org.hkijena.jipipe.plugins.ij3d.imageviewer

Class ROIManagerPlugin3D

java.lang.Object

org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin2D

org.hkijena.jipipe.plugins.ij3d.imageviewer.ROIManagerPlugin3D

All Implemented Interfaces:

JIPipeWorkbenchAccess, JIPipeDesktopWorkbenchAccess, org.scijava.Disposable

public class ROIManagerPlugin3D
extends JIPipeDesktopLegacyImageViewerPlugin2D

Constructor Summary

Constructors

Constructor and Description
ROIManagerPlugin3D(JIPipeDesktopLegacyImageViewer viewerPanel)

Method Summary

Modifier and Type	Method and Description
void	addSelectionContextPanel(ROIManagerPlugin3DSelectionContextPanel panel)
JComponent	buildCustomPanel()
void	buildDock(JIPipeDesktopDockPanel dockPanel)
void	buildRibbon(JIPipeDesktopRibbon ribbon)
void	buildStatusBar(JToolBar statusBar)
void	clearROIs()
void	dispose()
void	exportROIsToManager(ROI2DListData rois)
Icon	getPanelIcon() The icon for the category if a new one must be created
JIPipeDesktopDockPanel.PanelLocation	getPanelLocation()
String	getPanelName() The tool panel category where this tool is shown
RoiDrawer	getRoiDrawer()
JList<ROI3D>	getRoiListControl()
ROI3DListData	getRois()
ROI3DListData	getSelectedROIOrAll(String title, String message)
List<ROIManagerPlugin3DSelectionContextPanel>	getSelectionContextPanels()
boolean	isBuildingCustomPanel()
boolean	isFilterListOnlySelected()
void	onImageChanged() Called when the current image is changed
void	onOverlayAdded(Object overlay) Called if an overlay was added
void	onOverlayRemoved(Object overlay) Called if an overlay was removed
void	onOverlaysCleared() Called if the overlays were cleared
void	postprocessDraw(Graphics2D graphics2D, Rectangle renderArea, ImageSliceIndex sliceIndex) Called after the image has been drawn after the image has been drawn
void	postprocessDrawForExport(BufferedImage image, ImageSliceIndex sliceIndex, double magnification) Called while exporting the image slice.
void	removeSelectedROIs()
void	removeSelectionContextPanel(ROIManagerPlugin3DSelectionContextPanel panel)
void	setFilterListOnlySelected(boolean filterListOnlySelected)
void	setRois(ROI3DListData rois)
void	setSelectedROI(Collection<ROI3D> select, boolean force)
void	updateListModel()
void	updateListModel(Collection<ROI3D> excludeFromFilter)

Methods inherited from class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin2D

beforeDraw, draw, getCurrentSlice, getCurrentSlicePosition, getViewerPanel2D, onSliceChanged, uploadSliceToCanvas

Methods inherited from class org.hkijena.jipipe.plugins.imageviewer.legacy.api.JIPipeDesktopLegacyImageViewerPlugin

buildPanel, getCurrentImage, getCurrentImagePlus, getDataSource, getDesktopWorkbench, getViewerPanel, getWorkbench, isActive

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ROIManagerPlugin3D

public ROIManagerPlugin3D(JIPipeDesktopLegacyImageViewer viewerPanel)

Method Detail

getRoiDrawer

public RoiDrawer getRoiDrawer()

onImageChanged

public void onImageChanged()

Description copied from class: JIPipeDesktopLegacyImageViewerPlugin

Called when the current image is changed

Overrides:

onImageChanged in class JIPipeDesktopLegacyImageViewerPlugin

onOverlayAdded

public void onOverlayAdded(Object overlay)

Description copied from class: JIPipeDesktopLegacyImageViewerPlugin

Called if an overlay was added

Overrides:

onOverlayAdded in class JIPipeDesktopLegacyImageViewerPlugin

Parameters:

overlay - the overlay

onOverlayRemoved

public void onOverlayRemoved(Object overlay)

Description copied from class: JIPipeDesktopLegacyImageViewerPlugin

Called if an overlay was removed

Overrides:

onOverlayRemoved in class JIPipeDesktopLegacyImageViewerPlugin

Parameters:

overlay - the overlay

dispose

public void dispose()

onOverlaysCleared

public void onOverlaysCleared()

Description copied from class: JIPipeDesktopLegacyImageViewerPlugin

Called if the overlays were cleared

Overrides:

onOverlaysCleared in class JIPipeDesktopLegacyImageViewerPlugin

isBuildingCustomPanel

public boolean isBuildingCustomPanel()

Overrides:

isBuildingCustomPanel in class JIPipeDesktopLegacyImageViewerPlugin

buildCustomPanel

public JComponent buildCustomPanel()

Overrides:

buildCustomPanel in class JIPipeDesktopLegacyImageViewerPlugin

getSelectedROIOrAll

public ROI3DListData getSelectedROIOrAll(String title,
                                         String message)

getSelectionContextPanels

public List<ROIManagerPlugin3DSelectionContextPanel> getSelectionContextPanels()

addSelectionContextPanel

public void addSelectionContextPanel(ROIManagerPlugin3DSelectionContextPanel panel)

removeSelectionContextPanel

public void removeSelectionContextPanel(ROIManagerPlugin3DSelectionContextPanel panel)

buildRibbon

public void buildRibbon(JIPipeDesktopRibbon ribbon)

Specified by:

buildRibbon in class JIPipeDesktopLegacyImageViewerPlugin

buildDock

public void buildDock(JIPipeDesktopDockPanel dockPanel)

Specified by:

buildDock in class JIPipeDesktopLegacyImageViewerPlugin

buildStatusBar

public void buildStatusBar(JToolBar statusBar)

Specified by:

buildStatusBar in class JIPipeDesktopLegacyImageViewerPlugin

getPanelName

public String getPanelName()

Description copied from class: JIPipeDesktopLegacyImageViewerPlugin

The tool panel category where this tool is shown

Specified by:

getPanelName in class JIPipeDesktopLegacyImageViewerPlugin

Returns:

the category

getPanelLocation

public JIPipeDesktopDockPanel.PanelLocation getPanelLocation()

Specified by:

getPanelLocation in class JIPipeDesktopLegacyImageViewerPlugin

getPanelIcon

public Icon getPanelIcon()

Description copied from class: JIPipeDesktopLegacyImageViewerPlugin

The icon for the category if a new one must be created

Specified by:

getPanelIcon in class JIPipeDesktopLegacyImageViewerPlugin

Returns:

the icon

postprocessDraw

public void postprocessDraw(Graphics2D graphics2D,
                            Rectangle renderArea,
                            ImageSliceIndex sliceIndex)

Description copied from class: JIPipeDesktopLegacyImageViewerPlugin2D

Called after the image has been drawn after the image has been drawn

Overrides:

postprocessDraw in class JIPipeDesktopLegacyImageViewerPlugin2D

Parameters:

graphics2D - the graphics

renderArea - the render area

sliceIndex - the index of the slice

postprocessDrawForExport

public void postprocessDrawForExport(BufferedImage image,
                                     ImageSliceIndex sliceIndex,
                                     double magnification)

Description copied from class: JIPipeDesktopLegacyImageViewerPlugin2D

Called while exporting the image slice. Use this to export items handled by postprocessDraw

Overrides:

postprocessDrawForExport in class JIPipeDesktopLegacyImageViewerPlugin2D

Parameters:

image - the image

sliceIndex - the slice

magnification - the magnification

removeSelectedROIs

public void removeSelectedROIs()

clearROIs

public void clearROIs()

getRois

public ROI3DListData getRois()

setRois

public void setRois(ROI3DListData rois)

exportROIsToManager

public void exportROIsToManager(ROI2DListData rois)

isFilterListOnlySelected

public boolean isFilterListOnlySelected()

setFilterListOnlySelected

public void setFilterListOnlySelected(boolean filterListOnlySelected)

updateListModel

public void updateListModel()

updateListModel

public void updateListModel(Collection<ROI3D> excludeFromFilter)

getRoiListControl

public JList<ROI3D> getRoiListControl()

setSelectedROI

public void setSelectedROI(Collection<ROI3D> select,
                           boolean force)