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Macro programming for everyone!

JIPipe is a visual programming language for ImageJ that allows you to create macros without any programming by just creating a flowchart!

Read the current preprint Supplementary information

Learn how to use it Show examples

Do you have a question or require some help?

Please do not hesitate to contact us! You can always contact the JIPipe developers via the community, or via E-Mail. If you find a bug, you can also report it directly on GitHub. Community Send E-Mail Report a bug

JIPipe was developed by Research Group Applied Systems Biology
Head: Prof. Dr. Marc Thilo Figge HKI-Center for Systems Biology of Infection
Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Insitute (HKI)
Adolf-Reichwein-Straße 23, 07745 Jena, Germany