org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg

Class TurboRegImage

java.lang.Object

org.hkijena.jipipe.plugins.imagejalgorithms.utils.turboreg.TurboRegImage

All Implemented Interfaces:

Runnable

public class TurboRegImage
extends Object
implements Runnable

Customized copy of TurboRegImage (package private)

Constructor Summary

Constructors

Constructor and Description
TurboRegImage(ij.ImagePlus imp, TurboRegTransformationType transformation, boolean isTarget) Converts the pixel array of the incoming ImagePlus object into a local float array.

Method Summary

Modifier and Type	Method and Description
float[]	getCoefficient() Return the B-spline coefficients of the full-size image.
int	getHeight() Return the full-size image height.
float[]	getImage() Return the full-size image array.
Stack<Object>	getPyramid()
int	getPyramidDepth() Return the depth of the image pyramid.
int	getWidth() Return the full-size image width.
float[]	getXGradient() Return the full-size horizontal gradient of the image, if available.
float[]	getYGradient() Return the full-size vertical gradient of the image, if available.
void	run() Start the image precomputations.
void	setPyramidDepth(int pyramidDepth) Sets the depth up to which the pyramids should be computed.
void	setTransformation(TurboRegTransformationType transformation) Set or modify the transformation.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

TurboRegImage

public TurboRegImage(ij.ImagePlus imp,
                     TurboRegTransformationType transformation,
                     boolean isTarget)

Converts the pixel array of the incoming ImagePlus object into a local float array.

Parameters:

imp - ImagePlus object to preprocess.

transformation - Transformation code.

isTarget - Tags the current object as a target or source image.

Method Detail

getCoefficient

public float[] getCoefficient()

Return the B-spline coefficients of the full-size image.

getHeight

public int getHeight()

Return the full-size image height.

getImage

public float[] getImage()

Return the full-size image array.

getPyramid

public Stack<Object> getPyramid()

getPyramidDepth

public int getPyramidDepth()

Return the depth of the image pyramid. A depth 1 means that one coarse resolution level is present in the stack. The full-size level is not placed on the stack.

setPyramidDepth

public void setPyramidDepth(int pyramidDepth)

Sets the depth up to which the pyramids should be computed.

See Also:

getImage()

getWidth

public int getWidth()

Return the full-size image width.

getXGradient

public float[] getXGradient()

Return the full-size horizontal gradient of the image, if available.

See Also:

getPyramid()

getYGradient

public float[] getYGradient()

Return the full-size vertical gradient of the image, if available.

See Also:

getImage()

run

public void run()

Start the image precomputations. The computation of the B-spline coefficients of the full-size image is not interruptible; all other methods are.

Specified by:

run in interface Runnable

setTransformation

public void setTransformation(TurboRegTransformationType transformation)

Set or modify the transformation.