org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.sort

Class SortAndExtractRoiByStatisticsAlgorithm2

java.lang.Object

org.hkijena.jipipe.api.nodes.JIPipeGraphNode

org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

org.hkijena.jipipe.api.nodes.JIPipeParameterSlotAlgorithm

org.hkijena.jipipe.api.nodes.JIPipeIteratingAlgorithm

org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.sort.SortAndExtractRoiByStatisticsAlgorithm2

All Implemented Interfaces:

JIPipeFunctionallyComparable, JIPipeValidatable, JIPipeAdaptiveParametersAlgorithm, JIPipeDataBatchAlgorithm, JIPipeParallelizedAlgorithm, JIPipeParameterCollection

public class SortAndExtractRoiByStatisticsAlgorithm2
extends JIPipeIteratingAlgorithm

Wrapper around RoiManager

Nested Class Summary

Nested classes/interfaces inherited from class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

JIPipeGraphNode.BaseDirectoryChangedEvent, JIPipeGraphNode.Serializer

Nested classes/interfaces inherited from interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

JIPipeParameterCollection.ParameterChangedEvent, JIPipeParameterCollection.ParameterStructureChangedEvent, JIPipeParameterCollection.ParameterUIChangedEvent

Field Summary

Fields inherited from class org.hkijena.jipipe.api.nodes.JIPipeParameterSlotAlgorithm

SLOT_PARAMETERS

Constructor Summary

Constructors

Constructor and Description
SortAndExtractRoiByStatisticsAlgorithm2(JIPipeNodeInfo info) Instantiates a new node type.
SortAndExtractRoiByStatisticsAlgorithm2(SortAndExtractRoiByStatisticsAlgorithm2 other) Instantiates a new node type.

Method Summary

Modifier and Type	Method and Description
OptionalColorMapParameter	getMapFillColor()
OptionalColorMapParameter	getMapLineColor()
OptionalIntegerRange	getSelectedIndices()
MeasurementColumnSortOrder.List	getSortOrderList()
boolean	isAutoClamp()
void	run(JIPipeProgressInfo progressInfo) Runs the workload
protected void	runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo) Runs code on one data row
void	setAutoClamp(boolean autoClamp)
void	setMapFillColor(OptionalColorMapParameter mapFillColor)
void	setMapLineColor(OptionalColorMapParameter mapLineColor)
void	setSelectedIndices(OptionalIntegerRange selectedIndices)
void	setSortOrderList(MeasurementColumnSortOrder.List sortOrderList)

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeIteratingAlgorithm

generateDataBatchesDryRun, getAdaptiveParameterSettings, getDataBatchGenerationSettings, getGenerationSettingsInterface, getParallelizationBatchSize, isParallelizationEnabled, isParameterUIVisible, isParameterUIVisible, runParameterSet, runPassThrough, setParallelizationEnabled, supportsParallelization

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeParameterSlotAlgorithm

getDataInputSlotCount, getDataInputSlots, getFirstInputSlot, getNonParameterInputSlots, getParameterSlot, getParameterSlotAlgorithmSettings

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

canAutoPassThrough, canPassThrough, functionallyEquals, getThreadPool, isEnabled, isPassThrough, isPostprocessor, isPreprocessor, loadExample, reportValidity, runPassThrough, setEnabled, setPassThrough, setThreadPool

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

archiveTo, canUserDelete, clearLocations, clearSlotData, copySlotConfiguration, duplicate, fromJson, fromJsonNode, getAliasIdInParentGraph, getBaseDirectory, getCategory, getCompartmentDisplayName, getCompartmentUUIDInGraphAsString, getCompartmentUUIDInParentGraph, getCustomDescription, getDependencies, getDisplayName, getEventBus, getFirstOutputSlot, getInfo, getInputSlot, getInputSlotMap, getInputSlotOrder, getInputSlots, getInputSlotsWithRole, getInternalStoragePath, getLastInputSlot, getLastOutputSlot, getLocations, getLocationWithin, getName, getNewScratch, getOpenInputSlots, getOutputSlot, getOutputSlotMap, getOutputSlots, getOutputSlotsWithRole, getParentGraph, getProjectCompartment, getProjectDirectory, getScratchBaseDirectory, getSlotConfiguration, getStoragePath, getUUIDInParentGraph, hasInputSlot, hasOutputSlot, isBookmarked, isVisibleIn, onDeserialized, onParameterChanged, onParameterStructureChanged, onParameterUIChanged, onSlotConfigurationChanged, registerSubParameter, renderInputSlots, renderOutputSlots, setBaseDirectory, setBookmarked, setCustomDescription, setCustomName, setInfo, setInternalStoragePath, setLocations, setLocationWithin, setLocationWithin, setParentGraph, setProjectDirectory, setScratchBaseDirectory, setSlotConfiguration, setStoragePath, toggleSlot, toJson, triggerSlotsChangedEvent, updateGraphNodeSlots

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.hkijena.jipipe.api.JIPipeValidatable

generateValidityReport

Methods inherited from interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

addParameterChangeListener, addParameterChangeListener, getContextActions, getParameter, getParameterAccess, installUIOverrideParameterEditor, installUIParameterOptions, setParameter, triggerParameterChange, triggerParameterStructureChange, triggerParameterUIChange

Constructor Detail

SortAndExtractRoiByStatisticsAlgorithm2

public SortAndExtractRoiByStatisticsAlgorithm2(JIPipeNodeInfo info)

Instantiates a new node type.

Parameters:

info - the info

SortAndExtractRoiByStatisticsAlgorithm2

public SortAndExtractRoiByStatisticsAlgorithm2(SortAndExtractRoiByStatisticsAlgorithm2 other)

Instantiates a new node type.

Parameters:

other - the other

Method Detail

run

public void run(JIPipeProgressInfo progressInfo)

Description copied from class: JIPipeGraphNode

Runs the workload

Overrides:

run in class JIPipeParameterSlotAlgorithm

Parameters:

progressInfo - progress passed from the runner

runIteration

protected void runIteration(JIPipeDataBatch dataBatch,
                            JIPipeProgressInfo progressInfo)

Description copied from class: JIPipeIteratingAlgorithm

Runs code on one data row

Specified by:

runIteration in class JIPipeIteratingAlgorithm

Parameters:

dataBatch - The data interface

progressInfo - the progress info from the run

getSortOrderList

public MeasurementColumnSortOrder.List getSortOrderList()

setSortOrderList

public void setSortOrderList(MeasurementColumnSortOrder.List sortOrderList)

getSelectedIndices

public OptionalIntegerRange getSelectedIndices()

setSelectedIndices

public void setSelectedIndices(OptionalIntegerRange selectedIndices)

isAutoClamp

public boolean isAutoClamp()

setAutoClamp

public void setAutoClamp(boolean autoClamp)

getMapFillColor

public OptionalColorMapParameter getMapFillColor()

setMapFillColor

public void setMapFillColor(OptionalColorMapParameter mapFillColor)

getMapLineColor

public OptionalColorMapParameter getMapLineColor()

setMapLineColor

public void setMapLineColor(OptionalColorMapParameter mapLineColor)