public class CLIJCommandNode extends JIPipeIteratingAlgorithm
JIPipeGraphNode.BaseDirectoryChangedEvent, JIPipeGraphNode.Serializer
JIPipeParameterCollection.ParameterChangedEvent, JIPipeParameterCollection.ParameterStructureChangedEvent, JIPipeParameterCollection.ParameterUIChangedEvent
SLOT_PARAMETERS
Constructor and Description |
---|
CLIJCommandNode(CLIJCommandNode other) |
CLIJCommandNode(JIPipeNodeInfo info) |
Modifier and Type | Method and Description |
---|---|
JIPipeDynamicParameterCollection |
getClijParameters() |
boolean |
isAvoidGPUMemory() |
void |
run(JIPipeProgressInfo progressInfo)
Runs the workload
|
protected void |
runIteration(JIPipeDataBatch dataBatch,
JIPipeProgressInfo progressInfo)
Runs code on one data row
|
void |
setAvoidGPUMemory(boolean avoidGPUMemory) |
createUIInputSlotIconDescriptionMenuItems, generateDataBatchesDryRun, getAdaptiveParameterSettings, getDataBatchGenerationSettings, getGenerationSettingsInterface, getParallelizationBatchSize, isParallelizationEnabled, isParameterUIVisible, isParameterUIVisible, runParameterSet, runPassThrough, setParallelizationEnabled, supportsParallelization
getDataInputSlotCount, getDataInputSlots, getFirstInputSlot, getNonParameterInputSlots, getParameterSlot, getParameterSlotAlgorithmSettings, getUIInputSlotIcon, getUIInputSlotIconBaseDimensions
canAutoPassThrough, canPassThrough, functionallyEquals, getThreadPool, isEnabled, isPassThrough, isPostprocessor, isPreprocessor, loadExample, reportValidity, runPassThrough, setEnabled, setPassThrough, setThreadPool
archiveTo, canUserDelete, clearLocations, clearSlotData, copySlotConfiguration, duplicate, fromJson, fromJsonNode, getAliasIdInParentGraph, getBaseDirectory, getCategory, getCompartmentDisplayName, getCompartmentUUIDInGraphAsString, getCompartmentUUIDInParentGraph, getCustomDescription, getDependencies, getDisplayName, getEventBus, getFirstOutputSlot, getInfo, getInputSlot, getInputSlotMap, getInputSlotOrder, getInputSlots, getInputSlotsWithRole, getInternalStoragePath, getLastInputSlot, getLastOutputSlot, getLocations, getLocationWithin, getName, getNewScratch, getOpenInputSlots, getOutputSlot, getOutputSlotMap, getOutputSlots, getOutputSlotsWithRole, getParentGraph, getProjectCompartment, getProjectDirectory, getScratchBaseDirectory, getSlotConfiguration, getStoragePath, getUUIDInParentGraph, hasInputSlot, hasOutputSlot, isBookmarked, isVisibleIn, onDeserialized, onParameterChanged, onParameterStructureChanged, onParameterUIChanged, onSlotConfigurationChanged, registerSubParameter, renderInputSlots, renderOutputSlots, setBaseDirectory, setBookmarked, setCustomDescription, setCustomName, setInfo, setInternalStoragePath, setLocations, setLocationWithin, setLocationWithin, setParentGraph, setProjectDirectory, setScratchBaseDirectory, setSlotConfiguration, setStoragePath, toggleSlot, toJson, triggerSlotsChangedEvent, updateGraphNodeSlots
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
generateValidityReport
addParameterChangeListener, addParameterChangeListener, getContextActions, getParameter, getParameterAccess, installUIOverrideParameterEditor, installUIParameterOptions, setParameter, triggerParameterChange, triggerParameterStructureChange, triggerParameterUIChange
public CLIJCommandNode(JIPipeNodeInfo info)
public CLIJCommandNode(CLIJCommandNode other)
public boolean isAvoidGPUMemory()
public void setAvoidGPUMemory(boolean avoidGPUMemory)
public JIPipeDynamicParameterCollection getClijParameters()
public void run(JIPipeProgressInfo progressInfo)
JIPipeGraphNode
run
in class JIPipeParameterSlotAlgorithm
progressInfo
- progress passed from the runnerprotected void runIteration(JIPipeDataBatch dataBatch, JIPipeProgressInfo progressInfo)
JIPipeIteratingAlgorithm
runIteration
in class JIPipeIteratingAlgorithm
dataBatch
- The data interfaceprogressInfo
- the progress info from the runCopyright © 2020–2023 Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute (HKI). All rights reserved.