2024/10/09 Omnipose package 0.2.1.1000 available
⚠ Fixed issues with newer GPU

The Omnipose 0.2.1 packages were updated and now support CUDA 11.8 and CUDA 12.1

You can learn more about the artifacts and how to update your project by visiting the documentation.

2024/10/09 Cellpose package 2.1.0.1000 available
⚠ Fixed issues with newer GPU

The Cellpose 2.1.0 packages were updated and now support CUDA 11.8 and CUDA 12.1

You can learn more about the artifacts and how to update your project by visiting the documentation.

2024/09/24 JIPipe 4.1.0 released
A new JIPipe version was released

We released a smaller JIPipe update that comes with important bugfixes, better GPU artifact selection, and the first version of the Ilastik integration.

You can learn more about the new JIPipe version here

2024/09/18 R package 4.4.0.1000 available
⚠ Fixed issues with Linux and macOS

We updated all R artifacts due to an issue on macOS and Linux.

We highly recommend to upgrade existing projects to the new R package version.

You can learn more about the artifact contents and how to upgrade your project to the newest version by visiting the documentation.

2024/09/18 Python package 3.10.15.1000 available
Newer Python version, now including plotting and Pytorch

We created new Python artifacts that are made available for all operating systems.

The new Python package now comes with more packages, including matplotlib, pytorch, seaborn and scipy. Please note that currently, Pytorch is only available for CPU processing.

You can learn more about the artifact contents and how to upgrade your project to the newest version by visiting the documentation.

2024/08/24 JIPipe 4.0.0 released
A new JIPipe version was released

After months of work on new features, rewrites, and enhancements, we finally could release JIPipe version 4.0.0.

Highlights include …

  • an improved user interface
  • a new way to provide 3rd party software (Python, Cellpose, etc.) that does all steps automatically
  • new image processing nodes

You can learn more about the new JIPipe version here