org.hkijena.jipipe.plugins.ijmultitemplatematching

Class MultiTemplateMatchingAlgorithm

java.lang.Object

org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection

org.hkijena.jipipe.api.nodes.JIPipeGraphNode

org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

org.hkijena.jipipe.plugins.ijmultitemplatematching.MultiTemplateMatchingAlgorithm

All Implemented Interfaces:

JIPipeSlotConfiguration.SlotConfigurationChangedEventListener, JIPipeFunctionallyComparable, JIPipeIterationStepAlgorithm, JIPipeAdaptiveParametersAlgorithm, JIPipeParallelizedAlgorithm, JIPipeParameterCollection, JIPipeParameterCollection.ParameterChangedEventListener, JIPipeParameterCollection.ParameterStructureChangedEventListener, JIPipeParameterCollection.ParameterUIChangedEventListener, JIPipeValidatable

public class MultiTemplateMatchingAlgorithm
extends JIPipeMergingAlgorithm

Nested Class Summary

Nested classes/interfaces inherited from class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

JIPipeGraphNode.BaseDirectoryChangedEvent, JIPipeGraphNode.BaseDirectoryChangedEventEmitter, JIPipeGraphNode.BaseDirectoryChangedEventListener, JIPipeGraphNode.NodeSlotsChangedEvent, JIPipeGraphNode.NodeSlotsChangedEventEmitter, JIPipeGraphNode.NodeSlotsChangedEventListener, JIPipeGraphNode.Serializer

Nested classes/interfaces inherited from interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

JIPipeParameterCollection.ParameterChangedEvent, JIPipeParameterCollection.ParameterChangedEventEmitter, JIPipeParameterCollection.ParameterChangedEventListener, JIPipeParameterCollection.ParameterStructureChangedEvent, JIPipeParameterCollection.ParameterStructureChangedEventEmitter, JIPipeParameterCollection.ParameterStructureChangedEventListener, JIPipeParameterCollection.ParameterUIChangedEvent, JIPipeParameterCollection.ParameterUIChangedEventEmitter, JIPipeParameterCollection.ParameterUIChangedEventListener

Field Summary

Fields

Modifier and Type	Field and Description
static JIPipeDataSlotInfo	OUTPUT_SLOT_MATCHED_TEMPLATES

Fields inherited from class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

SLOT_PARAMETERS

Constructor Summary

Constructors

Constructor and Description
MultiTemplateMatchingAlgorithm(JIPipeNodeInfo info)
MultiTemplateMatchingAlgorithm(MultiTemplateMatchingAlgorithm other)

Method Summary

Modifier and Type	Method and Description
void	generateRotations(JIPipeWorkbench workbench)
OptionalColorParameter	getAssembleTemplatesBackground()
OptionalDataInfoRefParameter	getAssembleTemplatesOutput()
int	getExpectedNumberOfObjects()
double	getMultiObjectMaximumBoundingBoxOverlap()
double	getMultiObjectScoreThreshold()
IntegerRange	getRotateTemplate()
TemplateMatchingMethod	getTemplateMatchingMethod()
boolean	isAssembleTemplates()
boolean	isFlipTemplateHorizontally()
boolean	isFlipTemplateVertically()
boolean	isOutputMatchedTemplates()
boolean	isRestrictToROI()
boolean	isWithNonMaximaSuppression()
protected void	runIteration(JIPipeMultiIterationStep iterationStep, JIPipeIterationContext iterationContext, JIPipeGraphNodeRunContext runContext, JIPipeProgressInfo progressInfo) Runs code on one data row
void	setAssembleTemplates(boolean assembleTemplates)
void	setAssembleTemplatesBackground(OptionalColorParameter assembleTemplatesBackground)
void	setAssembleTemplatesOutput(OptionalDataInfoRefParameter assembleTemplatesOutput)
boolean	setExpectedNumberOfObjects(int expectedNumberOfObjects)
void	setFlipTemplateHorizontally(boolean flipTemplateHorizontally)
void	setFlipTemplateVertically(boolean flipTemplateVertically)
boolean	setMultiObjectMaximumBoundingBoxOverlap(double multiObjectMaximumBoundingBoxOverlap)
boolean	setMultiObjectScoreThreshold(double multiObjectScoreThreshold)
void	setOutputMatchedTemplates(boolean outputMatchedTemplates)
void	setRestrictToROI(boolean restrictToROI)
void	setRotateTemplate(IntegerRange rotateTemplate)
void	setTemplateMatchingMethod(TemplateMatchingMethod templateMatchingMethod)
void	setWithNonMaximaSuppression(boolean withNonMaximaSuppression)

Methods inherited from class org.hkijena.jipipe.api.nodes.algorithm.JIPipeMergingAlgorithm

createUIInputSlotIconDescriptionMenuItems, generateDataBatchesGenerationResult, getAdaptiveParameterSettings, getDataBatchGenerationSettings, getGenerationSettingsInterface, getIgnoredAnnotationColumns, getParallelizationBatchSize, getUIInputSlotIcon, getUIInputSlotIconBaseDimensions, isParameterUIVisible, isParameterUIVisible, runParameterSet, runPassThrough, supportsParallelization

Methods inherited from class org.hkijena.jipipe.api.nodes.algorithm.JIPipeParameterSlotAlgorithm

getDataInputSlotCount, getDataInputSlots, getFirstInputSlot, getNonParameterInputSlots, getParameterSlot, getParameterSlotAlgorithmSettings, onParameterChanged, run

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

canAutoPassThrough, canPassThrough, functionallyEquals, getDefaultCustomExpressionVariables, getRuntimePartition, isEnabled, isEnableDefaultCustomExpressionVariables, isPassThrough, isPostprocessor, isPreprocessor, isSkipped, loadExample, onDeserialized, reportValidity, runPassThrough, setEnabled, setPassThrough, setRuntimePartition, setSkipped

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

archiveTo, canUserDelete, clearLocations, clearSlotData, copySlotConfiguration, duplicate, emitNodeSlotsChangedEvent, fromJson, getAliasIdInParentGraph, getBaseDirectory, getBaseDirectoryChangedEventEmitter, getCategory, getCompartmentDisplayName, getCompartmentUUIDInGraphAsString, getCompartmentUUIDInParentGraph, getCustomDescription, getCustomName, getDependencies, getDisplayName, getEnvironmentDependencies, getFirstOutputSlot, getInfo, getInputSlot, getInputSlotMap, getInputSlotOrder, getInputSlots, getInputSlotsWithRole, getInternalStoragePath, getLastInputSlot, getLastOutputSlot, getName, getNewScratch, getNodeSlotsChangedEventEmitter, getNodeUILocationPerViewModePerCompartment, getNodeUILocationWithin, getOpenInputSlots, getOutputSlot, getOutputSlotMap, getOutputSlots, getOutputSlotsWithRole, getParentGraph, getProject, getProjectCompartment, getProjectDataDirs, getProjectDirectory, getRuntimeProject, getScratchBaseDirectory, getSlotConfiguration, getStoragePath, getTextDescription, getUUIDInParentGraph, hasInputSlot, hasOutputSlot, isBookmarked, isUiLocked, isVisibleIn, onSlotConfigurationChanged, renderInputSlots, renderOutputSlots, setBaseDirectory, setBookmarked, setCustomDescription, setCustomName, setInfo, setInternalStoragePath, setNodeUILocationPerViewModePerCompartment, setNodeUILocationWithin, setNodeUILocationWithin, setParentGraph, setProjectDirectory, setRuntimeProject, setScratchBaseDirectory, setSlotConfiguration, setStoragePath, setUiLocked, toggleSlot, toJson, updateGraphNodeSlots

Methods inherited from class org.hkijena.jipipe.api.parameters.AbstractJIPipeParameterCollection

getParameterChangedEventEmitter, getParameterStructureChangedEventEmitter, getParameterUIChangedEventEmitter, onParameterStructureChanged, onParameterUIChanged, registerSubParameter, registerSubParameters

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.hkijena.jipipe.api.nodes.iterationstep.JIPipeIterationStepAlgorithm

generateDataBatchesDryRun

Methods inherited from interface org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParametersAlgorithm

installUIOverrideParameterEditor, installUIParameterOptions

Methods inherited from interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

deserializeFromJsonNode, emitParameterChangedEvent, emitParameterStructureChangedEvent, emitParameterUIChangedEvent, getContextActions, getParameter, getParameterAccess, getParameterChangedEventEmitter, getParameterStructureChangedEventEmitter, getParameterUIChangedEventEmitter, serializeToJsonFile, serializeToJsonGenerator, serializeToJsonString, setParameter

Methods inherited from interface org.hkijena.jipipe.api.validation.JIPipeValidatable

generateValidityReport

Methods inherited from interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterUIChangedEventListener

onParameterUIChanged

Methods inherited from interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection.ParameterStructureChangedEventListener

onParameterStructureChanged

Field Detail

OUTPUT_SLOT_MATCHED_TEMPLATES

public static final JIPipeDataSlotInfo OUTPUT_SLOT_MATCHED_TEMPLATES

Constructor Detail

MultiTemplateMatchingAlgorithm

public MultiTemplateMatchingAlgorithm(JIPipeNodeInfo info)

MultiTemplateMatchingAlgorithm

public MultiTemplateMatchingAlgorithm(MultiTemplateMatchingAlgorithm other)

Method Detail

runIteration

protected void runIteration(JIPipeMultiIterationStep iterationStep,
                            JIPipeIterationContext iterationContext,
                            JIPipeGraphNodeRunContext runContext,
                            JIPipeProgressInfo progressInfo)

Description copied from class: JIPipeMergingAlgorithm

Runs code on one data row

Specified by:

runIteration in class JIPipeMergingAlgorithm

Parameters:

iterationStep - The data interface

iterationContext - The iteration context

runContext - the run context

progressInfo - the progress from the run

isOutputMatchedTemplates

public boolean isOutputMatchedTemplates()

setOutputMatchedTemplates

public void setOutputMatchedTemplates(boolean outputMatchedTemplates)

isFlipTemplateVertically

public boolean isFlipTemplateVertically()

setFlipTemplateVertically

public void setFlipTemplateVertically(boolean flipTemplateVertically)

isFlipTemplateHorizontally

public boolean isFlipTemplateHorizontally()

setFlipTemplateHorizontally

public void setFlipTemplateHorizontally(boolean flipTemplateHorizontally)

getRotateTemplate

public IntegerRange getRotateTemplate()

setRotateTemplate

public void setRotateTemplate(IntegerRange rotateTemplate)

getTemplateMatchingMethod

public TemplateMatchingMethod getTemplateMatchingMethod()

setTemplateMatchingMethod

public void setTemplateMatchingMethod(TemplateMatchingMethod templateMatchingMethod)

isWithNonMaximaSuppression

public boolean isWithNonMaximaSuppression()

setWithNonMaximaSuppression

public void setWithNonMaximaSuppression(boolean withNonMaximaSuppression)

getExpectedNumberOfObjects

public int getExpectedNumberOfObjects()

setExpectedNumberOfObjects

public boolean setExpectedNumberOfObjects(int expectedNumberOfObjects)

getMultiObjectScoreThreshold

public double getMultiObjectScoreThreshold()

setMultiObjectScoreThreshold

public boolean setMultiObjectScoreThreshold(double multiObjectScoreThreshold)

getMultiObjectMaximumBoundingBoxOverlap

public double getMultiObjectMaximumBoundingBoxOverlap()

setMultiObjectMaximumBoundingBoxOverlap

public boolean setMultiObjectMaximumBoundingBoxOverlap(double multiObjectMaximumBoundingBoxOverlap)

isRestrictToROI

public boolean isRestrictToROI()

setRestrictToROI

public void setRestrictToROI(boolean restrictToROI)

generateRotations

public void generateRotations(JIPipeWorkbench workbench)

isAssembleTemplates

public boolean isAssembleTemplates()

setAssembleTemplates

public void setAssembleTemplates(boolean assembleTemplates)

getAssembleTemplatesBackground

public OptionalColorParameter getAssembleTemplatesBackground()

setAssembleTemplatesBackground

public void setAssembleTemplatesBackground(OptionalColorParameter assembleTemplatesBackground)

getAssembleTemplatesOutput

public OptionalDataInfoRefParameter getAssembleTemplatesOutput()

setAssembleTemplatesOutput

public void setAssembleTemplatesOutput(OptionalDataInfoRefParameter assembleTemplatesOutput)