPipeParameterSlotAlgorithmSettings, JIPipeParameterTree, JIPipePlotSeriesBuilder, JIPipeProjectCompartment, JIPipeProjectInfoParameters, JIPipeProjectMetadata, JIPipeProjectParameterDefinition, JIPipeProjectPermissions, JIPipePythonAdapterLibraryEnvironment, JIPipeRunSettings, JIPipeSerializedParameterCollectionData, JIPipeSettingsRegistry, JIPipeSimpleIteratingAlgorithm, JIPipeSimpleIteratingAlgorithmDataBatchGenerationSettings, JIPipeSingleIterationAlgorithm, JIPipeSingleIterationAlgorithmDataBatchGenerationSettings, JsonAlgorithm, JsonNodeInfo, JythonScriptAlgorithm, KeepLargestLabelAlgorithm, KeepLargestRegionAlgorithm, KeyValueAveragesGenerator, KeyValueHistogramGenerator, KeyValueThresholdPartitionAveragesGenerator, KeyValueThresholdPartitionGenerator, KeyValueThresholdPartitionGenerator.GeneratedColumn, KeyValueThresholdStatisticsGenerator, LabelChamferDistanceMap3DAlgorithm, LabelsToRGBAlgorithm, LabelsToROIAlgorithm, LaplacianEdgeDetectorAlgorithm, LaplacianOfGaussian2DAlgorithm, LaplacianSharpen2DAlgorithm, LineCategoryPlotData, LinesHoughDetection2DAlgorithm, LineStatisticalCategoryPlotData, LineXYPlotData, ListFiles, ListSubfolders, LocalAutoThreshold2DAlgorithm, LocalImageCalculator2DExpression, LocalMaxima2DAlgorithm, LocalMaximumFilter2DAlgorithm, LocalMaximumFilter3DAlgorithm, LocalMeanSpotSegmentation3DAlgorithm, LocalMinimumFilter2DAlgorithm, LocalMinimumFilter3DAlgorithm, LocalVarianceFilter2DAlgorithm, LocalVarianceFilter3DAlgorithm, LongConstantValueImageJ2OutOfBoundsFactoryData, LoopEndNode, LoopStartNode, LUTInverterAlgorithm, MacroWrapperAlgorithm, ManualHSBThreshold2DAlgorithm, ManualLABThreshold2DAlgorithm, ManualRGBThreshold2DAlgorithm, ManualThreshold16U2DAlgorithm, ManualThreshold32F2DAlgorithm, ManualThreshold8U2DAlgorithm, Margin, MaskDrawerFormData, MaskTo3DMeshAlgorithm, MaskToRoiAlgorithm, MatrixToImageAlgorithm, MeasureBranchesNode, MeasureEdgesAlgorithm, MeasureEdgesNode, MeasureFilamentsAlgorithm, Measurement2DSettings, Measurement3DSettings, MeasurementDrawerPlugin2D.Settings, MeasureSpotsNode, MeasureTracksNode, MeasureVerticesAlgorithm, MedianBlurFilter2DAlgorithm, MedianBlurFilter3DAlgorithm, MedianBlurGreyscale8U2DAlgorithm, MedianBlurRGB2DAlgorithm, MeijeringVesselness2DFeatures, MeltTableAlgorithm, Merge2DToHyperstackAlgorithm, MergeAnnotations, MergeChannelsAlgorithm, MergeColumnsAlgorithm, MergeDataSlots, MergeDataToTableAlgorithm, MergeFilamentsAlgorithm, MergeImagesAlgorithm, MergeLabelsAlgorithm, MergeLabelsToThicknessAlgorithm, MergeParametersAlgorithm, MergeROI3DAlgorithm, MergeRoiListsAlgorithm, MergeScenesAlgorithm, MergeSmallLabelsAlgorithm, MergeSpotsNode, MergeTableColumnsSimpleAlgorithm, MergeTableColumnsSupplementAlgorithm, MergeTableRowsAlgorithm, MergeTracksNode, MergingFormProcessorAlgorithm, MergingJythonScriptAlgorithm, MergingPythonScriptAlgorithm, MergingRScriptAlgorithm, MinicondaCellposeEnvInstaller.Configuration, MinicondaCellposeGPUEnvInstaller.Configuration, MinicondaEnvPythonInstaller.Configuration, MirrorImageJ2OutOfBoundsFactoryData, ModifyAndMergeTablesScript, ModifyAnnotationScript, ModifyPath, ModifyTableColumnNamesAlgorithm, ModifyTablesScript, MontageToStackAlgorithm, MorphologicalReconstruction2DAlgorithm, MorphologicalReconstruction3DAlgorithm, Morphology2DAlgorithm, Morphology3DAlgorithm, MorphologyBinary2DAlgorithm, MorphologyFillHoles2DAlgorithm, MorphologyInternalGradient2DAlgorithm, MorphologyOutline2DAlgorithm, MorphologySkeletonize2DAlgorithm, MorphologySkeletonize3DAlgorithm, MSEBlockFlowAlgorithm, MSEGaussianFlowAlgorithm, MultiTemplateMatchingAlgorithm, NewSplitChannelsAlgorithm, NewZProjectorAlgorithm, NiblackLocalAutoThreshold2DAlgorithm, NodeGroup, NodeTemplateSettings, NotificationUISettings, NucleiSegmentation3DAlgorithm, NumberRangeParameterGenerator, OMEExporterSettings, OMEImageFromImagePlus, OMEROCredentials, OMERODatasetReferenceDataSource, OMEROFindDatasetAlgorithm, OMEROFindGroupAlgorithm, OMEROFindImageAlgorithm, OMEROFindProjectAlgorithm, OMEROGroupReferenceDataSource, OMEROImageReferenceDataSource, OMEROProjectReferenceDataSource, OMEROSettings, OmniposeAlgorithm, OmniposeSegmentationThresholdSettings, OmniposeSegmentationTweaksSettings, OmniposeSettings, OmniposeTrainingAlgorithm, OmniposeTrainingTweaksSettings, OutlineRoi3DAlgorithm, OutlineRoiAlgorithm, OutputFolderDataSource, OutputSlotMapParameterCollection, OverlapMeasureLabelsAlgorithm, OverlayImagesAlgorithm, OverlayImagesAlgorithm.Channel, OverwriteAnnotations, PairOfPointsImageJ2ShapeData, ParameterFormData, ParametersToAnnotationsAlgorithm, PathDataSource, PathFormData, PathFormGeneratorAlgorithm, PathFromUserDataSource, PathListDataSource, PathsToJIPipeProjectParametersAlgorithm, PercentileThreshold8U2DAlgorithm, PeriodicImageJ2OutOfBoundsFactoryData, PeriodicLineImageJ2ShapeData, PhansalkarLocalAutoThreshold2DAlgorithm, Pie2DPlotData, Pie3DPlotData, PiePlotData, PlotData, PlotDataSeries, PlotEditor, PlotTables2Algorithm, PlotTablesAlgorithm, PMCCBlockFlowAlgorithm, PortableCellposeEnvInstaller.Configuration, PortableCellposeGPUEnvInstaller.Configuration, PortableEnvPythonInstaller.Configuration, ProcessEnvironment, ProcessesExtensionSettings, ProjectsSettings, PullDataTableAnnotations, PushDataTableAnnotations, PythonEnvironment, PythonExtensionSettings, PythonPackageLibraryEnvironment, PythonPackageLibraryEnvironmentInstaller.Configuration, PythonScriptAlgorithm, QuickRunSettings, RectangleImageJ2ShapeData, ReferencedAppendRectangularRoiAlgorithm, ReferencedDefineRectangularRoiAlgorithm, RegionalMaxima2DAlgorithm, RegionalMaxima3DAlgorithm, RegionalMinima2DAlgorithm, RegionalMinima3DAlgorithm, RegisterRoiToImageByBrightnessAlgorithm, RelativizeByParameter, RelativizePaths, RemapLabelsAlgorithm, RemoveAnnotationAlgorithm, RemoveArrayAnnotationsAlgorithm, RemoveBorderFilaments, RemoveBorderLabelsAlgorithm, RemoveBorderRoi3DAlgorithm, RemoveBorderRoisAlgorithm, RemoveColumnAlgorithm, RemoveDataAnnotations, RemoveDuplicateVerticesAlgorithm, RemoveImageMetadataAlgorithm, RemoveLargestLabelAlgorithm, RemoveLargestRegionAlgorithm, RemoveLUTAlgorithm, RemoveNAAnnotationColumnsAlgorithm, RemoveNaNFilter2DAlgorithm, RemoveOutliersFilter2DAlgorithm, RemoveOverlay3DAlgorithm, RemoveOverlayAlgorithm, RemoveROI3DMetadataAlgorithm, RemoveROIMetadataAlgorithm, RenameAnnotation, RenameByString, RenameDataAnnotation, RenameSingleColumnsAlgorithm, RenameTableColumns2Algorithm, RenameTableColumns2Algorithm.RenamingEntry, RenameTableColumnsAlgorithm, RenameTableColumnsToAnnotationAlgorithm, RenderImageToRGBAlgorithm, RenderJIPipeProjectAlgorithm, RenderOverlay3DAlgorithm, RenderOverlayAlgorithm, RenderPipelineRunSettings, REnvInstaller.Configuration, REnvironment, ReorderDimensionsAlgorithm, ReorderHyperstackSlicesExpressionAlgorithm, ReorderRoiDimensionsAlgorithm, ReplaceLabelsAlgorithm, ReplaceLabelsByTableAlgorithm, ResliceAlgorithm, ResultsTableFromFile, ResultsTableFromGUI, ResultsTableToGUI, RExtensionSettings, RidgeDetector2DAlgorithm, Roi2DToRoi3DConverterAlgorithm, ROI3DCalculatorAlgorithm, Roi3DDrawer, Roi3DFromLabelsAlgorithm, Roi3DTo3DMeshAlgorithm, Roi3DToLabelsAlgorithm, Roi3DToMaskAlgorithm, Roi3DToRGBAlgorithm, Roi3DToRoi2DConverterAlgorithm, RoiCalculatorAlgorithm, ROIDataFromFile, ROIDataFromOMEImage, RoiDrawer, ROIDrawerFormData, ROIEditor, RoiFloodFillAlgorithm, ROIFromGUI, ROIProperties, RoiPropertiesToAnnotationsAlgorithm, RoiStatisticsAlgorithm, RoiToCentroidAlgorithm, ROIToGUI, ROIToLabelsByNameAlgorithm, ROIToLabelsByNameAlgorithm.ROINameToLabelEntry, ROIToLabelsExpressionAlgorithm, RoiToMaskAlgorithm, RoiToRGBAlgorithm, RollingBallBackgroundEstimator2DAlgorithm, RotateRoiAlgorithm, RoundFloatImageAlgorithm, RunExpressionAlgorithm, RunImageJExporterAlgorithm, RunImageJImporterAlgorithm, RunJIPipeProjectAlgorithm, RunProcessIteratingAlgorithm, RunProcessMergingAlgorithm, RuntimeSettings, SauvolaLocalAutoThreshold2DAlgorithm, ScaleRoiAlgorithm, ScatterXYPlotData, Scene3DLineGeometry, Scene3DLineGeometry.LineEndPoint, Scene3DSphereGeometry, SeededWatershedSegmentationAlgorithm, SeedSegmentationSettings, SelectCondaEnvPythonInstaller.Configuration, SelectDataTableRowsAlgorithm, SelectSystemPythonInstaller.Configuration, SelectVirtualEnvPythonInstaller.Configuration, SetBioFormatsExporterSettings, SetImageMetadataFromTableAlgorithm, SetLUTFromColorMapAlgorithm, SetLUTFromColorsAlgorithm, SetLUTFromImageAlgorithm, SetOverlay3DAlgorithm, SetOverlayAlgorithm, SetPhysicalDimensionsAlgorithm, SetPhysicalDimensionsByAnnotationsAlgorithm, SetPhysicalDimensionsByExpressionsAlgorithm, SetROI3DMetadataFromTableAlgorithm, SetRoiImageAlgorithm, SetRoiMetadataByStatisticsAlgorithm, SetRoiMetadataByStatisticsAlgorithm.MetadataProperty, SetROIMetadataFromTableAlgorithm, SetSingleAnnotation, SetToColorAlgorithm, SetToValueAlgorithm, SetVertexIntensityFromImageAlgorithm, SetVertexMetadataFromImageAlgorithm, SetVertexPhysicalSizeFromImageAlgorithm, SetVertexRadiusFromImageAlgorithm, ShortConstantValueImageJ2OutOfBoundsFactoryData, SimpleFileAnnotationGenerator, SimpleFolderAnnotationGenerator, SimpleFormGeneratorAlgorithm, SimpleImageAndRoiIteratingAlgorithm, SimpleIteratingFormProcessorAlgorithm, SimpleIteratingJythonScriptAlgorithm, SimplePathAnnotationGenerator, SimplifyAnnotationsAlgorithm, SimplifyFilamentsAlgorithm, SingleAnnotationIOSettings, SkeletonToFilaments2DAlgorithm, SkeletonToFilaments3DAlgorithm, SkeletonToSimplifiedFilamentsFijiAlgorithm, SleepAlgorithm, SlicerControlsPlugin3D.MultiOrthoSlicerSettings, SliceROIListAlgorithm, SliceTableRowsAlgorithm, SlotMapParameterCollection, SmoothFilamentsAlgorithm, SnapshotSettings, SobelEdgeDetectorAlgorithm, SortAndExtractRoiByStatisticsAlgorithm, SortAndExtractRoiByStatisticsAlgorithm2, SortRoiListByExpressionsAndMeasurementsAlgorithm, SortRowsByAnnotationsAlgorithm, SortRowsByExpressionAlgorithm, SortRowsByExpressionAlgorithm.SortEntry, SortTableColumnsAlgorithm, SortTableRowsAlgorithm, SplitByAnnotation, SplitByAnnotationScript, SplitByDimensionAlgorithm, SplitChannelsAlgorithm, SplitFilamentsIntoConnectedComponentsAlgorithm, SplitRGBChannelsAlgorithm, SplitRoi3DIntoConnectedComponentsAlgorithm, SplitRoiAlgorithm, SplitRoiConnectedComponentsAlgorithm, SplitSpotsNode, SplitTableByColumnsAlgorithm, SplitTableIntoColumnsAlgorithm, SplitTableIntoRowsAlgorithm, SplitTracksNode, SpotDetectorNode, SpotDrawer, SpotDrawer.LabelSettings, SpotFeatureFilterParameter, SpotFeaturePenaltyParameter, SpotFilterNode, SpotSegmentation3DAlgorithm, SpotSegmentation3DAlgorithm.SpotSegmentationSettings, SpotsToRGBNode, StackCombinerAlgorithm, StackedBarCategoryPlotData, StackInverterAlgorithm, StackSplitterAlgorithm, StackTo2DAlgorithm, StackToDimensionMerger2Algorithm, StackToDimensionMergerAlgorithm, StackToMontageAlgorithm, StatisticalCategoryPlotData, StringDefinitionDataSource, StringFormData, StringFormGeneratorAlgorithm, StringOrDouble, SymmetryFilter3DAlgorithm, TableColumnToImageAlgorithm, TablesFromScript, TableToCircularROIAlgorithm, TableToImageAlgorithm, TableToRectangularROIAlgorithm, TableViewerUISettings, TemporaryFileDataSource, TemporaryFolderDataSource, TextBoxAnnotationGraphNode, TextBoxAnnotationGraphNode.ShapeParameters, ThresholdByAnnotation2DAlgorithm, TileImage2DAlgorithm, TileImage2Dv2Algorithm, ToDataStringAlgorithm, ToHSBColorSpaceConverterAlgorithm, ToLABColorSpaceConverterAlgorithm, ToRGBColorSpaceConverterAlgorithm, TrackDrawer, TrackFeatureFilterParameter, TrackFilterNode, TrackingNode, TrackSchemeRendererNode, TracksToRGBNode, TransformCrop2DAlgorithm, TransformEqualCanvasSize2DAlgorithm, TransformEqualizeDimensionsAlgorithm, TransformExpandCanvas2DAlgorithm, TransformFlip2DAlgorithm, TransformRotate2DAlgorithm, TransformRotateFree2DAlgorithm, TransformScale2DAlgorithm, TransformScale3DAlgorithm, TransformSetHyperstackDimensionsAlgorithm, UltimateErodedPoints2DAlgorithm, UnMeltTableAlgorithm, UnreferencedRoiToMaskAlgorithm, UnreferencedRoiToRGBAlgorithm, UnsetRoiImageAlgorithm, UnTileImage2DAlgorithm, UploadOMEROImageAlgorithm, UploadOMEROTableAlgorithm, UsePlaceholderForMissingDataAlgorithm, VolumeOpening2DAlgorithm, VolumeOpening3DAlgorithm, Voronoi2DAlgorithm, Voronoi3DAlgorithm, Warp2DAlgorithm, Watershed3DSegmentationAlgorithm, Watershed3DSplittingAlgorithm, WekaClassification2DAlgorithm, WekaClassification3DAlgorithm, WekaClassifierSettings, WekaFeature2DSettings, WekaFeature3DSettings, WekaTiling2DSettings, WekaTiling3DSettings, WekaTrainingLabels2DAlgorithm, WekaTrainingMask2DAlgorithm, WekaTrainingROI2DAlgorithm, WekaTrainingROI3DAlgorithm, XYPlotData, ZProjectorAlgorithm
```
public interface JIPipeParameterCollection
```
Interfaced for a parameterized object

Nested Class Summary

Nested Classes
Modifier and Type	Interface and Description
`static class`	`JIPipeParameterCollection.ParameterChangedEvent` Triggered when a parameter holder's parameters are changed
`static class`	`JIPipeParameterCollection.ParameterChangedEventEmitter` Emitter for `JIPipeParameterCollection.ParameterChangedEvent`
`static interface`	`JIPipeParameterCollection.ParameterChangedEventListener` Listener for `JIPipeParameterCollection.ParameterChangedEvent`
`static class`	`JIPipeParameterCollection.ParameterStructureChangedEvent` Triggered by an `JIPipeParameterCollection` if the list of available parameters is changed.
`static class`	`JIPipeParameterCollection.ParameterStructureChangedEventEmitter` Emitter for `JIPipeParameterCollection.ParameterStructureChangedEvent`
`static interface`	`JIPipeParameterCollection.ParameterStructureChangedEventListener` Listener for `JIPipeParameterCollection.ParameterStructureChangedEvent`
`static class`	`JIPipeParameterCollection.ParameterUIChangedEvent` Triggered by an `JIPipeParameterCollection` if the parameter UI should be updated
`static class`	`JIPipeParameterCollection.ParameterUIChangedEventEmitter` Emitter for `JIPipeParameterCollection.ParameterUIChangedEvent`
`static interface`	`JIPipeParameterCollection.ParameterUIChangedEventListener` Listener for `JIPipeParameterCollection.ParameterUIChangedEvent`

Method Summary

All Methods Instance Methods Abstract Methods Default Methods
Modifier and Type	Method and Description
`default void`	`emitParameterChangedEvent(String key)` Triggers a `JIPipeParameterCollection.ParameterChangedEvent` on this collection
`default void`	`emitParameterStructureChangedEvent()` Triggers a `JIPipeParameterCollection.ParameterStructureChangedEvent` on this collection
`default void`	`emitParameterUIChangedEvent()` Triggers a `JIPipeParameterCollection.ParameterUIChangedEvent` on this collection
`default List<JIPipeParameterCollectionContextAction>`	`getContextActions()` List of context actions that are added to this collection.
`default <T> T`	`getParameter(String key, Class<T> klass)` Gets a parameter
`default JIPipeParameterAccess`	`getParameterAccess(String key)` Gets an access instance to a parameter of the defined key
`JIPipeParameterCollection.ParameterChangedEventEmitter`	`getParameterChangedEventEmitter()` Emitter for changes in the parameter
`JIPipeParameterCollection.ParameterStructureChangedEventEmitter`	`getParameterStructureChangedEventEmitter()` Emitter for changes in the structure of parameters
`JIPipeParameterCollection.ParameterUIChangedEventEmitter`	`getParameterUIChangedEventEmitter()` Emitter for changes in the parameter user interface
`default JComponent`	`installUIOverrideParameterEditor(ParameterPanel parameterPanel, JIPipeParameterEditorUI parameterEditorUI)` Allows to replace the UI that is inserted into the parameter panel with a different component Labels are not affected Please note that the root parameter collection handles this task for all sub-parameters
`default void`	`installUIParameterOptions(ParameterPanel parameterPanel, JIPipeParameterEditorUI parameterEditorUI, JPopupMenu menu)` Allows to install additional operations into the context menu of each parameter (triangle menu next to the help) Please note that the root parameter collection handles this task for all sub-parameters
`default boolean`	`isParameterUIVisible(JIPipeParameterTree tree, JIPipeParameterAccess access)` Allows to override the visibility of parameters inside the UI
`default boolean`	`isParameterUIVisible(JIPipeParameterTree tree, JIPipeParameterCollection subParameter)` Allows to override the visibility of sub-parameters inside the UI
`default boolean`	`setParameter(String key, Object value)` Sets a parameter and triggers the associated events

- Method Detail
  - isParameterUIVisible
```
default boolean isParameterUIVisible(JIPipeParameterTree tree,
                                     JIPipeParameterAccess access)
```
    Allows to override the visibility of parameters inside the UI
    
    Parameters:
    
    tree - the parameter tree that is used to access this parameter
    
    access - the parameter
    
    Returns:
    
    if the parameter is visible inside the UI
  - isParameterUIVisible
```
default boolean isParameterUIVisible(JIPipeParameterTree tree,
                                     JIPipeParameterCollection subParameter)
```
    Allows to override the visibility of sub-parameters inside the UI
    
    Parameters:
    
    tree - the parameter tree that is used to access this parameter
    
    subParameter - a sub parameter
    
    Returns:
    
    if the parameter is visible inside the UI
  - emitParameterStructureChangedEvent
```
default void emitParameterStructureChangedEvent()
```
    Triggers a JIPipeParameterCollection.ParameterStructureChangedEvent on this collection
  - emitParameterUIChangedEvent
```
default void emitParameterUIChangedEvent()
```
    Triggers a JIPipeParameterCollection.ParameterUIChangedEvent on this collection
  - emitParameterChangedEvent
```
default void emitParameterChangedEvent(String key)
```
    Triggers a JIPipeParameterCollection.ParameterChangedEvent on this collection
    
    Parameters:
    
    key - the parameter key
  - setParameter
```
default boolean setParameter(String key,
                             Object value)
```
    Sets a parameter and triggers the associated events
    
    Parameters:
    
    key - the parameter key
    
    value - the parameter value
    
    Returns:
    
    if the parameter could be set
  - getParameterAccess
```
default JIPipeParameterAccess getParameterAccess(String key)
```
    Gets an access instance to a parameter of the defined key
    
    Parameters:
    
    key - the parameter key
    
    Returns:
    
    the access instance
  - getParameter
```
default <T> T getParameter(String key,
                           Class<T> klass)
```
    Gets a parameter
    
    Type Parameters:
    
    T - the parameter class
    
    Parameters:
    
    key - the parameter key
    
    klass - the parameter class
    
    Returns:
    
    the current value
  - getContextActions
```
default List<JIPipeParameterCollectionContextAction> getContextActions()
```
    List of context actions that are added to this collection. Does no influence the creation of context actions via JIPipeContextAction
    
    Returns:
    
    list of context actions
  - getParameterChangedEventEmitter
```
JIPipeParameterCollection.ParameterChangedEventEmitter getParameterChangedEventEmitter()
```
    Emitter for changes in the parameter
    
    Returns:
    
    the emitter
  - getParameterStructureChangedEventEmitter
```
JIPipeParameterCollection.ParameterStructureChangedEventEmitter getParameterStructureChangedEventEmitter()
```
    Emitter for changes in the structure of parameters
    
    Returns:
    
    the emitter
  - getParameterUIChangedEventEmitter
```
JIPipeParameterCollection.ParameterUIChangedEventEmitter getParameterUIChangedEventEmitter()
```
    Emitter for changes in the parameter user interface
    
    Returns:
    
    the emitter
  - installUIParameterOptions
```
default void installUIParameterOptions(ParameterPanel parameterPanel,
                                       JIPipeParameterEditorUI parameterEditorUI,
                                       JPopupMenu menu)
```
    Allows to install additional operations into the context menu of each parameter (triangle menu next to the help) Please note that the root parameter collection handles this task for all sub-parameters
    
    Parameters:
    
    parameterPanel - the parameter panel
    
    parameterEditorUI - the currently handled parameter editor
    
    menu - the menu
  - installUIOverrideParameterEditor
```
default JComponent installUIOverrideParameterEditor(ParameterPanel parameterPanel,
                                                    JIPipeParameterEditorUI parameterEditorUI)
```
    Allows to replace the UI that is inserted into the parameter panel with a different component Labels are not affected Please note that the root parameter collection handles this task for all sub-parameters
    
    Parameters:
    
    parameterPanel - the parameter panel
    
    parameterEditorUI - the currently handled parameter editor
    
    Returns:
    
    the component to be inserted into the parameter panel

Interface JIPipeParameterCollection

Nested Class Summary

Method Summary

Method Detail

isParameterUIVisible

isParameterUIVisible

emitParameterStructureChangedEvent

emitParameterUIChangedEvent

emitParameterChangedEvent

setParameter

getParameterAccess

getParameter

getContextActions

getParameterChangedEventEmitter

getParameterStructureChangedEventEmitter

getParameterUIChangedEventEmitter

installUIParameterOptions

installUIOverrideParameterEditor