org.hkijena.jipipe.plugins.plots

Class PlotsPlugin

java.lang.Object

org.scijava.AbstractContextual

org.scijava.plugin.AbstractRichPlugin

org.scijava.service.AbstractService

org.hkijena.jipipe.JIPipeDefaultJavaPlugin

org.hkijena.jipipe.plugins.JIPipePrepackagedDefaultJavaPlugin

org.hkijena.jipipe.plugins.plots.PlotsPlugin

All Implemented Interfaces:

Comparable<org.scijava.Prioritized>, JIPipeValidatable, JIPipeDependency, JIPipeJavaPlugin, JIPipePlugin, JIPipeService.DatatypeRegisteredEventListener, org.scijava.Contextual, org.scijava.Disposable, org.scijava.Identifiable, org.scijava.Initializable, org.scijava.Locatable, org.scijava.log.Logged, org.scijava.plugin.HasPluginInfo, org.scijava.plugin.RichPlugin, org.scijava.plugin.SciJavaPlugin, org.scijava.Prioritized, org.scijava.service.Service, org.scijava.Versioned

public class PlotsPlugin
extends JIPipePrepackagedDefaultJavaPlugin
implements JIPipeService.DatatypeRegisteredEventListener

Provides a standard selection of plots

Field Summary

Fields

Modifier and Type	Field and Description
static JIPipeDependency	AS_DEPENDENCY Dependency instance to be used for creating the set of dependencies
static JIPipeLegacyDataOperation[]	STANDARD_DATA_OPERATIONS

Constructor Summary

Constructors

Constructor and Description
PlotsPlugin()

Method Summary

Modifier and Type	Method and Description
Set<JIPipeDependency>	getDependencies() List of JIPipe dependencies.
StringList	getDependencyCitations() Returns all dependent work
String	getDependencyId()
StringList	getDependencyProvides() The list of alternative IDs that are covered by this dependency
HTMLText	getDescription()
String	getName()
void	onJIPipeDatatypeRegistered(JIPipeService.DatatypeRegisteredEvent event)
void	postprocess(JIPipeProgressInfo progressInfo) Called after registration.
void	register(JIPipe jiPipe, org.scijava.Context context, JIPipeProgressInfo progressInfo) Registers custom modules into JIPipe

Methods inherited from class org.hkijena.jipipe.plugins.JIPipePrepackagedDefaultJavaPlugin

getAuthors, getCitation, getDependencyVersion, getLicense, getLogo, getWebsite

Methods inherited from class org.hkijena.jipipe.JIPipeDefaultJavaPlugin

configureDefaultImageJAdapters, configureDefaultImageJAdapters, getAcknowledgements, getCategories, getDependencyLocation, getMetadata, getRegistry, getSummary, registerAnnotationNodeType, registerApplicationSettingsSheet, registerContextMenuAction, registerDatatype, registerDatatype, registerDatatypeConversion, registerDatatypeDisplayOperation, registerDatatypeImportOperation, registerDatatypeOperation, registerDefaultDataTypeViewer, registerEnumParameterType, registerEnvironment, registerEnvironmentInstaller, registerExpressionFunction, registerExpressionFunction, registerFileChooserKnownDirectoryType, registerFileChooserKnownDirectoryType, registerFileChooserKnownFileType, registerFileChooserKnownFileType, registerGraphEditorTool, registerGraphEditorToolBarButtonExtension, registerImageJDataExporter, registerImageJDataImporter, registerMenuExtension, registerMetadataObjectType, registerNodeExample, registerNodeExample, registerNodeExample, registerNodeExamplesFromResources, registerNodeExamplesFromResources, registerNodeTemplate, registerNodeTemplatesFromResources, registerNodeTemplatesFromResources, registerNodeType, registerNodeType, registerNodeType, registerNodeType, registerNodeType, registerNodeTypeCategory, registerParameterEditor, registerParameterGenerator, registerParameterType, registerParameterType, registerParameterType, registerParameterType, registerParameterType, registerParameterType, registerProjectSettingsSheet, registerProjectTemplatesFromResources, registerProjectTemplatesFromResources, registerTableColumnOperation, registerTableColumnOperationAndExpressionFunction, registerUtility, reportValidity, setRegistry

Methods inherited from class org.scijava.service.AbstractService

getContext, setContext, toString

Methods inherited from class org.scijava.plugin.AbstractRichPlugin

getInfo, getPriority, setInfo, setPriority

Methods inherited from class org.scijava.AbstractContextual

context

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.hkijena.jipipe.JIPipeJavaPlugin

getSplashIcons

Methods inherited from interface org.hkijena.jipipe.JIPipePlugin

canActivate, isActivated, isBeta, isCorePlugin, isScheduledForActivation, isScheduledForDeactivation

Methods inherited from interface org.hkijena.jipipe.JIPipeDependency

getAllDependencies, getAllDependencies, getAllImageJUpdateSiteDependencies, getImageJUpdateSiteDependencies, getImageJUpdateSites, simplifyAndMinimize, toHtmlElement

Methods inherited from interface org.hkijena.jipipe.api.validation.JIPipeValidatable

generateValidityReport

Methods inherited from interface org.scijava.service.Service

initialize, registerEventHandlers

Methods inherited from interface org.scijava.plugin.RichPlugin

getIdentifier, log

Methods inherited from interface org.scijava.Contextual

context

Methods inherited from interface org.scijava.Prioritized

compareTo, getPriority, setPriority

Methods inherited from interface org.scijava.plugin.HasPluginInfo

getInfo, setInfo

Methods inherited from interface org.scijava.Locatable

getLocation

Methods inherited from interface org.scijava.Versioned

getVersion

Methods inherited from interface org.scijava.Disposable

dispose

Field Detail

AS_DEPENDENCY

public static final JIPipeDependency AS_DEPENDENCY

Dependency instance to be used for creating the set of dependencies

STANDARD_DATA_OPERATIONS

public static JIPipeLegacyDataOperation[] STANDARD_DATA_OPERATIONS

Constructor Detail

PlotsPlugin

public PlotsPlugin()

Method Detail

getDependencies

public Set<JIPipeDependency> getDependencies()

Description copied from interface: JIPipeDependency

List of JIPipe dependencies. This can contain nested or even cyclic dependencies. The storage of dependencies into JSON format is handled by getTraversedDependencies()

Specified by:

getDependencies in interface JIPipeDependency

Overrides:

getDependencies in class JIPipeDefaultJavaPlugin

Returns:

the set of JIPipe dependencies

getDependencyCitations

public StringList getDependencyCitations()

Description copied from class: JIPipeDefaultJavaPlugin

Returns all dependent work

Specified by:

getDependencyCitations in class JIPipeDefaultJavaPlugin

Returns:

dependent work

getName

public String getName()

Specified by:

getName in class JIPipeDefaultJavaPlugin

Returns:

The extension name

getDescription

public HTMLText getDescription()

Specified by:

getDescription in class JIPipeDefaultJavaPlugin

Returns:

The extension description

getDependencyId

public String getDependencyId()

Specified by:

getDependencyId in interface JIPipeDependency

Returns:

The unique dependency ID

getDependencyProvides

public StringList getDependencyProvides()

Description copied from interface: JIPipeDependency

The list of alternative IDs that are covered by this dependency

Specified by:

getDependencyProvides in interface JIPipeDependency

Returns:

alternative IDs

register

public void register(JIPipe jiPipe,
                     org.scijava.Context context,
                     JIPipeProgressInfo progressInfo)

Description copied from interface: JIPipeJavaPlugin

Registers custom modules into JIPipe

Specified by:

register in interface JIPipeJavaPlugin

Parameters:

jiPipe - the JIPipe instance that calls this function

context - the SciJava Context

progressInfo - the progress info

postprocess

public void postprocess(JIPipeProgressInfo progressInfo)

Description copied from interface: JIPipeJavaPlugin

Called after registration.

Specified by:

postprocess in interface JIPipeJavaPlugin

onJIPipeDatatypeRegistered

public void onJIPipeDatatypeRegistered(JIPipeService.DatatypeRegisteredEvent event)

Specified by:

onJIPipeDatatypeRegistered in interface JIPipeService.DatatypeRegisteredEventListener