org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify

Class ChangeRoi3DPropertiesFromExpressionsAlgorithm

java.lang.Object

org.hkijena.jipipe.api.nodes.JIPipeGraphNode

org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

org.hkijena.jipipe.api.nodes.JIPipeParameterSlotAlgorithm

org.hkijena.jipipe.api.nodes.JIPipeSimpleIteratingAlgorithm

org.hkijena.jipipe.extensions.ij3d.nodes.roi3d.modify.ChangeRoi3DPropertiesFromExpressionsAlgorithm

All Implemented Interfaces:

JIPipeFunctionallyComparable, JIPipeValidatable, JIPipeAdaptiveParametersAlgorithm, JIPipeDataBatchAlgorithm, JIPipeParallelizedAlgorithm, JIPipeParameterCollection

public class ChangeRoi3DPropertiesFromExpressionsAlgorithm
extends JIPipeSimpleIteratingAlgorithm

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	ChangeRoi3DPropertiesFromExpressionsAlgorithm.MetadataEntry

Nested classes/interfaces inherited from class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

JIPipeGraphNode.BaseDirectoryChangedEvent, JIPipeGraphNode.Serializer

Nested classes/interfaces inherited from interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

JIPipeParameterCollection.ParameterChangedEvent, JIPipeParameterCollection.ParameterStructureChangedEvent, JIPipeParameterCollection.ParameterUIChangedEvent

Field Summary

Fields inherited from class org.hkijena.jipipe.api.nodes.JIPipeParameterSlotAlgorithm

SLOT_PARAMETERS

Constructor Summary

Constructors

Constructor and Description
ChangeRoi3DPropertiesFromExpressionsAlgorithm(ChangeRoi3DPropertiesFromExpressionsAlgorithm other)
ChangeRoi3DPropertiesFromExpressionsAlgorithm(JIPipeNodeInfo info)

Method Summary

Modifier and Type	Method and Description
OptionalDefaultExpressionParameter	getCenterX()
OptionalDefaultExpressionParameter	getCenterY()
OptionalDefaultExpressionParameter	getCenterZ()
OptionalDefaultExpressionParameter	getChannelLocation()
CustomExpressionVariablesParameter	getCustomVariables()
OptionalDefaultExpressionParameter	getFillColor()
OptionalDefaultExpressionParameter	getFrameLocation()
ROI3DMeasurementSetParameter	getMeasurements()
ParameterCollectionList	getMetadataEntries()
OptionalDefaultExpressionParameter	getRoiComment()
OptionalDefaultExpressionParameter	getRoiName()
boolean	isMeasureInPhysicalUnits()
protected void	runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo) Runs code on one data row
void	setCenterX(OptionalDefaultExpressionParameter centerX)
void	setCenterY(OptionalDefaultExpressionParameter centerY)
void	setCenterZ(OptionalDefaultExpressionParameter centerZ)
void	setChannelLocation(OptionalDefaultExpressionParameter channelLocation)
void	setFillColor(OptionalDefaultExpressionParameter fillColor)
void	setFrameLocation(OptionalDefaultExpressionParameter frameLocation)
void	setMeasureInPhysicalUnits(boolean measureInPhysicalUnits)
void	setMeasurements(ROI3DMeasurementSetParameter measurements)
void	setMetadataEntries(ParameterCollectionList metadataEntries)
void	setRoiComment(OptionalDefaultExpressionParameter roiComment)
void	setRoiName(OptionalDefaultExpressionParameter roiName)

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeSimpleIteratingAlgorithm

createUIInputSlotIconDescriptionMenuItems, generateDataBatchesDryRun, getAdaptiveParameterSettings, getDataBatchGenerationSettings, getGenerationSettingsInterface, getParallelizationBatchSize, isParallelizationEnabled, isParameterUIVisible, isParameterUIVisible, reportValidity, runParameterSet, runPassThrough, setParallelizationEnabled, supportsParallelization

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeParameterSlotAlgorithm

getDataInputSlotCount, getDataInputSlots, getFirstInputSlot, getNonParameterInputSlots, getParameterSlot, getParameterSlotAlgorithmSettings, getUIInputSlotIcon, getUIInputSlotIconBaseDimensions, run

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm

canAutoPassThrough, canPassThrough, functionallyEquals, getThreadPool, isEnabled, isPassThrough, isPostprocessor, isPreprocessor, loadExample, runPassThrough, setEnabled, setPassThrough, setThreadPool

Methods inherited from class org.hkijena.jipipe.api.nodes.JIPipeGraphNode

archiveTo, canUserDelete, clearLocations, clearSlotData, copySlotConfiguration, duplicate, fromJson, fromJsonNode, getAliasIdInParentGraph, getBaseDirectory, getCategory, getCompartmentDisplayName, getCompartmentUUIDInGraphAsString, getCompartmentUUIDInParentGraph, getCustomDescription, getDependencies, getDisplayName, getEventBus, getFirstOutputSlot, getInfo, getInputSlot, getInputSlotMap, getInputSlotOrder, getInputSlots, getInputSlotsWithRole, getInternalStoragePath, getLastInputSlot, getLastOutputSlot, getLocations, getLocationWithin, getName, getNewScratch, getOpenInputSlots, getOutputSlot, getOutputSlotMap, getOutputSlots, getOutputSlotsWithRole, getParentGraph, getProjectCompartment, getProjectDirectory, getScratchBaseDirectory, getSlotConfiguration, getStoragePath, getUUIDInParentGraph, hasInputSlot, hasOutputSlot, isBookmarked, isVisibleIn, onDeserialized, onParameterChanged, onParameterStructureChanged, onParameterUIChanged, onSlotConfigurationChanged, registerSubParameter, renderInputSlots, renderOutputSlots, setBaseDirectory, setBookmarked, setCustomDescription, setCustomName, setInfo, setInternalStoragePath, setLocations, setLocationWithin, setLocationWithin, setParentGraph, setProjectDirectory, setScratchBaseDirectory, setSlotConfiguration, setStoragePath, toggleSlot, toJson, triggerSlotsChangedEvent, updateGraphNodeSlots

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.hkijena.jipipe.api.JIPipeValidatable

generateValidityReport

Methods inherited from interface org.hkijena.jipipe.api.parameters.JIPipeParameterCollection

addParameterChangeListener, addParameterChangeListener, getContextActions, getParameter, getParameterAccess, installUIOverrideParameterEditor, installUIParameterOptions, setParameter, triggerParameterChange, triggerParameterStructureChange, triggerParameterUIChange

Constructor Detail

ChangeRoi3DPropertiesFromExpressionsAlgorithm

public ChangeRoi3DPropertiesFromExpressionsAlgorithm(JIPipeNodeInfo info)

ChangeRoi3DPropertiesFromExpressionsAlgorithm

public ChangeRoi3DPropertiesFromExpressionsAlgorithm(ChangeRoi3DPropertiesFromExpressionsAlgorithm other)

Method Detail

runIteration

protected void runIteration(JIPipeDataBatch dataBatch,
                            JIPipeProgressInfo progressInfo)

Description copied from class: JIPipeSimpleIteratingAlgorithm

Runs code on one data row

Specified by:

runIteration in class JIPipeSimpleIteratingAlgorithm

Parameters:

dataBatch - The data interface

progressInfo - the progress info from the run

getCustomVariables

public CustomExpressionVariablesParameter getCustomVariables()

getRoiName

public OptionalDefaultExpressionParameter getRoiName()

setRoiName

public void setRoiName(OptionalDefaultExpressionParameter roiName)

getRoiComment

public OptionalDefaultExpressionParameter getRoiComment()

setRoiComment

public void setRoiComment(OptionalDefaultExpressionParameter roiComment)

getCenterX

public OptionalDefaultExpressionParameter getCenterX()

setCenterX

public void setCenterX(OptionalDefaultExpressionParameter centerX)

getCenterY

public OptionalDefaultExpressionParameter getCenterY()

setCenterY

public void setCenterY(OptionalDefaultExpressionParameter centerY)

getCenterZ

public OptionalDefaultExpressionParameter getCenterZ()

setCenterZ

public void setCenterZ(OptionalDefaultExpressionParameter centerZ)

getChannelLocation

public OptionalDefaultExpressionParameter getChannelLocation()

setChannelLocation

public void setChannelLocation(OptionalDefaultExpressionParameter channelLocation)

getFrameLocation

public OptionalDefaultExpressionParameter getFrameLocation()

setFrameLocation

public void setFrameLocation(OptionalDefaultExpressionParameter frameLocation)

getFillColor

public OptionalDefaultExpressionParameter getFillColor()

setFillColor

public void setFillColor(OptionalDefaultExpressionParameter fillColor)

getMetadataEntries

public ParameterCollectionList getMetadataEntries()

setMetadataEntries

public void setMetadataEntries(ParameterCollectionList metadataEntries)

getMeasurements

public ROI3DMeasurementSetParameter getMeasurements()

setMeasurements

public void setMeasurements(ROI3DMeasurementSetParameter measurements)

isMeasureInPhysicalUnits

public boolean isMeasureInPhysicalUnits()

setMeasureInPhysicalUnits

public void setMeasureInPhysicalUnits(boolean measureInPhysicalUnits)